Pregenerated sensors for POP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022325Ensembl transcript IDs: ENSMUST00000052290.14, ENSMUST00000079028.6
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTTCCTGCCCAGCTATaGGCGGCCCTGCGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARLPAQL*AALRPG Trigger: GCCAGGCCGCAGGGCCGCCCATAGCTGGGCAGGAAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGCTATGGGCGGCCCTaGGGCCTGGCCCTCGGAGGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSYGRP*GLALGG Trigger: GCCTCCGAGGGCCAGGCCGCAGGGCCGCCCATAGCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGGCGGCCCTGCGGCCTaGCCCTCGGAGGCTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGGGPAA*PSEALC Trigger: ACACAGAGCCTCCGAGGGCCAGGCCGCAGGGCCGCC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGGCTCGGTGGCTCTTaGCCGTGGGCCTCTCCCCAA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARRLGGS*PWASPQ Trigger: TTGGGGAGAGGCCCACGGCCAAGAGCCACCGAGCCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTTCCTGCCCAGCTATaGGCGGCCCTGCGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLPAQL*AALRPG Trigger: GCCAGGCCGCAGGGCCGCCCATAGCTGGGCAGGAAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCCAGCCCTTGGGAATaGGGACATCCCAGCCACTGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARPSPWE*GHPSHC Trigger: GCAGTGGCTGGGATGTCCTCATTCCCAAGGGCTGGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCTGACCACAGCCCCTaGGTCAGAGCTTCCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARPDHSP*VRASCP Trigger: TGGGCAGGAAGCTCTGACGCAGGGGCTGTGGTCAGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTCCCCTCCTGCGCTTaGCAGCCTGTAACTTCTGGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARVPSCA*QPVTSG Trigger: GCCAGAAGTTACAGGCTGTCAAGCGCAGGAGGGGAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGGCTCGGTGGCTCTTaGCCGTGGGCCTCTCCCCAA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGRLGGS*PWASPQ Trigger: TTGGGGAGAGGCCCACGGCCAAGAGCCACCGAGCCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGACAGAGGCTTCCAATaGGCACAAGACCAGCTGCCG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARDRGFQ*AQDQLP Trigger: CGGCAGCTGGTCTTGTGCTCATTGGAAGCCTCTGTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCCAGCCCTTGGGAATaGGGACATCCCAGCCACTGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPSPWE*GHPSHC Trigger: GCAGTGGCTGGGATGTCCTCATTCCCAAGGGCTGGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAAACCGATACTGCAGTaGGGTTGGAGGCCGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARKPILQ*GWRPQQ Trigger: CTGCTGCGGCCTCCAACCTCACTGCAGTATCGGTTT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGCATGAGGCTCCCTTaGCGCTTCCCAGACAAGCAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSMRLP*RFPDKQ Trigger: CTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGAGCACAAGACCAGCTaGCGGTGCACATCCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETAREHKTS*RCTSLP Trigger: AGGAAGGGATGTGCACCGGCAGCTGGTCTTGTGCTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGAAGCTGTGTGCACATaGCACAGGCACACCCTCCAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETAREAVCT*HRHTLQ Trigger: CTGGAGGGTGTGCCTGTGGCATGTGCACACAGCTTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCTGACCACAGCCCCTaGGTCAGAGCTTCCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPDHSP*VRASCP Trigger: TGGGCAGGAAGCTCTGACGCAGGGGCTGTGGTCAGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGCACCAGGCCCCTCATaGCTGCTGACTGGCTGGACA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGAPGPS*LLTGWT Trigger: TGTCCAGCCAGTCAGCAGCCATGAGGGGCCTGGTGC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTTGGGTCAGTCTCCTaGGCACCAGGCATTGAAGCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARLGSVS*APGIEA Trigger: AGCTTCAATGCCTGGTGCTCAGGAGACTGACCCAAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTCCCCTCCTGCGCTTaGCAGCCTGTAACTTCTGGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVPSCA*QPVTSG Trigger: GCCAGAAGTTACAGGCTGTCAAGCGCAGGAGGGGAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGGATCTCCTGAGAAGTaGCCTCAGGACCTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARGSPEK*PQDLLS Trigger: GGAAAGCAGGTCCTGAGGGCACTTCTCAGGAGATCC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGGCAGAGGTTTGTCATaGCTCGATAGCAGGCTCGGT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARGRGLS*LDSRLG Trigger: ACCGAGCCTGCTATCGAGCCATGACAAACCTCTGCC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTCCAGCACGGCAGTCTaGGAAATCGCCTGGGATGTT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSSTAV*EIAWDV Trigger: AACATCCCAGGCGATTTCCCAGACTGCCGTGCTGGA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGATTCCATGGCCACTTTaGTCCCCTCCTGCGCTTGAC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARIPWPL*SPPALD Trigger: GTCAAGCGCAGGAGGGGACCAAAGTGGCCATGGAAT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCATGGTGTGAGGCTCTaGGCTGCCCTTCCTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGHGVRL*AALPEQ Trigger: CTGCTCAGGAAGGGCAGCCCAGAGCCTCACACCATG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGATGGGTCGCTGTGTCTaGATTCCCAGGGTCCATGGT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARMGRCV*IPRVHG Trigger: ACCATGGACCCTGGGAATCCAGACACAGCGACCCAT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGCCTAGGAGGAGCCTaGAGCAGTGTGAGGTTAGTC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSLGGA*SSVRLV Trigger: GACTAACCTCACACTGCTCCAGGCTCCTCCTAGGCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGTGGGGACTCATCTTaGTTTGCCACTGCCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSGDSS*FATALR Trigger: CCTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGCAGCCCTCAGTGCTaGGGTCAGGATACAGTGCGA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSSPQC*GQDTVR Trigger: TCGCACTGTATCCTGACCTCAGCACTGAGGGCTGCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTATCCTGGTCCCAGATaGAGCTGTGTGCACATGCCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARYPGPR*SCVHMP Trigger: TGGCATGTGCACACAGCTTCATCTGGGACCAGGATA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTAGTCAGTTCTTGCTaGGCTCTGCAGGGAGCCCTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLVSSC*ALQGAL Trigger: GAGGGCTCCCTGCAGAGCTCAGCAAGAACTGACTAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACACAGATCATGGTGTaGGGCTCTGGGCTGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTQIMV*GSGLPF Trigger: GAAGGGCAGCCCAGAGCCTCACACCATGATCTGTGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAACCGATACTGCAGTaGGGTTGGAGGCCGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKPILQ*GWRPQQ Trigger: CTGCTGCGGCCTCCAACCTCACTGCAGTATCGGTTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGTGCCCTCAGGACCTaGTTTCCAGCCTCCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSALRT*FPASLF Trigger: AAAAAGGGAGGCTGGAAAGCAGGTCCTGAGGGCACT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGACCATCAGAGCTCCTaGAAGTGTCAGTCCACCAGT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARDHQSS*KCQSTS Trigger: ACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAGACCAGCTGCCGGTaGACATCCCTTCCTCACAGG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKTSCR*TSLPHR Trigger: CCTGTGAGGAAGGGATGTGCACCGGCAGCTGGTCTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCCTCCAGAAGCAGCTaGTTCACTCGCTCATTAGCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARPSRSS*FTRSLA Trigger: AGCTAATGAGCGAGTGAAGCAGCTGCTTCTGGAGGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGAAGCTGTGTGCACATaGCACAGGCACACCCTCCAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGEAVCT*HRHTLQ Trigger: CTGGAGGGTGTGCCTGTGGCATGTGCACACAGCTTC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGGCTGGTGTCAGGAGTaGGTCAGGCATGCAGATATT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARGWCQE*VRHADI Trigger: AATATCTGCATGCCTGACCCACTCCTGACACCAGCC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTTGGGCATGAACCCTaGACTCCCAGTCCCGAGTCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLGHEP*TPSPES Trigger: TGACTCGGGACTGGGAGTCCAGGGTTCATGCCCAAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTCTGGCTTCCTGGGTTaGTTTTCAGCTATGCCTGCC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSGFLG*FSAMPA Trigger: GGCAGGCATAGCTGAAAACCAACCCAGGAAGCCAGA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTGGCATTCCATTCCATaGCCACTTTGGTCCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARWHSIP*PLWSPP Trigger: AGGAGGGGACCAAAGTGGCCATGGAATGGAATGCCA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGATTTGCCACTGCCTTaGGGTTCCAGAATGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARDLPLP*GSRMKL Trigger: GAGCTTCATTCTGGAACCTCAAGGCAGTGGCAAATC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTACTTGGGGATCTCCTaGGAAGTGCCCTCAGGACCT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGYLGIS*EVPSGP Trigger: AGGTCCTGAGGGCACTTCTCAGGAGATCCCCAAGTA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTCAGCGGCTCGTGCTTaGGCAAAAGTAGAAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSAARA*AKVEAV Trigger: AACTGCTTCTACTTTTGCTCAAGCACGAGCCGCTGA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCACTTCTTCACCATATaGAACCGTTTGGCGTGCCAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARHFFTI*NRLACQ Trigger: CTGGCACGCCAAACGGTTTCATATGGTGAAGAAGTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCCCAGACAAGCAGTaGACTGCAGCAAAAGTCAGG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARFPDKQ*TAAKVR Trigger: CCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAAAAATCTCCCTGTGTaGCAAAGCCTAGGAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARKNLPV*QSLGGA Trigger: GGCTCCTCCTAGGCTTTGTCACACAGGGAGATTTTT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGGATCTCCTGAGAAGTaGCCTCAGGACCTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGGSPEK*PQDLLS Trigger: GGAAAGCAGGTCCTGAGGGCACTTCTCAGGAGATCC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGACAAGCAGTGAACTaGAGCAAAAGTCAGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARRQAVN*SKSQAC Trigger: GCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGGCAGAGGTTTGTCATaGCTCGATAGCAGGCTCGGT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGGRGLS*LDSRLG Trigger: ACCGAGCCTGCTATCGAGCCATGACAAACCTCTGCC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCCCAAGCATTTCCCTaGGATACTTATTTGCCCGGT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARAQAFP*DTYLPG Trigger: ACCGGGCAAATAAGTATCCCAGGGAAATGCTTGGGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTCAGAAGCATCCTCTaGGGTCATCCTAGACTTCCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARLRSIL*GHPRLP Trigger: TGGAAGTCTAGGATGACCCCAGAGGATGCTTCTGAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTCCAGCACGGCAGTCTaGGAAATCGCCTGGGATGTT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSSTAV*EIAWDV Trigger: AACATCCCAGGCGATTTCCCAGACTGCCGTGCTGGA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTTGGCAGATCTCTTTaGGGACACAAGGCACTCCAA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARVGRSL*GHKALQ Trigger: TTGGAGTGCCTTGTGTCCCCAAAGAGATCTGCCAAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCATTCCATGGCCACTTTaGTCCCCTCCTGCGCTTGAC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGIPWPL*SPPALD Trigger: GTCAAGCGCAGGAGGGGACCAAAGTGGCCATGGAAT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCCACACCAGGGCTCTaGGGAAGTCATTCAGAATGG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPTPGL*GSHSEW Trigger: CCATTCTGAATGACTTCCCCAGAGCCCTGGTGTGGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCAGGTCCTCCTTAGATaGGACACAGATCATGGTGTG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARQVLLR*DTDHGV Trigger: CACACCATGATCTGTGTCCCATCTAAGGAGGACCTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGCCTAGGAGGAGCCTaGAGCAGTGTGAGGTTAGTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSLGGA*SSVRLV Trigger: GACTAACCTCACACTGCTCCAGGCTCCTCCTAGGCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTGGCGTGCCAGATGTaGGTCTCTAACCATATGTTC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARLACQM*VSNHMF Trigger: GAACATATGGTTAGAGACTCACATCTGGCACGCCAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCTTCTTGTCTTTGGTaGAGAGAACGACCATCAGAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARASCLW*RERPSE Trigger: CTCTGATGGTCGTTCTCTTCACCAAAGACAAGAAGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTATCCTGGTCCCAGATaGAGCTGTGTGCACATGCCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGYPGPR*SCVHMP Trigger: TGGCATGTGCACACAGCTTCATCTGGGACCAGGATA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGATTTCAGCGGCTCGTaGTTGAGCAAAAGTAGAAGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARDFSGS*LSKSRS Trigger: GCTTCTACTTTTGCTCAAGCACGAGCCGCTGAAATC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCTGGGATACTTATTTaGCCGGTAAAGCATGAGGCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARPGILI*PVKHEA Trigger: AGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGAGGTCAGGATACAGTaGGAAAGAGGGCCTATCAGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGEVRIQ*ERGPIS Trigger: GCTGATAGGCCCTCTTTCGCACTGTATCCTGACCTC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGACCATCAGAGCTCCTaGAAGTGTCAGTCCACCAGT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGDHQSS*KCQSTS Trigger: ACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCACCAGGACGAGAGCTaGTTCAGCAGTTTCCTACTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGHQDES*FSSFLL Trigger: GAGTAGGAAACTGCTGAAGCAGCTCTCGTCCTGGTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGACTCAGGAAGCAAGTaGGGACTCATCTTGATTTGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARDSGSK*GLILIC Trigger: GCAAATCAAGATGAGTCCCCACTTGCTTCCTGAGTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGGCGTTTGACATTGTaGCTCATGGCTCTACGTCGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGRRLTL*LMALRR Trigger: GCGACGTAGAGCCATGAGCCACAATGTCAAACGCCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCATATGAAACCGTTTaGCGTGCCAGATGTGAGTCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARPYETV*RARCES Trigger: AGACTCACATCTGGCACGCCAAACGGTTTCATATGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGCCAGTTTAAGAGTTaGGTGAAGCCAGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSQFKS*VKPDPQ Trigger: CTGTGGATCTGGCTTCACCCAACTCTTAAACTGGCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGGCTGGTGTCAGGAGTaGGTCAGGCATGCAGATATT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGGWCQE*VRHADI Trigger: AATATCTGCATGCCTGACCCACTCCTGACACCAGCC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCTGGATCATCTGTATaGTCAGACAGAGGCTTCCAA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARAGSSV*SDRGFQ Trigger: TTGGAAGCCTCTGTCTGACCATACAGATGATCCAGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTCCTACAGATATCCTaGTCCCAGATGAAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARLLQIS*SQMKLC Trigger: ACACAGCTTCATCTGGGACCAGGATATCTGTAGGAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTCTGGCTTCCTGGGTTaGTTTTCAGCTATGCCTGCC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSGFLG*FSAMPA