Pregenerated sensors for POT1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024174Ensembl transcript IDs: ENSMUST00000086876.7, ENSMUST00000233557.2, ENSMUST00000233802.2, ENSMUST00000233972.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGCAACCTGCCGTCCTCCTTGGCCTTCAGTGGTCCAGACCTCTaGGTCATACAATGGTGTATCTTGCAGCTTGCAGTCTGGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: DSNLPSSLAFSGPDL*VIQWCILQLAVWGC Trigger: ACAGCCCCAGACTGCAAGCTGCAAGATACACCATTGTATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTTGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | TCACAGAGCCGGCCTCCTTCGATCAAAACCAGACATTCACTTGAGTaGGGAAGGACGCCGTCATTCTTTACAAAATGGACAGCAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: SQSRPPSIKTRHSLE*GRTPSFFTKWTATC Trigger: GCAGGTTGCTGTCCATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCGGCTCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | CATAGCCTCAGTAATAGTGTCAGGCCTTGGGACCTCCCTTTGAGCTaGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: HSLSNSVRPWDLPLS*IPFWTCHWIFFSSG Trigger: GCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCTGACACTATTACTGAGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | ACGCCGTCATTCTTTACAAAATGGACAGCAACCTGCCGTCCTCCTTaGCCTTCAGTGGTCCAGACCTCTGAGTCATACAATGGTGTATCT | + |
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Preference number: 1 (lower is better) Translates to: TPSFFTKWTATCRPP*PSVVQTSESYNGVS Trigger: AGATACACCATTGTATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTTGCTGTCCATTTTGTAAAGAATGACGGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | TGCTCCATAGCCTCAGTAATAGTGTCAGGCCTTGGGACCTCCCTTTaGGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: CSIASVIVSGLGTSL*AGSHFGLVTGSSFP Trigger: AGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCTGACACTATTACTGAGGCTATGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | AATAGTGTCAGGCCTTGGGACCTCCCTTTGAGCTGGATCCCATTTTaGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCCTCTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: NSVRPWDLPLSWIPF*TCHWIFFSSGSSPF Trigger: AAATGGAGAGGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCTGACACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | CCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTaGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTC | + |
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Preference number: 1 (lower is better) Translates to: PGSPLLYVCWGSHIS*CTVVCLVVQCLRDL Trigger: GAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | GATTTCACAGAGCCGGCCTCCTTCGATCAAAACCAGACATTCACTTaGGTGAGGAAGGACGCCGTCATTCTTTACAAAATGGACAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: DFTEPASFDQNQTFT*VRKDAVILYKMDSN Trigger: GTTGCTGTCCATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCGGCTCTGTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR GCA 90 bp | TTCACTAGCCTCCTATTTCCTGAGGTTGCCTGTTTTCATTCTTTCTaGTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAG | + |
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Preference number: 1 (lower is better) Translates to: FTSLLFPEVACFHSF*WPLGLQFFSLTQYQ Trigger: CTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGAATGAAAACAGGCAACCTCAGGAAATAGGAGGCTAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR GCA 90 bp | CCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGGTTGGGTaGAGATATCTGAATCTGACTCTTTCAGCTGCCTGTTGGTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PNSTTGVSCFCPLVG*RYLNLTLSAACWSF Trigger: GAAAGACCAACAGGCAGCTGAAAGAGTCAGATTCAGATATCTGCACCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR GCA 90 bp | TGGCCTTCAGTGGTCCAGACCTCTGAGTCATACAATGGTGTATCTTaGAGCTTGCAGTCTGGGGCTGTAGCTGTAGCATCTTGTAAAATT | + |
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Preference number: 1 (lower is better) Translates to: WPSVVQTSESYNGVS*SLQSGAVAVASCKI Trigger: AATTTTACAAGATGCTACAGCTACAGCCCCAGACTGCAAGCTGCAAGATACACCATTGTATGACTCAGAGGTCTGGACCACTGAAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | ACTAGCCTCCTATTTCCTGAGGTTGCCTGTTTTCATTCTTTCTGCTaGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATC | + |
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Preference number: 1 (lower is better) Translates to: TSLLFPEVACFHSFC*PLGLQFFSLTQYQI Trigger: GATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGAATGAAAACAGGCAACCTCAGGAAATAGGAGGCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | ATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAGAGATGTaGCTGTGGGATGGCAACCCCATCCCTCACTTGATGTTCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: IPVILSDRKNYGSEM*LWDGNPIPHLMFCL Trigger: AAGACAGAACATCAAGTGAGGGATGGGGTTGCCATCCCACAGTCACATCTCTGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | TGTTCCACTTGTGACGTTGTAGGACTTGATGAGGCACTCCAGCCATaGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCAT | + |
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Preference number: 1 (lower is better) Translates to: CSTCDVVGLDEALQP*VRIYFYSWRTNDIH Trigger: ATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGCCTCATCAAGTCCTACAACGTCACAAGTGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | CAGACTGAGGAAGTCTTCTGGGCTTGTATGATCTTAGCTTTGCTCTaGTACGATACTGTCGAGGAGCTCTTTGCTTCAAAATGTCACACA | + |
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Preference number: 1 (lower is better) Translates to: QTEEVFWACMILALL*YDTVEELFASKCHT Trigger: TGTGTGACATTTTGAAGCAAAGAGCTCCTCGACAGTATCGTATCAGAGCAAAGCTAAGATCATACAAGCCCAGAAGACTTCCTCAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR GCA 90 bp | GCCACCCACCCACTACACACAACAGCAGCGCTAGATGATGTCTTCTaGAATCATGGTGTCAAATATCTGGTAACATATTTGATGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: ATHPLHTTAALDDVF*NHGVKYLVTYLMFC Trigger: ACAGAACATCAAATATGTTACCAGATATTTGACACCATGATTGCAGAAGACATCATCTAGCGCTGCTGTTGTGTGTAGTGGGTGGGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CCA 90 bp | CTTGATGAGGCACTCCAGCCATGGGTGCGCATCTATTTTTATTCCTaGAGGACAAATGACATTCATGATCTGTTCCAGATTTCTCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LDEALQPWVRIYFYS*RTNDIHDLFQISLK Trigger: CTTCAGAGAAATCTGGAACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGCCTCATCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR TCA 90 bp | ATTCCTGGAGGACAAATGACATTCATGATCTGTTCCAGATTTCTCTaGAGGTCATCATCAGTAAGGACTTCTGATGCTGGGATCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: IPGGQMTFMICSRFL*RSSSVRTSDAGIWK Trigger: TTTCCAGATCCCAGCATCAGAAGTCCTTACTGATGATGACCTTCAGAGAAATCTGGAACAGATCATGAATGTCATTTGTCCTCCAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCCTCTCCATCCCCACCATCCACCCTaGCTGCTCCACACCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: GSHFGLVTGSSFPQAPLHPHHPP*LLHTPH Trigger: ATGTGGGGTGTGGAGCAGTCAGGGTGGATGGTGGGG...ATGGAGAGGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGACCCCATCCCTCACTTaGTGTTCTGTCTTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QTWKSSTVCVLGVSYQLVTPSLT*CSVFLL Trigger: CAGCAGGAAGACAGAACATCAAGTGAGGGATGGGGT...CACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCTCCTTGGCCTTCAGTaGTCCAGACCTCTGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSLLGLQ*SRPLSH Trigger: ATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAG...