Pregenerated sensors for POU1F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004842Ensembl transcript IDs: ENSMUST00000004964.15, ENSMUST00000176038.8, ENSMUST00000176330.8, ENSMUST00000184525.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTaGGTGTTAGGTGCAGAGGCGGAATTGGAAGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: VCWLPSQLALPH*VLGAEAELEGV Trigger: CACCCCTTCCAATTCCGCCTCTGCACCTAACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAAGGCCGCGGGGTCCTCTaGCAGCAGAGGCTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYEGRGVL*QQRLVQ Trigger: CTGCACCAGCCTCTGCTGGCAGAGGACCCCGCGGCC...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR TCA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTCTTCAGCCATCCGCATaGTCTCCTGCGAGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IFTCVLASLPVSTTSLSVLQPSA*SPARKA Trigger: AGCCTTCCTCGCAGGAGATCATGCGGATGGCTGAAG...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTCACTCAGCGGCACTGTaGTGCATTCTCAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IFTCVLASLPVSTTSLSVHSAAL*CILRGR Trigger: CCTGCCTCTGAGAATGCACCACAGTGCCGCTGAGTG...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTTTCCGCCTGAGTTCCTaGTTAAACTCAGAGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: IFTCVLASLPVSTTSLSVFRLSS*LNSEAA Trigger: CGCGGCCTCTGAGTTTAAGCAGGAACTCAGGCGGAA...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTATCCGCATGATCTCCTaGGAGGAAGGCTTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFTCVLASLPVSTTSLSVIRMIS*EEGLLC Trigger: GCACAGCAAGCCTTCCTCGCAGGAGATCATGCGGAT...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAATCAGCGGCACTGTGGTaGATTCTCAGAGGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYESAALW*ILRGRA Trigger: TGCCCTGCCTCTGAGAATGCACCACAGTGCCGCTGA...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR TCA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTAGATGGTTGTTTGACTaGATTCTGAGCCGTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IFTCVLASLPVSTTSLSVRWLFD*ILSRGQ Trigger: CTGTCCACGGCTCAGAATTCAGTCAAACAACCATCT...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAACTCTCTGCCTTCGGTTaGAGAACCACACTCGTACTA | + |
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Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYELSAFG*RTTLVL Trigger: TAGTACGAGTGTGGTTCTGCAACCGAAGGCAGAGAG...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR TCA 90 bp | GACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAATTCTGGGAACAATGTTTGACTGAATTCTaGGCCGTGGACAGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: DFPGSVLDESERYEFWEQCLTEF*AVDSSQ Trigger: CTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACA...TTGTTCCCAGAATTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTGGATGAAAGTGAACGCTATGAATTCTGGGAACAACTAGATAAAATGCCTGCGAGGAAGGCTTaGTGTGCTCCCCGAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLDESERYEFWEQLDKMPARKA*CAPRSV Trigger: GACACTTCGGGGAGCACAGCAAGCCTTCCTCGCAGG...CATTTTATCTAGTTGTTCCCAGAATTCATAGCGTTCACTTTCATCCAAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAAACTCGTTTTTCTCTCTaGCTTCGGTTGCAGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYETRFSL*LRLQNH Trigger: GTGGTTCTGCAACCGAAGGCAGAGAGAAAAACGAGT...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAACCATCACTCCATAGGTaGATGGCTGGTTTCCATAAT | + |
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Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYEPSLHR*MAGFHN Trigger: ATTATGGAAACCAGCCATCCACCTATGGAGTGATGG...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACAGTTCTCGGATTTCTaGGGAGTCCATGTCTATTGG | + |
