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Pregenerated sensors for POMT2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034126

Ensembl transcript IDs: ENSMUST00000037788.6, ENSMUST00000222634.2

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCATCCATCCCAGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTTaGTCAGCCCTTGCAACTCTGCAGGCAGTTGTATCCCTCTCTGCA +
Preference number: 1 (lower is better)
Translates to: ASIPGAAGHLLAAAP*SALATLQAVVSLSA
Trigger: TGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGGGATGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR TCA 90 bp ACCCGGATCCAGGCTGGGGTCCTGGCAGTGGCCTCAAAAGTCCCATaGTTCCAGCCACCTCAGTCCTGCCATTGGACTCTCAGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: TRIQAGVLAVASKVP*FQPPQSCHWTLRFL
Trigger: CAGGAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACTGCCAGGACCCCAGCCTGGATCCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR GCA 90 bp AGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTTGGTCAGCCCTTaGAACTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCA +
Preference number: 1 (lower is better)
Translates to: RSSWPPPRSSTLVSP*NSAGSCIPLCIATA
Trigger: TGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 90 bp GCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTaGGTGTCCCTGGATAAAACCCGGATCCAGGCTGGGGTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: AAPLELEGSRIWLHS*VSLDKTRIQAGVLA
Trigger: TGCCAGGACCCCAGCCTGGATCCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR GCA 90 bp TCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCAGTaGTGTAGGTCACGTGCCCCGTGCAGGTGCTGTAGACAGGGCTGT +
Preference number: 1 (lower is better)
Translates to: SCLLSLCFTGTGTEQ*CRSRAPCRCCRQGC
Trigger: ACAGCCCTGTCTACAGCACCTGCACGGGGCACGTGACCTACAGCACTGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR GCA 90 bp CTGGCCACCTCCTCGCAGCAGCACCTTGGTCAGCCCTTGCAACTCTaGAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCT +
Preference number: 1 (lower is better)
Translates to: LATSSQQHLGQPLQL*RQLYPSLHSHSNGA
Trigger: AGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 90 bp TGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCCTaGATAAAACCCGGATCCAGGCTGGGGTCCTGGCAGTGGCCTCAA +
Preference number: 1 (lower is better)
Translates to: WSWKGPESGFIAGCP*IKPGSRLGSWQWPQ
Trigger: TTGAGGCCACTGCCAGGACCCCAGCCTGGATCCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 90 bp TGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTaGCTTCATAGCTGGGTGTCCCTGGATAAAACCCGGATCCAGGCT +
Preference number: 1 (lower is better)
Translates to: WVPQAAPLELEGSRI*LHSWVSLDKTRIQA
Trigger: AGCCTGGATCCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 90 bp CAGGACTATTTCCCAGAGTTTGGTCCTGGGGGCAGCAGAATGTTTTaGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATC +
Preference number: 1 (lower is better)
Translates to: QDYFPEFGPGGSRMF*VPQAAPLELEGSRI
Trigger: GATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACCAAACTCTGGGAAATAGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 90 bp CAGGAGGGGAGTCAAAAGGCTGTAGCCACGGGTGAGGATGGTCAGTaGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCTTGACAGGG +
Preference number: 1 (lower is better)
Translates to: QEGSQKAVATGEDGQ*VSDLISCSALLLTG
Trigger: CCCTGTCAAGAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGTGGCTACAGCCTTTTGACTCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTaGTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCAGTGCTGTA +
Preference number: 1 (lower is better)
Translates to: TLQRDWADVPSDTHA*FPCASQELAPSSAV
Trigger: TACAGCACTGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 90 bp CAGGCAGATGCAGAGAAAAGGGGACGGACAGTGAGAAACAGACACTaGGTACATAGCCAAGGTGTGTGTTCCACTCACCCAGTTCACAGA +
Preference number: 1 (lower is better)
Translates to: QADAEKRGRTVRNRH*VHSQGVCSTHPVHR
Trigger: TCTGTGAACTGGGTGAGTGGAACACACACCTTGGCTATGTACCCAGTGTCTGTTTCTCACTGTCCGTCCCCTTTTCTCTGCATCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 90 bp ATCCTGTTAACCTTGGACCATTTCTTGGAATTTATGACACTTGGCTaGCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGAT +
Preference number: 1 (lower is better)