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CAA 90 bp | GTGCTCCATAGCCTCAGTAATAGTGTCAGGCCTTGGGACCTCCCTTaGAGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VLHSLSNSVRPWDLP*SWIPFWTCHWIFFS Trigger: GGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCTGACACTATTACTGAGGCTATGGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGACAACAGGGGTCAGCTaGTTCTGTCCATTGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRTTGVS*FCPLVG Trigger: CCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGT...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCAACCCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATCTGATGCTGGGATCTaGAAAAACTTCTCAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: WQPHPSLDVLSSCWWWALSDAGI*KNFSES Trigger: GGATTCTGAGAAGTTTTTCCAGATCCCAGCATCAGA...TAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGGGTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CAA 90 bp | TCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATaGGTTGGGTGCAGATATCTGAATCTGACTCTTTCAGCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SAFPNSTTGVSCFCP*VGCRYLNLTLSAAC Trigger: ACAGGCAGCTGAAAGAGTCAGATTCAGATATCTGCACCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTCTCCCTCTCCACTTGTaGTTGCTTTCTTCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSLPLHL*LLSSLS Trigger: GGAGAGAGAAGAAAGCAATCACAAGTGGAGAGGGAG...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCTTAGGTCCCTTTTTGTaGGTGCTCCATAGCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SFCWPLGLQFFSLTQYQILGPFL*VLHSLS Trigger: ACTGAGGCTATGGAGCACTCACAAAAAGGGACCTAA...GATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTAGACATTCACTTGAGTaGGGAAGGACGCCGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSRHSLE*GRTPSF Trigger: GAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCT...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTAGCTGGATCCCATTTTaGACTTGTCACTGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLALRASVLFPHPIPDQVSWIPF*TCHWIF Trigger: GAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCT...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGCTCCCTCTCCACTTGTaGTTGCTTTCTTCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: YRITLLLSFFQPSLIQQQLPLHL*LLSSLS Trigger: GGAGAGAGAAGAAAGCAATCACAAGTGGAGAGGGAG...CTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTTGCATCATCTCTGAATaGACAGACCTGGAAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSCIISE*TDLEVL Trigger: GAGGACTTCCAGGTCTGTTCATTCAGAGATGATGCA...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTAATGCCCAGAACTTCTaGCACAGAGGAAGGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSNAQNF*HRGRNP Trigger: TGGATTCCTTCCTCTGTGGCAGAAGTTCTGGGCATT...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTAGCTGGATCCCATTTTaGACTTGTCACTGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: WSSYRITLLLSFFQPSLISWIPF*TCHWIF Trigger: GAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCT...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCACTGAGGAAGTCTTCTaGGCTTGTATGATCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFTEEVF*ACMILA Trigger: AGCTAAGATCATACAAGCCCAGAAGACTTCCTCAGT...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR CAA 90 bp | AGATTTCACAGAGCCGGCCTCCTTCGATCAAAACCAGACATTCACTaGAGTGAGGAAGGACGCCGTCATTCTTTACAAAATGGACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RFHRAGLLRSKPDIH*SEEGRRHSLQNGQQ Trigger: TTGCTGTCCATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCGGCTCTGTGAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAAACCAGACATTCACTTaGGTGAGGAAGGACGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LLSISIPVILSDRKNYGSNQTFT*VRKDAV Trigger: GACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTT...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCTCTCCCAAGTAAAATaGAAGAGGATGAAAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSLSQVK*KRMKER Trigger: CCTTTCTTTCATCCTCTTCCATTTTACTTGGGAGAG...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCCTGAATGAACAGACCTaGAAGTCCTCTACTGTATGT | + |
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Preference number: 2 (lower is better) Translates to: SFCWPLGLQFFSLTQYQILNEQT*KSSTVC Trigger: ACATACAGTAGAGGACTTCCAGGTCTGTTCATTCAG...GATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGATCAGTAAGGACTTCTaGTGCTGGGATCTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: EVLYCMCVGGLISAGVLLISKDF*CWDLEK Trigger: TTTTTCCAGATCCCAGCATCAGAAGTCCTTACTGAT...CAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGGTCCCTTTTTGTGAGTaGTCCATAGCCTCAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRVPFCE*SIASVI Trigger: TATTACTGAGGCTATGGAGCACTCACAAAAAGGGAC...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTGGGAAAATGAAAATCTaGGTTTCTCCACACAAGATG | + |
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Preference number: 2 (lower is better) Translates to: WSSYRITLLLSFFQPSLIGKMKI*VSPHKM Trigger: CATCTTGTGTGGAGAAACCCAGATTTTCATTTTCCC...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGAGACAGGAAGAATTATaGGTCAGAGATGTGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRRQEEL*VRDVTV Trigger: CACAGTCACATCTCTGACCCATAATTCTTCCTGTCT...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTGTCTTCTGCAATCATaGTGTCAAATATCTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QTWKSSTVCVLGVSYQLVCLLQS*CQISGN Trigger: GTTACCAGATATTTGACACCATGATTGCAGAAGACA...CACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGAAAAGTTTAACAGACTaGGGAAGTCTTCTGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YRITLLLSFFQPSLIQQQKSLTD*GSLLGL Trigger: CAAGCCCAGAAGACTTCCTCAGTCTGTTAAACTTTT...CTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTGGGAAAATGAAAATCTaGGTTTCTCCACACAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSGKMKI*VSPHKM Trigger: CATCTTGTGTGGAGAAACCCAGATTTTCATTTTCCC...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTCTCTCCCAAGTAAAATaGAAGAGGATGAAAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLYCMCVGGLISAGVLLSLSQVK*KRMKER Trigger: CCTTTCTTTCATCCTCTTCCATTTTACTTGGGAGAG...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTCTGCAATCATGGTGTCAAATATCTGGTAACATATTTGATGTTCTGTTCCACCCCATCCCTCACTTaGTGTTCTGTCTTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VFCNHGVKYLVTYLMFCSTPSLT*CSVFLL Trigger: CAGCAGGAAGACAGAACATCAAGTGAGGGATGGGGT...GGAACAGAACATCAAATATGTTACCAGATATTTGACACCATGATTGCAGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGTTCAACAACACAGAATaGCTTTTTAGAGTCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRFNNTE*LFRVTV Trigger: GACTGTGACTCTAAAAAGGCATTCTGTGTTGTTGAA...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGATGTTTTCATTCTTTCTaGTGGCCCTTAGGGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KMEEDERKVATTELRDSRCFHSF*WPLGLQ Trigger: CTGAAGCCCTAAGGGCCAGCAGAAAGAATGAAAACA...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCCATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCATGTGTCGAGGAGCTCTTTaGTTCAAAATGTCACACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSHGCASIFIPGGQMTFMCRGAL*FKMSHN Trigger: GTTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACA...CATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCATGATCTGTACTGTAGAGGTACAATaGCCAGAACTTCTGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HGCASIFIPGGQMTFMICTVEVQ*PELLPQ Trigger: CTGTGGCAGAAGTTCTGGGCATTGTACCTCTACAGT...ACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGATTTTGGACTTGTCACTaGATCTTCTTTTCCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KMEEDERKVATTELRDSRFWTCH*IFFSSG Trigger: GCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAA...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTTTCAACAACACAGAATaGCTTTTTAGAGTCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SYQLVYCCLFGGPVFERSFNNTE*LFRVTV Trigger: GACTGTGACTCTAAAAAGGCATTCTGTGTTGTTGAA...AGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCAGCCATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCACATTATCATCAACTaGTTGTATAAAACTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ALQPWVRIYFYSWRTNDIHIIIN*LYKTQD Trigger: GTCCTGAGTTTTATACAAGCAGTTGATGATAATGTG...AATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR CAA 90 bp | GATGATGTCTTCTGCAATCATGGTGTCAAATATCTGGTAACATATTaGATGTTCTGTTCCACTTGTGACGTTGTAGGACTTGATGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: DDVFCNHGVKYLVTY*MFCSTCDVVGLDEA Trigger: TGCCTCATCAAGTCCTACAACGTCACAAGTGGAACAGAACATCAAATATGTTACCAGATATTTGACACCATGATTGCAGAAGACATCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCACACATTATCATCAACTaGTTGTATAAAACTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLSISIPVILSDRKNYGSHIIIN*LYKTQD Trigger: GTCCTGAGTTTTATACAAGCAGTTGATGATAATGTG...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTCAGCTGCCTGTTGGTCTTTCAGAGGGCAGTCATGTTAGGTCCCTTTAACCTGCCGTCCTCCTaGGCCTTCAGTGGTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DSFSCLLVFQRAVMLGPFNLPSS*AFSGPD Trigger: GTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTT...AAAGGGACCTAACATGACTGCCCTCTGAAAGACCAACAGGCAGCTGAAAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | CTGCCGTCCTCCTTGGCCTTCAGTGGTCCAGACCTCTaGGTCATACAATGGTGTATCTTGCAGCTTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSLAFSGPDL*VIQWCILQLAV Trigger: GACTGCAAGCTGCAAGATACACCATTGTATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAGGACGGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR GCA 72 bp | AGGACGCCGTCATTCTTTACAAAATGGACAGCAACCTaGCGTCCTCCTTGGCCTTCAGTGGTCCAGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RTPSFFTKWTAT*RPPWPSVVQTS Trigger: AGAGGTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTTGCTGTCCATTTTGTAAAGAATGACGGCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | AGGCCTTGGGACCTCCCTTTGAGCTGGATCCCATTTTaGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPWDLPLSWIPF*TCHWIFFSSGS Trigger: GGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCAAACCAGACATTCACTaGAGTGAGGAAGGACGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPKPDIH*SEEGRR Trigger: ACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTT...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTGAGCTGGATCCCATTTaGGACTTGTCACTGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLALRASVLFPHPIPDQVELDPI*DLSLDL Trigger: AAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTC...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTTTGGTGGTCCAGTGTTaGAGAGATCTCAGGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSPLLYVCWGSHISWCTVLVVQC*RDLRGP Trigger: TGGACCCCTGAGATCTCTCAAACACTGGACCACCAA...AACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR GCA 72 bp | ACAACAGGGGTCAGCTGCTTCTGTCCATTGGTTGGGTaGAGATATCTGAATCTGACTCTTTCAGCTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TTGVSCFCPLVG*RYLNLTLSAAC Trigger: ACAGGCAGCTGAAAGAGTCAGATTCAGATATCTGCACCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCTTTGAGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCCTAAGGTCCCTCCCTTaGATTCCTGAGAGTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPFELDPILDLSLDLLFLLRSLP*IPESLS Trigger: TGAGAGACTCTCAGGAATCAAAGGGAGGGACCTTAG...GAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCTGTCGAGGAGCTCTTaGCTTCAAAATGTCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LLALRASVLFPHPIPDQVLSRSS*LQNVTQ Trigger: TTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACAG...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | TCAGGCATTTCATCTAAGGTCCCTCCCTTTGATTCCTaGGAGTCTCTCACATCCCAGGTCTCTGGTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: SGISSKVPPFDS*ESLTSQVSGTF Trigger: GAATGTACCAGAGACCTGGGATGTGAGAGACTCTCAGGAATCAAAGGGAGGGACCTTAGATGAAATGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | GTCTTTCAGAGGGCAGTCATGTTAGGTCCCTTTTTGTaGGTGCTCCATAGCCTCAGTAATAGTGTCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VFQRAVMLGPFL*VLHSLSNSVRP Trigger: AGGCCTGACACTATTACTGAGGCTATGGAGCACTCACAAAAAGGGACCTAACATGACTGCCCTCTGAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | GAGCCGGCCTCCTTCGATCAAAACCAGACATTCACTTaGGTGAGGAAGGACGCCGTCATTCTTTACAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: EPASFDQNQTFT*VRKDAVILYKM Trigger: CATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | TGCCACCCACCCACTACACACAACAGCAGCGCTAGATaGTGTCTTCTGCAATCATGGTGTCAAATATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CHPPTTHNSSAR*CLLQSWCQISG Trigger: ACCAGATATTTGACACCATGATTGCAGAAGACATCATCTAGCGCTGCTGTTGTGTGTAGTGGGTGGGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR GCA 72 bp | GGTTGGGTGCAGATATCTGAATCTGACTCTTTCAGCTaGCTGTTGGTCTTTCAGAGGGCAGTCATGTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GWVQISESDSFS*LLVFQRAVMLG Trigger: ACCTAACATGACTGCCCTCTGAAAGACCAACAGGCAGCTGAAAGAGTCAGATTCAGATATCTGCACCCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| 3UTR CCA 72 bp | TTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGGTTaGGTGCAGATATCTGAATCTGACTCTTTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FNNRGQLLLSIG*VQISESDSFSC Trigger: GCAGCTGAAAGAGTCAGATTCAGATATCTGCACCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | CCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTaGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLLYVCWGSHIS*CTVVCLVVQCL Trigger: CAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | TTCTTTACAAAATGGACAGCAACCTGCCGTCCTCCTTaGCCTTCAGTGGTCCAGACCTCTGAGTCATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: FFTKWTATCRPP*PSVVQTSESYN Trigger: ATTGTATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTTGCTGTCCATTTTGTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTACAAAAACAAGTGTCTaGTGCAGAAGACAGACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSTKTSV*CRRQTY Trigger: GTAGGTCTGTCTTCTGCACAAGACACTTGTTTTTGT...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTTCTACTGTATGTGTGTaGGGGGTCTCATATCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSPLLYVCWGSHISWCTVSTVCV*GVSYQL Trigger: CAGCTGATATGAGACCCCCAACACACATACAGTAGA...AACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | ATTCTTTCAGACAGGAAGAATTATGGGTCAGAGATGTaGCTGTGGGATGGCAACCCCATCCCTCACTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: ILSDRKNYGSEM*LWDGNPIPHLM Trigger: CATCAAGTGAGGGATGGGGTTGCCATCCCACAGTCACATCTCTGACCCATAATTCTTCCTGTCTGAAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | CGGCCTCCTTCGATCAAAACCAGACATTCACTTGAGTaGGGAAGGACGCCGTCATTCTTTACAAAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: RPPSIKTRHSLE*GRTPSFFTKWT Trigger: TGTCCATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | CTATTTCCTGAGGTTGCCTGTTTTCATTCTTTCTGCTaGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LFPEVACFHSFC*PLGLQFFSLTQ Trigger: TTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGAATGAAAACAGGCAACCTCAGGAAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | AGTAATAGTGTCAGGCCTTGGGACCTCCCTTTGAGCTaGATCCCATTTTGGACTTGTCACTGGATCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SNSVRPWDLPLS*IPFWTCHWIFF Trigger: AAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGGTCCCAAGGCCTGACACTATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | TGTGACGTTGTAGGACTTGATGAGGCACTCCAGCCATaGGTGCGCATCTATTTTTATTCCTGGAGGACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CDVVGLDEALQP*VRIYFYSWRTN Trigger: ATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGCCTCATCAAGTCCTACAACGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTCAGCTGCCTGTTGGTCTTTCAGAGGGCAGTCATGTTAGGTCCCTTTTCCTATTTCCTGAGGTaGCCTGTTTTCATTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSFSCLLVFQRAVMLGPFSYFLR*PVFILS Trigger: AGAAAGAATGAAAACAGGCAACCTCAGGAAATAGGA...AAAGGGACCTAACATGACTGCCCTCTGAAAGACCAACAGGCAGCTGAAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACTCCAGCCATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTACAAAAACAAGTGTCTaGTGCAGAAGACAGACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALQPWVRIYFYSWRTNDITKTSV*CRRQTY Trigger: GTAGGTCTGTCTTCTGCACAAGACACTTGTTTTTGT...AATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTTTGAGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCTCCTATTTCCTGAGGTaGCCTGTTTTCATTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPFELDPILDLSLDLLFLSYFLR*PVFILS Trigger: AGAAAGAATGAAAACAGGCAACCTCAGGAAATAGGA...GAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | TCCTGTCTCTTGAAGGTTAGGTGCATCATCTCTGAATaGACAGACCTGGAAGTCCTCTACTGTATGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLLKVRCIISE*TDLEVLYCMCV Trigger: AACACACATACAGTAGAGGACTTCCAGGTCTGTTCATTCAGAGATGATGCACCTAACCTTCAAGAGACAGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | CTGATGCTGGGATCTGGAAAAACTTCTCAGAATCCTTaGGGTAGACATCCAATACTCCGGTTCCATCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LMLGSGKTSQNP*GRHPILRFHHQ Trigger: TTGATGATGGAACCGGAGTATTGGATGTCTACCTCAAGGATTCTGAGAAGTTTTTCCAGATCCCAGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR CCA 72 bp | GCACTCCAGCCATGGGTGCGCATCTATTTTTATTCCTaGAGGACAAATGACATTCATGATCTGTTCCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: ALQPWVRIYFYS*RTNDIHDLFQI Trigger: AATCTGGAACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTGTATGGTTTTCAAGTTaGAGCACTGTTTACATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLYCMCVGGLISAGVLLSVWFSS*STVYIH Trigger: ATGGATGTAAACAGTGCTCAAACTTGAAAACCATAC...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | CAGGACAGGAATATAAACCCAACCAAGGATGGTAAGTaGACAGCACAAAAACAAGTGTCTTGTGCAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QDRNINPTKDGK*TAQKQVSCAED Trigger: GTCTTCTGCACAAGACACTTGTTTTTGTGCTGTTCACTTACCATCCTTGGTTGGGTTTATATTCCTGTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | GAAGTCTTCTGGGCTTGTATGATCTTAGCTTTGCTCTaGTACGATACTGTCGAGGAGCTCTTTGCTTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EVFWACMILALL*YDTVEELFASK Trigger: TTTTGAAGCAAAGAGCTCCTCGACAGTATCGTATCAGAGCAAAGCTAAGATCATACAAGCCCAGAAGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | GGACAAATGACATTCATGATCTGTTCCAGATTTCTCTaGAGGTCATCATCAGTAAGGACTTCTGATGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQMTFMICSRFL*RSSSVRTSDAG Trigger: CCCAGCATCAGAAGTCCTTACTGATGATGACCTTCAGAGAAATCTGGAACAGATCATGAATGTCATTTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR TCA 72 bp | ACAGACCTACAATGTCTGGTAACAATAGAGATTACCTaGAGGGAAAATGAAAATCTGGGTTTCTCCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: TDLQCLVTIEIT*RENENLGFSTQ Trigger: TTGTGTGGAGAAACCCAGATTTTCATTTTCCCTTCAGGTAATCTCTATTGTTACCAGACATTGTAGGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCAACCAGACATTCACTTaGGTGAGGAAGGACGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFNQTFT*VRKDAV Trigger: GACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTT...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR GCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCCATCCACTTGTGCTTTaGCCAGGAGCTGACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFHPLVL*PGADRS Trigger: TGACCTGTCAGCTCCTGGGCAAAGCACAAGTGGATG...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCCACTCCATCCACTTGTaGTTTGCCCAGGAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPHSIHL*FAQELT Trigger: TGTCAGCTCCTGGGCAAAGCACAAGTGGATGGAGTG...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCAAGCTGAAATGTGTGTaGATGCCCACGTTCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFKLKCV*MPTFAR Trigger: CCTTGCGAACGTGGGCATCCACACACATTTCAGCTT...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CAA 72 bp | CCCTACTGTCAGGCATTTCATCTAAGGTCCCTCCCTTaGATTCCTGAGAGTCTCTCACATCCCAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYCQAFHLRSLP*IPESLSHPRSL Trigger: CAGAGACCTGGGATGTGAGAGACTCTCAGGAATCAAAGGGAGGGACCTTAGATGAAATGCCTGACAGTAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CAA 72 bp | TGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTGTTaGGTGGTCCAGTGTTTGAGAGATCTCAGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGSHISWCTVVC*VVQCLRDLRGP Trigger: TGGACCCCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGAGACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCAACCAGACATTCACTTaGGTGAGGAAGGACGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVNQTFT*VRKDAV Trigger: GACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTACTGTAGAGGTACAATaGCCAGAACTTCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLALRASVLFPHPIPDQVTVEVQ*PELLPQ Trigger: CTGTGGCAGAAGTTCTGGGCATTGTACCTCTACAGT...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR TCA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCTCTGGTCCACAATCGTaGCAACAGAGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPSGPQS*QQSNNL Trigger: CAGATTATTGCTCTGTTGTCACGATTGTGGACCAGA...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCAGACATTCACTTGAGTaGGGAAGGACGCCGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVRHSLE*GRTPSF Trigger: GAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCACTCCATCCACTTGTaGTTTGCCCAGGAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSHSIHL*FAQELT Trigger: TGTCAGCTCCTGGGCAAAGCACAAGTGGATGGAGTG...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | CAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGGAATCTTTGTCCTGGTaGCATCCCATACCTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTWKSSTVCVLGVSYQLVESLSW*HPIPLG Trigger: TCCTAAAGGTATGGGATGGCACCAGGACAAAGATTC...CACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTAAGCAACGTCTTGTATaGAGACTCTCCAAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSKQRLV*RLSKRE Trigger: TTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTT...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | GACTCTTTCAGCTGCCTGTTGGTCTTTCAGAGGGCAGTCATGTTAGGTCCCTTTAATGCCCAGAACTTCTaGCACAGAGGAAGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSFSCLLVFQRAVMLGPFNAQNF*HRGRNP Trigger: TGGATTCCTTCCTCTGTGGCAGAAGTTCTGGGCATT...AAAGGGACCTAACATGACTGCCCTCTGAAAGACCAACAGGCAGCTGAAAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCAGGGAATCTTTGTCCTaGTGCCATCCCATACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFRESLS*CHPIPL Trigger: TAAAGGTATGGGATGGCACCAGGACAAAGATTCCCT...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCAGGGAATCTTTGTCCTaGTGCCATCCCATACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPRESLS*CHPIPL Trigger: TAAAGGTATGGGATGGCACCAGGACAAAGATTCCCT...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCTGTTGTAGCACAGAGTaGTTGACATCTTTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPCCSTE*LTSFHL Trigger: GAGGTGGAAAGATGTCAACCACTCTGTGCTACAACA...