Pregenerated sensors for POP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030423Ensembl transcript IDs: ENSMUST00000032585.8, ENSMUST00000205753.2, ENSMUST00000205899.2, ENSMUST00000206221.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTTGGCTCATGTaGGGTATGCTCTGCTTCAGGAAGGCCCGCACAAAGGCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GALRCRWLSQSSWLM*GMLCFRKARTKASA Trigger: GGCTGAGGCCTTTGTGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205753.2 |
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| 3UTR TCA 90 bp | ACGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTTGGCTCATGTaGGGTATGCTCTGCTTCAGGAAGGCCCGCACAAAGGCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TALRCRWLSQSSWLM*GMLCFRKARTKASA Trigger: GGCTGAGGCCTTTGTGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
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| 3UTR GCA 90 bp | TGGAGTGCTGGCCCAGTTCCAATGGTACTGGCAGATCTGGCCCTCTaGCCCATTCTGACTACTGTAGCCAAATCTGAGCCATCTAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: WSAGPVPMVLADLAL*PILTTVAKSEPSSK Trigger: CTTGCTAGATGGCTCAGATTTGGCTACAGTAGTCAGAATGGGGCAGAGGGCCAGATCTGCCAGTACCATTGGAACTGGGCCAGCACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR CCA 90 bp | ACCAGGTTTCAACTACAAGGCTTTCATGATACCAGCCTGGAGTGCTaGCCCAGTTCCAATGGTACTGGCAGATCTGGCCCTCTGCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: TRFQLQGFHDTSLEC*PSSNGTGRSGPLPH Trigger: ATGGGGCAGAGGGCCAGATCTGCCAGTACCATTGGAACTGGGCCAGCACTCCAGGCTGGTATCATGAAAGCCTTGTAGTTGAAACCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAATCATCTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATCCAAGATCACGGCCTTaGGCTGCAGATGGCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LNHLWLRVRLEPIAQVPDPRSRP*AADGSH Trigger: GTGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGG...ATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAGATGATTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR CAA 90 bp | TGGCTTCCACGGGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: WLPRGLALQMALTVF*AHVRYALLQEGPHK Trigger: TTTGTGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCCCGTGGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205753.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCAGAGTTCCTTAAGAGTGGCACTCCCTATGGGTCAAGCATTCACACACGACGGGAGGTGGCCATaGGGTGAGGGAGCCACAACC | + |
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Preference number: 2 (lower is better) Translates to: QGQSSLRVALPMGQAFTHDGRWP*GEGATT Trigger: GGTTGTGGCTCCCTCACCCCATGGCCACCTCCCGTC...GTGTGTGAATGCTTGACCCATAGGGAGTGCCACTCTTAAGGAACTCTGGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | AATCATCTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATGTAGCCTTGCGCTGCAGATaGCTCTCACAGTCTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NHLWLRVRLEPIAQVPDVALRCR*LSQSSW Trigger: CCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGC...TACATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAGATGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATACCAGCCTGGAGTGCTGGCCCAGTTCCAATGGTACTGGCAGATCTGGCCGCCCCCTTCTTCAGATaGCCCAAGGTTAATCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MIPAWSAGPVPMVLADLAAPFFR*PKVNPG Trigger: ACCAGGATTAACCTTGGGTCATCTGAAGAAGGGGGC...GGCCAGATCTGCCAGTACCATTGGAACTGGGCCAGCACTCCAGGCTGGTATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR CAA 90 bp | TTCCAAGATCACGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: FQDHGLALQMALTVF*AHVRYALLQEGPHK Trigger: TTTGTGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTCCAGTGTCACATCTCCTCCAACAAGGCCAGAGTTCCTTAAGAGTGGCCCCCTCTGTTTTCCCTaGACTACAGACGGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: HLSSVTSPPTRPEFLKSGPLCFP*TTDGLQ Trigger: CTGTAGCCCGTCTGTAGTCCAGGGAAAACAGAGGGG...GCCACTCTTAAGGAACTCTGGCCTTGTTGGAGGAGATGTGACACTGGAGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATGTACTGTTTCTGGCAGAGAGGCCTTTaGATTTCTTCTTTGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CGCVSGLSPLHRSRMYCFWQRGL*ISSLAL Trigger: CAAGGCCAAAGAAGAAATCCAAAGGCCTCTCTGCCA...GAAACAGTACATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR CAA 90 bp | TCTGGAGGCAGCCTGGAGGAGACTGCATTCCAGACCATGCAAAGCTaGATCACATACCTGAGACTTCAAAGCCCACCTCTCCAGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SGGSLEETAFQTMQS*ITYLRLQSPPLQCH Trigger: GTGACACTGGAGAGGTGGGCTTTGAAGTCTCAGGTATGTGATCAAGCTTTGCATGGTCTGGAATGCAGTCTCCTCCAGGCTGCCTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTATCGGAGACGGGAGGTaGCCATGGGGTGAGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VTCVARRISELAGRHLLLIGDGR*PWGEGA Trigger: GGCTCCCTCACCCCATGGCCACCTCCCGTCTCCGAT...