Translates to: ILLTLDHFLEFMTLG*HSYMVYTLQRDWAD
Trigger: ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 90 bp GAATATCCTGTTAACCTTGGACCATTTCTTGGAATTTATGACACTTaGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGC +
Preference number: 1 (lower is better)
Translates to: EYPVNLGPFLGIYDT*LPQLHGLHTPKGLG
Trigger: GCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 90 bp ACTCTGACCCTGTCAGAGTCATTAAGAGCTACAGTAGAGGGAAGGTaGACTGTGGTAAATTCATTAAGCCTTGAAATACCAAAATCTTCT +
Preference number: 1 (lower is better)
Translates to: TLTLSESLRATVEGR*TVVNSLSLEIPKSS
Trigger: AGAAGATTTTGGTATTTCAAGGCTTAATGAATTTACCACAGTCCACCTTCCCTCTACTGTAGCTCTTAATGACTCTGACAGGGTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR GCA 90 bp CCGAGCAGTGCTGTAGGTCACGTGCCCCGTGCAGGTGCTGTAGACAGGGCTGTGCGTGCCCCGTGCAGGTaGTGTAGACAGGGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: PSSAVGHVPRAGAVDRAVRAPCR*CRQGCG
Trigger: GCCACAGCCCTGTCTACAGCACCTGCACGGGGCACG...CACAGCCCTGTCTACAGCACCTGCACGGGGCACGTGACCTACAGCACTGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CAA 90 bp CAGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTTGGTCAGCCCTaGCAACTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: QEQLATSSQQHLGQP*QLCRQLYPSLHSHS
Trigger: GCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CAA 90 bp AGCATCCATCCCAGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTaGGTCAGCCCTTGCAACTCTGCAGGCAGTTGTATCCCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SIHPRSSWPPPRSST*VSPCNSAGSCIPLC
Trigger: GCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGGGATGGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CAA 90 bp GGTCCTGGGGGCAGCAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTaGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: GPGGSRMFWVPQAAP*ELEGSRIWLHSWVS
Trigger: GGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CAA 90 bp TCCTCGCAGCAGCACCTTGGTCAGCCCTTGCAACTCTGCAGGCAGTaGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCCGAGAG +
Preference number: 2 (lower is better)
Translates to: SSQQHLGQPLQLCRQ*YPSLHSHSNGAPRE
Trigger: CTCTCGGGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGCATCCCAGGAGCAGCTaGCCACCTCCTCGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: DWADVPSDTHACFPCASQHPRSS*PPPRSS
Trigger: GCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGGGATG...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR TCA 90 bp GACTCTCAGGTTCCTGGGCTAGGGGACCAACCATCCCATAAGCCAGAGGGTGGAAAAGAGAGCTGGGGATaGAAGGACACCAGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: DSQVPGLGDQPSHKPEGGKESWG*KDTSFC
Trigger: GCAGAAGCTGGTGTCCTTTCATCCCCAGCTCTCTTT...TCCACCCTCTGGCTTATGGGATGGTTGGTCCCCTAGCCCAGGAACCTGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR GCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCATCTGACACTCATGCCTaGTTTCCTTGTGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPSDTHA*FPCASQ
Trigger: CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGA...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp CAACTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCCTCAGGCAGCTCCCTTaGAGCTGGAAGGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: QLCRQLYPSLHSHSNGAPLRQLP*SWKGPE
Trigger: TTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAG...GGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR GCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTGGAGGTAGAGGACAATaGTCACCAGATTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCGGRGQ*SPDSAT
Trigger: GGTGGCTGAATCTGGTGAGCATTGTCCTCTACCTCC...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp GCCAGCAATGCAATTAAGCAGGCAGCCCAGACTTTGTGCACAAGCTGCACTTCCCTCAGGCAGCTCCCTTaGAGCTGGAAGGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: ASNAIKQAAQTLCTSCTSLRQLP*SWKGPE
Trigger: TTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAG...GGAAGTGCAGCTTGTGCACAAAGTCTGGGCTGCCTGCTTAATTGCATTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR CCA 90 bp GCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCCTATTTCCCAGAGTTTaGTCCTGGGGGCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: AAPLELEGSRIWLHSWVSLFPRV*SWGQQN