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Preference number: 4 (lower is better) Translates to: GNCKLLYSHVCWLPSQLAQFSDF*GVHVYW Trigger: CCAATAGACATGGACTCCCCAGAAATCCGAGAACTG...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCAACTCAGGGTGTGGTCTaGAAACTTGTAAAGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNCKLLYSHVCWLPSQLATQGVV*KLVKTR Trigger: CCTTGTCTTTACAAGTTTCCAGACCACACCCTGAGT...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCAGGAGTCCATGTCTATTaGCTCTTCCACCAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNCKLLYSHVCWLPSQLAGVHVY*LFHQFA Trigger: AGCAAATTGGTGGAAGAGCCAATAGACATGGACTCC...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR TCA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCAAGAACAGGCTCTGATTaGGACTTGTTTTCACTCGTT | + |
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Preference number: 4 (lower is better) Translates to: GNCKLLYSHVCWLPSQLARTGSD*DLFSLV Trigger: AACGAGTGAAAACAAGTCTCAATCAGAGCCTGTTCT...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR TCA 90 bp | GGTGTTGTGAGGGACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAAATAGAGAACAGGCTCTaGTTGAGACTTGTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GVVRDFPGSVLDESERYEIENRL*LRLVFT Trigger: AGTGAAAACAAGTCTCAATCAGAGCCTGTTCTCTAT...TTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR GCA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCAATCGAGAAATACGTGTaGAAACATGTAGGAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GNCKLLYSHVCWLPSQLAIEKYV*KHVGVW Trigger: CCAAACTCCTACATGTTTGCACACGTATTTCTCGAT...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CCA 90 bp | AGTGTTTTGGATGAAAGTGAACGCTATGAATTCTGGGAACAACTAGATAAAATGCACTCCATAGGTGGATaGCTGGTTTCCATAATGACA | + |
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Preference number: 4 (lower is better) Translates to: SVLDESERYEFWEQLDKMHSIGG*LVSIMT Trigger: TGTCATTATGGAAACCAGCCATCCACCTATGGAGTG...CATTTTATCTAGTTGTTCCCAGAATTCATAGCGTTCACTTTCATCCAAAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS CCA 90 bp | ACGTTGGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTaGTGCATTCTCAGAGGCAGGGCAGCAGAAGCGTCAGAATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLVAWLEAGRHSAAL*CILRGRAAEASEFR Trigger: TCTGAATTCTGACGCTTCTGCTGCCCTGCCTCTGAGAATGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 |
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| CDS GCA 90 bp | TTGGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGGTaGATTCTCAGAGGCAGGGCAGCAGAAGCGTCAGAATTCAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: LVAWLEAGRHSAALW*ILRGRAAEASEFRV Trigger: AACTCTGAATTCTGACGCTTCTGCTGCCCTGCCTCTGAGAATGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 |
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| CDS CCA 90 bp | AAGGCACAGAGTAATGAAGTCCTGTCGCTGTGGACATCACGTTGGTaGCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: KAQSNEVLSLWTSRW*RGWRLGDTQRHCGA Trigger: TGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGCGACAGGACTTCATTACTCTGTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176330.8 |
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| CDS CCA 90 bp | AGGAAGGCACAGAGTAATGAAGTCCTGTCGCTGTGGACATCACGTTaGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RKAQSNEVLSLWTSR*WRGWRLGDTQRHCG Trigger: ACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGCGACAGGACTTCATTACTCTGTGCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176330.8 |
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| CDS CCA 90 bp | ATCAAAGACAAAATAGACGGGACTGTGGACATCACGTTGGTGGCGTaGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGGTGCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: IKDKIDGTVDITLVA*LEAGRHSAALWCIL Trigger: GAGAATGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGTCCCGTCTATTTTGTCTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 |