Trigger: GGCAGGCATAGCTGAAAACCAACCCAGGAAGCCAGA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTGGCATTCCATTCCATaGCCACTTTGGTCCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGWHSIP*PLWSPP Trigger: AGGAGGGGACCAAAGTGGCCATGGAATGGAATGCCA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTCATGGCTGCTGACTaGCTGGACAACATTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLMAAD*LDNISS Trigger: GCTGGAAATGTTGTCCAGCCAGTCAGCAGCCATGAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGATTTGCCACTGCCTTaGGGTTCCAGAATGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGDLPLP*GSRMKL Trigger: GAGCTTCATTCTGGAACCTCAAGGCAGTGGCAAATC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCCCAGACAAGCAGTaGACTGCAGCAAAAGTCAGG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFPDKQ*TAAKVR Trigger: CCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGTTTAAGAGTTGGGTaGAGCCAGATCCACAGCTGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSLRVG*SQIHSC Trigger: GCAGCTGTGGATCTGGCTTCACCCAACTCTTAAACT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAAAATCTCCCTGTGTaGCAAAGCCTAGGAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKNLPV*QSLGGA Trigger: GGCTCCTCCTAGGCTTTGTCACACAGGGAGATTTTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGACAAGCAGTGAACTaGAGCAAAAGTCAGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGRQAVN*SKSQAC Trigger: GCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACGTCGCATGTGCCTTaGAAGAGTCTGGAAAACCAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTSHVP*KSLENQ Trigger: CTGGTTTTCCAGACTCTTCCAAGGCACATGCGACGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTCAGAAGCATCCTCTaGGGTCATCCTAGACTTCCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLRSIL*GHPRLP Trigger: TGGAAGTCTAGGATGACCCCAGAGGATGCTTCTGAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCACTCGCTCATTAGCTaGATCATCTGTATGGTCAGA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARHSLIS*IICMVR Trigger: TCTGACCATACAGATGATCCAGCTAATGAGCGAGTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCCAGTCACTTTTCCTaGCTGCTGAATCAGAAGTAT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARASHFS*LLNQKY Trigger: ATACTTCTGATTCAGCAGCCAGGAAAAGTGACTGGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTTGGCAGATCTCTTTaGGGACACAAGGCACTCCAA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVGRSL*GHKALQ Trigger: TTGGAGTGCCTTGTGTCCCCAAAGAGATCTGCCAAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCGAACAACACAGAGCTaGCTACCTGTGGTAGCCATA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGRTTQS*LPVVAI Trigger: TATGGCTACCACAGGTAGCCAGCTCTGTGTTGTTCG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCAGGTCCTCCTTAGATaGGACACAGATCATGGTGTG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGQVLLR*DTDHGV Trigger: CACACCATGATCTGTGTCCCATCTAAGGAGGACCTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGCTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARSLVSF*IRQSSG Trigger: TCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCCCCTTTCCAAAATaGTGCTTTCCATCTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARFPFPK*CFPSLS Trigger: TGAGAGAGATGGAAAGCATCATTTTGGAAAGGGGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTTTTAACATGGCACTaGTTTCAGCGGCTCGTGCTT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLLTWH*FQRLVL Trigger: AAGCACGAGCCGCTGAAATCAGTGCCATGTTAAAAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTGGCGTGCCAGATGTaGGTCTCTAACCATATGTTC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLACQM*VSNHMF Trigger: GAACATATGGTTAGAGACTCACATCTGGCACGCCAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTAGTTCTTCCTCTTTaGCTTTCAACTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARVVLPL*LSTPNS Trigger: GCTGTTTGGAGTTGAAAGGCAAAGAGGAAGAACTAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCTGGGATACTTATTTaGCCGGTAAAGCATGAGGCT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPGILI*PVKHEA Trigger: AGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTCACGTTACTGGGCTaGTTTCTCATTTTCTTAGCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARVTLLG*FLIFLA Trigger: TGCTAAGAAAATGAGAAACCAGCCCAGTAACGTGAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGACAGAGTCACGTTACTaGGCTGGTTTCTCATTTTCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARTESRY*AGFSFS Trigger: AGAAAATGAGAAACCAGCCCAGTAACGTGACTCTGT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAAGCAGTTATATACTTaGGGATCTCCTGAGAAGTGC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARKQLYT*GSPEKC Trigger: GCACTTCTCAGGAGATCCCCAAGTATATAACTGCTT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTGCCTTGGAAGAGTCTaGAAAACCAGTGAGTTAGAT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARCLGRV*KTSELD Trigger: ATCTAACTCACTGGTTTTCCAGACTCTTCCAAGGCA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCATATGAAACCGTTTaGCGTGCCAGATGTGAGTCT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPYETV*RARCES Trigger: AGACTCACATCTGGCACGCCAAACGGTTTCATATGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAGCCAGTTTAAGAGTTaGGTGAAGCCAGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSQFKS*VKPDPQ Trigger: CTGTGGATCTGGCTTCACCCAACTCTTAAACTGGCT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGACCTCGGTAGATAAATaGAATCCAAAAAGCCATGCC | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARTSVDK*NPKSHA Trigger: GGCATGGCTTTTTGGATTCCATTTATCTACCGAGGT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGATCCGGTTTAAATCCTaGTCCAAGAGTTTATTCTCG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARIRFKS*SKSLFS Trigger: CGAGAATAAACTCTTGGATCAGGATTTAAACCGGAT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACTTTTCCTGGCTGCTaGATCAGAAGTATGGGTATC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTFPGC*IRSMGI Trigger: GATACCCATACTTCTGATTCAGCAGCCAGGAAAAGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGAAGATCCTTAGCTTaGTCTTCAGCAAACAGAACT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARRRSLA*SSANRT Trigger: AGTTCTGTTTGCTGAAGATCAAGCTAAGGATCTTCT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTTTTGGAGGAAGATTaGTCATTCACATCAGACTCA | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARVLEED*SFTSDS Trigger: TGAGTCTGATGTGAATGAGCAATCTTCCTCCAAAAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCAACAACTCAAACACTaGTTCTTGTCTTTGGTGAAG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARQQLKH*FLSLVK Trigger: CTTCACCAAAGACAAGAAGCAGTGTTTGAGTTGTTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGAGTTAGATGACTTCTaGGTCACAGCTTTTAACATG | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARELDDF*VTAFNM Trigger: CATGTTAAAAGCTGTGACCCAGAAGTCATCTAACTC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACTCGCTCATTAGCTTaGTATCTTTCTGGATCAGGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTRSLA*YLSGSG Trigger: GCCTGATCCAGAAAGATACCAAGCTAATGAGCGAGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCCCCTTTCCAAAATaGTGCTTTCCATCTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFPFPK*CFPSLS Trigger: TGAGAGAGATGGAAAGCATCATTTTGGAAAGGGGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTAGTTCTTCCTCTTTaGCTTTCAACTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVVLPL*LSTPNS Trigger: GCTGTTTGGAGTTGAAAGGCAAAGAGGAAGAACTAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTCACGTTACTGGGCTaGTTTCTCATTTTCTTAGCA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVTLLG*FLIFLA Trigger: TGCTAAGAAAATGAGAAACCAGCCCAGTAACGTGAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACAGAGTCACGTTACTaGGCTGGTTTCTCATTTTCT | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTESRY*AGFSFS Trigger: AGAAAATGAGAAACCAGCCCAGTAACGTGACTCTGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAGCAGTTATATACTTaGGGATCTCCTGAGAAGTGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKQLYT*GSPEKC Trigger: GCACTTCTCAGGAGATCCCCAAGTATATAACTGCTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGACGGGTTCTGAACAGTaGCATGTTGTTTTTATTTCT | + |
