Pregenerated sensors for POT1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029676Ensembl transcript IDs: ENSMUST00000115327.8, ENSMUST00000115330.8, ENSMUST00000166445.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGCTGGTGGGCAATGAAGCAACTTCTAATGTTGTAGAGAAATGCTaGAGGTCAGGCATACTCTTCGGTTCACAGAGCTACACTTACGCT | + |
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Preference number: 1 (lower is better) Translates to: SLVGNEATSNVVEKC*RSGILFGSQSYTYA Trigger: AGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCCTGACCTTCAGCATTTCTCTACAACATTAGAAGTTGCTTCATTGCCCACCAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR TCA 90 bp | TCTCAGCATGAGGAAATGAACCAAGGGCACAGGTTCCAGCATAGATaGATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATC | + |
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Preference number: 1 (lower is better) Translates to: SQHEEMNQGHRFQHR*ISAHGVSKSNPIKI Trigger: GATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTCATGCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR GCA 90 bp | TCAACAAGAAGGTTGTCTTTGAGAGATTTAGATGACTCATGCTTATaGATTAGACTGCCAGGTTTGGGCAAAAACCAACTTGGGCTAATT | + |
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Preference number: 1 (lower is better) Translates to: STRRLSLRDLDDSCL*IRLPGLGKNQLGLI Trigger: AATTAGCCCAAGTTGGTTTTTGCCCAAACCTGGCAGTCTAATGCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR GCA 90 bp | TTAAGATCAACAAGAAGGTTGTCTTTGAGAGATTTAGATGACTCATaGTTATGCATTAGACTGCCAGGTTTGGGCAAAAACCAACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LRSTRRLSLRDLDDS*LCIRLPGLGKNQLG Trigger: CCCAAGTTGGTTTTTGCCCAAACCTGGCAGTCTAATGCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGTTGATCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCGTTCTCCCCAACCAGTaGTGCCTCATTTTGTACCTC | + |
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Preference number: 2 (lower is better) Translates to: FNRHAVNLILMCGCRGRIVLPNQ*CLILYL Trigger: GAGGTACAAAATGAGGCAGCACTGGTTGGGGAGAAC...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCCCAGTGTTTTATAAATaGGAGCCAAGAAAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FNRHAVNLILMCGCRGRIPVFYK*EPRKPG Trigger: ACCAGGCTTTCTTGGCTCTCATTTATAAAACACTGG...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCGCAACAAGGGATTTTTaGTATGTTCACAAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: FNRHAVNLILMCGCRGRIATRDF*YVHKTA Trigger: TGCTGTCTTGTGAACATATCAAAAATCCCTTGTTGC...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTGATGACTCATGCTTATaGATTAGACTGCCAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSDDSCL*IRLPGL Trigger: CAAACCTGGCAGTCTAATGCATAAGCATGAGTCATC...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR CAA 90 bp | GTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTTaGAGAGATTTAGATGACTCATGCTTATGCATTAGACTGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VYPKAIPLRSTRRLS*RDLDDSCLCIRLPG Trigger: ACCTGGCAGTCTAATGCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTTGTATTATAGTCAGATaGACTGAAAAGAGAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: REYQCLLFLLETDKEMVACIIVR*TEKRDP Trigger: TGGGTCTCTCTTTTCAGTTCATCTGACTATAATACA...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR CAA 90 bp | CACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTaGTCTTTGAGAGATTTAGATGACTCATGCTTATGCATTAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: HMVYPKAIPLRSTRR*SLRDLDDSCLCIRL Trigger: CAGTCTAATGCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAACAAGGGAGTACCAATaGCTTTTGTTCCTTTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: IDESQHMVYPKAIPLRSTTREYQ*LLFLLE Trigger: TTCTAAAAGGAACAAAAGGCATTGGTACTCCCTTGT...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAAACTGACAAGGAAATaGTTGCTTAGGGAATTCATG | + |
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Preference number: 2 (lower is better) Translates to: IDESQHMVYPKAIPLRSTKLTRK*LLREFM Trigger: CATGAATTCCCTAAGCAACCATTTCCTTGTCAGTTT...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR GCA 72 bp | AATGAGAGCCAAGAAAGCCTGGTTCTCCCCAACCAGTaGTGCCTCATTTTGTACCTCCCACGACATGATGAG | + |