Trigger: ATTCTGCTGCCCCCAGGACCAAACTCTGGGAAATAG...GGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp AGAATCTACCCACATGGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTGGTTTGCTCTGACTCAGTaGCTCTGTAAGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RIYPHGAPTGSEETSPAWFALTQ*LCKPAG
Trigger: TCCTGCTGGCTTACAGAGCCACTGAGTCAGAGCAAA...CCAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR TCA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCAAGGCCAACCATAGGCTaGCAAGTTCTCTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRARPTIG*QVLCQL
Trigger: AAGCTGGCAGAGAACTTGTCAGCCTATGGTTGGCCT...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR TCA 90 bp ATAGCCAAGGTGTGTGTTCCACTCACCCAGTTCACAGAACAGGGACCAAAAACCCCCCGAAACTCAGGGTaGTTGGCTAGCCTCACTGGA +
Preference number: 2 (lower is better)
Translates to: IAKVCVPLTQFTEQGPKTPRNSG*LASLTG
Trigger: TCCAGTGAGGCTAGCCAATCACCCTGAGTTTCGGGG...GGTTTTTGGTCCCTGTTCTGTGAACTGGGTGAGTGGAACACACACCTTGGCTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR GCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTCAGCCCTTGCAACTCTaGAGGCAGTTGTATCCCTCT +
Preference number: 2 (lower is better)
Translates to: TLQRDWADVPSDTHACFPQPLQL*RQLYPS
Trigger: AGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTG...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp CTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCCGAATCTGGCTTCATAGCTaGGTGTCCCTGGATAAAACC +
Preference number: 2 (lower is better)
Translates to: LCRQLYPSLHSHSNGAPRIWLHS*VSLDKT
Trigger: GGTTTTATCCAGGGACACCCAGCTATGAAGCCAGAT...TCGGGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR GCA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCATCTGACACTCATGCCTaGTTTCCTTGTGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRASDTHA*FPCASQ
Trigger: CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGA...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTCTATTTCCCAGAGTTTaGTCCTGGGGGCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: TLQRDWADVPSDTHACFPLFPRV*SWGQQN
Trigger: ATTCTGCTGCCCCCAGGACCAAACTCTGGGAAATAG...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp AGTAGTGGTGGAAGTAGAGGATCCGGCCCATCAAGAAGAAAGGGAAGTAATGGACTCGCAGCAGCACCTTaGTCAGCCCTTGCAACTCTG +
Preference number: 2 (lower is better)
Translates to: SSGGSRGSGPSRRKGSNGLAAAP*SALATL
Trigger: CAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAG...TCCATTACTTCCCTTTCTTCTTGATGGGCCGGATCCTCTACTTCCACCACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGATCTGGCTTCATAGCTaGGTGTCCCTGGATAAAACC +
Preference number: 2 (lower is better)
Translates to: DWADVPSDTHACFPCASQIWLHS*VSLDKT
Trigger: GGTTTTATCCAGGGACACCCAGCTATGAAGCCAGAT...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR TCA 90 bp TGGCAACCACCTCCTGAAGATGCTTTAAAGAACTCTGACCCTGTCAGAGTCATTCCCAGGTCTTTGCTCTaGCTCAGTGGCTCTGTAAGC +
Preference number: 2 (lower is better)
Translates to: WQPPPEDALKNSDPVRVIPRSLL*LSGSVS
Trigger: GCTTACAGAGCCACTGAGTCAGAGCAAAGACCTGGG...AATGACTCTGACAGGGTCAGAGTTCTTTAAAGCATCTTCAGGAGGTGGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR GCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTTTATGACACTTGGCTaGCACAGTTACATGGTCTAC +
Preference number: 2 (lower is better)
Translates to: TLQRDWADVPSDTHACFPFMTLG*HSYMVY
Trigger: GTAGACCATGTAACTGTGGCAGCCAAGTGTCATAAA...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTGGAATTTATGACACTTaGCTGCCACAGTTACATGGT +
Preference number: 2 (lower is better)
Translates to: TLQRDWADVPSDTHACFPGIYDT*LPQLHG
Trigger: ACCATGTAACTGTGGCAGCCAAGTGTCATAAATTCC...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CCA 90 bp ACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCATTATTAGGGAGGGCTaGAAGTGTGAAGACAGGAAT +
Preference number: 2 (lower is better)
Translates to: TGEDGQWVSDLISCSALLIIREG*KCEDRN
Trigger: ATTCCTGTCTTCACACTTCCAGCCCTCCCTAATAAT...GAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR TCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGGGCAGATGTACCCTCTaGCACTCATGCCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMGRCTL*HSCLLS