Preference number: 4 (lower is better) Translates to: FHAVPQYILNQMVTETARTGSEQ*HVVFIS Trigger: AGAAATAAAAACAACATGCCACTGTTCAGAACCCGT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAACTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGA | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGNLVSF*IRQSSG Trigger: TCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCACCTCGGTAGATAAATaGAATCCAAAAAGCCATGCC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGTSVDK*NPKSHA Trigger: GGCATGGCTTTTTGGATTCCATTTATCTACCGAGGT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCATCCGGTTTAAATCCTaGTCCAAGAGTTTATTCTCG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGIRFKS*SKSLFS Trigger: CGAGAATAAACTCTTGGATCAGGATTTAAACCGGAT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCAACAACTCAAACACTaGTTCTTGTCTTTGGTGAAG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGQQLKH*FLSLVK Trigger: CTTCACCAAAGACAAGAAGCAGTGTTTGAGTTGTTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGAGTTAGATGACTTCTaGGTCACAGCTTTTAACATG | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGELDDF*VTAFNM Trigger: CATGTTAAAAGCTGTGACCCAGAAGTCATCTAACTC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTAAATTCCGAAACTTaGTATCTTTCTGGATCAGGC | + |
Preference number: 4 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVNSET*YLSGSG Trigger: GCCTGATCCAGAAAGATACCAAGTTTCGGAATTTAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS GCA 90 bp | GAGCAGTGTGAGGTTAGTCCTGGAAGGGGGCCTGACCACAGCCCCTaGGTCAGAGCTTCCTGCCCAGCTATGGGCGGCCCTGCGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: EQCEVSPGRGPDHSP*VRASCPAMGGPAAW Trigger: CCAGGCCGCAGGGCCGCCCATAGCTGGGCAGGAAGCTCTGACGCAGGGGCTGTGGTCAGGCCCCCTTCCAGGACTAACCTCACACTGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | GTGCAGGTCCTCCTTAGATGGGACACAGATCATGGTGTGAGGCTCTaGGCTGCCCTTCCTGAGCAGGGACAAGCTGACCCACACCAGGGC | + |
Preference number: 5 (lower is better) Translates to: VQVLLRWDTDHGVRL*AALPEQGQADPHQG Trigger: GCCCTGGTGTGGGTCAGCTTGTCCCTGCTCAGGAAGGGCAGCCCAGAGCCTCACACCATGATCTGTGTCCCATCTAAGGAGGACCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | GATACTGCAGTGAGGTTGGAGGCCGCAGCAGCACCAGGCCCCTCATaGCTGCTGACTGGCTGGACAACATTTCCAGCAAGCCGGTCATAC | + |
Preference number: 5 (lower is better) Translates to: DTAVRLEAAAAPGPS*LLTGWTTFPASRSY Trigger: GTATGACCGGCTTGCTGGAAATGTTGTCCAGCCAGTCAGCAGCCATGAGGGGCCTGGTGCTGCTGCGGCCTCCAACCTCACTGCAGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | GGAGCCCTCCTGATCTCAGAACTGGGCCCACACCAGGACGAGAGCTaGTTCAGCAGTTTCCTACTCCGAACAACACAGAGCTGGCTACCT | + |
Preference number: 5 (lower is better) Translates to: GALLISELGPHQDES*FSSFLLRTTQSWLP Trigger: AGGTAGCCAGCTCTGTGTTGTTCGGAGTAGGAAACTGCTGAAGCAGCTCTCGTCCTGGTGTGGGCCCAGTTCTGAGATCAGGAGGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | AGAACGACCATCAGAGCTCCTGCAAGTGTCAGTCCACCAGTGATGTaGTGTCTCCTCGGCATCCTCTTCCCCTGTGTGTACAGGAGCAGC | + |
Preference number: 5 (lower is better) Translates to: RTTIRAPASVSPPVM*CLLGILFPCVYRSS Trigger: GCTGCTCCTGTACACACAGGGGAAGAGGATGCCGAGGAGACACCACATCACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | CCAGCCACTGCCCCAGCCCAGTCGGTCTTCGCCAGTCACTTTTCCTaGCTGCTGAATCAGAAGTATGGGTATCTTAGATTCACGAGCCCC | + |
Preference number: 5 (lower is better) Translates to: PATAPAQSVFASHFS*LLNQKYGYLRFTSP Trigger: GGGGCTCGTGAATCTAAGATACCCATACTTCTGATTCAGCAGCCAGGAAAAGTGACTGGCGAAGACCGACTGGGCTGGGGCAGTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | CCGGCCCAAGCATTTCCCTGGGATACTTATTTGCCCGGTAAAGCATaGGGCTCCCTTGCCGCTTCCCAGACAAGCAGTGAACTGCAGCAA | + |
Preference number: 5 (lower is better) Translates to: PAQAFPWDTYLPGKA*GSLAASQTSSELQQ Trigger: TTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGGGAAATGCTTGGGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCAGGCTCGGTGGCTCTaGGCCGTGGGCCTCTCCCCA | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARQARWL*AVGLSP Trigger: TGGGGAGAGGCCCACGGCCAAGAGCCACCGAGCCTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | CCAGATGAAGGTAACCGGCCCAAGCATTTCCCTGGGATACTTATTTaGCCGGTAAAGCATGAGGCTCCCTTGCCGCTTCCCAGACAAGCA | + |
Preference number: 5 (lower is better) Translates to: PDEGNRPKHFPGILI*PVKHEAPLPLPRQA Trigger: TGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGGGAAATGCTTGGGCCGGTTACCTTCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | CAGCTGCCGGTGCACATCCCTTCCTCACAGGTAAATTCCGAAACTTaGTATCTTTCTGGATCAGGCAAAGCTCTGGATCGCTGTGGGGGC | + |
Preference number: 5 (lower is better) Translates to: QLPVHIPSSQVNSET*YLSGSGKALDRCGG Trigger: GCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGGAATTTACCTGTGAGGAAGGGATGTGCACCGGCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS TCA 90 bp | CATTGTCAAGTCACTGACTATAATCCCTGTAGTGGGAGATCGCCATaGCCGAGGCTGGCAGGCATCTCGTGTCCCGTCACCAATGGTCTT | + |
Preference number: 5 (lower is better) Translates to: HCQVTDYNPCSGRSP*PRLAGISCPVTNGL Trigger: AAGACCATTGGTGACGGGACACGAGATGCCTGCCAGCCTCGGTCATGGCGATCTCCCACTACAGGGATTATAGTCAGTGACTTGACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | CGCTCATTAGCTGGATCATCTGTATGGTCAGACAGAGGCTTCCAATaGGCACAAGACCAGCTGCCGGTGCACATCCCTTCCTCACAGGTA | + |
Preference number: 5 (lower is better) Translates to: RSLAGSSVWSDRGFQ*AQDQLPVHIPSSQV Trigger: TACCTGTGAGGAAGGGATGTGCACCGGCAGCTGGTCTTGTGCTCATTGGAAGCCTCTGTCTGACCATACAGATGATCCAGCTAATGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS TCA 90 bp | TCACTGGCATTCCATTCCATGGCCACTTTGGTCCCCTCCTGCGCTTaGCAGCCTGTAACTTCTGGCTTCCTGGGTTGGTTTTCAGCTATG | + |
Preference number: 5 (lower is better) Translates to: SLAFHSMATLVPSCA*QPVTSGFLGWFSAM Trigger: CATAGCTGAAAACCAACCCAGGAAGCCAGAAGTTACAGGCTGTCAAGCGCAGGAGGGGACCAAAGTGGCCATGGAATGGAATGCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | GGCTTCCTGGGTTGGTTTTCAGCTATGCCTGCCTCATTAGATAGTTaGCAGATCTCTTTGGGGACACAAGGCACTCCAAGCCGTCTTGGG | + |
Preference number: 5 (lower is better) Translates to: GFLGWFSAMPASLDS*QISLGTQGTPSRLG Trigger: CCCAAGACGGCTTGGAGTGCCTTGTGTCCCCAAAGAGATCTGCCAACTATCTAATGAGGCAGGCATAGCTGAAAACCAACCCAGGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCAGGCTCGGTGGCTCTaGGCCGTGGGCCTCTCCCCA | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGQARWL*AVGLSP Trigger: TGGGGAGAGGCCCACGGCCAAGAGCCACCGAGCCTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | CGGCAGTCTGGGAAATCGCCTGGGATGTTAGGAGACCGTCTGTATTaGGAATGCACTGTAGCCTCTTTTAGTCCACCAACTCGTGCACCT | + |
Preference number: 5 (lower is better) Translates to: RQSGKSPGMLGDRLY*ECTVASFSPPTRAP Trigger: AGGTGCACGAGTTGGTGGACTAAAAGAGGCTACAGTGCATTCTCAATACAGACGGTCTCCTAACATCCCAGGCGATTTCCCAGACTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | AAGTCATTCAGAATGGACAAGCAGACGTTACTAGTCAGTTCTTGCTaGGCTCTGCAGGGAGCCCTCCTGATCTCAGAACTGGGCCCACAC | + |