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Preference number: 3 (lower is better) Translates to: NESQESLVLPNQ*CLILYLPRHDE Trigger: CTCATCATGTCGTGGGAGGTACAAAATGAGGCAGCACTGGTTGGGGAGAACCAGGCTTTCTTGGCTCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCGAATCCGTTCAGAAGTaGCTAAGCAGATTCTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: GILFGSQSYTYAKVGDQSESVQK*LSRFFG Trigger: ACCGAAGAATCTGCTTAGCAACTTCTGAACGGATTC...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR TCA 72 bp | GAGACAAGCATCTGTTCAACCGGCACGCAGTTAACCTaGTACTCATGTGTGGATGCAGAGGGAGAATCCGTT | + |
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Preference number: 3 (lower is better) Translates to: ETSICSTGTQLT*YSCVDAEGESV Trigger: AACGGATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAACAGATGCTTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR GCA 72 bp | AACCGGCACGCAGTTAACCTGATACTCATGTGTGGATaGAGAGGGAGAATCCGTTCAGAAGTTGCTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NRHAVNLILMCG*RGRIRSEVAKQ Trigger: CTGCTTAGCAACTTCTGAACGGATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR TCA 72 bp | GAGGAAATGAACCAAGGGCACAGGTTCCAGCATAGATaGATCTCAGCACATGGTGTATCCAAAAGCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: EEMNQGHRFQHR*ISAHGVSKSNP Trigger: GGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCAGCAACAAGGGATTTTaGATATGTTCACAAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: FNRHAVNLILMCGCRGRISNKGF*ICSQDS Trigger: GCTGTCTTGTGAACATATCAAAAATCCCTTGTTGCT...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR TCA 72 bp | TATCCACTCATCAGCACATCTCTCAGCATGAGGAAATaGACCAAGGGCACAGGTTCCAGCATAGATGAATCT | + |
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Preference number: 3 (lower is better) Translates to: YPLISTSLSMRK*TKGTGSSIDES Trigger: AGATTCATCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTCATGCTGAGAGATGTGCTGATGAGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR TCA 72 bp | GGCAATGAAGCAACTTCTAATGTTGTAGAGAAATGCTaGAGGTCAGGCATACTCTTCGGTTCACAGAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: GNEATSNVVEKC*RSGILFGSQSY Trigger: GTAGCTCTGTGAACCGAAGAGTATGCCTGACCTTCAGCATTTCTCTACAACATTAGAAGTTGCTTCATTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| 3UTR GCA 72 bp | ACAAGAAGGTTGTCTTTGAGAGATTTAGATGACTCATaGTTATGCATTAGACTGCCAGGTTTGGGCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TRRLSLRDLDDS*LCIRLPGLGKN Trigger: GTTTTTGCCCAAACCTGGCAGTCTAATGCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAGAGTACCAATGCCTTTaGTTCCTTTTAGAAACTGAC | + |
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Preference number: 3 (lower is better) Translates to: IDESQHMVYPKAIPLRSTEYQCL*FLLETD Trigger: GTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTC...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR GCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCATAACAAACACATACTaGAGCGGCACAACGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSITNTY*SGTTPR Trigger: CCTGGGCGTTGTGCCGCTGCAGTATGTGTTTGTTAT...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCGAGGGAAGCACAGTCTaGGTTCCATCCCATACCTTT | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSEGSTV*VPSHTF Trigger: AAAGGTATGGGATGGAACCCAGACTGTGCTTCCCTC...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCCGAAGCCAGAGCAGTTaGTTCCCTGAAGCTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSRSQSS*FPEAHF Trigger: AAAATGAGCTTCAGGGAATCAACTGCTCTGGCTTCG...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCAGTGTTCAGAATCCTTaGGGTAAGCTTCCAACACCC | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSSVQNP*GKLPTP Trigger: GGGTGTTGGAAGCTTACCTCAAGGATTCTGAACACT...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR GCA 90 bp | CAGCACATCTCTCAGCATGAGGAAATGAACCAAGGGCACAGGTTCCAGCATAGACGAGATGTGCTTGGATaGCCAAACCCGCAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QHISQHEEMNQGHRFQHRRDVLG*PNPQSF Trigger: GAAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCG...TCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTCATGCTGAGAGATGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR CCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCACAGGCATCACACTGTaGAACTTGCTGGACAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSTGITL*NLLDSL Trigger: TAAACTGTCCAGCAAGTTCCACAGTGTGATGCCTGT...