Pregenerated sensors for PON3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029759Ensembl transcript IDs: ENSMUST00000031773.9, ENSMUST00000129344.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACGGTGCTGCCCTGAAGCACAGAGCCGTTGTTCGCATACAGTGTaGTCACCCTGGGCTTATCTGACAAAGAGTCCTGGATGCGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: PRCCPEAQSRCSHTV*SPWAYLTKSPGCVV Trigger: TACTACGCATCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCACACTGTATGCGAACAACGGCTCTGTGCTTCAGGGCAGCACCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | TGCCCTGAAGCACAGAGCCGTTGTTCGCATACAGTGTGCTCACCCTaGGCTTATCTGACAAAGAGTCCTGGATGCGTAGTACTTCTGACC | + |
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Preference number: 1 (lower is better) Translates to: CPEAQSRCSHTVCSP*AYLTKSPGCVVLLT Trigger: GGTCAGAAGTACTACGCATCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCACACTGTATGCGAACAACGGCTCTGTGCTTCAGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR GCA 90 bp | CCATCAGAAAGATTCTTCCTGGTTTGTCCGGTGCAAACGCTGGCATaGCCGGATATTTTAATCCCGAGCATGCAGCTGACCATGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: PSERFFLVCPVQTLA*PDILIPSMQLTMGS Trigger: GCTTCCCATGGTCAGCTGCATGCTCGGGATTAAAATATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR GCA 90 bp | CTCAGGGTTATAGATCAACAGCTTCATGGGGTTAGGGTGGCAGCCTaGCAAAATATCTCCCGTGGCTGGATCAACGGTCAAGTTATCCAC | + |
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Preference number: 1 (lower is better) Translates to: LRVIDQQLHGVRVAA*QNISRGWINGQVIH Trigger: GTGGATAACTTGACCGTTGATCCAGCCACGGGAGATATTTTGGCAGGCTGCCACCCTAACCCCATGAAGCTGTTGATCTATAACCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | CCAGATTGCAATTTGGCTTTTGTAGTTGACTGGTCTACCCAGAGGTaGCAAGAGCATGTAGGGGTCCATCTGGCATCTTGGGCTGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PDCNLAFVVDWSTQR*QEHVGVHLASWAGN Trigger: GTTTCCAGCCCAAGATGCCAGATGGACCCCTACATGCTCTTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAATTGCAATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR GCA 90 bp | GCCAGAGTTAGGCATGCCTGTGGTGCTCTAATTAGGCCTCCAGATTaGAATTTGGCTTTTGTAGTTGACTGGTCTACCCAGAGGTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ARVRHACGALIRPPD*NLAFVVDWSTQRWQ Trigger: TTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAATTGCAATCTGGAGGCCTAATTAGAGCACCACAGGCATGCCTAACTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR GCA 90 bp | TGGTCAAGCCCACCACTGATTTCCAGTGCTTGCGCCTCTGGGTTTTaGTCATTCAGATCCATCAGAAAGATTCTTCCTGGTTTGTCCGGT | + |
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Preference number: 1 (lower is better) Translates to: WSSPPLISSACASGF*SFRSIRKILPGLSG Trigger: ACCGGACAAACCAGGAAGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | GCTCTAATTAGGCCTCCAGATTGCAATTTGGCTTTTGTAGTTGACTaGTCTACCCAGAGGTGGCAAGAGCATGTAGGGGTCCATCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ALIRPPDCNLAFVVD*STQRWQEHVGVHLA Trigger: TGCCAGATGGACCCCTACATGCTCTTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAATTGCAATCTGGAGGCCTAATTAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | TCCGTTGGCAGAACTGAATCCTTGGGCCACAACTTTGACCTCTTTTaGGCTGTAGAAAACGACGGAAGTCCAGTGAGGGTCCAAGATCAT | + |
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Preference number: 1 (lower is better) Translates to: SVGRTESLGHNFDLF*AVENDGSPVRVQDH Trigger: ATGATCTTGGACCCTCACTGGACTTCCGTCGTTTTCTACAGCCCAAAAGAGGTCAAAGTTGTGGCCCAAGGATTCAGTTCTGCCAACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR GCA 90 bp | GGATTTAGTGACTCCTGGTCAAGCCCACCACTGATTTCCAGTGCTTaGGCCTCTGGGTTTTGCTCATTCAGATCCATCAGAAAGATTCTT | + |
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Preference number: 1 (lower is better) Translates to: GFSDSWSSPPLISSA*ASGFCSFRSIRKIL Trigger: AAGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTTGACCAGGAGTCACTAAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | AATGTAAGCCGATACAGCCTACGCATCACAGAGTATACAGGGTGTTaGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: NVSRYSLRITEYTGC*AHTVKDTWVSGCHS Trigger: TGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACACCCTGTATACTCTGTGATGCGTAGGCTGTATCGGCTTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR CCA 90 bp | GTATACAGGGTGTTGGGCACATACAGTAAAGGACACATGGGTATCTaGTTGCCACTCACTAACTTGATTCTTGATTTCATGGATATACGT | + |