Trigger: GGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCC...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR CCA 90 bp GAAAAGATACCAGAGAATATCCTGTTAACCTTGGACCATTTCTTGGAATTTATGCCCAGAGTTTGGTCCTaGGGGCAGCAGAATGTTTTG +
Preference number: 2 (lower is better)
Translates to: EKIPENILLTLDHFLEFMPRVWS*GQQNVL
Trigger: CAAAACATTCTGCTGCCCCCAGGACCAAACTCTGGG...CATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTCTCTGGTATCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR GCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGTCATGCATGTTCAGGTaGTCTGGGTTTTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMSCMFR*SGFWGK
Trigger: TTTCCCCCAAAACCCAGAGCACCTGAACATGCATGA...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CAA 90 bp AACCAAATCCAATGTGAAAAGATACCAGAGAATATCCTGTTAACCTaGGACCATTTCTTGGAATTTATGACACTTGGCTGCCACAGTTAC +
Preference number: 2 (lower is better)
Translates to: NQIQCEKIPENILLT*DHFLEFMTLGCHSY
Trigger: GTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTCTCTGGTATCTTTTCACATTGGATTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR CAA 90 bp GCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAAGCCCCTCGCAGCAGCACCTaGGTCAGCCCTTGCAACTCT +
Preference number: 3 (lower is better)
Translates to: AQDSHRMYPPTQGRRGQAPRSST*VSPCNS
Trigger: AGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGG...GGCTTGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 72 bp CCAGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTTaGTCAGCCCTTGCAACTCTGCAGGCAGTTGTATCC +
Preference number: 3 (lower is better)
Translates to: PGAAGHLLAAAP*SALATLQAVVS
Trigger: GGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CAA 90 bp AGAATCTACCCACATGGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTGGGCCTGCAGGCAAGGGTaGGGGAGGGCAATGAGAGCA +
Preference number: 3 (lower is better)
Translates to: RIYPHGAPTGSEETSPAWACRQG*GRAMRA
Trigger: TGCTCTCATTGCCCTCCCCAACCCTTGCCTGCAGGC...CCAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 72 bp CCTGTATCCCCTCTCCAGGAGAATCTACCCACATGGTaGCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PVSPLQENLPTW*PHWVRRNQPCL
Trigger: CAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCTCCTGGAGAGGGGATACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CCA 72 bp GCCTGGCACATCTTCCTTCTCACCAGCCGGCTGAGATaGACCACATCTCTGTCAGTTCCCAAGGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: AWHIFLLTSRLR*TTSLSVPKGCS
Trigger: GCTGCAGCCCTTGGGAACTGACAGAGATGTGGTCCATCTCAGCCGGCTGGTGAGAAGGAAGATGTGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR TCA 72 bp AGGCTGCCTGGCACATCTTCCTTCTCACCAGCCGGCTaGGATGGACCACATCTCTGTCAGTTCCCAAGGGCT +
Preference number: 3 (lower is better)
Translates to: RLPGTSSFSPAG*DGPHLCQFPRA
Trigger: AGCCCTTGGGAACTGACAGAGATGTGGTCCATCTCAGCCGGCTGGTGAGAAGGAAGATGTGCCAGGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 72 bp GCCAGCAATGCAATTAAGCAGGCAGCCCAGACTTTGTaGACAAGCTGCACTTCCTGCTGGGGTGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: ASNAIKQAAQTL*TSCTSCWGVGA
Trigger: TGCCCCCACACCCCAGCAGGAAGTGCAGCTTGTGCACAAAGTCTGGGCTGCCTGCTTAATTGCATTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 72 bp AAAGTGTGGTGGGTCAAGACCCTGGCTGTGTTAGGCTaGCTGGCACATCTTCCTTCTCACCAGCCGGCTGAG +
Preference number: 3 (lower is better)
Translates to: KVWWVKTLAVLG*LAHLPSHQPAE
Trigger: CTCAGCCGGCTGGTGAGAAGGAAGATGTGCCAGGCAGCCTAACACAGCCAGGGTCTTGACCCACCACACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 72 bp TGGCCACCTCCTCGCAGCAGCACCTTGGTCAGCCCTTaGAACTCTGCAGGCAGTTGTATCCCTCTCTGCATA +
Preference number: 3 (lower is better)
Translates to: WPPPRSSTLVSP*NSAGSCIPLCI
Trigger: TATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 72 bp AAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCCTaGATAAAACCCGGATCCAGGCTGGGGTCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: KGPESGFIAGCP*IKPGSRLGSWQ
Trigger: CTGCCAGGACCCCAGCCTGGATCCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 72 bp CAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTaGCTTCATAGCTGGGTGTCCCTGGATAAAACCCGG +
Preference number: 3 (lower is better)
Translates to: QAAPLELEGSRI*LHSWVSLDKTR