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR CCA 90 bp | TACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGCTCCTTGGCCTTCAGTaGTCCAGACCTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRITLLLSFFQPSLIQQQLLGLQ*SRPLSH Trigger: ATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAG...CTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR GCA 90 bp | TCATATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCATCCACTTGTGCTTTaGCCAGGAGCTGACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYQLVYCCLFGGPVFERSHPLVL*PGADRS Trigger: TGACCTGTCAGCTCCTGGGCAAAGCACAAGTGGATG...AGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCACTGTAGAGGTACAATaGCCAGAACTTCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVTVEVQ*PELLPQ Trigger: CTGTGGCAGAAGTTCTGGGCATTGTACCTCTACAGT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCCCACTGAGGAAGTCTTCTaGGCTTGTATGATCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLQFFSLTQYQIRFPSPTEEVF*ACMILA Trigger: AGCTAAGATCATACAAGCCCAGAAGACTTCCTCAGT...GGGAGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCTCTGATGCTGGGATCTaGAAAAACTTCTCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFSDAGI*KNFSES Trigger: GGATTCTGAGAAGTTTTTCCAGATCCCAGCATCAGA...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR TCA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTATCAGTAAGGACTTCTaGTGCTGGGATCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSYRITLLLSFFQPSLIISKDF*CWDLEK Trigger: TTTTTCCAGATCCCAGCATCAGAAGTCCTTACTGAT...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCACACTCCATCCACTTGTaGTTTGCCCAGGAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSISIPVILSDRKNYGSHSIHL*FAQELT Trigger: TGTCAGCTCCTGGGCAAAGCACAAGTGGATGGAGTG...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTTTGAGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAAGCAACGTCTTGTATaGAGACTCTCCAAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPFELDPILDLSLDLLFLKQRLV*RLSKRE Trigger: TTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTT...GAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTAATGCCCAGAACTTCTaGCACAGAGGAAGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSNAQNF*HRGRNP Trigger: TGGATTCCTTCCTCTGTGGCAGAAGTTCTGGGCATT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCAGGGAATCTTTGTCCTaGTGCCATCCCATACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVRESLS*CHPIPL Trigger: TAAAGGTATGGGATGGCACCAGGACAAAGATTCCCT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCCATCTGAGGTCTGAATaGCTTCCAAGTCTACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SFCWPLGLQFFSLTQYQIHLRSE*LPSLQI Trigger: AATCTGTAGACTTGGAAGCCATTCAGACCTCAGATG...GATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCCTCCTTGGCCTTCAGTaGTCCAGACCTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFLLGLQ*SRPLSH Trigger: ATGACTCAGAGGTCTGGACCACTGAAGGCCAAGGAG...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| 3UTR CAA 72 bp | GTGCAGATATCTGAATCTGACTCTTTCAGCTGCCTGTaGGTCTTTCAGAGGGCAGTCATGTTAGGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQISESDSFSCL*VFQRAVMLGPF Trigger: AAAGGGACCTAACATGACTGCCCTCTGAAAGACCAACAGGCAGCTGAAAGAGTCAGATTCAGATATCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CAA 72 bp | AGAGCCGGCCTCCTTCGATCAAAACCAGACATTCACTaGAGTGAGGAAGGACGCCGTCATTCTTTACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RAGLLRSKPDIH*SEEGRRHSLQN Trigger: ATTTTGTAAAGAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTTTGATCGAAGGAGGCCGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCAAAAGTTTAACAGACTaGGGAAGTCTTCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVKSLTD*GSLLGL Trigger: CAAGCCCAGAAGACTTCCTCAGTCTGTTAAACTTTT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | CAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGAAGCTCATTTTTATATaGTTGGATCTTCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTWKSSTVCVLGVSYQLVKLIFI*LDLQPL Trigger: CAAGGGCTGAAGATCCAAGCATATAAAAATGAGCTT...CACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTGAATCTTTGTCCTGGTaGCATCCCATACCTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSESLSW*HPIPLG Trigger: TCCTAAAGGTATGGGATGGCACCAGGACAAAGATTC...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTTGTCGAGGAGCTCTTTaGTTCAAAATGTCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPLLYVCWGSHISWCTVCRGAL*FKMSHN Trigger: GTTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACA...AACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCTGTCGAGGAGCTCTTTaGTTCAAAATGTCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVCRGAL*FKMSHN Trigger: GTTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACA...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGAAAGCTGAAATGTGTGTaGATGCCCACGTTCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KMEEDERKVATTELRDSRKLKCV*MPTFAR Trigger: CCTTGCGAACGTGGGCATCCACACACATTTCAGCTT...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCAAGCTGAAATGTGTGTaGATGCCCACGTTCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFKLKCV*MPTFAR Trigger: CCTTGCGAACGTGGGCATCCACACACATTTCAGCTT...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGCATCTGAGGTCTGAATaGCTTCCAAGTCTACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVLYCMCVGGLISAGVLLHLRSE*LPSLQI Trigger: AATCTGTAGACTTGGAAGCCATTCAGACCTCAGATG...CAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCCATCTGAGGTCTGAATaGCTTCCAAGTCTACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVHLRSE*LPSLQI Trigger: AATCTGTAGACTTGGAAGCCATTCAGACCTCAGATG...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCACTGAGGAAGTCTTCTaGGCTTGTATGATCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVTEEVF*ACMILA Trigger: AGCTAAGATCATACAAGCCCAGAAGACTTCCTCAGT...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCTCTGATGCTGGGATCTaGAAAAACTTCTCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVSDAGI*KNFSES Trigger: GGATTCTGAGAAGTTTTTCCAGATCCCAGCATCAGA...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| 3UTR CAA 72 bp | CCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATaGGTTGGGTGCAGATATCTGAATCTGACTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTTGVSCFCP*VGCRYLNLTLS Trigger: TGAAAGAGTCAGATTCAGATATCTGCACCCAACCAATGGACAGAAGCAGCTGACCCCTGTTGTTGAATTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAAGACAGACCTACAATGTCTGGTAACAATAGAGATTACCTGAAGGGAAAAAGACATTCACTTGAGTaGGGAAGGACGCCGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AEDRPTMSGNNRDYLKGKRHSLE*GRTPSF Trigger: GAATGACGGCGTCCTTCCTCACTCAAGTGAATGTCT...TTTTCCCTTCAGGTAATCTCTATTGTTACCAGACATTGTAGGTCTGTCTTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR TCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTATCAGTAAGGACTTCTaGTGCTGGGATCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSISKDF*CWDLEK Trigger: TTTTTCCAGATCCCAGCATCAGAAGTCCTTACTGAT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTAACTTCACATTTGTCTaGTCCACAATCGTGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSPLLYVCWGSHISWCTVNFTFV*STIVTT Trigger: TGTTGTCACGATTGTGGACCAGACAAATGTGAAGTT...AACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTTCATTTTTATATGCTTaGATCTTCAGCCCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSYRITLLLSFFQPSLISFLYA*IFSPWK Trigger: CTTCCAAGGGCTGAAGATCCAAGCATATAAAAATGA...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGAAAGCTGCACTAAGTTaGAAGAAGCTGAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRKAALS*KKLKCV Trigger: CACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTT...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCTCTGGTCCACAATCGTaGCAACAGAGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFSGPQS*QQSNNL Trigger: CAGATTATTGCTCTGTTGTCACGATTGTGGACCAGA...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTTTGAGCTGGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAACTTGCTGATTGCCTaGAGCTCATTTTTATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPFELDPILDLSLDLLFLNLLIA*SSFLYA Trigger: AGCATATAAAAATGAGCTTCAGGCAATCAGCAAGTT...GAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCCAGCTCAAAGGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTGGAAGTTGTGGACTCTaGATTAATTGGCTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSGSCGL*INWLKF Trigger: AAACTTCAGCCAATTAATTCAGAGTCCACAACTTCC...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCAAGCAACGTCTTGTATaGAGACTCTCCAAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFKQRLV*RLSKRE Trigger: TTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTT...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCCAGCCATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTAAAGCTGCACTAAGTTaGAAGAAGCTGAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALQPWVRIYFYSWRTNDIKAALS*KKLKCV Trigger: CACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTT...AATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCTGTTGTAGCACAGAGTaGTTGACATCTTTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFCCSTE*LTSFHL Trigger: GAGGTGGAAAGATGTCAACCACTCTGTGCTACAACA...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCCTCTCCATTGTCTTCTGCAATCATaGTGTCAAATATCTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSHFGLVTGSSFPQAPLHCLLQS*CQISGN Trigger: GTTACCAGATATTTGACACCATGATTGCAGAAGACA...ATGGAGAGGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR TCA 90 bp | CATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCATGATCTGTTCTGGTCCACAATCGTaGCAACAGAGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGCASIFIPGGQMTFMICSGPQS*QQSNNL Trigger: CAGATTATTGCTCTGTTGTCACGATTGTGGACCAGA...ACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCATGGGTGCGCATCTATTTTTATTCCTGGAGGACAAATGACATTCATGGGAAGTTGTGGACTCTaGATTAATTGGCTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHGCASIFIPGGQMTFMGSCGL*INWLKF Trigger: AAACTTCAGCCAATTAATTCAGAGTCCACAACTTCC...CATGAATGTCATTTGTCCTCCAGGAATAAAAATAGATGCGCACCCATGGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGAAAAAGTTTAACAGACTaGGGAAGTCTTCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMEEDERKVATTELRDSRKSLTD*GSLLGL Trigger: CAAGCCCAGAAGACTTCCTCAGTCTGTTAAACTTTT...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTAAGCTCATTTTTATATaGTTGGATCTTCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSKLIFI*LDLQPL Trigger: CAAGGGCTGAAGATCCAAGCATATAAAAATGAGCTT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGACAGACCTACAATGTCTGGTAACAATAGAGATTACCTGAAGGGAAAAGAATCTTTGTCCTGGTaGCATCCCATACCTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEDRPTMSGNNRDYLKGKESLSW*HPIPLG Trigger: TCCTAAAGGTATGGGATGGCACCAGGACAAAGATTC...TTTTCCCTTCAGGTAATCTCTATTGTTACCAGACATTGTAGGTCTGTCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR TCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGAGGAAGTTGTGGACTCTaGATTAATTGGCTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KMEEDERKVATTELRDSRGSCGL*INWLKF Trigger: AAACTTCAGCCAATTAATTCAGAGTCCACAACTTCC...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAAACTTCACATTTGTCTaGTCCACAATCGTGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSISIPVILSDRKNYGSNFTFV*STIVTT Trigger: TGTTGTCACGATTGTGGACCAGACAAATGTGAAGTT...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCAACTTCACATTTGTCTaGTCCACAATCGTGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFNFTFV*STIVTT Trigger: TGTTGTCACGATTGTGGACCAGACAAATGTGAAGTT...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCAAAGCTGCACTAAGTTaGAAGAAGCTGAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFKAALS*KKLKCV Trigger: CACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTT...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAAACTTGCTGATTGCCTaGAGCTCATTTTTATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSISIPVILSDRKNYGSNLLIA*SSFLYA Trigger: AGCATATAAAAATGAGCTTCAGGCAATCAGCAAGTT...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAAGAGGATGAAAGAAAGGTAGCCACCACTGAGCTAAGAGACTCAAGAAAGCTCATTTTTATATaGTTGGATCTTCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMEEDERKVATTELRDSRKLIFI*LDLQPL Trigger: CAAGGGCTGAAGATCCAAGCATATAAAAATGAGCTT...TCTTGAGTCTCTTAGCTCAGTGGTGGCTACCTTTCTTTCATCCTCTTCCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCTGCCACAGAGGAAGGAATCCATAGTCTTTTATTAGGAATGATACTTACTTGTAGCACAGAGTaGTTGACATCTTTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSATEEGIHSLLLGMILTCSTE*LTSFHL Trigger: GAGGTGGAAAGATGTCAACCACTCTGTGCTACAAGT...AAGTATCATTCCTAATAAAAGACTATGGATTCCTTCCTCTGTGGCAGAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS-3UTR GCA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGAAGCACCTTTGAAATaGTGCCTACCTATTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFEAPLK*CLPIFI Trigger: AATAAAAATAGGTAGGCAGCATTTCAAAGGTGCTTC...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGACAGACCTACAATGTCTGGTAACAATAGAGATTACCTGAAGGGAAAATCATTTTTATATGCTTaGATCTTCAGCCCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEDRPTMSGNNRDYLKGKSFLYA*IFSPWK Trigger: CTTCCAAGGGCTGAAGATCCAAGCATATAAAAATGA...TTTTCCCTTCAGGTAATCTCTATTGTTACCAGACATTGTAGGTCTGTCTTCTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| 3UTR CAA 72 bp | TTCTGCAATCATGGTGTCAAATATCTGGTAACATATTaGATGTTCTGTTCCACTTGTGACGTTGTAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: FCNHGVKYLVTY*MFCSTCDVVGL Trigger: AAGTCCTACAACGTCACAAGTGGAACAGAACATCAAATATGTTACCAGATATTTGACACCATGATTGCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| 3UTR CAA 72 bp | TGTGTTATTATCTACACTCACATTATCATCAACTGCTaGTATAAAACTCAGGACAGGAATATAAACCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CVIIYTHIIINC*YKTQDRNINPT Trigger: GGTTGGGTTTATATTCCTGTCCTGAGTTTTATACAAGCAGTTGATGATAATGTGAGTGTAGATAATAACACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAACCCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATCCAAGAGGGAATCTTaGTCCTGGTGCCATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: WQPHPSLDVLSSCWWWALSKRES*SWCHPI Trigger: TATGGGATGGCACCAGGACAAAGATTCCCTCTTGGA...TAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGGGTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTACTGTTGTCTAACCTGCCGTCCTCCTaGGCCTTCAGTGGTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLYCMCVGGLISAGVLLSNLPSS*AFSGPD Trigger: GTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTT...AGACAACAGTACACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTAACCTGCCGTCCTCCTaGGCCTTCAGTGGTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSNLPSS*AFSGPD Trigger: GTCTGGACCACTGAAGGCCAAGGAGGACGGCAGGTT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | CAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGGGGTCTCATATCAGCTGGTGTTGGATCTTCAGCCCTaGGAAGCAAACGATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTWKSSTVCVLGVSYQLVLDLQP*EANDVS Trigger: GGAGACATCGTTTGCTTCCAAGGGCTGAAGATCCAA...CACCAGCTGATATGAGACCCCCAACACACATACAGTAGAGGACTTCCAGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS CCA 90 bp | GGTCGTAATACTGCATGGGCTGAGCATCAGAAAGCTGCACTAAGTTaGAAGAAGCTGAAATGTGTGTGGATGCCCACGTTCGCAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRNTAWAEHQKAALS*KKLKCVWMPTFARL Trigger: AAGCCTTGCGAACGTGGGCATCCACACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTTCTGATGCTCAGCCCATGCAGTATTACGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