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Preference number: 1 (lower is better) Translates to: VYRVLGTYSKGHMGI*LPLTNLILDFMDIR Trigger: ACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACACCCTGTATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR TCA 90 bp | TGTTCAAGAAAGGCTTTAGAGTTTAAAGATGAGAGTCAGGATCTGTaGCTGGAAGATGGTACCATATACGAGACAGACAGAGAATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: CSRKALEFKDESQDL*LEDGTIYETDREWE Trigger: TTCCCATTCTCTGTCTGTCTCGTATATGGTACCATCTTCCAGTCACAGATCCTGACTCTCATCTTTAAACTCTAAAGCCTTTCTTGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR TCA 90 bp | CATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACTTaGTTCTTGATTTCATGGATATACGTTTCTATACTCCTTTACTTT | + |
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Preference number: 1 (lower is better) Translates to: HTVKDTWVSGCHSLT*FLISWIYVSILLYF Trigger: AAAGTAAAGGAGTATAGAAACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAGCCACGGTGCTGCCCTGAAGCACAGAGCCGTTGTTCGCATACAGTGGTTAGGGTGGCAGCCTaGCAAAATATCTCCCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TQKPRCCPEAQSRCSHTVVRVAA*QNISRG Trigger: GCCACGGGAGATATTTTGGCAGGCTGCCACCCTAAC...CACTGTATGCGAACAACGGCTCTGTGCTTCAGGGCAGCACCGTGGCTTCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTTACACGAGCATAGCATaGACCAAGCTAGCTGATGCG | + |
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Preference number: 2 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVYTSIA*TKLADA Trigger: CGCATCAGCTAGCTTGGTGCATGCTATGCTCGTGTA...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTTTCATGGGGTTAGGGTaGCAGCCTGCCAAAATATCT | + |
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Preference number: 2 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVFMGLG*QPAKIS Trigger: AGATATTTTGGCAGGCTGCCACCCTAACCCCATGAA...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CAA 90 bp | CTGGTCAAGCCCACCACTGATTTCCAGTGCTTGCGCCTCTGGGTTTaGCTCATTCAGATCCATCAGAAAGATTCTTCCTGGTTTGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: LVKPTTDFQCLRLWV*LIQIHQKDSSWFVR Trigger: CCGGACAAACCAGGAAGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTCAGTGGAGTCCATGTTaGGGTGATTCACGACATAAA | + |
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Preference number: 2 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVQWSPC*GDSRHK Trigger: TTTATGTCGTGAATCACCCCAACATGGACTCCACTG...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTGAGCACAAATTCAAGTaGATGGGAAATGTAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVEHKFK*MGNVSR Trigger: TCGGCTTACATTTCCCATTCACTTGAATTTGTGCTC...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCACCACTGATTTCCAGTGCTTGCGCCTCTGGGTTTTGCTCATTCAGATCCAGAAAGATTCTTCCTaGTTTGTCCGGTGCAAACGC | + |
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Preference number: 2 (lower is better) Translates to: KPTTDFQCLRLWVLLIQIQKDSS*FVRCKR Trigger: GCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTG...GATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGACACATGGGTATCTaGTTGCCACTCACTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: LAIRFFTLWTAEASDYHSGHMGI*LPLTNL Trigger: CAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCC...GCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR CAA 90 bp | AAATGTAAGCCGATACAGCCTACGCATCACAGAGTATACAGGGTGTaGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: KCKPIQPTHHRVYRV*GTYSKGHMGIWLPL Trigger: GAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACACCCTGTATACTCTGTGATGCGTAGGCTGTATCGGCTTACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR CAA 90 bp | TCTGGGTTTTGCTCATTCAGATCCATCAGAAAGATTCTTCCTGGTTaGTCCGGTGCAAACGCTGGCATGCCCGGATATTTTAATCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: SGFCSFRSIRKILPG*SGANAGMPGYFNPE Trigger: CTCGGGATTAAAATATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACTTTGGCTTTTGTAGTTaGCTGGTCTACCCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VLGTYSKGHMGIWLPLTNFGFCS*LVYPEV Trigger: CACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAA...GTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTTGTCATTCACACTCTTaGGAAGTTCATGTTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVCHSHS*EVHVLE Trigger: CTCTAAAACATGAACTTCTCAAGAGTGTGAATGACA...