Trigger: CCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 72 bp TTCCCAGAGTTTGGTCCTGGGGGCAGCAGAATGTTTTaGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: FPEFGPGGSRMF*VPQAAPLELEG
Trigger: CCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACCAAACTCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR GCA 72 bp AGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTaGTTTCCTTGTGCTTCACAGGAACTGGCACCGAGC +
Preference number: 3 (lower is better)
Translates to: RDWADVPSDTHA*FPCASQELAPS
Trigger: GCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR GCA 72 bp CAGCAATGGTGCTCCCCGAGAGGAGGTAGAGGACAATaGTCACCAGATTCAGCCACCAGACCACCTGTATGG +
Preference number: 3 (lower is better)
Translates to: QQWCSPRGGRGQ*SPDSATRPPVW
Trigger: CCATACAGGTGGTCTGGTGGCTGAATCTGGTGAGCATTGTCCTCTACCTCCTCTCGGGGAGCACCATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CCA 72 bp TTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTaGGTGTCCCTGGATAAAACCCGGATCCAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LELEGSRIWLHS*VSLDKTRIQAG
Trigger: CCCAGCCTGGATCCGGGTTTTATCCAGGGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 72 bp ATTCCTGTATCCCCTCTCCAGGAGAATCTACCCACATaGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: IPVSPLQENLPT*CPHWVRRNQPC
Trigger: GCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCTCCTGGAGAGGGGATACAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR CAA 90 bp CAGTGGCCTCAAAAGTCCCATGATTCCAGCCACCTCAGTCCTGCCATTGGACTCACTATTTCCCAGAGTTaGGTCCTGGGGGCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: QWPQKSHDSSHLSPAIGLTISQS*VLGAAE
Trigger: TTCTGCTGCCCCCAGGACCAAACTCTGGGAAATAGT...GAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR-3UTR CAA 90 bp GCAGCCCACACGCAAAGCAGCACCCTAGCGCCCACTGCCCCTCCATCTTCCAAAACCTTGGACCATTTCTaGGAATTTATGACACTTGGC +
Preference number: 3 (lower is better)
Translates to: AAHTQSSTLAPTAPPSSKTLDHF*EFMTLG
Trigger: GCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGT...TTTGGAAGATGGAGGGGCAGTGGGCGCTAGGGTGCTGCTTTGCGTGTGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CCA 72 bp GAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTaGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: ECFGFLRQLPWS*KGPESGFIAGC
Trigger: ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CAA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGACTATTTCCCAGAGTTaGGTCCTGGGGGCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: DWADVPSDTHACFPCASQTISQS*VLGAAE
Trigger: TTCTGCTGCCCCCAGGACCAAACTCTGGGAAATAGT...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR-3UTR CAA 90 bp AGTCAAAAGGCTGTAGCCACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAAGTTCTCTGCCAGCTaGTGCTGGCACCCAGTGCAC +
Preference number: 3 (lower is better)
Translates to: SQKAVATGEDGQWVSDLIKFSAS*CWHPVH
Trigger: GTGCACTGGGTGCCAGCACAAGCTGGCAGAGAACTT...AATTAGATCTGAGACCCACTGACCATCCTCACCCGTGGCTACAGCCTTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CCA 72 bp CCCATAGGATACCTGTCAACATGCTGGAAAAGAGCATaGCTGGGAAGTAGTGGTGGAAGTAGAGGATCCGGC +
Preference number: 3 (lower is better)
Translates to: PIGYLSTCWKRA*LGSSGGSRGSG
Trigger: GCCGGATCCTCTACTTCCACCACTACTTCCCAGCCATGCTCTTTTCCAGCATGTTGACAGGTATCCTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR GCA 72 bp GGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTaGTCTGCCTTGCTCTTGACAGGGCTACATTTCCTC +
Preference number: 3 (lower is better)
Translates to: GEDGQWVSDLIS*SALLLTGLHFL
Trigger: GAGGAAATGTAGCCCTGTCAAGAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR GCA 72 bp CCACTAAACTCTGCTACCTACTCTGGCTCTAAAGGCTaGCCTCTGGTTACTCTAGGGTTCCTTCCCTCTAAC +
Preference number: 3 (lower is better)
Translates to: PLNSATYSGSKG*PLVTLGFLPSN
Trigger: GTTAGAGGGAAGGAACCCTAGAGTAACCAGAGGGCAGCCTTTAGAGCCAGAGTAGGTAGCAGAGTTTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR-3UTR CAA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCAACCTTGGACCATTTCTaGGAATTTATGACACTTGGC +
Preference number: 3 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRATLDHF*EFMTLG