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCCAGTTGAGGTCTCAGTaGCTGGCAAATTTGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRIQLRSQ*LANLHL Trigger: AAGGTGCAAATTTGCCAGTCACTGAGACCTCAACTG...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTGGATCTTCAGCCTGTaGAAGCGAACAATGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRIWIFSL*KRTMSP Trigger: TGGAGACATTGTTCGCTTCCACAGGCTGAAGATCCA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCAGAAGTTTAACAGACTaGGAAAGTCTCCTGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSRSLTD*ESLLGK Trigger: TTTGCCCAGGAGACTTTCCCAGTCTGTTAAACTTCT...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTGTAGCCGTTCGATGTaGCTCAAGTCACCTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRICSRSM*LKSPSK Trigger: TTTTGAAGGTGACTTGAGTCACATCGAACGGCTACA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTTATTTTTCACAAAATaGACAGCGACCTGCCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRILFFTK*TATCRP Trigger: CGGACGGCAGGTCGCTGTTCATTTTGTGAAAAATAA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCCTCCAACTTTATAAATaGTGGGGAGGGCTTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRILQLYK*WGGLHS Trigger: ACTATGAAGCCCTCCCCATCATTTATAAAGTTGGAG...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCGACATATCATATCCATaGTCGTTTCTAGACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSDISYP*SFLDFS Trigger: AGAGAAGTCTAGAAACGATCATGGATATGATATGTC...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTGGAACTTCTTGTACTaGATGACATTTAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRIWNFLY*MTFRTE Trigger: CTCTGTCCTAAATGTCATTCAGTACAAGAAGTTCCA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR GCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCGTCTGGAGCTTCAGTTaGAGCATCTTGCAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRIVWSFS*SILQNF Trigger: AAAATTTTGCAAGATGCTGCAACTGAAGCTCCAGAC...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCAACTTCACATTTGTCTaGTCCACAATTGTTACAACT | + |
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Preference number: 4 (lower is better) Translates to: GILFGSQSYTYAKVGDQSNFTFV*STIVTT Trigger: AGTTGTAACAATTGTGGACCAGACAAATGTGAAGTT...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCACTTCTTGTACTGAATaGCATTTAGGACAGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRITSCTE*HLGQRS Trigger: ACTTCTCTGTCCTAAATGTCATTCAGTACAAGAAGT...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTATAGGTTTCAAGCTTaGGCACTGTTTACATCCATA | + |
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Preference number: 4 (lower is better) Translates to: FNRHAVNLILMCGCRGRIYRFQA*ALFTSI Trigger: TATGGATGTAAACAGTGCTCAAGCTTGAAACCTATA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTGAGGGAAGCACAGTCTaGGTTCCATCCCATACCTTT | + |
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Preference number: 4 (lower is better) Translates to: REYQCLLFLLETDKEMVAEGSTV*VPSHTF Trigger: AAAGGTATGGGATGGAACCCAGACTGTGCTTCCCTC...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR CCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTACAAGGGCTTGTATCTaGCAAAACCCTAATGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSTRACI*QNPNAP Trigger: CGGGGCATTAGGGTTTTGCCAGATACAAGCCCTTGT...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR TCA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTCGAAGCCAGAGCAGTTaGTTCCCTGAAGCTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: REYQCLLFLLETDKEMVARSQSS*FPEAHF Trigger: AAAATGAGCTTCAGGGAATCAACTGCTCTGGCTTCG...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR TCA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTCAGTTGAGGTCTCAGTaGCTGGCAAATTTGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: REYQCLLFLLETDKEMVAQLRSQ*LANLHL Trigger: AAGGTGCAAATTTGCCAGTCACTGAGACCTCAACTG...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS-3UTR GCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAACGAGATGTGCTTGGATaGCCAAACCCGCAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQERDVLG*PNPQSF Trigger: GAAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCG...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
