Pregenerated sensors for PON2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032667Ensembl transcript IDs: ENSMUST00000057792.9
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGTCTTACTGTAGTGGCTGCAAATCAGACAGGTCTAGACATCTaGCCACTTCTGGACATAATTCTATTCACTGAGCAGGTAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: PCLTVVAANQTGLDI*PLLDIILFTEQVRS Trigger: ACTTCTTACCTGCTCAGTGAATAGAATTATGTCCAGAAGTGGTCAGATGTCTAGACCTGTCTGATTTGCAGCCACTACAGTAAGACAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR CCA 90 bp | TATTTAGGAACAGAACCTATGAAAGATACCTTAAGAGCTGAACACTaGAAGGCTGACTGTGACATAGGTAGGGAGGCCTCTGTGGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: YLGTEPMKDTLRAEH*KADCDIGREASVVR Trigger: TCTAACCACAGAGGCCTCCCTACCTATGTCACAGTCAGCCTTCCAGTGTTCAGCTCTTAAGGTATCTTTCATAGGTTCTGTTCCTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR TCA 90 bp | AGAGGATTTCCCTTGGGAATTAAACACAAACAACTCCCCGGATTTTaGTTAGTCTTGAATACACTCCTACCTTGTAAATCAGTAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: RGFPLGIKHKQLPGF*LVLNTLLPCKSVNK Trigger: TTTGTTTACTGATTTACAAGGTAGGAGTGTATTCAAGACTAATCAAAATCCGGGGAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGCTGACTGTGACATAGGTAGGGAGGCCTCTGTGGTTAGAGCAAGTTCCCAACTCCCCGGATTTTaGTTAGTCTTGAATACACTC | + |
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Preference number: 2 (lower is better) Translates to: WKADCDIGREASVVRASSQLPGF*LVLNTL Trigger: GAGTGTATTCAAGACTAATCAAAATCCGGGGAGTTG...GGAACTTGCTCTAACCACAGAGGCCTCCCTACCTATGTCACAGTCAGCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGCTGACTGTGACATAGGTAGGGAGGCCTCTGTGGTTAGAGCAAGTTCCAAGGAGCTACAAATGTaGTATATTACTAGGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: WKADCDIGREASVVRASSKELQM*YITRSV Trigger: TACTGACCTAGTAATATACCACATTTGTAGCTCCTT...GGAACTTGCTCTAACCACAGAGGCCTCCCTACCTATGTCACAGTCAGCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCATTCACTTCATAGAAAAGCAGCTTTCTTCTTTCTCGCTGGATCAGCAGAATTACTAGGTCAGTACTaGTGGTTAAATTCCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LHSLHRKAAFFFLAGSAELLGQY*WLNSLR Trigger: TCTGAGGGAATTTAACCATCAGTACTGACCTAGTAA...TTCTGCTGATCCAGCGAGAAAGAAGAAAGCTGCTTTTCTATGAAGTGAATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR CCA 72 bp | TTACCACACTCCCTGCTTCAGTGGACTCTTACGTGGTaGAGGCACGGAGGGGGAAGCCCCTCTGTGCAAACT | + |
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Preference number: 3 (lower is better) Translates to: LPHSLLQWTLTW*RHGGGSPSVQT Trigger: AGTTTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACCACGTAAGAGTCCACTGAAGCAGGGAGTGTGGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR CCA 72 bp | TGTTTACCACACTCCCTGCTTCAGTGGACTCTTACGTaGTGGAGGCACGGAGGGGGAAGCCCCTCTGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: CLPHSLLQWTLT*WRHGGGSPSVQ Trigger: TTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACCACGTAAGAGTCCACTGAAGCAGGGAGTGTGGTAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR GCA 72 bp | GAAATTAACATGGCCATTGATTCCTGTCCAACCGAATaGCCTAGGAGTCACTTCCCGCCTCACCCTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: EINMAIDSCPTE*PRSHFPPHPLQ Trigger: CTGGAGAGGGTGAGGCGGGAAGTGACTCCTAGGGCATTCGGTTGGACAGGAATCAATGGCCATGTTAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR TCA 72 bp | TTTTCCAATAAAGAGCCCCTTTACATAGAGCTTTCATaGGAAATTAACATGGCCATTGATTCCTGTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: FSNKEPLYIELS*EINMAIDSCPT Trigger: GGTTGGACAGGAATCAATGGCCATGTTAATTTCTCATGAAAGCTCTATGTAAAGGGGCTCTTTATTGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR TCA 72 bp | AGCTCTAAGCCTTTATCGCCTCTTTGTGTCAAAAACTaGATTGTATTTAGGAACAGAACCTATGAAAGATAC | + |