Trigger: GCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGT...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR GCA 72 bp ACCTTGGACCATTTCTTGGAATTTATGACACTTGGCTaGCACAGTTACATGGTCTACACACTCCAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: TLDHFLEFMTLG*HSYMVYTLQRD
Trigger: GTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 72 bp GACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTaGAAGTGTGAAGACAGGAATGCCAAGCAAGAAATG +
Preference number: 3 (lower is better)
Translates to: DQKAKEGIIREG*KCEDRNAKQEM
Trigger: CATTTCTTGCTTGGCATTCCTGTCTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CCA 72 bp GTTAACCTTGGACCATTTCTTGGAATTTATGACACTTaGCTGCCACAGTTACATGGTCTACACACTCCAAAG +
Preference number: 3 (lower is better)
Translates to: VNLGPFLGIYDT*LPQLHGLHTPK
Trigger: CTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CCA 72 bp CTGTCAGAGTCATTAAGAGCTACAGTAGAGGGAAGGTaGACTGTGGTAAATTCATTAAGCCTTGAAATACCA +
Preference number: 3 (lower is better)
Translates to: LSESLRATVEGR*TVVNSLSLEIP
Trigger: TGGTATTTCAAGGCTTAATGAATTTACCACAGTCCACCTTCCCTCTACTGTAGCTCTTAATGACTCTGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR GCA 90 bp CCGAGCAGTGCTGTAGGTCACGTGCCCCGTGCAGGTGCTGTAGACAGGGCTGTGACGGCTCTGGCAGCCTaGGGCACACAGCGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: PSSAVGHVPRAGAVDRAVTALAA*GTQRPL
Trigger: TAGGGGCCGCTGTGTGCCGCAGGCTGCCAGAGCCGT...CACAGCCCTGTCTACAGCACCTGCACGGGGCACGTGACCTACAGCACTGCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAGGCTGGTCCAGCCGGTaGAAGCGGGTGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPGWSSR*KRVAKD
Trigger: GTCCTTTGCCACCCGCTTTCACCGGCTGGACCAGCC...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp CCGAGCAGTGCTGTAGGTCACGTGCCCCGTGCAGGTGCTGTAGACAGGGCTGTGGCTGGCGAGCACCAATaGCCTCAGGGTAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PSSAVGHVPRAGAVDRAVAGEHQ*PQGRGA
Trigger: GGCACCTCTACCCTGAGGGCATTGGTGCTCGCCAGC...CACAGCCCTGTCTACAGCACCTGCACGGGGCACGTGACCTACAGCACTGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAGCTGGCGAGCACCAATaGCCTCAGGGTAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPAGEHQ*PQGRGA
Trigger: GGCACCTCTACCCTGAGGGCATTGGTGCTCGCCAGC...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCTAGGCCACCGCCTATaGCCGGCGGCATCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCLGHRL*PAASSP
Trigger: AGGGGAGGATGCCGCCGGCCATAGGCGGTGGCCTAG...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp AGAATCTACCCACATGGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTGGTCACCACAGCCAACGTaGCCCACCACCCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RIYPHGAPTGSEETSPAWSPQPT*PTTLPP
Trigger: AGGCGGCAGGGTGGTGGGCCACGTTGGCTGTGGTGA...CCAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAGCCGGTGAAAGCGGGTaGCAAAGGACAGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPAGESG*QRTAAS
Trigger: TGACGCTGCTGTCCTTTGCCACCCGCTTTCACCGGC...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CAA 72 bp CCCAGGAGCAGCTGGCCACCTCCTCGCAGCAGCACCTaGGTCAGCCCTTGCAACTCTGCAGGCAGTTGTATC +
Preference number: 4 (lower is better)
Translates to: PRSSWPPPRSST*VSPCNSAGSCI
Trigger: GATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTACGGCTCTGGCAGCCTaGGGCACACAGCGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: TLQRDWADVPSDTHACFPTALAA*GTQRPL
Trigger: TAGGGGCCGCTGTGTGCCGCAGGCTGCCAGAGCCGT...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp CCGAGCAGTGCTGTAGGTCACGTGCCCCGTGCAGGTGCTGTAGACAGGGCTGTGCAGCCCTTGCAACTCTaGAGGCAGTTGTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSSAVGHVPRAGAVDRAVQPLQL*RQLYPS
Trigger: AGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTG...CACAGCCCTGTCTACAGCACCTGCACGGGGCACGTGACCTACAGCACTGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp CAACTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCTCACCACAGCCAACGTaGCCCACCACCCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLCRQLYPSLHSHSNGAPSPQPT*PTTLPP
Trigger: AGGCGGCAGGGTGGTGGGCCACGTTGGCTGTGGTGA...GGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp GGTCCTGGGGGCAGCAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGCTCGCAGCAGCACCTTaGTCAGCCCTTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: GPGGSRMFWVPQAAPLELLAAAP*SALATL