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| CDS-3UTR CCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTTGGATCTTCAGCCTGTaGAAGCGAACAATGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSWIFSL*KRTMSP Trigger: TGGAGACATTGTTCGCTTCCACAGGCTGAAGATCCA...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTTCCCCATTTTCTGATTaGCAGATACCAGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSSPFSD*QIPVEV Trigger: GACCTCAACTGGTATCTGTCAATCAGAAAATGGGGA...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAAACAAGGGCTTGTATCTaGCAAAACCCTAATGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQETRACI*QNPNAP Trigger: CGGGGCATTAGGGTTTTGCCAGATACAAGCCCTTGT...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTCTCCAACTTTATAAATaGTGGGGAGGGCTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: REYQCLLFLLETDKEMVALQLYK*WGGLHS Trigger: ACTATGAAGCCCTCCCCATCATTTATAAAGTTGGAG...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTGAGCAGTTGATTCCCTaGAGCTCATTTTTATACACT | + |
|
Preference number: 4 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSEQLIP*SSFLYT Trigger: AGTGTATAAAAATGAGCTTCAGGGAATCAACTGCTC...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR TCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACATGTAGCCGTTCGATGTaGCTCAAGTCACCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IDESQHMVYPKAIPLRSTCSRSM*LKSPSK Trigger: TTTTGAAGGTGACTTGAGTCACATCGAACGGCTACA...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAATCCCCATTTTCTGATTaGCAGATACCAGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQESPFSD*QIPVEV Trigger: GACCTCAACTGGTATCTGTCAATCAGAAAATGGGGA...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAAACTGGGAAAGTCTCCTaGGCAAATAGGATCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQETGKVS*ANRISV Trigger: AACTGAGATCCTATTTGCCCAGGAGACTTTCCCAGT...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR TCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACACAATTGTACCTTCCTTaGGTAGATTCAGGGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IDESQHMVYPKAIPLRSTQLYLP*VDSGVY Trigger: ATACACCCCTGAATCTACTCAAGGAAGGTACAATTG...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAACAATTGTACCTTCCTTaGGTAGATTCAGGGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQEQLYLP*VDSGVY Trigger: ATACACCCCTGAATCTACTCAAGGAAGGTACAATTG...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTTTAATGATTCAGAACTaGTGGTTTCTGAATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSLMIQN*WFLNFQ Trigger: CTGGAAATTCAGAAACCAGCAGTTCTGAATCATTAA...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACATCATTTTTATACACTTaGATCTTCAGCCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IDESQHMVYPKAIPLRSTSFLYT*IFSLWK Trigger: CTTCCACAGGCTGAAGATCCAAGTGTATAAAAATGA...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAATTAATGATTCAGAACTaGTGGTTTCTGAATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHRSKISSQCFINESQELMIQN*WFLNFQ Trigger: CTGGAAATTCAGAAACCAGCAGTTCTGAATCATTAA...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CCA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAACTTCACATTTGTCTaGTCCACAATTGTTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: IDESQHMVYPKAIPLRSTNFTFV*STIVTT Trigger: AGTTGTAACAATTGTGGACCAGACAAATGTGAAGTT...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| 3UTR CAA 72 bp | TGTACCTCCCACGACATGATGAGCAACAAGGGATTTTaGATATGTTCACAAGACAGCATAAATAACAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTSHDMMSNKGF*ICSQDSINNNK Trigger: TTTATTGTTATTTATGCTGTCTTGTGAACATATCAAAAATCCCTTGTTGCTCATCATGTCGTGGGAGGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| 3UTR CAA 72 bp | TATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTaGTCTTTGAGAGATTTAGATGACTCATGCTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: YPKAIPLRSTRR*SLRDLDDSCLC Trigger: GCATAAGCATGAGTCATCTAAATCTCTCAAAGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS GCA 90 bp | AACCATAACAAACACATACTGCAGCGGCACAACGCCCAGGGCTTCTaGCACAGAGGAAGGAGTCCACGGTCCTTTATGAAAACGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NHNKHILQRHNAQGF*HRGRSPRSFMKTGV Trigger: AACTCCCGTTTTCATAAAGGACCGTGGACTCCTTCCTCTGTGGCAGAAGCCCTGGGCGTTGTGCCGCTGCAGTATGTGTTTGTTATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCGCGGACTCGATATTGTaGAGGAGCTTTTTGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GILFGSQSYTYAKVGDQSADSIL*RSFLRQ Trigger: TTGACGCAAAAAGCTCCTCAACAATATCGAGTCCGC...