Preference number: 5 (lower is better) Translates to: KSFRMDKQTLLVSSC*ALQGALLISELGPH Trigger: GTGTGGGCCCAGTTCTGAGATCAGGAGGGCTCCCTGCAGAGCTCAGCAAGAACTGACTAGTAACGTCTGCTTGTCCATTCTGAATGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | GTAAAGCATGAGGCTCCCTTGCCGCTTCCCAGACAAGCAGTGAACTaGAGCAAAAGTCAGGCCTGCGTCTATGCTACACATTTGAGAGAG | + |
Preference number: 5 (lower is better) Translates to: VKHEAPLPLPRQAVN*SKSQACVYATHLRE Trigger: CTCTCTCAAATGTGTAGCATAGACGCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | ACACTGCTTCTTGTCTTTGGTGAAGAGAACGACCATCAGAGCTCCTaGAAGTGTCAGTCCACCAGTGATGTGGTGTCTCCTCGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: TLLLVFGEENDHQSS*KCQSTSDVVSPRHP Trigger: AGGATGCCGAGGAGACACCACATCACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | TTTTTGGCCATCTCCTGCAACCGTCTAGGAAGGCGTTTGACATTGTaGCTCATGGCTCTACGTCGCATGTGCCTTGGAAGAGTCTGGAAA | + |
Preference number: 5 (lower is better) Translates to: FLAISCNRLGRRLTL*LMALRRMCLGRVWK Trigger: TTTCCAGACTCTTCCAAGGCACATGCGACGTAGAGCCATGAGCCACAATGTCAAACGCCTTCCTAGACGGTTGCAGGAGATGGCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | ATCTTCAGCAAACAGAACTCCAGCACGGCAGTCTGGGAAATCGCCTaGGATGTTAGGAGACCGTCTGTATTGAGAATGCACTGTAGCCTC | + |
Preference number: 5 (lower is better) Translates to: IFSKQNSSTAVWEIA*DVRRPSVLRMHCSL Trigger: GAGGCTACAGTGCATTCTCAATACAGACGGTCTCCTAACATCCCAGGCGATTTCCCAGACTGCCGTGCTGGAGTTCTGTTTGCTGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCACTCCAAGCCGTCTaGGGTCAGTCTCCTGAGCAC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARALQAV*GQSPEH Trigger: GTGCTCAGGAGACTGACCCAAGACGGCTTGGAGTGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGATACTGCAGTGAGGTaGGAGGCCGCAGCAGCACCA | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARDTAVR*EAAAAP Trigger: TGGTGCTGCTGCGGCCTCCAACCTCACTGCAGTATC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | CTAGGAAGGCGTTTGACATTGTGGCTCATGGCTCTACGTCGCATGTaGCTTGGAAGAGTCTGGAAAACCAGTGAGTTAGATGACTTCTGG | + |
Preference number: 5 (lower is better) Translates to: LGRRLTLWLMALRRM*LGRVWKTSELDDFW Trigger: CCAGAAGTCATCTAACTCACTGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTAGAGCCATGAGCCACAATGTCAAACGCCTTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | CTCCAGAAGCAGCTGCTTCACTCGCTCATTAGCTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGATCGCTGTGGGGGCAAATTTACTCT | + |
Preference number: 5 (lower is better) Translates to: LQKQLLHSLISLVSF*IRQSSGSLWGQIYS Trigger: AGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCTAATGAGCGAGTGAAGCAGCTGCTTCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGCAGGAGGCAGAGGTTaGTCATGGCTCGATAGCAGG | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARAGGRG*SWLDSR Trigger: CCTGCTATCGAGCCATGACAAACCTCTGCCTCCTGC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAAGCATGAGGCTCCCTaGCCGCTTCCCAGACAAGCA | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARKHEAP*PLPRQA Trigger: TGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGCCATGCCCCAGCCCTaGGGAATGAGGACATCCCAG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGAMPQP*GMRTSQ Trigger: CTGGGATGTCCTCATTCCCAAGGGCTGGGGCATGGC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | GATGATATCCCTCCCAACAACTCAAACACTGCTTCTTGTCTTTGGTaGAGAGAACGACCATCAGAGCTCCTGCAAGTGTCAGTCCACCAG | + |
Preference number: 5 (lower is better) Translates to: DDIPPNNSNTASCLW*RERPSELLQVSVHQ Trigger: CTGGTGGACTGACACTTGCAGGAGCTCTGATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTGTTTGAGTTGTTGGGAGGGATATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | TGCGATCCGGGCACCAGCAACTCACTTCTCATCCGGTTTAAATCCTaGTCCAAGAGTTTATTCTCGGTGACACTCCTACAGATATCCTGG | + |
Preference number: 5 (lower is better) Translates to: CDPGTSNSLLIRFKS*SKSLFSVTLLQISW Trigger: CCAGGATATCTGTAGGAGTGTCACCGAGAATAAACTCTTGGATCAGGATTTAAACCGGATGAGAAGTGAGTTGCTGGTGCCCGGATCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | ATCCTTAGCTTGATCTTCAGCAAACAGAACTCCAGCACGGCAGTCTaGGAAATCGCCTGGGATGTTAGGAGACCGTCTGTATTGAGAATG | + |
Preference number: 5 (lower is better) Translates to: ILSLIFSKQNSSTAV*EIAWDVRRPSVLRM Trigger: CATTCTCAATACAGACGGTCTCCTAACATCCCAGGCGATTTCCCAGACTGCCGTGCTGGAGTTCTGTTTGCTGAAGATCAAGCTAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGATACTGCAGTGAGGTaGGAGGCCGCAGCAGCACCA | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGDTAVR*EAAAAP Trigger: TGGTGCTGCTGCGGCCTCCAACCTCACTGCAGTATC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | ACATTGTGGCTCATGGCTCTACGTCGCATGTGCCTTGGAAGAGTCTaGAAAACCAGTGAGTTAGATGACTTCTGGGTCACAGCTTTTAAC | + |
Preference number: 5 (lower is better) Translates to: TLWLMALRRMCLGRV*KTSELDDFWVTAFN Trigger: GTTAAAAGCTGTGACCCAGAAGTCATCTAACTCACTGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTAGAGCCATGAGCCACAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | TCTCCCCAAGGCAGTAACCCCACTTCTTCACCATATGAAACCGTTTaGCGTGCCAGATGTGAGTCTCTAACCATATGTTCTTCTGTTGTC | + |
Preference number: 5 (lower is better) Translates to: SPQGSNPTSSPYETV*RARCESLTICSSVV Trigger: GACAACAGAAGAACATATGGTTAGAGACTCACATCTGGCACGCCAAACGGTTTCATATGGTGAAGAAGTGGGGTTACTGCCTTGGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | CGAAACTTGGTATCTTTCTGGATCAGGCAAAGCTCTGGATCGCTGTaGGGGCAAATTTACTCTCGGATCCCTAACTGTCAATCCCAGAAT | + |
Preference number: 5 (lower is better) Translates to: RNLVSFWIRQSSGSL*GQIYSRIPNCQSQN Trigger: ATTCTGGGATTGACAGTTAGGGATCCGAGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS CCA 90 bp | GCACATCCCTTCCTCACAGGTAAATTCCGAAACTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGATCGCTGTGGGGGCAAATTTACTCT | + |
Preference number: 5 (lower is better) Translates to: AHPFLTGKFRNLVSF*IRQSSGSLWGQIYS Trigger: AGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGGAATTTACCTGTGAGGAAGGGATGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTCTTGTTTCTGAGATaGGGACGGCTTCCCCTTTCC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARLLFLR*GRLPLS Trigger: GGAAAGGGGAAGCCGTCCCAATCTCAGAAACAAGAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCGTCTAGGAAGGCGTTaGACATTGTGGCTCATGGCT | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARRLGRR*TLWLMA Trigger: AGCCATGAGCCACAATGTCAAACGCCTTCCTAGACG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCTCCGCCTCTTTTTaGGCCATCTCCTGCAACCGT | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARFSASF*AISCNR Trigger: ACGGTTGCAGGAGATGGCCAAAAAAGAGGCGGAGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGCAGGAGGCAGAGGTTaGTCATGGCTCGATAGCAGG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGAGGRG*SWLDSR Trigger: CCTGCTATCGAGCCATGACAAACCTCTGCCTCCTGC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAGCATGAGGCTCCCTaGCCGCTTCCCAGACAAGCA | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKHEAP*PLPRQA Trigger: TGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGAGTTGGCAGATCTCTTaGGGGACACAAGGCACTCCA | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARSWQIS*GTQGTP Trigger: TGGAGTGCCTTGTGTCCCCAAAGAGATCTGCCAACT...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCTGGCTTCCTGGGTaGGTTTTCAGCTATGCCTGC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARFWLPG*VFSYAC Trigger: GCAGGCATAGCTGAAAACCAACCCAGGAAGCCAGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGGTTACTAGTCAGTTCTaGCTGAGCTCTGCAGGGAGC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARVTSQF*LSSAGS Trigger: GCTCCCTGCAGAGCTCAGCAAGAACTGACTAGTAAC...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | ATCAGAAGTATGGGTATCTTAGATTCACGAGCCCCTAAATCAAGTTaGGATCCGGGCACCAGCAACTCACTTCTCATCCGGTTTAAATCC | + |