||
| CDS CCA 90 bp | GAGCATCAGAAAGCTGCACTAAGTTGGAAGAAGCTGAAATGTGTGTaGATGCCCACGTTCGCAAGGCTTCTACCATACTGTAGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EHQKAALSWKKLKCV*MPTFARLLPYCSPE Trigger: CTCAGGACTACAGTATGGTAGAAGCCTTGCGAACGTGGGCATCCACACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTTCTGATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCTTGGATCTTCAGCCCTaGGAAGCAAACGATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVLDLQP*EANDVS Trigger: GGAGACATCGTTTGCTTCCAAGGGCTGAAGATCCAA...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCTCACTTGATGTTCTGTCTTCCTGCTGGTGGTGGGCTCTATAAGTTCCTGTCGAGGAGCTCTTaGCTTCAAAATGTCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: PIPHLMFCLPAGGGLYKFLSRSS*LQNVTQ Trigger: TTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACAG...GAACTTATAGAGCCCACCACCAGCAGGAAGACAGAACATCAAGTGAGGGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
||
| CDS TCA 90 bp | TCGGTGACTACACTGGAAAAGGGCTTACTTGTAGCACAGAGTGGTTaGCATCTTTCCACCTCATACAGGGAAACTAGGTCTGATTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVTTLEKGLLVAQSG*HLSTSYRETRSDSE Trigger: CTCCGAATCAGACCTAGTTTCCCTGTATGAGGTGGAAAGATGTCAACCACTCTGTGCTACAAGTAAGCCCTTTTCCAGTGTAGTCACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
||
| CDS GCA 90 bp | CAACGTCTTGTATGCAGACTCTCCAAGAGGGAATCTTTGTCCTGGTaGCATCCCATACCTTTAGGAGAAATGACACTCCATCCACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLVCRLSKRESLSW*HPIPLGEMTLHPLV Trigger: CACAAGTGGATGGAGTGTCATTTCTCCTAAAGGTATGGGATGGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCACAACACCACAGACATaGACAACAGTGCCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFCWPLGLQFFSLTQYQITTPQT*TTVPSL Trigger: TAAGGAAGGCACTGTTGTCAATGTCTGTGGTGTTGT...GATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTGAAAGCTGCACTAAGTaGGAAGAAGCTGAAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSESCTK*EEAEMC Trigger: ACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTTC...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTTCCAAGAGGGAATCTTaGTCCTGGTGCCATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSSKRES*SWCHPI Trigger: TATGGGATGGCACCAGGACAAAGATTCCCTCTTGGA...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTAAACCAGACATTCACTaGAGTGAGGAAGGACGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSKPDIH*SEEGRR Trigger: ACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS GCA 90 bp | GCTGCAGAATGTGACTTAAGTCACCTTCAAAAGCAACGTCTTGTATaGAGACTCTCCAAGAGGGAATCTTTGTCCTGGTGCCATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AAECDLSHLQKQRLV*RLSKRESLSWCHPI Trigger: TATGGGATGGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAAGGTGACTTAAGTCACATTCTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
||
| CDS CCA 90 bp | AAGCAACGTCTTGTATGCAGACTCTCCAAGAGGGAATCTTTGTCCTaGTGCCATCCCATACCTTTAGGAGAAATGACACTCCATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KQRLVCRLSKRESLS*CHPIPLGEMTLHPL Trigger: AAGTGGATGGAGTGTCATTTCTCCTAAAGGTATGGGATGGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCCCCTCTCTCATTTTTATATGCTaGGATCTTCAGCCCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLGLQFFSLTQYQIRFPSLIFIC*DLQPLE Trigger: TTCCAAGGGCTGAAGATCCAAGCATATAAAAATGAG...AGAGGGGAACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | TCATATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTTCCAAGAGGGAATCTTaGTCCTGGTGCCATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SYQLVYCCLFGGPVFERSSKRES*SWCHPI Trigger: TATGGGATGGCACCAGGACAAAGATTCCCTCTTGGA...AGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTTTCAAAAGCAACGTCTaGTATGCAGACTCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WSSYRITLLLSFFQPSLIFKSNV*YADSPR Trigger: TCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAA...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTCGATCTTTAGGGATTTaGCCACTTGGACATGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLALRASVLFPHPIPDQVRSLGI*PLGHDY Trigger: ATAATCATGTCCAAGTGGCAAAATCCCTAAAGATCG...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTACAACACCACAGACATaGACAACAGTGCCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSTTPQT*TTVPSL Trigger: TAAGGAAGGCACTGTTGTCAATGTCTGTGGTGTTGT...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCATTGGATCTTCAGCCCTaGGAAGCAAACGATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSISIPVILSDRKNYGSLDLQP*EANDVS Trigger: GGAGACATCGTTTGCTTCCAAGGGCTGAAGATCCAA...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGCCCTTAGGGCTTCAGTTCTTTTCCCTCACCCAATACCAGATCAGGTTGTGAAGTTAAATCTCTaGCTTAAAGTACGCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LLALRASVLFPHPIPDQVVKLNL*LKVRSM Trigger: CATACTGCGTACTTTAAGCAAGAGATTTAACTTCAC...AACCTGATCTGGTATTGGGTGAGGGAAAAGAACTGAAGCCCTAAGGGCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | ATCAGCTGGTGTACTGTTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGGAAAGCTGCACTAAGTaGGAAGAAGCTGAAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISWCTVVCLVVQCLRDLRESCTK*EEAEMC Trigger: ACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTTC...CCTGAGATCTCTCAAACACTGGACCACCAAACAGACAACAGTACACCAGCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | GGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCCTCTCCATTTCAAAAGCAACGTCTaGTATGCAGACTCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSHFGLVTGSSFPQAPLHFKSNV*YADSPR Trigger: TCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAA...ATGGAGAGGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCTTCAAAAGCAACGTCTaGTATGCAGACTCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVFKSNV*YADSPR Trigger: TCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAA...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | TGGTCCTCCTACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTGGTCTGATTCGGAGCTaGAAGATGTTAAACAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSYRITLLLSFFQPSLIGLIRS*KMLNNS Trigger: AGAATTGTTTAACATCTTCAAGCTCCGAATCAGACC...AATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTAGGAGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCTGTCGAGGAGCTCTTaGCTTCAAAATGTCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSLSRSS*LQNVTQ Trigger: TTGTGTGACATTTTGAAGCAAAGAGCTCCTCGACAG...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAAAACCAGACATTCACTaGAGTGAGGAAGGACGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSISIPVILSDRKNYGSKPDIH*SEEGRR Trigger: ACGGCGTCCTTCCTCACTCAAGTGAATGTCTGGTTT...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086876.7 |