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| CDS TCA 90 bp | GAGCTGCAAGTTTTCAAATCGACAGATGGTTGTTTGACTGAATTCTaGGCCGTGGACAGCAGCCAGCGCTTCGCCCACGTTTGTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: ELQVFKSTDGCLTEF*AVDSSQRFAHVCLG Trigger: ACCCAGACAAACGTGGGCGAAGCGCTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACAACCATCTGTCGATTTGAAAACTTGCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS TCA 90 bp | CTCGTACTACTTCTTTCTCGAGATTCAGTTCTTCAGCCATCCGCATaGTCTCCTGCGAGGAAGGCTTGCTGTGCTCCCCGAAGTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVLLLSRDSVLQPSA*SPARKACCAPRSVS Trigger: AGAGACACTTCGGGGAGCACAGCAAGCCTTCCTCGCAGGAGATCATGCGGATGGCTGAAGAACTGAATCTCGAGAAAGAAGTAGTACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS-3UTR CAA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTGGCTCTTCCACCAATTaGCTTTTCCGCCTGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: IFTCVLASLPVSTTSLSVGSSTN*LFRLSS Trigger: GGAACTCAGGCGGAAAAGCAAATTGGTGGAAGAGCC...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CAA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTTCTCTCTGCCTTCGGTaGCAGAACCACACTCGTACT | + |
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Preference number: 5 (lower is better) Translates to: IFTCVLASLPVSTTSLSVSLCLR*QNHTRT Trigger: AGTACGAGTGTGGTTCTGCAACCGAAGGCAGAGAGA...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS TCA 90 bp | TTTTTGAAACTGAGCTGCAAGTTTTCAAATCGACAGATGGTTGTTTaGCTGAATTCTGAGCCGTGGACAGCAGCCAGCGCTTCGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: FLKLSCKFSNRQMVV*LNSEPWTAASASPT Trigger: CGTGGGCGAAGCGCTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACAACCATCTGTCGATTTGAAAACTTGCAGCTCAGTTTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 90 bp | GGCAAACTGCTCCAGTTCTCGGATTTCTGGGGAGTCCATGTCTATTaGCTCTTCCACCAATTTGCTTTTCCGCCTGAGTTCCTGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: GKLLQFSDFWGVHVY*LFHQFAFPPEFLLK Trigger: TTTAAGCAGGAACTCAGGCGGAAAAGCAAATTGGTGGAAGAGCCAATAGACATGGACTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 90 bp | AATTCTGAGCCGTGGACAGCAGCCAGCGCTTCGCCCACGTTTGTCTaGGTGTATCCTAACTTAATTCTTCTCACTTTAAACTCGTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: NSEPWTAASASPTFV*VYPNLILLTLNSLA Trigger: TGCCAACGAGTTTAAAGTGAGAAGAATTAAGTTAGGATACACCCAGACAAACGTGGGCGAAGCGCTGGCTGCTGTCCACGGCTCAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS-3UTR CAA 90 bp | GACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAATTCTGGGAACAAACGTTGGTGGCGTGGTaGGAGGCTGGGAGACACTCA | + |
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Preference number: 5 (lower is better) Translates to: DFPGSVLDESERYEFWEQTLVAW*EAGRHS Trigger: TGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGT...TTGTTCCCAGAATTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS CCA 90 bp | TCTCACTTTAAACTCGTTGGCAAACTGCTCCAGTTCTCGGATTTCTaGGGAGTCCATGTCTATTGGCTCTTCCACCAATTTGCTTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SHFKLVGKLLQFSDF*GVHVYWLFHQFAFP Trigger: CGGAAAAGCAAATTGGTGGAAGAGCCAATAGACATGGACTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCCAACGAGTTTAAAGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS-3UTR CAA 90 bp | ATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCACTACCTCACTGAGTGTTGCTTCCTCCAGCCACTaGGATAAAATTGCTTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: IFTCVLASLPVSTTSLSVASSSH*DKIALS Trigger: ACTCAAAGCAATTTTATCCAAGTGGCTGGAGGAAGC...AACACTCAGTGAGGTAGTGCTAACTGGGAGGGAAGCCAGCACACATGTGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS CCA 90 bp | CCCATCGTTGTCATCGAGAAATACGTGTGCAAACATGTAGGAGTTTaGATCAAAGACAAAATAGACGGGACTGTGGACATCACGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PIVVIEKYVCKHVGV*IKDKIDGTVDITLV Trigger: CACCAACGTGATGTCCACAGTCCCGTCTATTTTGTCTTTGATCCAAACTCCTACATGTTTGCACACGTATTTCTCGATGACAACGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 |