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCTCCAGTGTCACATCTCCTCCAACAAGGCCAGAGTTCCTTAAGAGTGGCTCCCGAGTTGTTCGATaGTCTTCAGCCCCTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: HLSSVTSPPTRPEFLKSGSRVVR*SSAPLF Trigger: AAACAGAGGGGCTGAAGAGCATCGAACAACTCGGGA...GCCACTCTTAAGGAACTCTGGCCTTGTTGGAGGAGATGTGACACTGGAGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTACAAGCAAGGGGCGATACCAGCCTGGAGTaGTGGCCCAGTTCCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: PGEFLSWLADICFLQARGDTSLE*WPSSNG Trigger: ACCATTGGAACTGGGCCAGCACTCCAGGCTGGTATC...GCCCCTTGCTTGTAAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATGTACTGTTTGTATCTCTGTTGCTCTaGTTTAATGTCAAAGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: LWLRVRLEPIAQVPDVLFVSLLL*FNVKEP Trigger: CGGCTCTTTGACATTAAACCAGAGCAACAGAGATAC...AAACAGTACATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCGCCTCCCTGTGAGTGGTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGGGTTTGGAGCTGAGATaGCTTCCAGTCAGATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PPPPCEWLHVLPGEFLSWGLELR*LPVRSD Trigger: ATCAGATCTGACTGGAAGTCATCTCAGCTCCAAACC...CCAACTCAGAAATTCTCCTGGCAACACATGTAACCACTCACAGGGAGGCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACGAGCCATCCAGGAAGTaGCCCCACCAGCACCACCGC | + |
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Preference number: 2 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNEPSRK*PHQHHR Trigger: GCGGTGGTGCTGGTGGGGTCACTTCCTGGATGGCTC...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCTATCACGGCCTTGCGCTaGAGATGGCTCTCACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: RNRLYLCCSGLMSKSRMSITALR*RWLSQS Trigger: AGACTGTGAGAGCCATCTGCAGCGCAAGGCCGTGAT...AGACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCTCTCCTCTGTTTGGCTCTTCTTGGCTCATGTaGGGTATGCTCTGCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLLLWFNVKEPHVSPLFGSSWLM*GMLCFR Trigger: CCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGA...GCCAAACAGAGGAGAGACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTACCAGCCTGGAGTGCTaGCCCAGTTCCAATGGTACT | + |
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Preference number: 2 (lower is better) Translates to: VTCVARRISELAGRHLLLTSLEC*PSSNGT Trigger: AGTACCATTGGAACTGGGCCAGCACTCCAGGCTGGT...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTGCAGATCTGGCCCTCTaGCCCATTCTGACTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VTCVARRISELAGRHLLLADLAL*PILTTV Trigger: TACAGTAGTCAGAATGGGGCAGAGGGCCAGATCTGC...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGACATGTTTGGTCTCCTGCAGAAGGATTCCTGTAACTCCCACATAGGAGGGTGGCAGAGAGGCCTTTaGATTTCTTCTTTGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KDMFGLLQKDSCNSHIGGWQRGL*ISSLAL Trigger: CAAGGCCAAAGAAGAAATCCAAAGGCCTCTCTGCCA...CCCTCCTATGTGGGAGTTACAGGAATCCTTCTGCAGGAGACCAAACATGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGCACAGGTCCCGGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAACAGTATCTCTGTTGCTCTaGTTTAATGTCAAAGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: HCTGPGCTVSRVHGEGGTVSLLL*FNVKEP Trigger: CGGCTCTTTGACATTAAACCAGAGCAACAGAGATAC...TGTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCCGGGACCTGTGCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR CAA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTaGCTTCTTACAAGCAAGGGGCAAGTGATTCCTGTGAACCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: VTCVARRISELAGRH*LLTSKGQVIPVNQV Trigger: AACCTGGTTCACAGGAATCACTTGCCCCTTGCTTGTAAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACAGCCATTTATGCCCGTaGTCTGGTTTTATTATTATT | + |
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Preference number: 2 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNSHLCP*SGFIII Trigger: AATAATAATAAAACCAGACCACGGGCATAAATGGCT...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATGTACTGATTTCTTCTTTGGCCTaGGCCTTGGCTTTAGGCGAG | + |