Trigger: CAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAG...CAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CAA 72 bp CTGGCCACCTCCTCGCAGCAGCACCTTGGTCAGCCCTaGCAACTCTGCAGGCAGTTGTATCCCTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LATSSQQHLGQP*QLCRQLYPSLH
Trigger: ATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGGAGGTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATGGCTGGTCCAGCCGGTaGAAGCGGGTGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QNVLGSSGSSLGAGRVQNGWSSR*KRVAKD
Trigger: GTCCTTTGCCACCCGCTTTCACCGGCTGGACCAGCC...ATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GGTCCTGGGGGCAGCAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGCCCCACAGTCACCAGTaGAAGGCTGAGGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GPGGSRMFWVPQAAPLELPHSHQ*KAEVSK
Trigger: TTTGGAGACCTCAGCCTTTCACTGGTGACTGTGGGG...CAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCCCAAAGGCAGCACTATaGGGCACAGGATGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAPLELEGSRIWLHSWVSPKAAL*GTGCEQ
Trigger: CTGCTCGCATCCTGTGCCTCATAGTGCTGCCTTTGG...GGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp CTCTGCAGGCAGTTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCCGAGGAAGTCCGTGTCATTaGCCCCTGAGAAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LCRQLYPSLHSHSNGAPRGSPCH*PLRSAG
Trigger: GCCTGCGCTTCTCAGGGGCCAATGACACGGACTTCC...TCGGGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCAGCCCACACGCAAAGCAGCACCCTAGCGCCCACTGCCCCTCCATCTTCCAAACTTGAAAGGCAGAACTaGAGAAGCCATCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: AAHTQSSTLAPTAPPSSKLERQN*RSHHQD
Trigger: GTCCTGGTGATGGCTTCTTCAGTTCTGCCTTTCAAG...TTTGGAAGATGGAGGGGCAGTGGGCGCTAGGGTGCTGCTTTGCGTGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAGCAGCACATCCAGGCTaGTGTTTGGCAATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPAAHPG*CLAIWD
Trigger: ATCCCAAATTGCCAAACATCAGCCTGGATGTGCTGC...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp GCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCCAGGTAACTTCCAACTaGTCCCAGCCCCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: AAPLELEGSRIWLHSWVSQVTSN*SQPHLG
Trigger: GCCTAAGTGGGGCTGGGAGCAGTTGGAAGTTACCTG...GGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp GGTCCTGGCAGTGGCCTCAAAAGTCCCATGATTCCAGCCACCTCAGTCCTGCCAGGTGAGCAGTGCTGCTaGGAAGGACTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: GPGSGLKSPMIPATSVLPGEQCC*EGLGQI
Trigger: GATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACC...TGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACTGCCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCACAGGAGTTGTACTTaGCCATGCTCAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCHRSCT*PCSAWP
Trigger: CGGCCATGCTGAGCATGGTCAAGTACAACTCCTGTG...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCACCAAAGGCAGCACTATaGGGCACAGGATGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRAPKAAL*GTGCEQ
Trigger: CTGCTCGCATCCTGTGCCTCATAGTGCTGCCTTTGG...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAGGAGATTCTTCACAGTaGTTACAGAGCCATACGCCA +
Preference number: 4 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPGDSSQ*LQSHTP
Trigger: TGGCGTATGGCTCTGTAATCACTGTGAAGAATCTCC...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCAGGTAACTTCCAACTaGTCCCAGCCCCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCQVTSN*SQPHLG
Trigger: GCCTAAGTGGGGCTGGGAGCAGTTGGAAGTTACCTG...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp GCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCCTCAGGAAAACTGGGCTaGAGCACATCCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: AAPLELEGSRIWLHSWVSSGKLG*STSRLM
Trigger: CATCAGCCTGGATGTGCTGCAGCCCAGTTTTCCTGA...GGACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTGGTGAGCAGTGCTGCTaGGAAGGACTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCGEQCC*EGLGQI
Trigger: GATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACC...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CAA 72 bp TTTCCCAGAGTTTGGTCCTGGGGGCAGCAGAATGTTTaGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPRVWSWGQQNV*GSSGSSLGAGR