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGAGCACAAATTCAAGTaGATGGGAAATGTAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: LAIRFFTLWTAEASDYHSEHKFK*MGNVSR Trigger: TCGGCTTACATTTCCCATTCACTTGAATTTGTGCTC...GCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | GTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTAGAGAGTCAGGATCTGTaGCTGGAAGATGGTACCATA | + |
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Preference number: 2 (lower is better) Translates to: VIVSHSLLHSVDCRSLRLESQDL*LEDGTI Trigger: TATGGTACCATCTTCCAGTCACAGATCCTGACTCTC...TAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | ATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATTCACTTGGGCCACAACTTTaGCCTCTTTTGGGCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: ITAVGGGFSEHLTRSTNSLGPQL*PLLGCR Trigger: TCTACAGCCCAAAAGAGGTCAAAGTTGTGGCCCAAG...TGAATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTGACTGGAAGATGGTACCATATACGAGACAGACAGAGAATGGGAATCGTCTGATTTCCAGTGCTTaGGCCTCTGGGTTTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ICDWKMVPYTRQTENGNRLISSA*ASGFCS Trigger: TGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAG...ACGATTCCCATTCTCTGTCTGTCTCGTATATGGTACCATCTTCCAGTCACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATCGTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCACAGTAAAGGACACATaGGTATCTGGTTGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: GIVIVSHSLLHSVDCRSLTVKDT*VSGCHS Trigger: TGAGTGGCAACCAGATACCCATGTGTCCTTTACTGT...GAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTACGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTTCTCATACACTCAGAGCCAAGATTGGTGACATAATGGAAATATTGGTATGTTCGCATACAGTGTaGTCACCCTGGGCTTATCTG | + |
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Preference number: 2 (lower is better) Translates to: GPSHTLRAKIGDIMEILVCSHTV*SPWAYL Trigger: CAGATAAGCCCAGGGTGAGCACACTGTATGCGAACA...TACCAATATTTCCATTATGTCACCAATCTTGGCTCTGAGTGTATGAGAAGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATGCTTTTGTAGTTGACTaGTCTACCCAGAGGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: TITAVGGGFSEHLTRSTNAFVVD*STQRWQ Trigger: TTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGC...ATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCTCATACACTCAGAGCCAAGATTGGTGACATAATGGAAATATTGGTAGGACACATGGGTATCTaGTTGCCACTCACTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: GPSHTLRAKIGDIMEILVGHMGI*LPLTNL Trigger: CAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCC...TACCAATATTTCCATTATGTCACCAATCTTGGCTCTGAGTGTATGAGAAGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTTGTTGTTCTTCAAACTTAAATATCTCCACAGTGGAGTCCATGTTGGGGTGGAGTATACAGGGTGTTaGGCACATACAGTAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: ALLFFKLKYLHSGVHVGVEYTGC*AHTVKD Trigger: GTCCTTTACTGTATGTGCCCAACACCCTGTATACTC...CACCCCAACATGGACTCCACTGTGGAGATATTTAAGTTTGAAGAACAACAACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAAAGCGCTTCTTCACTCTGTaGACTGCAGAAGCCTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: FSDFQNLAPCMANLCSRKRFFTL*TAEASD Trigger: GTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCG...CTTTCTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTTCTCATACACTCAGAGCCAAGATTGGTGACATAATGGAAATATTGGTAATGCACCAAGCTAGCTaGTGCGGTTTTTCAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: GPSHTLRAKIGDIMEILVMHQAS*CGFSDF Trigger: GAAATCTGAAAAACCGCATCAGCTAGCTTGGTGCAT...TACCAATATTTCCATTATGTCACCAATCTTGGCTCTGAGTGTATGAGAAGGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR CAA 90 bp | TACAGGGTGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTaGCCACTCACTAACTTGATTCTTGATTTCATGGATATACGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YRVLGTYSKGHMGIW*PLTNLILDFMDIRF Trigger: GAAACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACACCCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | GTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTAATTAGGCCTCCAGATTaGAATTTGGCTTTTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: VIVSHSLLHSVDCRSLRLIRPPD*NLAFVV Trigger: AACTACAAAAGCCAAATTGCAATCTGGAGGCCTAAT...TAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAAACTTCACTCTGTGGACTaGAGAAGCCTCAGACTATCA | + |