Preference number: 5 (lower is better) Translates to: IRSMGILDSRAPKSS*DPGTSNSLLIRFKS Trigger: GGATTTAAACCGGATGAGAAGTGAGTTGCTGGTGCCCGGATCGCAACTTGATTTAGGGGCTCGTGAATCTAAGATACCCATACTTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 90 bp | ATTAGCTTGGTATCTTTCTGGATCAGGCAAAGCTCTGGATCGCTGTaGGGGCAAATTTACTCTCGGATCCCTAACTGTCAATCCCAGAAT | + |
Preference number: 5 (lower is better) Translates to: ISLVSFWIRQSSGSL*GQIYSRIPNCQSQN Trigger: ATTCTGGGATTGACAGTTAGGGATCCGAGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCAGCGGCTCGTGCTaGAGCAAAAGTAGAAGCAGT | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARFSGSC*SKSRSS Trigger: ACTGCTTCTACTTTTGCTCAAGCACGAGCCGCTGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTACGTCGCATGTGCCTaGGAAGAGTCTGGAAAACCA | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARYVACA*EESGKP Trigger: TGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 90 bp | ATTGCTCATTCACATCAGACTCAGGAAGCAAGTGGGGACTCATCTTaGTTTGCCACTGCCTTGAGGTTCCAGAATGAAGCTCTTGTTTCT | + |
Preference number: 5 (lower is better) Translates to: IAHSHQTQEASGDSS*FATALRFQNEALVS Trigger: AGAAACAAGAGCTTCATTCTGGAACCTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACTTGCTTCCTGAGTCTGATGTGAATGAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTCTTGTTTCTGAGATaGGGACGGCTTCCCCTTTCC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLLFLR*GRLPLS Trigger: GGAAAGGGGAAGCCGTCCCAATCTCAGAAACAAGAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTCCAGAATGAAGCTCTaGTTTCTGAGATTGGGACGG | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARSRMKL*FLRLGR Trigger: CCGTCCCAATCTCAGAAACAAGAGCTTCATTCTGGA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCGTCTAGGAAGGCGTTaGACATTGTGGCTCATGGCT | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGRLGRR*TLWLMA Trigger: AGCCATGAGCCACAATGTCAAACGCCTTCCTAGACG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCTCCGCCTCTTTTTaGGCCATCTCCTGCAACCGT | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFSASF*AISCNR Trigger: ACGGTTGCAGGAGATGGCCAAAAAAGAGGCGGAGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCACTGCTTCTTGTCTTaGGTGAAGAGAACGACCATC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARHCFLS*VKRTTI Trigger: GATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCTGGCTTCCTGGGTaGGTTTTCAGCTATGCCTGC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFWLPG*VFSYAC Trigger: GCAGGCATAGCTGAAAACCAACCCAGGAAGCCAGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGTTACTAGTCAGTTCTaGCTGAGCTCTGCAGGGAGC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGVTSQF*LSSAGS Trigger: GCTCCCTGCAGAGCTCAGCAAGAACTGACTAGTAAC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCAAGTGGGGACTCATCTaGATTTGCCACTGCCTTGAG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGKWGLI*ICHCLE Trigger: CTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACTT...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCAGCGGCTCGTGCTaGAGCAAAAGTAGAAGCAGT | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFSGSC*SKSRSS Trigger: ACTGCTTCTACTTTTGCTCAAGCACGAGCCGCTGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTACGTCGCATGTGCCTaGGAAGAGTCTGGAAAACCA | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGYVACA*EESGKP Trigger: TGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCTCAAACACTGCTTCTaGTCTTTGGTGAAGAGAACG | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARLKHCF*SLVKRT Trigger: CGTTCTCTTCACCAAAGACAAGAAGCAGTGTTTGAG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTCCAGAATGAAGCTCTaGTTTCTGAGATTGGGACGG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGSRMKL*FLRLGR Trigger: CCGTCCCAATCTCAGAAACAAGAGCTTCATTCTGGA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGCCATATGTTCTTCTGTaGTCTGCGGTTAAATTCCAG | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARPYVLL*SAVKFQ Trigger: CTGGAATTTAACCGCAGACAACAGAAGAACATATGG...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCACTGCTTCTTGTCTTaGGTGAAGAGAACGACCATC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGHCFLS*VKRTTI Trigger: GATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCACTCGCTCATTAGCTaGGTATCTTTCTGGATCAGG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGHSLIS*VSFWIR Trigger: CCTGATCCAGAAAGATACCAAGCTAATGAGCGAGTG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCGGTTTTGGAGGAAGATaGCTCATTCACATCAGACTC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGGFGGR*LIHIRL Trigger: GAGTCTGATGTGAATGAGCAATCTTCCTCCAAAACC...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 90 bp | CTATGCTACACATTTGAGAGAGCGCTTTCAGTAGTTCTTCCTCTTTaGCTTTCAACTCCAAACAGCAGTAATATGATAAATCCTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: LCYTFERALSVVLPL*LSTPNSSNMINPAG Trigger: TCCTGCAGGATTTATCATATTACTGCTGTTTGGAGTTGAAAGGCAAAGAGGAAGAACTACTGAAAGCGCTCTCTCAAATGTGTAGCATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | TTCCACGCAGTTCCACAATATATCTTAAATCAGATGGTGACAGAGACAGCCAGGTTCTTAAACATGGTTTaGGAGGAAGATTGCTCATTC | + |
Preference number: 5 (lower is better) Translates to: FHAVPQYILNQMVTETARFLNMV*EEDCSF Trigger: GAATGAGCAATCTTCCTCCAAAACCATGTTTAAGAA...CCTGGCTGTCTCTGTCACCATCTGATTTAAGATATATTGTGGAACTGCGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCCATATGTTCTTCTGTaGTCTGCGGTTAAATTCCAG | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGPYVLL*SAVKFQ Trigger: CTGGAATTTAACCGCAGACAACAGAAGAACATATGG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCTTCTTAAACATGGTTTaGGAGGAAGATTGCTCATTC | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGFLNMV*EEDCSF Trigger: GAATGAGCAATCTTCCTCCAAAACCATGTTTAAGAA...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTTTCTGTGAGCTTTGACCAAAATAGTTATAATTTAAGACCAGGCCTGAACAGTGGCATGTaGTTTTTATTTCTTCTAGGA | + |
Preference number: 5 (lower is better) Translates to: QPGLSVSFDQNSYNLRPGLNSGM*FLFLLG Trigger: TCCTAGAAGAAATAAAAACAACATGCCACTGTTCAG...GCCTGGTCTTAAATTATAACTATTTTGGTCAAAGCTCACAGAAAGTCCTGGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | GAGGTTAGTCCTGGAAGGGGGCCTGACCACAGCCCCTaGGTCAGAGCTTCCTGCCCAGCTATGGGCGGCCCT | + |
Preference number: 6 (lower is better) Translates to: EVSPGRGPDHSP*VRASCPAMGGP Trigger: AGGGCCGCCCATAGCTGGGCAGGAAGCTCTGACGCAGGGGCTGTGGTCAGGCCCCCTTCCAGGACTAACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | GTGAGGTTGGAGGCCGCAGCAGCACCAGGCCCCTCATaGCTGCTGACTGGCTGGACAACATTTCCAGCAAGC | + |
Preference number: 6 (lower is better) Translates to: VRLEAAAAPGPS*LLTGWTTFPAS Trigger: GCTTGCTGGAAATGTTGTCCAGCCAGTCAGCAGCCATGAGGGGCCTGGTGCTGCTGCGGCCTCCAACCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | CGACCATCAGAGCTCCTGCAAGTGTCAGTCCACCAGTaGTGTGGTGTCTCCTCGGCATCCTCTTCCCCTGTG | + |
Preference number: 6 (lower is better) Translates to: RPSELLQVSVHQ*CGVSSASSSPV Trigger: CACAGGGGAAGAGGATGCCGAGGAGACACCACATCACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | CTCTTCCCCTGTGTGTACAGGAGCAGCCCTCAGTGCTaGGGTCAGGATACAGTGCGAAAGAGGGCCTATCAG | + |
Preference number: 6 (lower is better) Translates to: LFPCVYRSSPQC*GQDTVRKRAYQ Trigger: CTGATAGGCCCTCTTTCGCACTGTATCCTGACCTCAGCACTGAGGGCTGCTCCTGTACACACAGGGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | GGTAACCGGCCCAAGCATTTCCCTGGGATACTTATTTaGCCGGTAAAGCATGAGGCTCCCTTGCCGCTTCCC | + |
Preference number: 6 (lower is better) Translates to: GNRPKHFPGILI*PVKHEAPLPLP Trigger: GGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGGGAAATGCTTGGGCCGGTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | AGCATGAGGCTCCCTTGCCGCTTCCCAGACAAGCAGTaGACTGCAGCAAAAGTCAGGCCTGCGTCTATGCTA | + |