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| CDS-3UTR CAA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCAGGGAGTCCATGTCTATaGGCTCTTCCACCAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: GNCKLLYSHVCWLPSQLAGSPCL*ALPPIC Trigger: GCAAATTGGTGGAAGAGCCAATAGACATGGACTCCC...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS-3UTR CAA 90 bp | GGAAATTGTAAACTACTATATTCACATGTGTGCTGGCTTCCCTCCCAGTTAGCATCCTCTTCCTTTCGTTaGCTCCCACCTTCTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: GNCKLLYSHVCWLPSQLASSSFR*LPPSHC Trigger: ACAATGAGAAGGTGGGAGCAAACGAAAGGAAGAGGA...TGCTAACTGGGAGGGAAGCCAGCACACATGTGAATATAGTAGTTTACAATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS GCA 90 bp | AGTCCTGTCGCTGTATTTCCCATCGTTGTCATCGAGAAATACGTGTaGAAACATGTAGGAGTTTGGATCAAAGACAAAATAGACGGGACT | + |
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Preference number: 5 (lower is better) Translates to: SPVAVFPIVVIEKYV*KHVGVWIKDKIDGT Trigger: AGTCCCGTCTATTTTGTCTTTGATCCAAACTCCTACATGTTTGCACACGTATTTCTCGATGACAACGATGGGAAATACAGCGACAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000184525.2 |
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| CDS GCA 90 bp | GTGTATCCTAACTTAATTCTTCTCACTTTAAACTCGTTGGCAAACTaGTCCAGTTCTCGGATTTCTGGGGAGTCCATGTCTATTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VYPNLILLTLNSLAN*SSSRISGESMSIGS Trigger: AGAGCCAATAGACATGGACTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCCAACGAGTTTAAAGTGAGAAGAATTAAGTTAGGATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 90 bp | CCCATCGTTGTCATCGAGAAATACGTGTGCAAACATGTAGGAGTTTaGATCAAAGACAAAATAGACGGGACTGGTAAGAAAATGTACGAG | + |
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Preference number: 5 (lower is better) Translates to: PIVVIEKYVCKHVGV*IKDKIDGTGKKMYE Trigger: CTCGTACATTTTCTTACCAGTCCCGTCTATTTTGTCTTTGATCCAAACTCCTACATGTTTGCACACGTATTTCTCGATGACAACGATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184525.2 |
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| CDS-3UTR CAA 90 bp | GACTTTCCTGGTAGTGTTTTGGATGAAAGTGAACGCTATGAATTCTGGGAACAACTCACTTTAAACTCGTaGGCAAACTGCTCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DFPGSVLDESERYEFWEQLTLNS*ANCSSS Trigger: AGAACTGGAGCAGTTTGCCAACGAGTTTAAAGTGAG...TTGTTCCCAGAATTCATAGCGTTCACTTTCATCCAAAACACTACCAGGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004964.15 |
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| CDS CCA 72 bp | GCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTaGTGCATTCTCAGAGGCAGGGCAGCAGAAGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: AWLEAGRHSAAL*CILRGRAAEAS Trigger: TGACGCTTCTGCTGCCCTGCCTCTGAGAATGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 |
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| CDS GCA 72 bp | TGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGGTaGATTCTCAGAGGCAGGGCAGCAGAAGCGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WLEAGRHSAALW*ILRGRAAEASE Trigger: TTCTGACGCTTCTGCTGCCCTGCCTCTGAGAATGCACCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 |
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| CDS CCA 72 bp | CAGAGTAATGAAGTCCTGTCGCTGTGGACATCACGTTaGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: QSNEVLSLWTSR*WRGWRLGDTQR Trigger: CCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGCGACAGGACTTCATTACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176330.8 |
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| CDS CAA 90 bp | GGAGTTTGGATCAAAGACAAAATAGACGGGACTGTGGACATCACGTaGGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCGGCACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GVWIKDKIDGTVDIT*VAWLEAGRHSAALW Trigger: CCACAGTGCCGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGTCCCGTCTATTTTGTCTTTGATCCAAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 |