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Preference number: 2 (lower is better) Translates to: FFRFPESCSLYGKSVFKKLHSVD*RSLRLS Trigger: TGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG...TTTCTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAAAGGAGTATACAGGGTGTTaGGCACATACAGTAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: FSDFQNLAPCMANLCSRKEYTGC*AHTVKD Trigger: GTCCTTTACTGTATGTGCCCAACACCCTGTATACTC...CTTTCTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAAAGGTCCATCTGGCATCTTaGGCTGGAAACTTTAATGCA | + |
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Preference number: 2 (lower is better) Translates to: FSDFQNLAPCMANLCSRKVHLAS*AGNFNA Trigger: TGCATTAAAGTTTCCAGCCCAAGATGCCAGATGGAC...CTTTCTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTGGTTCCCATCAGCTGGAGGCTGCTTACTAAGTGTTTATTAACTAGTAGACAGTACAGAGCTTTGTaGAATATAGTACCTATGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLVPISWRLLTKCLLTSRQYRAL*NIVPMS Trigger: GCTCATAGGTACTATATTTCACAAAGCTCTGTACTG...TCTACTAGTTAATAAACACTTAGTAAGCAGCCTCCAGCTGATGGGAACCAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
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| 3UTR CAA 90 bp | ACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACTaGATTCTTGATTTCATGGATATACGTTTCTATACTCCTTTACTT | + |
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Preference number: 2 (lower is better) Translates to: TYSKGHMGIWLPLTN*ILDFMDIRFYTPLL Trigger: AAGTAAAGGAGTATAGAAACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| 3UTR-3UTR TCA 90 bp | TGTATGGCAAATCTGTGTTCAAGAAAGGCTTTAGAGTTTAAAGATGAGAGTCAGTGCCACTCACTAACTTaGTTCTTGATTTCATGGATA | + |
|
Preference number: 2 (lower is better) Translates to: CMANLCSRKALEFKDESQCHSLT*FLISWI Trigger: TATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCA...CTGACTCTCATCTTTAAACTCTAAAGCCTTTCTTGAACACAGATTTGCCATACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| 3UTR GCA 72 bp | TGCTCACCCTGGGCTTATCTGACAAAGAGTCCTGGATaGGTAGTACTTCTGACCCTGGAGGATCCTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSPWAYLTKSPG*VVLLTLEDPQG Trigger: ACCCTGAGGATCCTCCAGGGTCAGAAGTACTACGCATCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR GCA 72 bp | TGCCCTGAAGCACAGAGCCGTTGTTCGCATACAGTGTaGTCACCCTGGGCTTATCTGACAAAGAGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPEAQSRCSHTV*SPWAYLTKSPG Trigger: TCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCACACTGTATGCGAACAACGGCTCTGTGCTTCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR GCA 72 bp | AGATTCTTCCTGGTTTGTCCGGTGCAAACGCTGGCATaGCCGGATATTTTAATCCCGAGCATGCAGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RFFLVCPVQTLA*PDILIPSMQLT Trigger: GGTCAGCTGCATGCTCGGGATTAAAATATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR GCA 72 bp | GACTCCTGGTCAAGCCCACCACTGATTTCCAGTGCTTaGGCCTCTGGGTTTTGCTCATTCAGATCCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSWSSPPLISSA*ASGFCSFRSIR Trigger: TCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTTGACCAGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | AGGTGGCAAGAGCATGTAGGGGTCCATCTGGCATCTTaGGCTGGAAACTTTAATGCACGGCCTCTACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RWQEHVGVHLAS*AGNFNARPLQL Trigger: TAGCTGTAGAGGCCGTGCATTAAAGTTTCCAGCCCAAGATGCCAGATGGACCCCTACATGCTCTTGCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | AGTGTGCTCACCCTGGGCTTATCTGACAAAGAGTCCTaGATGCGTAGTACTTCTGACCCTGGAGGATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLTLGLSDKES*MRSTSDPGGSS Trigger: TGAGGATCCTCCAGGGTCAGAAGTACTACGCATCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | GCACAGAGCCGTTGTTCGCATACAGTGTGCTCACCCTaGGCTTATCTGACAAAGAGTCCTGGATGCGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQSRCSHTVCSP*AYLTKSPGCVV Trigger: TACTACGCATCCAGGACTCTTTGTCAGATAAGCCCAGGGTGAGCACACTGTATGCGAACAACGGCTCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | AGGCCTCCAGATTGCAATTTGGCTTTTGTAGTTGACTaGTCTACCCAGAGGTGGCAAGAGCATGTAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RPPDCNLAFVVD*STQRWQEHVGV Trigger: GACCCCTACATGCTCTTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAATTGCAATCTGGAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGAGAGTATACAGGGTGTaGGGCACATACAGTAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSLLHSVDCRSLRLSQRSRVYRV*GTYSKG Trigger: TCCTTTACTGTATGTGCCCAACACCCTGTATACTCT...CGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | AATTTGGCTTTTGTAGTTGACTGGTCTACCCAGAGGTaGCAAGAGCATGTAGGGGTCCATCTGGCATCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NLAFVVDWSTQR*QEHVGVHLASW Trigger: CCAAGATGCCAGATGGACCCCTACATGCTCTTGCCACCTCTGGGTAGACCAGTCAACTACAAAAGCCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | AGAACTGAATCCTTGGGCCACAACTTTGACCTCTTTTaGGCTGTAGAAAACGACGGAAGTCCAGTGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RTESLGHNFDLF*AVENDGSPVRV Trigger: GACCCTCACTGGACTTCCGTCGTTTTCTACAGCCCAAAAGAGGTCAAAGTTGTGGCCCAAGGATTCAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR GCA 72 bp | AGGCATGCCTGTGGTGCTCTAATTAGGCCTCCAGATTaGAATTTGGCTTTTGTAGTTGACTGGTCTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RHACGALIRPPD*NLAFVVDWSTQ Trigger: CTGGGTAGACCAGTCAACTACAAAAGCCAAATTGCAATCTGGAGGCCTAATTAGAGCACCACAGGCATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | GTTTTGCTCATTCAGATCCATCAGAAAGATTCTTCCTaGTTTGTCCGGTGCAAACGCTGGCATGCCCGGATA | + |
|
Preference number: 3 (lower is better) Translates to: VLLIQIHQKDSS*FVRCKRWHARI Trigger: TATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTGATGGATCTGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | GTCAAGCCCACCACTGATTTCCAGTGCTTGCGCCTCTaGGTTTTGCTCATTCAGATCCATCAGAAAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: VKPTTDFQCLRL*VLLIQIHQKDS Trigger: AGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGTGGGCTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTGACTGGAAGATGGTACCATATACGAGACAGACAGAGAATGGGAATCGTTTGCGCCTCTGGGTTTaGCTCATTCAGATCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: ICDWKMVPYTRQTENGNRLRLWV*LIQIHQ Trigger: CTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAA...ACGATTCCCATTCTCTGTCTGTCTCGTATATGGTACCATCTTCCAGTCACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR TCA 72 bp | AAAGAAGTACACGAGCATAGCATGCACCAAGCTAGCTaGTGCGGTTTTTCAGATTTCCAGAATCTTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEVHEHSMHQAS*CGFSDFQNLAP Trigger: GGGAGCAAGATTCTGGAAATCTGAAAAACCGCATCAGCTAGCTTGGTGCATGCTATGCTCGTGTACTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTCCTGGTTTGTCCGGTGCAAACGCTGGCATGCCCGGATATTTTAATCCCTTGCCACTCACTAACTaGATTCTTGATTTCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ILPGLSGANAGMPGYFNPLPLTN*ILDFMD Trigger: ATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAA...GGGATTAAAATATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| 3UTR CCA 72 bp | GTGTTGGGCACATACAGTAAAGGACACATGGGTATCTaGTTGCCACTCACTAACTTGATTCTTGATTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: VLGTYSKGHMGI*LPLTNLILDFM Trigger: CATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTTCTCATACACTCAGAGCCAAGATTGGTGACATAATGGAAATATTGGTATTGCCACTCACTAACTaGATTCTTGATTTCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GPSHTLRAKIGDIMEILVLPLTN*ILDFMD Trigger: ATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAA...TACCAATATTTCCATTATGTCACCAATCTTGGCTCTGAGTGTATGAGAAGGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| 3UTR TCA 72 bp | AAGGACACATGGGTATCTGGTTGCCACTCACTAACTTaGTTCTTGATTTCATGGATATACGTTTCTATACTC | + |
|