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Preference number: 3 (lower is better) Translates to: HLWLRVRLEPIAQVPDVLISSLA*ALALGE Trigger: CTCGCCTAAAGCCAAGGCCAAGGCCAAAGAAGAAAT...CAGTACATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR TCA 72 bp | CGCTGCAGATGGCTCTCACAGTCTTCTTGGCTCATGTaGGGTATGCTCTGCTTCAGGAAGGCCCGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: RCRWLSQSSWLM*GMLCFRKARTK Trigger: CTTTGTGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000205753.2 ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR GCA 72 bp | GGCCCAGTTCCAATGGTACTGGCAGATCTGGCCCTCTaGCCCATTCTGACTACTGTAGCCAAATCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GPVPMVLADLAL*PILTTVAKSEP Trigger: TGGCTCAGATTTGGCTACAGTAGTCAGAATGGGGCAGAGGGCCAGATCTGCCAGTACCATTGGAACTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR CCA 72 bp | GAAGTGACCCCACCAGCACCACCGCCTCCCTGTGAGTaGTTACATGTGTTGCCAGGAGAATTTCTGAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: EVTPPAPPPPCE*LHVLPGEFLSW Trigger: CCAACTCAGAAATTCTCCTGGCAACACATGTAACCACTCACAGGGAGGCGGTGGTGCTGGTGGGGTCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR CCA 72 bp | GAGTTGTTCGATGCTCTTCAGCCCCTCTGTTTTCCCTaGACTACAGACGGGCTACAGCCAGAGGCTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: ELFDALQPLCFP*TTDGLQPEALQ Trigger: TTGAAGAGCCTCTGGCTGTAGCCCGTCTGTAGTCCAGGGAAAACAGAGGGGCTGAAGAGCATCGAACAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | CCCATTGCACAGGTCCCGGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: PIAQVPDVLFPEFMEREEALTVF*AHVRYA Trigger: AGCATACCTCACATGAGCCAAGAAGACTGTGAGAGC...TTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCCGGGACCTGTGCAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATTCCAAGATCACGGCCTaGCGCTGCAGATGGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: REEQAVSLLLWFNVKEPHSKITA*RCRWLS Trigger: TGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGGA...ATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTCCCGGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAACAGGCTGTATTGGCAGAGAGGCCTTaGGATTTCTTCTTTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: QVPDVLFPEFMEREEQAVLAERP*DFFFGL Trigger: AAGGCCAAAGAAGAAATCCAAAGGCCTCTCTGCCAA...TACAGCCTGTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCCGGGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR TCA 72 bp | TTAGCCTTACTCATTTCTCTTCCACTCAGTGTGATCTaGGTCGGAGCCATCCAGGAAGTGACCCCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LALLISLPLSVI*VGAIQEVTPPA Trigger: TGCTGGTGGGGTCACTTCCTGGATGGCTCCGACTCAGATCACACTGAGTGGAAGAGAAATGAGTAAGGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR CCA 72 bp | CCAGGTTTCAACTACAAGGCTTTCATGATACCAGCCTaGAGTGCTGGCCCAGTTCCAATGGTACTGGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: PGFNYKAFMIPA*SAGPVPMVLAD Trigger: ATCTGCCAGTACCATTGGAACTGGGCCAGCACTCCAGGCTGGTATCATGAAAGCCTTGTAGTTGAAACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGGCCAGAGTTCCTTAAGAGTGGCACTCCCTATGGGTCAAGCATTCACACACCAGAAGTACAGGAATTaGAAGCCATTTATGCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: QGQSSLRVALPMGQAFTHQKYRN*KPFMPV Trigger: CACGGGCATAAATGGCTTCAAATTCCTGTACTTCTG...GTGTGTGAATGCTTGACCCATAGGGAGTGCCACTCTTAAGGAACTCTGGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: REEQAVSLLLWFNVKEPHALTVF*AHVRYA Trigger: AGCATACCTCACATGAGCCAAGAAGACTGTGAGAGC...ATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCATTTCTTCTTTGGCCTaGGCCTTGGCTTTAGGCGAG | + |
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Preference number: 3 (lower is better) Translates to: EEQAVSLLLWFNVKEPHVISSLA*ALALGE Trigger: CTCGCCTAAAGCCAAGGCCAAGGCCAAAGAAGAAAT...GACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
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| 3UTR TCA 72 bp | AGAGCAGCAAAGTGTAGGCAGCTCAGGGTTTGGAGCTaGGATGACTTCCAGTCAGATCTGATGTTTCATACC | + |