Preference number: 6 (lower is better) Translates to: SMRLPCRFPDKQ*TAAKVRPASML Trigger: TAGCATAGACGCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | GCTGGATCATCTGTATGGTCAGACAGAGGCTTCCAATaGGCACAAGACCAGCTGCCGGTGCACATCCCTTCC | + |
Preference number: 6 (lower is better) Translates to: AGSSVWSDRGFQ*AQDQLPVHIPS Trigger: GGAAGGGATGTGCACCGGCAGCTGGTCTTGTGCTCATTGGAAGCCTCTGTCTGACCATACAGATGATCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS TCA 72 bp | CACCTCAATGGTAATTCTTGCAAACCGATACTGCAGTaGGGTTGGAGGCCGCAGCAGCACCAGGCCCCTCAT | + |
Preference number: 6 (lower is better) Translates to: HLNGNSCKPILQ*GWRPQQHQAPH Trigger: ATGAGGGGCCTGGTGCTGCTGCGGCCTCCAACCTCACTGCAGTATCGGTTTGCAAGAATTACCATTGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | GAGGCTCCCTTGCCGCTTCCCAGACAAGCAGTGAACTaGAGCAAAAGTCAGGCCTGCGTCTATGCTACACAT | + |
Preference number: 6 (lower is better) Translates to: EAPLPLPRQAVN*SKSQACVYATH Trigger: ATGTGTAGCATAGACGCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | CTGATCTCAGAACTGGGCCCACACCAGGACGAGAGCTaGTTCAGCAGTTTCCTACTCCGAACAACACAGAGC | + |
Preference number: 6 (lower is better) Translates to: LISELGPHQDES*FSSFLLRTTQS Trigger: GCTCTGTGTTGTTCGGAGTAGGAAACTGCTGAAGCAGCTCTCGTCCTGGTGTGGGCCCAGTTCTGAGATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | ATCAGAGCTCCTGCAAGTGTCAGTCCACCAGTGATGTaGTGTCTCCTCGGCATCCTCTTCCCCTGTGTGTAC | + |
Preference number: 6 (lower is better) Translates to: IRAPASVSPPVM*CLLGILFPCVY Trigger: GTACACACAGGGGAAGAGGATGCCGAGGAGACACCACATCACTGGTGGACTGACACTTGCAGGAGCTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 90 bp | CCAGCTGCCGGTGCACATCCCTTCCTCACAGGTAAATTCCGAAACTaGGTATCTTTCTGGATCAGGCAAAGCTCTGGATCGCTGTGGGGG | + |
Preference number: 6 (lower is better) Translates to: PAAGAHPFLTGKFRN*VSFWIRQSSGSLWG Trigger: CCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGGAATTTACCTGTGAGGAAGGGATGTGCACCGGCAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS CCA 72 bp | AATATGATAAATCCTGCAGGAGGCAGAGGTTTGTCATaGCTCGATAGCAGGCTCGGTGGCTCTTGGCCGTGG | + |
Preference number: 6 (lower is better) Translates to: NMINPAGGRGLS*LDSRLGGSWPW Trigger: CCACGGCCAAGAGCCACCGAGCCTGCTATCGAGCCATGACAAACCTCTGCCTCCTGCAGGATTTATCATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | AGATCTCTTTGGGGACACAAGGCACTCCAAGCCGTCTaGGGTCAGTCTCCTGAGCACCAGGCATTGAAGCTA | + |
Preference number: 6 (lower is better) Translates to: RSLWGHKALQAV*GQSPEHQALKL Trigger: TAGCTTCAATGCCTGGTGCTCAGGAGACTGACCCAAGACGGCTTGGAGTGCCTTGTGTCCCCAAAGAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | ATTCCATTCCATGGCCACTTTGGTCCCCTCCTGCGCTaGACAGCCTGTAACTTCTGGCTTCCTGGGTTGGTT | + |
Preference number: 6 (lower is better) Translates to: IPFHGHFGPLLR*TACNFWLPGLV Trigger: AACCAACCCAGGAAGCCAGAAGTTACAGGCTGTCAAGCGCAGGAGGGGACCAAAGTGGCCATGGAATGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 90 bp | CATTTCCCTGGGATACTTATTTGCCCGGTAAAGCATGAGGCTCCCTaGCCGCTTCCCAGACAAGCAGTGAACTGCAGCAAAAGTCAGGCC | + |
Preference number: 6 (lower is better) Translates to: HFPGILICPVKHEAP*PLPRQAVNCSKSQA Trigger: GGCCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | GCATTTCCCTGGGATACTTATTTGCCCGGTAAAGCATaGGGCTCCCTTGCCGCTTCCCAGACAAGCAGTGAA | + |
Preference number: 6 (lower is better) Translates to: AFPWDTYLPGKA*GSLAASQTSSE Trigger: TTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCCAGGGAAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | ATCTCCTGCAACCGTCTAGGAAGGCGTTTGACATTGTaGCTCATGGCTCTACGTCGCATGTGCCTTGGAAGA | + |
Preference number: 6 (lower is better) Translates to: ISCNRLGRRLTL*LMALRRMCLGR Trigger: TCTTCCAAGGCACATGCGACGTAGAGCCATGAGCCACAATGTCAAACGCCTTCCTAGACGGTTGCAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | GCCCCAGCCCAGTCGGTCTTCGCCAGTCACTTTTCCTaGCTGCTGAATCAGAAGTATGGGTATCTTAGATTC | + |
Preference number: 6 (lower is better) Translates to: APAQSVFASHFS*LLNQKYGYLRF Trigger: GAATCTAAGATACCCATACTTCTGATTCAGCAGCCAGGAAAAGTGACTGGCGAAGACCGACTGGGCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | CAGCTGCTTCACTCGCTCATTAGCTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGATCGCTGTGGGGGCAA | + |
Preference number: 6 (lower is better) Translates to: QLLHSLISLVSF*IRQSSGSLWGQ Trigger: TTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCTAATGAGCGAGTGAAGCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS CCA 72 bp | CCCTCCAGAAGCAGCTGCTTCACTCGCTCATTAGCTTaGTATCTTTCTGGATCAGGCAAAGCTCTGGATCGC | + |
Preference number: 6 (lower is better) Translates to: PSRSSCFTRSLA*YLSGSGKALDR Trigger: GCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCTAATGAGCGAGTGAAGCAGCTGCTTCTGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS CAA 72 bp | TTTTTGGCCATCTCCTGCAACCGTCTAGGAAGGCGTTaGACATTGTGGCTCATGGCTCTACGTCGCATGTGC | + |
Preference number: 6 (lower is better) Translates to: FLAISCNRLGRR*TLWLMALRRMC Trigger: GCACATGCGACGTAGAGCCATGAGCCACAATGTCAAACGCCTTCCTAGACGGTTGCAGGAGATGGCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | GGGATACTTATTTGCCCGGTAAAGCATGAGGCTCCCTaGCCGCTTCCCAGACAAGCAGTGAACTGCAGCAAA | + |
Preference number: 6 (lower is better) Translates to: GILICPVKHEAP*PLPRQAVNCSK Trigger: TTTGCTGCAGTTCACTGCTTGTCTGGGAAGCGGCAAGGGAGCCTCATGCTTTACCGGGCAAATAAGTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | GCTATGCCTGCCTCATTAGATAGTTGGCAGATCTCTTaGGGGACACAAGGCACTCCAAGCCGTCTTGGGTCA | + |
Preference number: 6 (lower is better) Translates to: AMPASLDSWQIS*GTQGTPSRLGS Trigger: TGACCCAAGACGGCTTGGAGTGCCTTGTGTCCCCAAAGAGATCTGCCAACTATCTAATGAGGCAGGCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | CCCAGTCGGTCTTCGCCAGTCACTTTTCCTGGCTGCTaGATCAGAAGTATGGGTATCTTAGATTCACGAGCC | + |
Preference number: 6 (lower is better) Translates to: PSRSSPVTFPGC*IRSMGILDSRA Trigger: GGCTCGTGAATCTAAGATACCCATACTTCTGATTCAGCAGCCAGGAAAAGTGACTGGCGAAGACCGACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | AGAATGGACAAGCAGACGTTACTAGTCAGTTCTTGCTaGGCTCTGCAGGGAGCCCTCCTGATCTCAGAACTG | + |
Preference number: 6 (lower is better) Translates to: RMDKQTLLVSSC*ALQGALLISEL Trigger: CAGTTCTGAGATCAGGAGGGCTCCCTGCAGAGCTCAGCAAGAACTGACTAGTAACGTCTGCTTGTCCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | CCCAGACAAGCAGTGAACTGCAGCAAAAGTCAGGCCTaGGTCTATGCTACACATTTGAGAGAGCGCTTTCAG | + |
Preference number: 6 (lower is better) Translates to: PRQAVNCSKSQA*VYATHLRERFQ Trigger: CTGAAAGCGCTCTCTCAAATGTGTAGCATAGACGCAGGCCTGACTTTTGCTGCAGTTCACTGCTTGTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | CTTGTCTTTGGTGAAGAGAACGACCATCAGAGCTCCTaGAAGTGTCAGTCCACCAGTGATGTGGTGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: LVFGEENDHQSS*KCQSTSDVVSP Trigger: AGGAGACACCACATCACTGGTGGACTGACACTTGCAGGAGCTCTGATGGTCGTTCTCTTCACCAAAGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | ATGGGTATCTTAGATTCACGAGCCCCTAAATCAAGTTaGGATCCGGGCACCAGCAACTCACTTCTCATCCGG | + |
Preference number: 6 (lower is better) Translates to: MGILDSRAPKSS*DPGTSNSLLIR Trigger: CCGGATGAGAAGTGAGTTGCTGGTGCCCGGATCGCAACTTGATTTAGGGGCTCGTGAATCTAAGATACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | CCGAAACTTGGTATCTTTCTGGATCAGGCAAAGCTCTaGATCGCTGTGGGGGCAAATTTACTCTCGGATCCC | + |
Preference number: 6 (lower is better) Translates to: PKLGIFLDQAKL*IAVGANLLSDP Trigger: GGGATCCGAGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS CCA 72 bp | AAACAGAACTCCAGCACGGCAGTCTGGGAAATCGCCTaGGATGTTAGGAGACCGTCTGTATTGAGAATGCAC | + |