Preference number: 3 (lower is better) Translates to: KDTWVSGCHSLT*FLISWIYVSIL Trigger: GAGTATAGAAACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTGTTAGGGTGGCAGCCTaGCAAAATATCTCCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVVRVAA*QNISRG Trigger: GCCACGGGAGATATTTTGGCAGGCTGCCACCCTAAC...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACCAGAAGCCACGGTGCTaGCCTGAAGCACAGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYSKGHMGIWLPLTNQKPRC*PEAQSR Trigger: ACGGCTCTGTGCTTCAGGGCAGCACCGTGGCTTCTG...GTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | CATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGTGTTCGCATACAGTGTaGTCACCCTGGGCTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSLLHSVDCRSLRLSQRSCSHTV*SPWAYL Trigger: CAGATAAGCCCAGGGTGAGCACACTGTATGCGAACA...CGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | CTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGAGGTGGTTGGATTTAGTGACTCCTaGTCAAGCCCACCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LHSVDCRSLRLSQRSEVVGFSDS*SSPPLI Trigger: AATCAGTGGTGGGCTTGACCAGGAGTCACTAAATCC...AACCACCTCCGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | CATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGGCATAGAACTGCTCTaGCCCAAGAACCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLLHSVDCRSLRLSQRSGIELL*PKNHNV Trigger: GACATTGTGGTTCTTGGGCCAGAGCAGTTCTATGCC...CGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACTACACAGAAGCCACGGTaGTGCCCTGAAGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CWAHTVKDTWVSGCHSLTTQKPR*CPEAQS Trigger: GCTCTGTGCTTCAGGGCAGCACCGTGGCTTCTGTGT...AGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| 3UTR CAA 72 bp | CCGATACAGCCTACGCATCACAGAGTATACAGGGTGTaGGGCACATACAGTAAAGGACACATGGGTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIQPTHHRVYRV*GTYSKGHMGIW Trigger: CCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACACCCTGTATACTCTGTGATGCGTAGGCTGTATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACCTTGGGCCACAACTTTaGCCTCTTTTGGGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYSKGHMGIWLPLTNLGPQL*PLLGCR Trigger: TCTACAGCCCAAAAGAGGTCAAAGTTGTGGCCCAAG...GTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | TTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCAGTAATGGTCTCTTGTaGCATAGAACTGCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAIRFFTLWTAEASDYHSSNGLL*HRTALA Trigger: GGCCAGAGCAGTTCTATGCCACAAGAGACCATTACT...GCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | TTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCTTCATGGGGTTAGGGTaGCAGCCTGCCAAAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAIRFFTLWTAEASDYHSFMGLG*QPAKIS Trigger: AGATATTTTGGCAGGCTGCCACCCTAACCCCATGAA...GCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACATGCGCCTCTGGGTTTTaGTCATTCAGATCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTITAVGGGFSEHLTRSTCASGF*SFRSIR Trigger: TCTGATGGATCTGAATGAGCAAAACCCAGAGGCGCA...TGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGATAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | GTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTACTGATTTCCAGTGCTTaGGCCTCTGGGTTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVSHSLLHSVDCRSLRLLISSA*ASGFCS Trigger: TGAGCAAAACCCAGAGGCGCAAGCACTGGAAATCAG...TAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGACTATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCCAGGTGGCAGTTTTGTaGTTCTGTGGCCTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQTITAVGGGFSEHLTRSQVAVL*FCGLYF Trigger: GAAATAAAGGCCACAGAACCACAAAACTGCCACCTG...GCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGATAGTCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGCACATACAGTAAAGGACACATGGGTATCTGGTTGCCACTCACTAACTCAGTGCTTGCGCCTCTaGGTTTTGCTCATTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CWAHTVKDTWVSGCHSLTQCLRL*VLLIQI Trigger: GATCTGAATGAGCAAAACCCAGAGGCGCAAGCACTG...AGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | GGAATCGTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCACAGTGTGCTCACCCTaGGCTTATCTGACAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIVIVSHSLLHSVDCRSLTVCSP*AYLTKS Trigger: ACTCTTTGTCAGATAAGCCCAGGGTGAGCACACTGT...GAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTACGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCTTCTCATACACTCAGAGCCAAGATTGGTGACATAATGGAAATATTGGTAACCACTGATTTCCAGTaGTTGCGCCTCTGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPSHTLRAKIGDIMEILVTTDFQ*LRLWVL Trigger: CAAAACCCAGAGGCGCAAGCACTGGAAATCAGTGGT...TACCAATATTTCCATTATGTCACCAATCTTGGCTCTGAGTGTATGAGAAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | ACTATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATCAGAAAGATTCTTCCTaGTTTGTCCGGTGCAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: TITAVGGGFSEHLTRSTNQKDSS*FVRCKR Trigger: GCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTG...ATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR TCA 90 bp | TTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCTGTCATTCACACTCTTaGGAAGTTCATGTTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIRFFTLWTAEASDYHSCHSHS*EVHVLE Trigger: CTCTAAAACATGAACTTCTCAAGAGTGTGAATGACA...GCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR TCA 90 bp | ACTATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATAGGTTCCCAGCTGAATaGCCTTCACTGGAGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TITAVGGGFSEHLTRSTNRFPAE*PSLELN Trigger: ATTTAACTCCAGTGAAGGTCATTCAGCTGGGAACCT...ATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | CGACGGAAGTCCAGTGAGGGTCCAAGATCATCTCCAGAAGTACCAAGAAATAACAGTTTTGTGGTTCTGTaGCCTTTATTTCTCGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKSSEGPRSSPEVPRNNSFVVL*PLFLEL Trigger: CAACTCGAGAAATAAAGGCCACAGAACCACAAAACT...GTTATTTCTTGGTACTTCTGGAGATGATCTTGGACCCTCACTGGACTTCCGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129344.8 |
||
| CDS-3UTR CCA 90 bp | ATCACAGCGGTCGGAGGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATTCATCTGACAAAGAGTCCTaGATGCGTAGTACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITAVGGGFSEHLTRSTNSSDKES*MRSTSD Trigger: GTCAGAAGTACTACGCATCCAGGACTCTTTGTCAGA...TGAATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACCTCCGACCGCTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR TCA 90 bp | GACTGGAAGATGGTACCATATACGAGACAGACAGAGAATGGGAATCGTAATAGTGAGTTTTCAGGTGGATaGGAGAGCGTTGTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DWKMVPYTRQTENGNRNSEFSGG*ESVVVL Trigger: AAGAACAACAACGCTCTCTCATCCACCTGAAAACTC...ACTATTACGATTCCCATTCTCTGTCTGTCTCGTATATGGTACCATCTTCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | GTAATAGTTAGCCATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTAAGTTTTGTGGTTCTGTaGCCTTTATTTCTCGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIVSHSLLHSVDCRSLRLSFVVL*PLFLEL Trigger: CAACTCGAGAAATAAAGGCCACAGAACCACAAAACT...TAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATGGCTAACTATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR CCA 90 bp | CGGTTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGCAGGTGGCAGTTTTGTaGTTCTGTGGCCTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFFRFPESCSLYGKSVFKQVAVL*FCGLYF Trigger: GAAATAAAGGCCACAGAACCACAAAACTGCCACCTG...CTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAACCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATTCAAGTGAATGGGAAATGAGGCCCTCAATCAGGTaGCAGTTTTGTGGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGFSEHLTRSTNSSEWEMRPSIR*QFCGSV Trigger: CACAGAACCACAAAACTGCCACCTGATTGAGGGCCT...CATTTCCCATTCACTTGAATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGAAGATGGTACCATATACGAGACAGACAGAGAATGGGAATCGTAATAGTCAGTGGAGTCCATGTTaGGGTGATTCACGACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: DWKMVPYTRQTENGNRNSQWSPC*GDSRHK Trigger: TTTATGTCGTGAATCACCCCAACATGGACTCCACTG...ACTATTACGATTCCCATTCTCTGTCTGTCTCGTATATGGTACCATCTTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
||
| CDS-3UTR CCA 90 bp | CGGTTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAACTTTGACCTCTTTTaGGCTGTAGAAAACGACGGA | + |