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCGGCGCGGACTCGATATaGTTGAGGAGCTTTTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FNRHAVNLILMCGCRGRIGADSI*LRSFLR Trigger: ACGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCC...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCGCAATTGTACCTTCCTaGAGTAGATTCAGGGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GILFGSQSYTYAKVGDQSAIVPS*SRFRGV Trigger: TACACCCCTGAATCTACTCAAGGAAGGTACAATTGC...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACATCTCTCAGCATGAGGAAATGAACCAAGGGCACAGGTTCCAGCATAGAGATGGATCTCGCCACTaGAACGTGGTTATCGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QHISQHEEMNQGHRFQHRDGSRH*NVVIVD Trigger: GTCTACGATAACCACGTTCAAGTGGCGAGATCCATC...TCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTCATGCTGAGAGATGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS TCA 90 bp | AGACATTCACTTGAAGCAGGGAGAATGCCATTATTTTTCACAAAATaGACAGCGACCTGCCGTCCGCCCTGGTCTTCAGTGGTCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RHSLEAGRMPLFFTK*TATCRPPWSSVVQT Trigger: AGTCTGGACCACTGAAGACCAGGGCGGACGGCAGGTCGCTGTTCATTTTGTGAAAAATAATGGCATTCTCCCTGCTTCAAGTGAATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTTGTTGAGGAGCTTTTaGCGTCAAGATGGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FNRHAVNLILMCGCRGRILLRSF*RQDGTQ Trigger: CTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS GCA 90 bp | TTTTTGGTCCTGAGGAGTGAAGCTAAAAACTTTGCTGGAAGTGCGTaGTGTGACAGGCATCCCTACAGTCCCTTCAAATGTCAAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLVLRSEAKNFAGSA*CDRHPYSPFKCQRG Trigger: GCCTCTTTGACATTTGAAGGGACTGTAGGGATGCCTGTCACAGCACGCACTTCCAGCAAAGTTTTTAGCTTCACTCCTCAGGACCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCAGCTTCTACCATTTTTaGGTCCTGAGGAGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNRHAVNLILMCGCRGRISFYHF*VLRSEA Trigger: AGCTTCACTCCTCAGGACCAAAAAATGGTAGAAGCT...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS TCA 90 bp | GTCCCTTCAAATGTCAAAGAGGCGAAGCCAGAGCAGTTGATTCCCTaGAGCTCATTTTTATACACTTGGATCTTCAGCCTGTGGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VPSNVKEAKPEQLIP*SSFLYTWIFSLWKR Trigger: TCGCTTCCACAGGCTGAAGATCCAAGTGTATAAAAATGAGCTTCAGGGAATCAACTGCTCTGGCTTCGCCTCTTTGACATTTGAAGGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS CCA 90 bp | AAAGTTAGATCTTGTGTGGAGACTCTCCAGGAGGGAAGCACAGTCTaGGTTCCATCCCATACCTTTAGAAGAAATGCTGTGGAATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVRSCVETLQEGSTV*VPSHTFRRNAVEST Trigger: AGTGGATTCCACAGCATTTCTTCTAAAGGTATGGGATGGAACCCAGACTGTGCTTCCCTCCTGGAGAGTCTCCACACAAGATCTAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | GGCATACTCTTCGGTTCACAGAGCTACACTTACGCTAAAGTGGGCGACCAGAGCTTGTCTGGTCCACAATaGTTACAACTGAGCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: GILFGSQSYTYAKVGDQSLSGPQ*LQLSNN Trigger: ATTATTGCTCAGTTGTAACAATTGTGGACCAGACAA...GCTCTGGTCGCCCACTTTAGCGTAAGTGTAGCTCTGTGAACCGAAGAGTATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCGGCACGCAGTTAACCTGATACTCATGTGTGGATGCAGAGGGAGAATCTGTCTGGAGCTTCAGTaGCAGCATCTTGCAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: FNRHAVNLILMCGCRGRICLELQ*QHLAKF Trigger: AAATTTTGCAAGATGCTGCAACTGAAGCTCCAGACA...GATTCTCCCTCTGCATCCACACATGAGTATCAGGTTAACTGCGTGCCGGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS TCA 90 bp | ATTCCTGGGGGACATATCATATCCATGATCGTTTCTAGACTTCTCTaGAGGTCGTCATCAGTGAGGACTTCAGATGCTGGGATCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IPGGHIISMIVSRLL*RSSSVRTSDAGILK Trigger: TTTCAAGATCCCAGCATCTGAAGTCCTCACTGATGACGACCTTCAGAGAAGTCTAGAAACGATCATGGATATGATATGTCCCCCAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACATCTCTCAGCATGAGGAAATGAACCAAGGGCACAGGTTCCAGCATAGAAGGTTAACTTCACATTaGTCTGGTCCACAATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QHISQHEEMNQGHRFQHRRLTSH*SGPQLL Trigger: TAACAATTGTGGACCAGACAAATGTGAAGTTAACCT...TCTATGCTGGAACCTGTGCCCTTGGTTCATTTCCTCATGCTGAGAGATGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS CCA 90 bp | GTTTTGTATGGAGGCTATAGAGTCTTAGAAAGCATCCAACCTCGATaGATCTCGCCACTTGAACGTGGTTATCGTAGACTAGAATGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VLYGGYRVLESIQPR*ISPLERGYRRLECL Trigger: TAGACATTCTAGTCTACGATAACCACGTTCAAGTGGCGAGATCCATCGAGGTTGGATGCTTTCTAAGACTCTATAGCCTCCATACAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTAGCTTCTACCATTTTTaGGTCCTGAGGAGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: REYQCLLFLLETDKEMVASFYHF*VLRSEA Trigger: AGCTTCACTCCTCAGGACCAAAAAATGGTAGAAGCT...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAAGATGGATCTCGCCACTaGAACGTGGTTATCGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KQHRSKISSQCFINESQEDGSRH*NVVIVD Trigger: GTCTACGATAACCACGTTCAAGTGGCGAGATCCATC...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATGAATCTCAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAGCAATTGTACCTTCCTaGAGTAGATTCAGGGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IDESQHMVYPKAIPLRSTAIVPS*SRFRGV Trigger: TACACCCCTGAATCTACTCAAGGAAGGTACAATTGC...TGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTGAGATTCATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGTACCAATGCCTTTTGTTCCTTTTAGAAACTGACAAGGAAATGGTTGCTCTCATTTTTATACACTaGGATCTTCAGCCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: REYQCLLFLLETDKEMVALIFIH*DLQPVE Trigger: TTCCACAGGCTGAAGATCCAAGTGTATAAAAATGAG...AGCAACCATTTCCTTGTCAGTTTCTAAAAGGAACAAAAGGCATTGGTACTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAAATCACACTGTGGAACTaGCTGGACAGTTTAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: KQHRSKISSQCFINESQEITLWN*LDSLET Trigger: AGTCTCTAAACTGTCCAGCAAGTTCCACAGTGTGAT...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACATGGTGTATCCAAAAGCAATCCCATTAAGATCAACAAGAAGGTTGTCTTTGTCTGGTCCACAATaGTTACAACTGAGCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: QHMVYPKAIPLRSTRRLSLSGPQ*LQLSNN Trigger: ATTATTGCTCAGTTGTAACAATTGTGGACCAGACAA...AGACAACCTTCTTGTTGATCTTAATGGGATTGCTTTTGGATACACCATGTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAACTCATTTTTATACACTaGGATCTTCAGCCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQHRSKISSQCFINESQELIFIH*DLQPVE Trigger: TTCCACAGGCTGAAGATCCAAGTGTATAAAAATGAG...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAACAGTGGTCCAGACTTTaGAATAATACAATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KQHRSKISSQCFINESQEQWSRL*NNTMMS Trigger: CGACATCATTGTATTATTCAAAAGTCTGGACCACTG...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGCACAGAAGTAAAATCAGCTCCCAGTGTTTTATAAATGAGAGCCAAGAAAAATTAGACATTCACTaGAAGCAGGGAGAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KQHRSKISSQCFINESQEKLDIH*KQGECH Trigger: ATGGCATTCTCCCTGCTTCAAGTGAATGTCTAATTT...TTCTTGGCTCTCATTTATAAAACACTGGGAGCTGATTTTACTTCTGTGCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115330.8 |
||
| CDS CAA 72 bp | ACTGCATGGGCTGCGCATCGCACAGCTGCACTAAAGTaGAAGACGCCGAGATGTGCTTGGATGCCCAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: TAWAAHRTAALK*KTPRCAWMPKP Trigger: GGGTTTGGGCATCCAAGCACATCTCGGCGTCTTCAACTTTAGTGCAGCTGTGCGATGCGCAGCCCATGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS CAA 90 bp | GGTCGTAATACTGCATGGGCTGCGCATCGCACAGCTGCACTAAAGTaGAAGACGCCGAGATGTGCTTGGATGCCCAAACCCGCAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRNTAWAAHRTAALK*KTPRCAWMPKPAKL Trigger: AAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCGGCGTCTTCAACTTTAGTGCAGCTGTGCGATGCGCAGCCCATGCAGTATTACGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS GCA 72 bp | TCGCACAGCTGCACTAAAGTTGAAGACGCCGAGATGTaGTTGGATGCCCAAACCCGCAAAGCTTCTACCATT | + |
|