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| CDS GCA 72 bp | TCGAGATTCAGTTCTTCAGCCATCCGCATGATCTCCTaGGAGGAAGGCTTGCTGTGCTCCCCGAAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRFSSSAIRMIS*EEGLLCSPKCL Trigger: GAGACACTTCGGGGAGCACAGCAAGCCTTCCTCGCAGGAGATCATGCGGATGGCTGAAGAACTGAATCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS TCA 72 bp | CTTCTTTCTCGAGATTCAGTTCTTCAGCCATCCGCATaGTCTCCTGCGAGGAAGGCTTGCTGTGCTCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: LLSRDSVLQPSA*SPARKACCAPR Trigger: TCGGGGAGCACAGCAAGCCTTCCTCGCAGGAGATCATGCGGATGGCTGAAGAACTGAATCTCGAGAAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CAA 72 bp | ATCAAAGACAAAATAGACGGGACTGTGGACATCACGTaGGTGGCGTGGTTGGAGGCTGGGAGACACTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: IKDKIDGTVDIT*VAWLEAGRHSA Trigger: CGCTGAGTGTCTCCCAGCCTCCAACCACGCCACCAACGTGATGTCCACAGTCCCGTCTATTTTGTCTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 |
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| CDS TCA 72 bp | GTTTTCAAATCGACAGATGGTTGTTTGACTGAATTCTaGGCCGTGGACAGCAGCCAGCGCTTCGCCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: VFKSTDGCLTEF*AVDSSQRFAHV Trigger: AACGTGGGCGAAGCGCTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACAACCATCTGTCGATTTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS TCA 72 bp | GCTGCAAGTTTTCAAATCGACAGATGGTTGTTTGACTaGATTCTGAGCCGTGGACAGCAGCCAGCGCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: AASFQIDRWLFD*ILSRGQQPALR Trigger: GCGAAGCGCTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACAACCATCTGTCGATTTGAAAACTTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS TCA 72 bp | CTGAGCTGCAAGTTTTCAAATCGACAGATGGTTGTTTaGCTGAATTCTGAGCCGTGGACAGCAGCCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LSCKFSNRQMVV*LNSEPWTAASA Trigger: AGCGCTGGCTGCTGTCCACGGCTCAGAATTCAGTCAAACAACCATCTGTCGATTTGAAAACTTGCAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 72 bp | CTCCAGTTCTCGGATTTCTGGGGAGTCCATGTCTATTaGCTCTTCCACCAATTTGCTTTTCCGCCTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LQFSDFWGVHVY*LFHQFAFPPEF Trigger: GAACTCAGGCGGAAAAGCAAATTGGTGGAAGAGCCAATAGACATGGACTCCCCAGAAATCCGAGAACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 72 bp | CCGTGGACAGCAGCCAGCGCTTCGCCCACGTTTGTCTaGGTGTATCCTAACTTAATTCTTCTCACTTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: PWTAASASPTFV*VYPNLILLTLN Trigger: GTTTAAAGTGAGAAGAATTAAGTTAGGATACACCCAGACAAACGTGGGCGAAGCGCTGGCTGCTGTCCACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CCA 72 bp | AAACTCGTTGGCAAACTGCTCCAGTTCTCGGATTTCTaGGGAGTCCATGTCTATTGGCTCTTCCACCAATTT | + |
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Preference number: 6 (lower is better) Translates to: KLVGKLLQFSDF*GVHVYWLFHQF Trigger: AAATTGGTGGAAGAGCCAATAGACATGGACTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCCAACGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CAA 90 bp | TTTGTCTGGGTGTATCCTAACTTAATTCTTCTCACTTTAAACTCGTaGGCAAACTGCTCCAGTTCTCGGATTTCTGGGGAGTCCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: FVWVYPNLILLTLNS*ANCSSSRISGESMS Trigger: AGACATGGACTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCCAACGAGTTTAAAGTGAGAAGAATTAAGTTAGGATACACCCAGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CAA 72 bp | GTGTATCCTAACTTAATTCTTCTCACTTTAAACTCGTaGGCAAACTGCTCCAGTTCTCGGATTTCTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VYPNLILLTLNS*ANCSSSRISGE Trigger: CTCCCCAGAAATCCGAGAACTGGAGCAGTTTGCCAACGAGTTTAAAGTGAGAAGAATTAAGTTAGGATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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| CDS CAA 90 bp | TTCTCATTGTACAAAGCTCCGACCTGCTCAGCTTCCTCCAGCCACTaGGATAAAATTGCTTTGAGTTTACAAGCATTTTTGAAACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FSLYKAPTCSASSSH*DKIALSLQAFLKLS Trigger: GCTCAGTTTCAAAAATGCTTGTAAACTCAAAGCAATTTTATCCAAGTGGCTGGAGGAAGCTGAGCAGGTCGGAGCTTTGTACAATGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004964.15 ENSMUST00000176038.8 ENSMUST00000176330.8 ENSMUST00000184525.2 |
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