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Preference number: 4 (lower is better) Translates to: RFFRFPESCSLYGKSVFKNFDLF*AVENDG Trigger: TCCGTCGTTTTCTACAGCCCAAAAGAGGTCAAAGTT...CTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAACCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| 3UTR CAA 72 bp | TTGGGCACATACAGTAAAGGACACATGGGTATCTGGTaGCCACTCACTAACTTGATTCTTGATTTCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: LGTYSKGHMGIW*PLTNLILDFMD Trigger: ATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTTACTGTATGTGCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| CDS-3UTR TCA 90 bp | CGGTTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGCAGTACAGAGCTTTGTaGAATATAGTACCTATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RFFRFPESCSLYGKSVFKQYRAL*NIVPMS Trigger: GCTCATAGGTACTATATTTCACAAAGCTCTGTACTG...CTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAACCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| CDS-3UTR CCA 90 bp | TTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAAGAAATTTAGAGTTTTCAGGTaGATGAGAGAGCGTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FFRFPESCSLYGKSVFKKFRVFR*MRERCC Trigger: ACAACAACGCTCTCTCATCCACCTGAAAACTCTAAA...TTTCTTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| 3UTR CAA 72 bp | AAAGGACACATGGGTATCTGGTTGCCACTCACTAACTaGATTCTTGATTTCATGGATATACGTTTCTATACT | + |
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Preference number: 4 (lower is better) Translates to: KGHMGIWLPLTN*ILDFMDIRFYT Trigger: AGTATAGAAACGTATATCCATGAAATCAAGAATCAAGTTAGTGAGTGGCAACCAGATACCCATGTGTCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| CDS-3UTR CAA 90 bp | CATTCGCTTCTTCACTCTGTGGACTGCAGAAGCCTCAGACTATCACAGCGGTCGGTGGATGAGAGAGCGTaGTTGTTCTTCAAACTTAAA | + |
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Preference number: 5 (lower is better) Translates to: HSLLHSVDCRSLRLSQRSVDERA*LFFKLK Trigger: TTTAAGTTTGAAGAACAACAACGCTCTCTCATCCAC...CGACCGCTGTGATAGTCTGAGGCTTCTGCAGTCCACAGAGTGAAGAAGCGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| CDS CCA 90 bp | ATCTTCAGAGCCATTCTCGAGGCCCTCAATCAGGTGGCAGTTTTGTaGTTCTGTGGCCTTTATTTCTCGAGTTGTACTAACTCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: IFRAILEALNQVAVL*FCGLYFSSCTNSFS Trigger: AGAGAACGAGTTAGTACAACTCGAGAAATAAAGGCCACAGAACCACAAAACTGCCACCTGATTGAGGGCCTCGAGAATGGCTCTGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| CDS-3UTR CAA 90 bp | GCGGTTTTTCAGATTTCCAGAATCTTGCTCCCTGTATGGCAAATCTGTGTTCAATTGCGCCTCTGGGTTTaGCTCATTCAGATCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: AVFQISRILLPVWQICVQLRLWV*LIQIHQ Trigger: CTGATGGATCTGAATGAGCAAAACCCAGAGGCGCAA...TTGAACACAGATTTGCCATACAGGGAGCAAGATTCTGGAAATCTGAAAAACCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| CDS-3UTR CAA 90 bp | GGTGGTTTTAGTGAACACTTAACAAGGAGCACAAATTCAAGTGAATGGGAAATGGGCAGAACTGAATCCTaGGGCCACAACTTTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: GGFSEHLTRSTNSSEWEMGRTES*GHNFDL Trigger: GAGGTCAAAGTTGTGGCCCAAGGATTCAGTTCTGCC...CATTTCCCATTCACTTGAATTTGTGCTCCTTGTTAAGTGTTCACTAAAACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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| CDS CCA 90 bp | AGTATATCAATATCTTCAGAGCCATTCTCGAGGCCCTCAATCAGGTaGCAGTTTTGTGGTTCTGTGGCCTTTATTTCTCGAGTTGTACTA | + |
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Preference number: 5 (lower is better) Translates to: SISISSEPFSRPSIR*QFCGSVAFISRVVL Trigger: TAGTACAACTCGAGAAATAAAGGCCACAGAACCACAAAACTGCCACCTGATTGAGGGCCTCGAGAATGGCTCTGAAGATATTGATATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| CDS CAA 72 bp | AGAGCCATTCTCGAGGCCCTCAATCAGGTGGCAGTTTaGTGGTTCTGTGGCCTTTATTTCTCGAGTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: RAILEALNQVAV*WFCGLYFSSCT Trigger: AGTACAACTCGAGAAATAAAGGCCACAGAACCACAAAACTGCCACCTGATTGAGGGCCTCGAGAATGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031773.9 ENSMUST00000129344.8 |
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| CDS CAA 90 bp | TCTGGGTTTTGCTCATTCAGATCCATCAGAAAGATTCTTCCTGGTTaGTCCGGTGCAAACGCTGGCATGCCCGGATATTTTAATCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SGFCSFRSIRKILPG*SGANAGMPGYFNPV Trigger: CACTGGATTAAAATATCCGGGCATGCCAGCGTTTGCACCGGACAAACCAGGAAGAATCTTTCTGATGGATCTGAATGAGCAAAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031773.9 |
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