Preference number: 6 (lower is better) Translates to: SHSCTKVEDAEM*LDAQTRKASTI Trigger: AATGGTAGAAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCGGCGTCTTCAACTTTAGTGCAGCTGTGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS CCA 72 bp | TCTTGTGTGGAGACTCTCCAGGAGGGAAGCACAGTCTaGGTTCCATCCCATACCTTTAGAAGAAATGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCVETLQEGSTV*VPSHTFRRNAV Trigger: CACAGCATTTCTTCTAAAGGTATGGGATGGAACCCAGACTGTGCTTCCCTCCTGGAGAGTCTCCACACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
||
| CDS CCA 72 bp | ACTGGGAAAGTCTCCTGGGCAAATAGGATCTCAGTTTaGCGCGGACTCGATATTGTTGAGGAGCTTTTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TGKVSWANRISV*RGLDIVEELFA Trigger: CGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCCAAACTGAGATCCTATTTGCCCAGGAGACTTTCCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 72 bp | GGGCAAATAGGATCTCAGTTTGGCGCGGACTCGATATaGTTGAGGAGCTTTTTGCGTCAAGATGGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: GQIGSQFGADSI*LRSFLRQDGTQ Trigger: CTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCCAAACTGAGATCCTATTTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 90 bp | CGAGATGTGCTTGGATGCCCAAACCCGCAAAGCTTCTACCATTTTTaGGTCCTGAGGAGTGAAGCTAAAAACTTTGCTGGAAGTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RDVLGCPNPQSFYHF*VLRSEAKNFAGSAC Trigger: GCACGCACTTCCAGCAAAGTTTTTAGCTTCACTCCTCAGGACCAAAAAATGGTAGAAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 90 bp | TCTCCTGGGCAAATAGGATCTCAGTTTGGCGCGGACTCGATATTGTaGAGGAGCTTTTTGCGTCAAGATGGCACACAGTGGTGTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPGQIGSQFGADSIL*RSFLRQDGTQWCFL Trigger: GAGAAAACACCACTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCCAAACTGAGATCCTATTTGCCCAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CCA 72 bp | TGTGACTCAAGTCACCTTCAAAAGTTAGATCTTGTGTaGAGACTCTCCAGGAGGGAAGCACAGTCTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CDSSHLQKLDLV*RLSRREAQSGF Trigger: GAACCCAGACTGTGCTTCCCTCCTGGAGAGTCTCCACACAAGATCTAACTTTTGAAGGTGACTTGAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 72 bp | CACAGCTGCACTAAAGTTGAAGACGCCGAGATGTGCTaGGATGCCCAAACCCGCAAAGCTTCTACCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: HSCTKVEDAEMC*DAQTRKASTIF Trigger: AAAAATGGTAGAAGCTTTGCGGGTTTGGGCATCCAAGCACATCTCGGCGTCTTCAACTTTAGTGCAGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 72 bp | CAAATAGGATCTCAGTTTGGCGCGGACTCGATATTGTaGAGGAGCTTTTTGCGTCAAGATGGCACACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QIGSQFGADSIL*RSFLRQDGTQW Trigger: CCACTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCCAAACTGAGATCCTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 90 bp | AAGTCTCCTGGGCAAATAGGATCTCAGTTTGGCGCGGACTCGATATaGTTGAGGAGCTTTTTGCGTCAAGATGGCACACAGTGGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: KSPGQIGSQFGADSI*LRSFLRQDGTQWCF Trigger: AAAACACCACTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAATATCGAGTCCGCGCCAAACTGAGATCCTATTTGCCCAGGAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CCA 72 bp | GGAGGCTATAGAGTCTTAGAAAGCATCCAACCTCGATaGATCTCGCCACTTGAACGTGGTTATCGTAGACTA | + |
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Preference number: 6 (lower is better) Translates to: GGYRVLESIQPR*ISPLERGYRRL Trigger: TAGTCTACGATAACCACGTTCAAGTGGCGAGATCCATCGAGGTTGGATGCTTTCTAAGACTCTATAGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | GAGTTTGATAGTGCAGAGCTGTCCCCATTTTCTGATTaGCAGATACCAGTTGAGGTCTCAGTGACTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: EFDSAELSPFSD*QIPVEVSVTGK Trigger: TTTGCCAGTCACTGAGACCTCAACTGGTATCTGTCAATCAGAAAATGGGGACAGCTCTGCACTATCAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | GGACATATCATATCCATGATCGTTTCTAGACTTCTCTaGAGGTCGTCATCAGTGAGGACTTCAGATGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GHIISMIVSRLL*RSSSVRTSDAG Trigger: CCCAGCATCTGAAGTCCTCACTGATGACGACCTTCAGAGAAGTCTAGAAACGATCATGGATATGATATGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 72 bp | CTTGGATGCCCAAACCCGCAAAGCTTCTACCATTTTTaGGTCCTGAGGAGTGAAGCTAAAAACTTTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGCPNPQSFYHF*VLRSEAKNFAG Trigger: TCCAGCAAAGTTTTTAGCTTCACTCCTCAGGACCAAAAAATGGTAGAAGCTTTGCGGGTTTGGGCATCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 90 bp | GGCGAAGCCAGAGCAGTTGATTCCCTGAAGCTCATTTTTATACACTaGGATCTTCAGCCTGTGGAAGCGAACAATGTCTCCAACTTTATA | + |