Preference number: 6 (lower is better) Translates to: KQNSSTAVWEIA*DVRRPSVLRMH Trigger: GTGCATTCTCAATACAGACGGTCTCCTAACATCCCAGGCGATTTCCCAGACTGCCGTGCTGGAGTTCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | AGCAGTAATATGATAAATCCTGCAGGAGGCAGAGGTTaGTCATGGCTCGATAGCAGGCTCGGTGGCTCTTGG | + |
Preference number: 6 (lower is better) Translates to: SSNMINPAGGRG*SWLDSRLGGSW Trigger: CCAAGAGCCACCGAGCCTGCTATCGAGCCATGACAAACCTCTGCCTCCTGCAGGATTTATCATATTACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | ACCCTCCAGAAGCAGCTGCTTCACTCGCTCATTAGCTaGGTATCTTTCTGGATCAGGCAAAGCTCTGGATCG | + |
Preference number: 6 (lower is better) Translates to: TLQKQLLHSLIS*VSFWIRQSSGS Trigger: CGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGCTAATGAGCGAGTGAAGCAGCTGCTTCTGGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079028.6 |
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CDS TCA 72 bp | GGGCGTCGTCTGTACTTCTCTAGAAGATCCTTAGCTTaGTCTTCAGCAAACAGAACTCCAGCACGGCAGTCT | + |
Preference number: 6 (lower is better) Translates to: GRRLYFSRRSLA*SSANRTPARQS Trigger: AGACTGCCGTGCTGGAGTTCTGTTTGCTGAAGATCAAGCTAAGGATCTTCTAGAGAAGTACAGACGACGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | CTCATGGCTCTACGTCGCATGTGCCTTGGAAGAGTCTaGAAAACCAGTGAGTTAGATGACTTCTGGGTCACA | + |
Preference number: 6 (lower is better) Translates to: LMALRRMCLGRV*KTSELDDFWVT Trigger: TGTGACCCAGAAGTCATCTAACTCACTGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTAGAGCCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | AAGAGTTTATTCTCGGTGACACTCCTACAGATATCCTaGTCCCAGATGAAGCTGTGTGCACATGCCACAGGC | + |
Preference number: 6 (lower is better) Translates to: KSLFSVTLLQIS*SQMKLCAHATG Trigger: GCCTGTGGCATGTGCACACAGCTTCATCTGGGACCAGGATATCTGTAGGAGTGTCACCGAGAATAAACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | ATTCAGAATGGACAAGCAGACGTTACTAGTCAGTTCTaGCTGAGCTCTGCAGGGAGCCCTCCTGATCTCAGA | + |
Preference number: 6 (lower is better) Translates to: IQNGQADVTSQF*LSSAGSPPDLR Trigger: TCTGAGATCAGGAGGGCTCCCTGCAGAGCTCAGCAAGAACTGACTAGTAACGTCTGCTTGTCCATTCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | TCACATCAGACTCAGGAAGCAAGTGGGGACTCATCTTaGTTTGCCACTGCCTTGAGGTTCCAGAATGAAGCT | + |
Preference number: 6 (lower is better) Translates to: SHQTQEASGDSS*FATALRFQNEA Trigger: AGCTTCATTCTGGAACCTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACTTGCTTCCTGAGTCTGATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | GCAGCAAAAGTCAGGCCTGCGTCTATGCTACACATTTaGGAGAGCGCTTTCAGTAGTTCTTCCTCTTTGCCT | + |
Preference number: 6 (lower is better) Translates to: AAKVRPASMLHI*ESAFSSSSSLP Trigger: AGGCAAAGAGGAAGAACTACTGAAAGCGCTCTCTCAAATGTGTAGCATAGACGCAGGCCTGACTTTTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | CCTCCCAACAACTCAAACACTGCTTCTTGTCTTTGGTaGAGAGAACGACCATCAGAGCTCCTGCAAGTGTCA | + |
Preference number: 6 (lower is better) Translates to: PPNNSNTASCLW*RERPSELLQVS Trigger: TGACACTTGCAGGAGCTCTGATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTGTTTGAGTTGTTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | GGGAAATCGCCTGGGATGTTAGGAGACCGTCTGTATTaGGAATGCACTGTAGCCTCTTTTAGTCCACCAACT | + |
Preference number: 6 (lower is better) Translates to: GKSPGMLGDRLY*ECTVASFSPPT Trigger: AGTTGGTGGACTAAAAGAGGCTACAGTGCATTCTCAATACAGACGGTCTCCTAACATCCCAGGCGATTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | CGTTTGACATTGTGGCTCATGGCTCTACGTCGCATGTaGCTTGGAAGAGTCTGGAAAACCAGTGAGTTAGAT | + |
Preference number: 6 (lower is better) Translates to: RLTLWLMALRRM*LGRVWKTSELD Trigger: ATCTAACTCACTGGTTTTCCAGACTCTTCCAAGGCACATGCGACGTAGAGCCATGAGCCACAATGTCAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | GTATCTTTCTGGATCAGGCAAAGCTCTGGATCGCTGTaGGGGCAAATTTACTCTCGGATCCCTAACTGTCAA | + |
Preference number: 6 (lower is better) Translates to: VSFWIRQSSGSL*GQIYSRIPNCQ Trigger: TTGACAGTTAGGGATCCGAGAGTAAATTTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | TTCCTCACAGGTAAATTCCGAAACTTGGTATCTTTCTaGATCAGGCAAAGCTCTGGATCGCTGTGGGGGCAA | + |
Preference number: 6 (lower is better) Translates to: FLTGKFRNLVSF*IRQSSGSLWGQ Trigger: TTGCCCCCACAGCGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGGAATTTACCTGTGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS CAA 72 bp | GGTGCACATCCCTTCCTCACAGGTAAATTCCGAAACTaGGTATCTTTCTGGATCAGGCAAAGCTCTGGATCG | + |
Preference number: 6 (lower is better) Translates to: GAHPFLTGKFRN*VSFWIRQSSGS Trigger: CGATCCAGAGCTTTGCCTGATCCAGAAAGATACCAAGTTTCGGAATTTACCTGTGAGGAAGGGATGTGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052290.14 |
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CDS TCA 72 bp | GGCACCAGCAACTCACTTCTCATCCGGTTTAAATCCTaGTCCAAGAGTTTATTCTCGGTGACACTCCTACAG | + |
Preference number: 6 (lower is better) Translates to: GTSNSLLIRFKS*SKSLFSVTLLQ Trigger: CTGTAGGAGTGTCACCGAGAATAAACTCTTGGATCAGGATTTAAACCGGATGAGAAGTGAGTTGCTGGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CCA 72 bp | GAAGATTGCTCATTCACATCAGACTCAGGAAGCAAGTaGGGACTCATCTTGATTTGCCACTGCCTTGAGGTT | + |
Preference number: 6 (lower is better) Translates to: EDCSFTSDSGSK*GLILICHCLEV Trigger: AACCTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACTTGCTTCCTGAGTCTGATGTGAATGAGCAATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | TATCCCTCCCAACAACTCAAACACTGCTTCTTGTCTTaGGTGAAGAGAACGACCATCAGAGCTCCTGCAAGT | + |
Preference number: 6 (lower is better) Translates to: YPSQQLKHCFLS*VKRTTIRAPAS Trigger: ACTTGCAGGAGCTCTGATGGTCGTTCTCTTCACCAAAGACAAGAAGCAGTGTTTGAGTTGTTGGGAGGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | AAGCAAGTGGGGACTCATCTTGATTTGCCACTGCCTTaGGGTTCCAGAATGAAGCTCTTGTTTCTGAGATTG | + |
Preference number: 6 (lower is better) Translates to: KQVGTHLDLPLP*GSRMKLLFLRL Trigger: CAATCTCAGAAACAAGAGCTTCATTCTGGAACCTCAAGGCAGTGGCAAATCAAGATGAGTCCCCACTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | TTTATTTCTTCTAGGACAGCCAGTTTAAGAGTTGGGTaGAGCCAGATCCACAGCTGCCTATCCTCAGAAGCA | + |
Preference number: 6 (lower is better) Translates to: FISSRTASLRVG*SQIHSCLSSEA Trigger: TGCTTCTGAGGATAGGCAGCTGTGGATCTGGCTTCACCCAACTCTTAAACTGGCTGTCCTAGAAGAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | GGTGTCAGGAGTGGGTCAGGCATGCAGATATTTGACTaGACGGGTTCTGAACAGTGGCATGTTGTTTTTATT | + |
Preference number: 6 (lower is better) Translates to: GVRSGSGMQIFD*TGSEQWHVVFI Trigger: AATAAAAACAACATGCCACTGTTCAGAACCCGTCAAGTCAAATATCTGCATGCCTGACCCACTCCTGACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS TCA 72 bp | GTGTCAGGAGTGGGTCAGGCATGCAGATATTTGACTTaGCGGGTTCTGAACAGTGGCATGTTGTTTTTATTT | + |
Preference number: 6 (lower is better) Translates to: VSGVGQACRYLT*RVLNSGMLFLF Trigger: AAATAAAAACAACATGCCACTGTTCAGAACCCGTCAAGTCAAATATCTGCATGCCTGACCCACTCCTGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS CAA 72 bp | CCTGCTTTCCAGCCTCCCTTTTTCTTAAACATGGTTTaGGAGGAAGATTGCTCATTCACATCAGACTCAGGA | + |
Preference number: 6 (lower is better) Translates to: PAFQPPFFLNMV*EEDCSFTSDSG Trigger: TCCTGAGTCTGATGTGAATGAGCAATCTTCCTCCAAAACCATGTTTAAGAAAAAGGGAGGCTGGAAAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |
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CDS GCA 72 bp | ACATTTGAGAGAGCGCTTTCAGTAGTTCTTCCTCTTTaGCTTTCAACTCCAAACAGCAGTAATATGATAAAT | + |
Preference number: 6 (lower is better) Translates to: TFERALSVVLPL*LSTPNSSNMIN Trigger: ATTTATCATATTACTGCTGTTTGGAGTTGAAAGGCAAAGAGGAAGAACTACTGAAAGCGCTCTCTCAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052290.14 ENSMUST00000079028.6 |