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Preference number: 3 (lower is better) Translates to: SSKPLSPLCVKN*IVFRNRTYERY Trigger: GTATCTTTCATAGGTTCTGTTCCTAAATACAATTCAGTTTTTGACACAAAGAGGCGATAAAGGCTTAGAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR GCA 90 bp | AGTAGTCCTGCACAAGCCCAGCAGGCGCAGCCTGGAGACCGAGGCCGCAGACCTTCCAGGCTTATCCGGTaGAAAGCTGTGGAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPAQAQQAQPGDRGRRPSRLIR*KAVEPW Trigger: CCAGGGCTCCACAGCTTTGCACCGGATAAGCCTGGA...AGGTCTGCGGCCTCGGTCTCCAGGCTGCGCCTGCTGGGCTTGTGCAGGACTACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | CTTACGTGGTGGAGGCACGGAGGGGGAAGCCCCTCTGTGCAAACTGCATTCACTCTCTGTCCATTAGGGTaGCAGCCGACCCAGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: LTWWRHGGGSPSVQTAFTLCPLG*QPTQMS Trigger: CGACATCTGGGTCGGCTGTCACCCTAATGGACAGAG...AGTGAATGCAGTTTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACCACGTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | TGGAAGGCTGACTGTGACATAGGTAGGGAGGCCTCTGTGGTTAGAGCAAGTTCCGATCAAAGCCCCAGCTaGCTCTCAACTCCAGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: WKADCDIGREASVVRASSDQSPS*LSTPAP Trigger: GGGCGCTGGAGTTGAGAGTCAGCTGGGGCTTTGATC...GGAACTTGCTCTAACCACAGAGGCCTCCCTACCTATGTCACAGTCAGCCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | AGTAGTCCTGCACAAGCCCAGCAGGCGCAGCCTGGAGACCGAGGCCGCAGACCTATACTTTTTATCAGGTaGAATATTGATCCCGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSPAQAQQAQPGDRGRRPILFIR*NIDPVG Trigger: GCCAACGGGATCAATATTTCACCTGATAAAAAGTAT...AGGTCTGCGGCCTCGGTCTCCAGGCTGCGCCTGCTGGGCTTGTGCAGGACTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | GGTGGAGGCACGGAGGGGGAAGCCCCTCTGTGCAAACTGCATTCACTTCATAGATGGGCCCAACAGCTATaGTGTCATTCACACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GGGTEGEAPLCKLHSLHRWAQQL*CHSHLE Trigger: TTCCAAGTGTGAATGACATCATAGCTGTTGGGCCCA...TCTATGAAGTGAATGCAGTTTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | TTATCTATCAGTAGTCCTGCACAAGCCCAGCAGGCGCAGCCTGGAGACCGAGGCTATCAGGTGAAATATTaGTCCCGTTGGCGGAATCGA | + |
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Preference number: 4 (lower is better) Translates to: LSISSPAQAQQAQPGDRGYQVKY*SRWRNR Trigger: TCGATTCCGCCAACGGGATCAATATTTCACCTGATA...GCCTCGGTCTCCAGGCTGCGCCTGCTGGGCTTGTGCAGGACTACTGATAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | GGTGGAGGCACGGAGGGGGAAGCCCCTCTGTGCAAACTGCATTCACTTCATAGATCGGATAGAATGTTCTaGATGCGGAGGACCTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GGGTEGEAPLCKLHSLHRSDRMF*MRRTSD Trigger: ATCAGAGGTCCTCCGCATTCAGAACATTCTATCCGA...TCTATGAAGTGAATGCAGTTTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CCA 90 bp | CTTACGTGGTGGAGGCACGGAGGGGGAAGCCCCTCTGTGCAAACTGCATTCACTTGTACTCTTGAATTGTaGGTGGTTTACAACAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LTWWRHGGGSPSVQTAFTCTLEL*VVYNKE Trigger: CTCTTTGTTGTAAACCACCCACAATTCAAGAGTACA...AGTGAATGCAGTTTGCACAGAGGGGCTTCCCCCTCCGTGCCTCCACCACGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR GCA 90 bp | TCCCGCCTCACCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCATAGAATGTTCTGAATaGGGAGGACCTCTGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRLTLSRGFPLGIKHKQLIECSE*GGPLMQ Trigger: CTGCATCAGAGGTCCTCCGCATTCAGAACATTCTAT...GAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGGTGAGGCGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR GCA 90 bp | CCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCCCCGGATTTTGGAATCGAATCCTTCTaGCACCAGTTTAACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSPEDFPWELNTNNSPDFGIESF*HQFNFF