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Preference number: 6 (lower is better) Translates to: GEARAVDSLKLIFIH*DLQPVEANNVSNFI Trigger: TATAAAGTTGGAGACATTGTTCGCTTCCACAGGCTGAAGATCCAAGTGTATAAAAATGAGCTTCAGGGAATCAACTGCTCTGGCTTCGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | AATGTCAAAGAGGCGAAGCCAGAGCAGTTGATTCCCTaGAGCTCATTTTTATACACTTGGATCTTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NVKEAKPEQLIP*SSFLYTWIFSL Trigger: CAGGCTGAAGATCCAAGTGTATAAAAATGAGCTTCAGGGAATCAACTGCTCTGGCTTCGCCTCTTTGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | AGAATGTCTACCACCAGACTCTGTAGCCGTTCGATGTaGCTCAAGTCACCTTCAAAAGTTAGATCTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMSTTRLCSRSM*LKSPSKVRSCV Trigger: CACACAAGATCTAACTTTTGAAGGTGACTTGAGTCACATCGAACGGCTACAGAGTCTGGTGGTAGACATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | GCTTCTGCCACAGAGGAAGGAGTCCACGGTCCTTTATaGAAACGGGAGTTTAGATTTTGTATAGGTTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: ASATEEGVHGPL*KREFRFCIGFK Trigger: CTTGAAACCTATACAAAATCTAAACTCCCGTTTTCATAAAGGACCGTGGACTCCTTCCTCTGTGGCAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | TTACTTGATAGTGCAGAGCTGTCCCCATTTTCTGATTaGCAGATACCAGTTGAGGTCTCAGTGACTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLDSAELSPFSD*QIPVEVSVTGK Trigger: TTTGCCAGTCACTGAGACCTCAACTGGTATCTGTCAATCAGAAAATGGGGACAGCTCTGCACTATCAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115327.8 |
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| CDS CAA 72 bp | AGAGCAGTTGATTCCCTGAAGCTCATTTTTATACACTaGGATCTTCAGCCTGTGGAAGCGAACAATGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RAVDSLKLIFIH*DLQPVEANNVS Trigger: GGAGACATTGTTCGCTTCCACAGGCTGAAGATCCAAGTGTATAAAAATGAGCTTCAGGGAATCAACTGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | TCACAACACCATAGACATTGGCAATTGTACCTTCCTTaGGTAGATTCAGGGGTGTATATGTATAGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQHHRHWQLYLP*VDSGVYMYREL Trigger: CAGCTCCCTATACATATACACCCCTGAATCTACTCAAGGAAGGTACAATTGCCAATGTCTATGGTGTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS GCA 72 bp | CGTGGAGATGGAACTCCAGCCTTAATGATTCAGAACTaGTGGTTTCTGAATTTCCAGGCTGAAGTTTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RGDGTPALMIQN*WFLNFQAEVLY Trigger: ATACAAAACTTCAGCCTGGAAATTCAGAAACCAGCAGTTCTGAATCATTAAGGCTGGAGTTCCATCTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CCA 72 bp | GGAGATGGAACTCCAGCCTTAATGATTCAGAACTGCTaGTTTCTGAATTTCCAGGCTGAAGTTTTGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: GDGTPALMIQNC*FLNFQAEVLYG Trigger: TCCATACAAAACTTCAGCCTGGAAATTCAGAAACCAGCAGTTCTGAATCATTAAGGCTGGAGTTCCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CCA 72 bp | GGACTCGATATTGTTGAGGAGCTTTTTGCGTCAAGATaGCACACAGTGGTGTTTTCTCTAAATGTTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: GLDIVEELFASR*HTVVFSLNVGD Trigger: ATCACCAACATTTAGAGAAAACACCACTGTGTGCCATCTTGACGCAAAAAGCTCCTCAACAATATCGAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | TCCAAACTGTCCCCATGTGGAACTTCTTGTACTGAATaGCATTTAGGACAGAGAAGTTTAACAGACTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SKLSPCGTSCTE*HLGQRSLTDWE Trigger: TTCCCAGTCTGTTAAACTTCTCTGTCCTAAATGTCATTCAGTACAAGAAGTTCCACATGGGGACAGTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS TCA 72 bp | CATCAACTTTTATTCCTGGGGGACATATCATATCCATaGTCGTTTCTAGACTTCTCTGAAGGTCGTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: HQLLFLGDISYP*SFLDFSEGRHQ Trigger: CTGATGACGACCTTCAGAGAAGTCTAGAAACGATCATGGATATGATATGTCCCCCAGGAATAAAAGTTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115330.8 ENSMUST00000166445.8 |
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| CDS CAA 72 bp | CAGAACTGCTGGTTTCTGAATTTCCAGGCTGAAGTTTaGTATGGAGGCTATAGAGTCTTAGAAAGCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: QNCWFLNFQAEV*YGGYRVLESIQ Trigger: TTGGATGCTTTCTAAGACTCTATAGCCTCCATACAAAACTTCAGCCTGGAAATTCAGAAACCAGCAGTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115327.8 ENSMUST00000115330.8 ENSMUST00000166445.8 |
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