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Preference number: 3 (lower is better) Translates to: RAAKCRQLRVWS*DDFQSDLMFHT Trigger: GGTATGAAACATCAGATCTGACTGGAAGTCATCTCAGCTCCAAACCCTGAGCTGCCTACACTTTGCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR TCA 72 bp | ACAGCACCATTTAAACAGTCATGGTGCTGGAGAAGCTaGGAGTTGGACATTTTGATCTGGAGGCAGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TAPFKQSWCWRS*ELDILIWRQPG Trigger: TCCAGGCTGCCTCCAGATCAAAATGTCCAACTCTCAGCTTCTCCAGCACCATGACTGTTTAAATGGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR TCA 72 bp | CCCCCTTCCTTTCAACCCAGCAGAAGTACAGGAATTTaGAGCCATTTATGCCCGTGGTCTGGTTTTATTATT | + |
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Preference number: 3 (lower is better) Translates to: PPSFQPSRSTGI*SHLCPWSGFII Trigger: AATAATAAAACCAGACCACGGGCATAAATGGCTTCAAATTCCTGTACTTCTGCTGGGTTGAAAGGAAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACAGGAGAATTTCTGAGTaGGCTGGCAGACATTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNRRISE*AGRHLL Trigger: AAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCT...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTGATGATCTTAAAGACATGTTTGGTCTCCTGCAGAAGGATTCCTGTAACTCAGGCTGTATCTCTGTaGCTCTGGTTTAATGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LVMILKTCLVSCRRIPVTQAVSL*LWFNVK Trigger: TTTGACATTAAACCAGAGCAACAGAGATACAGCCTG...AGTTACAGGAATCCTTCTGCAGGAGACCAAACATGTCTTTAAGATCATCACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
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| CDS-3UTR TCA 90 bp | CCACCGCCTCCCTGTGAGTGGTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGGCTGCGTGTCCGGCTTaGGCCCATTGCACAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPCEWLHVLPGEFLSWAACPA*AHCTGP Trigger: GGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGC...CCAACTCAGAAATTCTCCTGGCAACACATGTAACCACTCACAGGGAGGCGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTTGTTCGATGCTCTTCAGCCCCTCTGTTTTCCCTGGACTACAGACGGGCTAAGGCCTCAGCCCGCTaGCTTCCCAGCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVVRCSSAPLFSLDYRRAKASAR*LPSSCT Trigger: TGTGCAGGAGCTGGGAAGCCAGCGGGCTGAGGCCTT...AGCCCGTCTGTAGTCCAGGGAAAACAGAGGGGCTGAAGAGCATCGAACAACTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTGAATCATCTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGAAATGGGCTGAGCACTaGCCAGGATACAGAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLNHLWLRVRLEPIAQVPKWAEH*PGYRSK Trigger: CTTGCTTCTGTATCCTGGTCAGTGCTCAGCCCATTT...CGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAGATGATTCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCATTGCACAGGTCCCGGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGCAGGTGGGCACAGGCTaGCATTTCCTGCAGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPIAQVPDVLFPEFMEREQVGTG*HFLQSG Trigger: CCCACTCTGCAGGAAATGGCAGCCTGTGCCCACCTG...CTCCCTCTCCATGAACTCTGGAAACAGTACATCCGGGACCTGTGCAATGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| 3UTR CAA 72 bp | CGGGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLALQMALTVF*AHVRYALLQEG Trigger: GCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205753.2 |
||
| 3UTR CAA 72 bp | CACGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGLALQMALTVF*AHVRYALLQEG Trigger: GCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCGCACAGGCTGCCATTTCCTaGAGAGTGGGAGATGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSLLGSCEVCSASGRPAQAAIS*RVGDDG Trigger: CCCGTCATCTCCCACTCTGCAGGAAATGGCAGCCTG...TGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGATCACGGCCTTGCGCTGCAGATGGCTCTCACAGTCTTCTTGGCTCATCAGGTGGGCACAGGCTaGCATTTCCTGCACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQDHGLALQMALTVFLAHQVGTG*HFLHIV Trigger: CACGATGTGCAGGAAATGGCAGCCTGTGCCCACCTG...ATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCAAGACTGGCTTCAGGTaGGCACAGGCTGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSLLGSCEVCSASGRPKTGFR*AQAAIS Trigger: GGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTT...GGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000205753.2 ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCTCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCAGGTGGGCACAGGCTaGCATTTCCTGCACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DGSHSLLGSCEVCSASGRQVGTG*HFLHIV Trigger: CACGATGTGCAGGAAATGGCAGCCTGTGCCCACCTG...CCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