Trigger: GAAGAAGTTAAACTGGTGGCAGAAGGATTCGATTCC...AAAATCCGGGGAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACAGCCAATAATATAGTTCATTTTCTTTTGATGAGTAGTGGTCATTGGTaGCGTAGAAGTGGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTANNIVHFLLMSSGHW*RRSGWA Trigger: GGCCCACCCACTTCTACGCCACCAATGACCACTACT...CATCAAAAGAAAATGAACTATATTATTGGCTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACAGCCAATAATATAGTTCATTTTCTTTTGATGGGAGGATGGTTCGGGTaGTACACGAAGAGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTANNIVHFLLMGGWFG*YTKSLC Trigger: ACAGAGGCTCTTCGTGTACCACCCGAACCATCCTCC...CATCAAAAGAAAATGAACTATATTATTGGCTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR CAA 72 bp | AATGTTCTTCAATGTTCTTCCAGTGATTTTGGCATCTaGACCCTGTCTTACTGTAGTGGCTGCAAATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NVLQCSSSDFGI*TLSYCSGCKSD Trigger: GTCTGATTTGCAGCCACTACAGTAAGACAGGGTCAAGATGCCAAAATCACTGGAAGAACATTGAAGAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR TCA 90 bp | CTGCATTCACTTCATAGAAAAGCAGCTTTCTTCTTTCTCGCTGGATCAGCAGAATTTCCACTGTACTCTTaGATTGTGGGTGGTTTACAA | + |
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Preference number: 4 (lower is better) Translates to: LHSLHRKAAFFFLAGSAEFPLYS*IVGGLQ Trigger: TTGTAAACCACCCACAATTCAAGAGTACAGTGGAAA...TTCTGCTGATCCAGCGAGAAAGAAGAAAGCTGCTTTTCTATGAAGTGAATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CCA 90 bp | ACACCAGCTCTAAGCCTTTATCGCCTCTTTGTGTCAAAAACTGAATTGTATTTAAGTGCTAATGCCATGTaGGTTAAACGAAGCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: TPALSLYRLFVSKTELYLSANAM*VKRSQI Trigger: GATCTGGCTTCGTTTAACCCACATGGCATTAGCACT...TAAATACAATTCAGTTTTTGACACAAAGAGGCGATAAAGGCTTAGAGCTGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| 3UTR CAA 72 bp | CTAAGCCTTTATCGCCTCTTTGTGTCAAAAACTGAATaGTATTTAGGAACAGAACCTATGAAAGATACCTTA | + |
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Preference number: 4 (lower is better) Translates to: LSLYRLFVSKTE*YLGTEPMKDTL Trigger: TAAGGTATCTTTCATAGGTTCTGTTCCTAAATACAATTCAGTTTTTGACACAAAGAGGCGATAAAGGCTTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 90 bp | GGAGGATGGTTCGGGTGGTACACGAAGAGCCTCTGTCCATTAGGGTaGCAGCCGACCCAGATGTCGCCCGAGGAAGGATCAATAGATAAA | + |
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Preference number: 5 (lower is better) Translates to: GGWFGWYTKSLCPLG*QPTQMSPEEGSIDK Trigger: TTTATCTATTGATCCTTCCTCGGGCGACATCTGGGTCGGCTGTCACCCTAATGGACAGAGGCTCTTCGTGTACCACCCGAACCATCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CCA 90 bp | AGATCCATCATCAGTATCCCTCCAGGCTTATCCGGTGCAAAGCTGTaGAGCCCTGGAAACTTGAGGCCCACGCTAAAGAAAGCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RSIISIPPGLSGAKL*SPGNLRPTLKKARP Trigger: TGGCCTGGCTTTCTTTAGCGTGGGCCTCAAGTTTCCAGGGCTCCACAGCTTTGCACCGGATAAGCCTGGAGGGATACTGATGATGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TTATCTATCAGTAGTCCTGCACAAGCCCAGCAGGCGCAGCCTGGAGACCGAGGCCACTGTACTCTTGAATaGTGGGTGGTTTACAACAAA | + |