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| CDS-3UTR CAA 90 bp | TGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTCCTCATTTTTATATGCTaGGATCTTCAGCCCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSHLAIPKDSVGFVLPTVLIFIC*DLQPLE Trigger: TTCCAAGGGCTGAAGATCCAAGCATATAAAAATGAG...GACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTGAAAGCTGCACTAAGTaGGAAGAAGCTGAAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSESCTK*EEAEMC Trigger: ACACATTTCAGCTTCTTCCAACTTAGTGCAGCTTTC...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | TACAGGATCACCCTTCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGCTCATTTTTATATGCTaGGATCTTCAGCCCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YRITLLLSFFQPSLIQQQLIFIC*DLQPLE Trigger: TTCCAAGGGCTGAAGATCCAAGCATATAAAAATGAG...CTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGAAGGGTGATCCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | GGATCCCATTTTGGACTTGTCACTGGATCTTCTTTTCCTCAGGCTCCTCTCCATGTGAAGTTAAATCTCTaGCTTAAAGTACGCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: GSHFGLVTGSSFPQAPLHVKLNL*LKVRSM Trigger: CATACTGCGTACTTTAAGCAAGAGATTTAACTTCAC...ATGGAGAGGAGCCTGAGGAAAAGAAGATCCAGTGACAAGTCCAAAATGGGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTGTGAAGTTAAATCTCTaGCTTAAAGTACGCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSVKLNL*LKVRSM Trigger: CATACTGCGTACTTTAAGCAAGAGATTTAACTTCAC...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGTTCTACCCACAGTGTATGGTTTTCAAGTTaGAGCACTGTTTACATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFTLSNSQGLSWLRSTHSVWFSS*STVYIH Trigger: ATGGATGTAAACAGTGCTCAAACTTGAAAACCATAC...ACTGTGGGTAGAACGAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGAGAAAGAAGCACCTTaGAAATGCTGCCTACCTATT | + |
|
Preference number: 5 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFEKEAP*KCCLPI Trigger: AATAGGTAGGCAGCATTTCAAAGGTGCTTCTTTCTC...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCACGATCTTTAGGGATTTaGCCACTTGGACATGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSISIPVILSDRKNYGSRSLGI*PLGHDY Trigger: ATAATCATGTCCAAGTGGCAAAATCCCTAAAGATCG...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCCGATCTTTAGGGATTTaGCCACTTGGACATGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFRSLGI*PLGHDY Trigger: ATAATCATGTCCAAGTGGCAAAATCCCTAAAGATCG...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTCCATTTCCATCCCTGTAATTCTTTCAGACAGGAAGAATTATGGGTCAGGTCTGATTCGGAGCTaGAAGATGTTAAACAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSISIPVILSDRKNYGSGLIRS*KMLNNS Trigger: AGAATTGTTTAACATCTTCAAGCTCCGAATCAGACC...TGACCCATAATTCTTCCTGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 |
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| CDS-3UTR CAA 90 bp | GACACTGATAGATATTGTTCACACTTAGCAATTCCCAAGGACTCAGTTGGCTTCGGTCTGATTCGGAGCTaGAAGATGTTAAACAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTDRYCSHLAIPKDSVGFGLIRS*KMLNNS Trigger: AGAATTGTTTAACATCTTCAAGCTCCGAATCAGACC...GAAGCCAACTGAGTCCTTGGGAATTGCTAAGTGTGAACAATATCTATCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS CCA 90 bp | AGAGAAAGAAGCACCTTTGAAATGCTGCCTACCTATTTTTATTCCTaGAGGACAAATGACATTCATGATCTGTTCCAGATTTCTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RERSTFEMLPTYFYS*RTNDIHDLFQISLK Trigger: CTTCAGAGAAATCTGGAACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGGTAGGCAGCATTTCAAAGGTGCTTCTTTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
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| CDS TCA 90 bp | TCCATGAAGATGAAATTCGAGTCTTACCAAGGAAGTTGTGGACTCTaGATTAATTGGCTGAAGTTTGGTATGGAGACTATAGATTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMKMKFESYQGSCGL*INWLKFGMETIDSK Trigger: CTTAGAATCTATAGTCTCCATACCAAACTTCAGCCAATTAATTCAGAGTCCACAACTTCCTTGGTAAGACTCGAATTTCATCTTCATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS GCA 72 bp | CCTTTAGGAGAAATGACACTCCATCCACTTGTGCTTTaGCCAGGAGCTGACAGGTCAGGTCGTAATACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLGEMTLHPLVL*PGADRSGRNTA Trigger: TGCAGTATTACGACCTGACCTGTCAGCTCCTGGGCAAAGCACAAGTGGATGGAGTGTCATTTCTCCTAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CCA 72 bp | CTTGTATGCAGACTCTCCAAGAGGGAATCTTTGTCCTaGTGCCATCCCATACCTTTAGGAGAAATGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: LVCRLSKRESLS*CHPIPLGEMTL Trigger: GAGTGTCATTTCTCCTAAAGGTATGGGATGGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CAA 90 bp | CTTCAAAAGCAACGTCTTGTATGCAGACTCTCCAAGAGGGAATCTTaGTCCTGGTGCCATCCCATACCTTTAGGAGAAATGACACTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQKQRLVCRLSKRES*SWCHPIPLGEMTLH Trigger: ATGGAGTGTCATTTCTCCTAAAGGTATGGGATGGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS TCA 72 bp | ACACTGGAAAAGGGCTTACTTGTAGCACAGAGTGGTTaGCATCTTTCCACCTCATACAGGGAAACTAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLEKGLLVAQSG*HLSTSYRETRS Trigger: AGACCTAGTTTCCCTGTATGAGGTGGAAAGATGTCAACCACTCTGTGCTACAAGTAAGCCCTTTTCCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233802.2 |
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| CDS GCA 72 bp | TGTGACTTAAGTCACCTTCAAAAGCAACGTCTTGTATaGAGACTCTCCAAGAGGGAATCTTTGTCCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CDLSHLQKQRLV*RLSKRESLSWC Trigger: GCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCTTTTGAAGGTGACTTAAGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CAA 72 bp | TACGGAGGCTTAAAGAACTTCACAACACCACAGACATaGACAACAGTGCCTTCCTTAAGTAGATTTAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: YGGLKNFTTPQT*TTVPSLSRFRG Trigger: ACCCCTAAATCTACTTAAGGAAGGCACTGTTGTCAATGTCTGTGGTGTTGTGAAGTTCTTTAAGCCTCCGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086876.7 ENSMUST00000233557.2 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CAA 72 bp | CCACCTCATACAGGGAAACTAGGTCTGATTCGGAGCTaGAAGATGTTAAACAATTCTCCACATTGTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: PPHTGKLGLIRS*KMLNNSPHCRI Trigger: AATCCGACAATGTGGAGAATTGTTTAACATCTTCAAGCTCCGAATCAGACCTAGTTTCCCTGTATGAGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS TCA 72 bp | ACAATGTCTACCACCAGATTCTGTAGCTGCAGAATGTaGCTTAAGTCACCTTCAAAAGCAACGTCTTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: TMSTTRFCSCRM*LKSPSKATSCM Trigger: CATACAAGACGTTGCTTTTGAAGGTGACTTAAGTCACATTCTGCAGCTACAGAATCTGGTGGTAGACATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CAA 90 bp | TTGCTTAAGTACGGAGGCTTAAAGAACTTCACAACACCACAGACATaGACAACAGTGCCTTCCTTAAGTAGATTTAGGGGTGTGTATGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLKYGGLKNFTTPQT*TTVPSLSRFRGVYV Trigger: TACATACACACCCCTAAATCTACTTAAGGAAGGCACTGTTGTCAATGTCTGTGGTGTTGTGAAGTTCTTTAAGCCTCCGTACTTAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086876.7 ENSMUST00000233557.2 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CAA 72 bp | CTGAAGCTCATTTTTATATGCTTGGATCTTCAGCCCTaGGAAGCAAACGATGTCTCCAACTTTATAAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: LKLIFICLDLQP*EANDVSNFINA Trigger: AGCGTTTATAAAGTTGGAGACATCGTTTGCTTCCAAGGGCTGAAGATCCAAGCATATAAAAATGAGCTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086876.7 ENSMUST00000233557.2 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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| CDS CCA 72 bp | AGCACCTTTGAAATGCTGCCTACCTATTTTTATTCCTaGAGGACAAATGACATTCATGATCTGTTCCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: STFEMLPTYFYS*RTNDIHDLFQI Trigger: AATCTGGAACAGATCATGAATGTCATTTGTCCTCCAGGAATAAAAATAGGTAGGCAGCATTTCAAAGGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233972.2 |
||
| CDS TCA 72 bp | ATGAAATTCGAGTCTTACCAAGGAAGTTGTGGACTCTaGATTAATTGGCTGAAGTTTGGTATGGAGACTATA | + |
|
Preference number: 6 (lower is better) Translates to: MKFESYQGSCGL*INWLKFGMETI Trigger: TATAGTCTCCATACCAAACTTCAGCCAATTAATTCAGAGTCCACAACTTCCTTGGTAAGACTCGAATTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086876.7 ENSMUST00000233802.2 ENSMUST00000233972.2 |
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