||
| 3UTR CAA 72 bp | CCAGCACCACCGCCTCCCTGTGAGTGGTTACATGTGTaGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: PAPPPPCEWLHV*PGEFLSWLADI Trigger: AATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAACCACTCACAGGGAGGCGGTGGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCAGAGTTCCTTAAGAGTGGCACTCCCTATGGGTCAAGCATTCACACACATCACGGCCTTGCGCTaGAGATGGCTCTCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQSSLRVALPMGQAFTHITALR*RWLSQS Trigger: AGACTGTGAGAGCCATCTGCAGCGCAAGGCCGTGAT...GTGTGTGAATGCTTGACCCATAGGGAGTGCCACTCTTAAGGAACTCTGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATCATCTGTGGCTGCGTGTCCGGCTTGAGCCCATTGCACAGGTCCCGGATGCACATCGTGGTCCTTaGCTTCTTTATGAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNHLWLRVRLEPIAQVPDAHRGP*LLYEKR Trigger: CCTTTTCTCATAAAGAAGCCAAGGACCACGATGTGC...ATCCGGGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCCACAGATGATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTACAAGCAAGGGGCGGCAGACCGCTCACTTaGCCGAAGCTGGAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGEFLSWLADICFLQARGGRPLT*PKLEFA Trigger: AGCAAATTCCAGCTTCGGGCAAGTGAGCGGTCTGCC...GCCCCTTGCTTGTAAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTACAAGCAAGGGGCGCCTTGCGCTGCAGATaGCTCTCACAGTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGEFLSWLADICFLQARGALRCR*LSQSSW Trigger: CCAAGAAGACTGTGAGAGCCATCTGCAGCGCAAGGC...GCCCCTTGCTTGTAAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | AGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCTCAAGTCCCTCAGAGCTaGCTCTGGTGCCCTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RNRLYLCCSGLMSKSRMSQVPQS*LWCPAH Trigger: ATGTGCAGGGCACCAGAGTCAGCTCTGAGGGACTTG...AGACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGATGGCTCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAAAATGGGCTGAGCACTaGCCAGGATACAGAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AADGSHSLLGSCEVCSASKWAEH*PGYRSK Trigger: CTTGCTTCTGTATCCTGGTCAGTGCTCAGCCCATTT...TGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCATCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCAACCCAGCAGAAGTACAGGAATTTGAAGCCATTTATGCCCGTGGTCCCAAGATCACGGCCTTaGGCTGCAGATGGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSTQQKYRNLKPFMPVVPRSRP*AADGSH Trigger: GTGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGG...GACCACGGGCATAAATGGCTTCAAATTCCTGTACTTCTGCTGGGTTGAAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCGCACATCGTGGTCCTTaGCTTCTTTATGAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSLLGSCEVCSASGRPAHRGP*LLYEKR Trigger: CCTTTTCTCATAAAGAAGCCAAGGACCACGATGTGC...GGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000205753.2 ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| 3UTR CAA 72 bp | AGCCTGGAGGAGACTGCATTCCAGACCATGCAAAGCTaGATCACATACCTGAGACTTCAAAGCCCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLEETAFQTMQS*ITYLRLQSPPL Trigger: GAGAGGTGGGCTTTGAAGTCTCAGGTATGTGATCAAGCTTTGCATGGTCTGGAATGCAGTCTCCTCCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCTAAGACTGGCTTCAGGTaGGCACAGGCTGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRLYLCCSGLMSKSRMSKTGFR*AQAAIS Trigger: GGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTT...AGACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | GAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCTCTAAGACTGGCTTCAGGTaGGCACAGGCTGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQAVSLLLWFNVKEPHVSKTGFR*AQAAIS Trigger: GGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTT...AGAGACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCAGAGTTCCTTAAGAGTGGCACTCCCTATGGGTCAAGCATTCACACACGCACATCGTGGTCCTTaGCTTCTTTATGAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQSSLRVALPMGQAFTHAHRGP*LLYEKR Trigger: CCTTTTCTCATAAAGAAGCCAAGGACCACGATGTGC...GTGTGTGAATGCTTGACCCATAGGGAGTGCCACTCTTAAGGAACTCTGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| 3UTR CAA 72 bp | GTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTaGCTTCTTACAAGCAAGGGGCAAGTGATTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VARRISELAGRH*LLTSKGQVIPV Trigger: CACAGGAATCACTTGCCCCTTGCTTGTAAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCCCGCAAATGACAAAGCACCATaGAACATCCAGACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSLLGSCEVCSASGRPANDKAP*NIQTEL Trigger: AAGTTCTGTCTGGATGTTTCATGGTGCTTTGTCATT...TGCGGGCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTCCTCCCTGTGGAACTAAAGCTAACTTAAGGTCACCTAACAGTACAAATGGCCTGAATCATCTGTaGCTGCGTGTCCGGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPPCGTKANLRSPNSTNGLNHL*LRVRLE Trigger: CTCAAGCCGGACACGCAGCCACAGATGATTCAGGCC...ATTTGTACTGTTAGGTGACCTTAAGTTAGCTTTAGTTCCACAGGGAGGAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCAGAGTTCCTTAAGAGTGGCACTCCCTATGGGTCAAGCATTCACACACCATCAATTTCTATGGTaGACACACAATTCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQSSLRVALPMGQAFTHHQFLW*THNSAW Trigger: CCAAGCTGAATTGTGTGTTCACCATAGAAATTGATG...GTGTGTGAATGCTTGACCCATAGGGAGTGCCACTCTTAAGGAACTCTGGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTCACAGTCTTCTTGGCTCATGTGAGGTATGCTCTGCTTCAGGAAGGCAATGACAAAGCACCATaGAACATCCAGACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MALTVFLAHVRYALLQEGNDKAP*NIQTEL Trigger: AAGTTCTGTCTGGATGTTTCATGGTGCTTTGTCATT...GCCTTCCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGACTGTGAGAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGGCTGTATCTCTGTTGCTCTGGTTTAATGTCAAAGAGCCGCATGTCGCACATCGTGGTCCTTaGCTTCTTTATGAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEQAVSLLLWFNVKEPHVAHRGP*LLYEKR Trigger: CCTTTTCTCATAAAGAAGCCAAGGACCACGATGTGC...GACATGCGGCTCTTTGACATTAAACCAGAGCAACAGAGATACAGCCTGTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205899.2 ENSMUST00000206221.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCAACCCAGCAGAAGTACAGGAATTTGAAGCCATTTATGCCCGTGGTCTGGCAGAGAGGCCTTTaGATTTCTTCTTTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSTQQKYRNLKPFMPVVWQRGL*ISSLAL Trigger: CAAGGCCAAAGAAGAAATCCAAAGGCCTCTCTGCCA...GACCACGGGCATAAATGGCTTCAAATTCCTGTACTTCTGCTGGGTTGAAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTAATTCAGCTTGGGGATaGCTTTTAGGTGGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVTCVARRISELAGRHLLNSAWG*LLGGLL Trigger: GAGAAGACCACCTAAAAGTCATCCCCAAGCTGAATT...AAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCAACCCAGCAGAAGTACAGGAATTTGAAGCCATTTATGCCCGTGGTCGGGATGACTTTTAGGTaGTCTTCTCTGGTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLSTQQKYRNLKPFMPVVGMTFR*SSLVMI Trigger: GATCATCACCAGAGAAGACCACCTAAAAGTCATCCC...GACCACGGGCATAAATGGCTTCAAATTCCTGTACTTCTGCTGGGTTGAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| 3UTR CAA 72 bp | AGGTGGTCTTCTCTGGTGATGATCTTAAAGACATGTTaGGTCTCCTGCAGAAGGATTCCTGTAACTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RWSSLVMILKTC*VSCRRIPVTPT Trigger: TGTGGGAGTTACAGGAATCCTTCTGCAGGAGACCAAACATGTCTTTAAGATCATCACCAGAGAAGACCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206221.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACTCTTCTTGGCTCATGTaGGGTATGCTCTGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNSSWLM*GMLCFR Trigger: CCTGAAGCAGAGCATACCTCACATGAGCCAAGAAGA...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAAGGGGCAAGTGATTCCTGTGAACCAGGTTTCAACTACAAGGCTTTCGAAATAATAGCACCATaGAGATCTGCCTTTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKQGASDSCEPGFNYKAFEIIAP*RSAFRS Trigger: GCTCCTAAAGGCAGATCTTCATGGTGCTATTATTTC...GAAAGCCTTGTAGTTGAAACCTGGTTCACAGGAATCACTTGCCCCTTGCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAAGGGGCAAGTGATTCCTGTGAACCAGGTTTCAACTACAAGGCTTTCGTATCTCTGTTGCTCTaGTTTAATGTCAAAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YKQGASDSCEPGFNYKAFVSLLL*FNVKEP Trigger: CGGCTCTTTGACATTAAACCAGAGCAACAGAGATAC...GAAAGCCTTGTAGTTGAAACCTGGTTCACAGGAATCACTTGCCCCTTGCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTCCTCCCTGTGGAACTAAAGCTAACTTAAGGTCACCTAACAGTACAAATCTGCCTTTAGGAGCTTaGCCTGAATCATCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFPPCGTKANLRSPNSTNLPLGA*PESSVA Trigger: AGCCACAGATGATTCAGGCCAAGCTCCTAAAGGCAG...ATTTGTACTGTTAGGTGACCTTAAGTTAGCTTTAGTTCCACAGGGAGGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR TCA 90 bp | TCAACCCAGCAGAAGTACAGGAATTTGAAGCCATTTATGCCCGTGGTCTGGTTTCTTGGATTTCGTGACTaGAATAATAGCACCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STQQKYRNLKPFMPVVWFLGFRD*NNSTMK