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Preference number: 5 (lower is better) Translates to: LSISSPAQAQQAQPGDRGHCTLE*WVVYNK Trigger: TTTGTTGTAAACCACCCACAATTCAAGAGTACAGTG...GCCTCGGTCTCCAGGCTGCGCCTGCTGGGCTTGTGCAGGACTACTGATAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TGGAAGGCTGACTGTGACATAGGTAGGGAGGCCTCTGTGGTTAGAGCAAGTTCCGGATCAATAGATAAATaGTCCACCAGCGTGCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: WKADCDIGREASVVRASSGSIDK*STSVPN Trigger: GTTGGGCACGCTGGTGGACAATTTATCTATTGATCC...GGAACTTGCTCTAACCACAGAGGCCTCCCTACCTATGTCACAGTCAGCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 90 bp | TTGATATACACCGTTGTCACTGATGGCTTCTCGGATAGAATGTTCTaGATGCGGAGGACCTCTGATGCAGGAGGATGGTTCGGGTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: LIYTVVTDGFSDRMF*MRRTSDAGGWFGWY Trigger: GTACCACCCGAACCATCCTCCTGCATCAGAGGTCCTCCGCATTCAGAACATTCTATCCGAGAAGCCATCAGTGACAACGGTGTATATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TCCCGCCTCACCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCAGGACAGACCCGTTGTaGATATACACCGTTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: SRLTLSRGFPLGIKHKQLRTDPL*IYTVVT Trigger: AGTGACAACGGTGTATATCAACAACGGGTCTGTCCT...GAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGGTGAGGCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 90 bp | CATATATGGTCGCCACAGAACTTCCCTGGAGGACAGACCCGTTGTTaGTATACACCGTTGTCACTGATGGCTTCTCGGATAGAATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: HIWSPQNFPGGQTRC*YTPLSLMASRIECS Trigger: AGAACATTCTATCCGAGAAGCCATCAGTGACAACGGTGTATATCAACAACGGGTCTGTCCTCCAGGGAAGTTCTGTGGCGACCATATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TCCCGCCTCACCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCGAAATATTGATCCCGTaGGCGGAATCGAATCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SRLTLSRGFPLGIKHKQLEILIP*AESNPS Trigger: AGAAGGATTCGATTCCGCCAACGGGATCAATATTTC...GAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGGTGAGGCGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TCCCGCCTCACCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCATTTCCACTGTACTCTaGAATTGTGGGTGGTTTACA | + |
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Preference number: 5 (lower is better) Translates to: SRLTLSRGFPLGIKHKQLISTVL*NCGWFT Trigger: TGTAAACCACCCACAATTCAAGAGTACAGTGGAAAT...GAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGGTGAGGCGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | TCCCGCCTCACCCTCTCCAGAGGATTTCCCTTGGGAATTAAACACAAACAACTCTGTAGTAAACAACATTaGCCCAGTGTAGGTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: SRLTLSRGFPLGIKHKQLCSKQH*PSVGSS Trigger: ACTTGAACCTACACTGGGCAAATGTTGTTTACTACA...GAGTTGTTTGTGTTTAATTCCCAAGGGAAATCCTCTGGAGAGGGTGAGGCGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CCA 90 bp | GAGATAAACTGTATCATCGTCATCTATGAAAGTGCTAATGCCATGTaGGTTAAACGAAGCCAGATCAAAGCCCCAGCTGACTCTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: EINCIIVIYESANAM*VKRSQIKAPADSQL Trigger: GAGTTGAGAGTCAGCTGGGGCTTTGATCTGGCTTCGTTTAACCCACATGGCATTAGCACTTTCATAGATGACGATGATACAGTTTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACAGCCAATAATATAGTTCATTTTCTTTTGATGTTATCAGGTGAAATATaGATCCCGTTGGCGGAATCG | + |
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Preference number: 5 (lower is better) Translates to: HTHTHTHTANNIVHFLLMLSGEI*IPLAES Trigger: CGATTCCGCCAACGGGATCAATATTTCACCTGATAA...CATCAAAAGAAAATGAACTATATTATTGGCTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CCA 72 bp | CCCTCCAGGCTTATCCGGTGCAAAGCTGTGGAGCCCTaGAAACTTGAGGCCCACGCTAAAGAAAGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PSRLIRCKAVEP*KLEAHAKESQA Trigger: GGCCTGGCTTTCTTTAGCGTGGGCCTCAAGTTTCCAGGGCTCCACAGCTTTGCACCGGATAAGCCTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 72 bp | TTCGGGTGGTACACGAAGAGCCTCTGTCCATTAGGGTaGCAGCCGACCCAGATGTCGCCCGAGGAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: FGWYTKSLCPLG*QPTQMSPEEGS Trigger: TGATCCTTCCTCGGGCGACATCTGGGTCGGCTGTCACCCTAATGGACAGAGGCTCTTCGTGTACCACCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 90 bp | AAGCCCCAGCTGACTCTCAACTCCAGCGCCCTCGGTCTCTCGTCTTaGAGATCCATCATCAGTATCCCTCCAGGCTTATCCGGTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KPQLTLNSSALGLSS*RSIISIPPGLSGAK Trigger: CTTTGCACCGGATAAGCCTGGAGGGATACTGATGATGGATCTCAAAGACGAGAGACCGAGGGCGCTGGAGTTGAGAGTCAGCTGGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 72 bp | CTGACTCTCAACTCCAGCGCCCTCGGTCTCTCGTCTTaGAGATCCATCATCAGTATCCCTCCAGGCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: LTLNSSALGLSS*RSIISIPPGLS Trigger: GGATAAGCCTGGAGGGATACTGATGATGGATCTCAAAGACGAGAGACCGAGGGCGCTGGAGTTGAGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 72 bp | ATGGTCGCCACAGAACTTCCCTGGAGGACAGACCCGTaGTTGATATACACCGTTGTCACTGATGGCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: MVATELPWRTDP*LIYTVVTDGFS Trigger: CGAGAAGCCATCAGTGACAACGGTGTATATCAACAACGGGTCTGTCCTCCAGGGAAGTTCTGTGGCGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 72 bp | ACCGTTGTCACTGATGGCTTCTCGGATAGAATGTTCTaGATGCGGAGGACCTCTGATGCAGGAGGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: TVVTDGFSDRMF*MRRTSDAGGWF Trigger: GAACCATCCTCCTGCATCAGAGGTCCTCCGCATTCAGAACATTCTATCCGAGAAGCCATCAGTGACAACGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 72 bp | ACCCAGATGTCGCCCGAGGAAGGATCAATAGATAAATaGTCCACCAGCGTGCCCAACTGCAGAACCTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: TQMSPEEGSIDK*STSVPNCRTFS Trigger: ACTAAAGGTTCTGCAGTTGGGCACGCTGGTGGACAATTTATCTATTGATCCTTCCTCGGGCGACATCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CCA 72 bp | GGTATAAAGTGCCTACGAGAAGTTTCCTATCATATATaGTCGCCACAGAACTTCCCTGGAGGACAGACCCGT | + |
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Preference number: 6 (lower is better) Translates to: GIKCLREVSYHI*SPQNFPGGQTR Trigger: ACGGGTCTGTCCTCCAGGGAAGTTCTGTGGCGACCATATATGATAGGAAACTTCTCGTAGGCACTTTATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 90 bp | TCATATATGGTCGCCACAGAACTTCCCTGGAGGACAGACCCGTTGTaGATATACACCGTTGTCACTGATGGCTTCTCGGATAGAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SYMVATELPWRTDPL*IYTVVTDGFSDRMF Trigger: GAACATTCTATCCGAGAAGCCATCAGTGACAACGGTGTATATCAACAACGGGTCTGTCCTCCAGGGAAGTTCTGTGGCGACCATATATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CAA 90 bp | CTATCATATATGGTCGCCACAGAACTTCCCTGGAGGACAGACCCGTaGTTGATATACACCGTTGTCACTGATGGCTTCTCGGATAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LSYMVATELPWRTDP*LIYTVVTDGFSDRM Trigger: CATTCTATCCGAGAAGCCATCAGTGACAACGGTGTATATCAACAACGGGTCTGTCCTCCAGGGAAGTTCTGTGGCGACCATATATGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS CCA 72 bp | TGTATCATCGTCATCTATGAAAGTGCTAATGCCATGTaGGTTAAACGAAGCCAGATCAAAGCCCCAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: CIIVIYESANAM*VKRSQIKAPAD Trigger: GTCAGCTGGGGCTTTGATCTGGCTTCGTTTAACCCACATGGCATTAGCACTTTCATAGATGACGATGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 72 bp | CAGTATGTCAGCAACGTAGACATACTTTTTATCAGGTaGAATATTGATCCCGTTGGCGGAATCGAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QYVSNVDILFIR*NIDPVGGIESF Trigger: GAAGGATTCGATTCCGCCAACGGGATCAATATTTCACCTGATAAAAAGTATGTCTACGTTGCTGACATACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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| CDS TCA 72 bp | TTGTCCACCAGCGTGCCCAACTGCAGAACCTTTAGTTaGGTTAAATTCATATTAGGTTGTTTTTCCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: LSTSVPNCRTFS*VKFILGCFSKT Trigger: TGTTTTGGAAAAACAACCTAATATGAATTTAACTCAACTAAAGGTTCTGCAGTTGGGCACGCTGGTGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057792.9 |
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