Trigger: CTTCATGGTGCTATTATTTCAGTCACGAAATCCAAG...AAACCAGACCACGGGCATAAATGGCTTCAAATTCCTGTACTTCTGCTGGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGCAAGGGGCAAGTGATTCCTGTGAACCAGGTTTCAACTACAAGGCTTTCAGGCTGTATCTCTGTTaGTCTGGTTTAATGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKQGASDSCEPGFNYKAFRLYLC*SGLMSK Trigger: CTTTGACATTAAACCAGAGCAACAGAGATACAGCCT...GAAAGCCTTGTAGTTGAAACCTGGTTCACAGGAATCACTTGCCCCTTGCTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR GCA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTACATGTTTGGTCTCCTaGAGAAGGATTCCTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTCVARRISELAGRHLLLTCLVS*RRIPVT Trigger: AGTTACAGGAATCCTTCTGCAGGAGACCAAACATGT...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACCCCGAAGCTGGAATTTaGTTCCATAAATGTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNPEAGI*FHKCRK Trigger: TTTCCTACATTTATGGAAGCAAATTCCAGCTTCGGG...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS CCA 90 bp | GCCCGCTGGCTTCCCAGCTCCAGGATACAGAAGCAAGAGCAAGACTaGCTTCAGGTGGGCACAGGCTGCCATTTCCTGCAGAGTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARWLPSSRIQKQEQD*LQVGTGCHFLQSGR Trigger: TCTCCCACTCTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTTGCTCTTGCTTCTGTATCCTGGAGCTGGGAAGCCAGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| CDS-3UTR CAA 90 bp | ATGATACCAGCCTGGAGTGCTGGCCCAGTTCCAATGGTACTGGCAGATCTGGCCTGGCAGACCGCTCACTaGCCCGAAGCTGGAATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MIPAWSAGPVPMVLADLAWQTAH*PEAGIC Trigger: GCAAATTCCAGCTTCGGGCAAGTGAGCGGTCTGCCA...GGCCAGATCTGCCAGTACCATTGGAACTGGGCCAGCACTCCAGGCTGGTATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
||
| CDS TCA 90 bp | TGGCTTCAGGTGGGCACAGGCTGCCATTTCCTGCAGAGTGGGAGATaGCGGGAAATCAAGGAGTCCAAGTCCCTCAGAGCTGACTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLQVGTGCHFLQSGR*REIKESKSLRADSG Trigger: ACCAGAGTCAGCTCTGAGGGACTTGGACTCCTTGATTTCCCGTCATCTCCCACTCTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| CDS GCA 90 bp | AGCAAGAGCAAGACTGGCTTCAGGTGGGCACAGGCTGCCATTTCCTaGAGAGTGGGAGATGACGGGAAATCAAGGAGTCCAAGTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKSKTGFRWAQAAIS*RVGDDGKSRSPSPS Trigger: TGAGGGACTTGGACTCCTTGATTTCCCGTCATCTCCCACTCTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTTGCTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
||
| CDS-3UTR CAA 90 bp | CACCTCTCCAGTGTCACATCTCCTCCAACAAGGCCAGAGTTCCTTAAGAGTGGCTCCAAGATCACGGCCTaGCGCTGCAGATGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSSVTSPPTRPEFLKSGSKITA*RCRWLS Trigger: TGAGAGCCATCTGCAGCGCAAGGCCGTGATCTTGGA...GCCACTCTTAAGGAACTCTGGCCTTGTTGGAGGAGATGTGACACTGGAGAGGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | GTGGTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTGGCTGCGTGTCCGGCTaGAGCCCATTGCACAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVTCVARRISELAGRHLLGCVSG*SPLHRS Trigger: GGACCTGTGCAATGGGCTCAAGCCGGACACGCAGCC...AAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | TACAAGCAAGGGGCAAGTGATTCCTGTGAACCAGGTTTCAACTACAAGGCTTTCTCCGGCTTGAGCCCATaGCACAGGTCCCGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: YKQGASDSCEPGFNYKAFSGLSP*HRSRMY Trigger: GTACATCCGGGACCTGTGCAATGGGCTCAAGCCGGA...GAAAGCCTTGTAGTTGAAACCTGGTTCACAGGAATCACTTGCCCCTTGCTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | CACCTCTCCAGTGTCACATCTCCTCCAACAAGGCCAGAGTTCCTTAAGAGTGGCATTGATCCCTTTGCTTaGAACTTCTTGGCAGACCGC | + |
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Preference number: 5 (lower is better) Translates to: HLSSVTSPPTRPEFLKSGIDPFA*NFLADR Trigger: GCGGTCTGCCAAGAAGTTCAAAGCAAAGGGATCAAT...GCCACTCTTAAGGAACTCTGGCCTTGTTGGAGGAGATGTGACACTGGAGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS GCA 90 bp | AGGATACAGAAGCAAGAGCAAGACTGGCTTCAGGTGGGCACAGGCTaGCATTTCCTGCACATCGTGGTCCTTGGCTTCTTTATGAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RIQKQEQDWLQVGTG*HFLHIVVLGFFMRK Trigger: TTTTCTCATAAAGAAGCCAAGGACCACGATGTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTTGCTCTTGCTTCTGTATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
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| CDS-3UTR CAA 90 bp | CATGCAAAGCTTGATCACATACCTGAGACTTCAAAGCCCACCTCTCCAGTGTCAATTTCTTCTTTGGCCTaGGCCTTGGCTTTAGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: HAKLDHIPETSKPTSPVSISSLA*ALALGE Trigger: CTCGCCTAAAGCCAAGGCCAAGGCCAAAGAAGAAAT...TGACACTGGAGAGGTGGGCTTTGAAGTCTCAGGTATGTGATCAAGCTTTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGCCTGGAGGAGACTGCATTCCAGACCATGCAAAGCTTGATCACATACCTAACACACAATTCAGCTaGGGGATGACTTTTAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RQPGGDCIPDHAKLDHIPNTQFS*GMTFRW Trigger: CCACCTAAAAGTCATCCCCAAGCTGAATTGTGTGTT...AGGTATGTGATCAAGCTTTGCATGGTCTGGAATGCAGTCTCCTCCAGGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTTTTGCTTTGAACTTCTaGGCAGACCGCTCACTTGCC | + |
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Preference number: 5 (lower is better) Translates to: VTCVARRISELAGRHLLLFALNF*ADRSLA Trigger: GGCAAGTGAGCGGTCTGCCAAGAAGTTCAAAGCAAA...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | GTCTTTCCTCCCTGTGGAACTAAAGCTAACTTAAGGTCACCTAACAGTACAAATGCTCTCACAGTCTTCTaGGCTCATGTGAGGTATGCT | + |
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Preference number: 5 (lower is better) Translates to: VFPPCGTKANLRSPNSTNALTVF*AHVRYA Trigger: AGCATACCTCACATGAGCCAAGAAGACTGTGAGAGC...ATTTGTACTGTTAGGTGACCTTAAGTTAGCTTTAGTTCCACAGGGAGGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | GAGTTTCAGAGGTTTAGTCTGTTATCATTGTGGGAAGCACAGCACCATTTAAACTTGGCAGAGAGGCCTTaGGATTTCTTCTTTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: EFQRFSLLSLWEAQHHLNLAERP*DFFFGL Trigger: AAGGCCAAAGAAGAAATCCAAAGGCCTCTCTGCCAA...GTTTAAATGGTGCTGTGCTTCCCACAATGATAACAGACTAAACCTCTGAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS-3UTR CAA 90 bp | GTTACATGTGTTGCCAGGAGAATTTCTGAGTTGGCTGGCAGACATTTGCTTCTTCAGGCTGTATCTCTGTaGCTCTGGTTTAATGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VTCVARRISELAGRHLLLQAVSL*LWFNVK Trigger: TTTGACATTAAACCAGAGCAACAGAGATACAGCCTG...AAGAAGCAAATGTCTGCCAGCCAACTCAGAAATTCTCCTGGCAACACATGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS CCA 72 bp | CCAGGATACAGAAGCAAGAGCAAGACTGGCTTCAGGTaGGCACAGGCTGCCATTTCCTGCACATCGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGYRSKSKTGFR*AQAAISCTSWS Trigger: GGACCACGATGTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTTGCTCTTGCTTCTGTATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205753.2 ENSMUST00000206221.2 |
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| CDS TCA 72 bp | ATGACGGGAAATCAAGGAGTCCAAGTCCCTCAGAGCTaGCTCTGGTGCCCTGCACATCGTGGTCCTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: MTGNQGVQVPQS*LWCPAHRGPWL Trigger: AAGCCAAGGACCACGATGTGCAGGGCACCAGAGTCAGCTCTGAGGGACTTGGACTCCTTGATTTCCCGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
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| CDS GCA 72 bp | AAGACTGGCTTCAGGTGGGCACAGGCTGCCATTTCCTaGAGAGTGGGAGATGACGGGAAATCAAGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KTGFRWAQAAIS*RVGDDGKSRSP Trigger: TGGACTCCTTGATTTCCCGTCATCTCCCACTCTGCAGGAAATGGCAGCCTGTGCCCACCTGAAGCCAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205899.2 |
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| CDS GCA 72 bp | TCCCTTTGCTTTGAACTTCTTGGCAGACCGCTCACTTaGCCGAAGCTGGAATTTGCTTCCATAAATGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLCFELLGRPLT*PKLEFASINVG Trigger: TCCTACATTTATGGAAGCAAATTCCAGCTTCGGGCAAGTGAGCGGTCTGCCAAGAAGTTCAAAGCAAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS CCA 72 bp | GTGAACACACAATTCAGCTTGGGGATGACTTTTAGGTaGTCTTCTCTGGTGATGATCTTAAAGACATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VNTQFSLGMTFR*SSLVMILKTCL Trigger: CAAACATGTCTTTAAGATCATCACCAGAGAAGACCACCTAAAAGTCATCCCCAAGCTGAATTGTGTGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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| CDS CAA 72 bp | AAGTCATCAATTTCTATGGTGAACACACAATTCAGCTaGGGGATGACTTTTAGGTGGTCTTCTCTGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: KSSISMVNTQFS*GMTFRWSSLVM Trigger: CATCACCAGAGAAGACCACCTAAAAGTCATCCCCAAGCTGAATTGTGTGTTCACCATAGAAATTGATGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032585.8 |
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