Trigger: CCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCCCCCAGGACCAAACTCTGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp ATTCCAGCCACCTCAGTCCTGCCATTGGACTCTCAGGTTCCTGGGCTAGGGGACCTTGAAAGGCAGAACTaGAGAAGCCATCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPATSVLPLDSQVPGLGDLERQN*RSHHQD
Trigger: GTCCTGGTGATGGCTTCTTCAGTTCTGCCTTTCAAG...GTCCCCTAGCCCAGGAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp CAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATAGCGGTGAGCAGTGCTaGTGGGAAGGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: QNVLGSSGSSLGAGRVQNSGEQC*WEGLGQ
Trigger: CTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCT...ATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp CATGATTCCAGCCACCTCAGTCCTGCCATTGGACTCTCAGGTTCCTGGGCTAGGGGATACTCACAGGGTTaGCGAGCAGATAGACTCGGA +
Preference number: 4 (lower is better)
Translates to: HDSSHLSPAIGLSGSWARGYSQG*RADRLG
Trigger: TCCGAGTCTATCTGCTCGGCAACCCTGTGAGTATCC...CCTAGCCCAGGAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp GCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCAAGCCCAACCTGTGACCAAATaGATGAGGCGAATTCGACTT +
Preference number: 4 (lower is better)
Translates to: AQDSHRMYPPTQGRRGQAQPVTK*MRRIRL
Trigger: AAGTCGAATTCGCCTCATCCATTTGGTCACAGGTTG...GGCTTGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
3UTR CAA 72 bp GGCAGCAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTaGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: GSRMFWVPQAAP*ELEGSRIWLHS
Trigger: GCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
3UTR CAA 72 bp CAGCACCTTGGTCAGCCCTTGCAACTCTGCAGGCAGTaGTATCCCTCTCTGCATAGCCACAGCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: QHLGQPLQLCRQ*YPSLHSHSNGA
Trigger: AGCACCATTGCTGTGGCTATGCAGAGAGGGATACAACTGCCTGCAGAGTTGCAAGGGCTGACCAAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp ACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCCACAGGAGTTGTACTTaGCCATGCTCAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: TGEDGQWVSDLISCSALLHRSCT*PCSAWP
Trigger: CGGCCATGCTGAGCATGGTCAAGTACAACTCCTGTG...GAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp CAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCCCCACAGTCACCAGTaGAAGGCTGAGGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QNVLGSSGSSLGAGRVQNPHSHQ*KAEVSK
Trigger: TTTGGAGACCTCAGCCTTTCACTGGTGACTGTGGGG...ATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GAGGTAGAAGCTGTAGGCAGTTGTCAGAAGCAGGCTCAGGATTCCCACCGCATGGCCAGGGCTTGGATGTaGACTCATTGTCCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EVEAVGSCQKQAQDSHRMARAWM*THCPWV
Trigger: AACCCAAGGACAATGAGTTCACATCCAAGCCCTGGC...CATGCGGTGGGAATCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp ACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCCAGCCACCTCAGTCCTaGCATTGGACTCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TGEDGQWVSDLISCSALLQPPQS*HWTLRF
Trigger: GAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTG...GAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATCCTCAGTCCTGCCATTaGACTCTCAGGTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADPQSCH*TLRFLG
Trigger: GCCCAGGAACCTGAGAGTCCAATGGCAGGACTGAGG...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGCCTGAAAGCCGGGCTTaGAAGGCAGAACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DWADVPSDTHACFPCASQPESRA*KAELKK
Trigger: CTTCTTCAGTTCTGCCTTTCAAGCCCGGCTTTCAGG...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCCAGCAATGCAATTAAGCAGGCAGCCCAGACTTTGTGCACAAGCTGCACTTCCAGGCAGAATCTTTCCTaGCGATCCCAGGACACAACC +
Preference number: 4 (lower is better)
Translates to: ASNAIKQAAQTLCTSCTSRQNLS*RSQDTT
Trigger: GGTTGTGTCCTGGGATCGTCAGGAAAGATTCTGCCT...GGAAGTGCAGCTTGTGCACAAAGTCTGGGCTGCCTGCTTAATTGCATTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp AGTGGCCTCAAAAGTCCCATGATTCCAGCCACCTCAGTCCTGCCATTGGACTCTAGGCAGAATCTTTCCTaGCGATCCCAGGACACAACC +
Preference number: 4 (lower is better)
Translates to: SGLKSPMIPATSVLPLDSRQNLS*RSQDTT
Trigger: GGTTGTGTCCTGGGATCGTCAGGAAAGATTCTGCCT...AGAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCACGGATCATGACCATGTaGGACTCCAGCAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRARIMTM*DSSKIS
Trigger: TGAGATCTTGCTGGAGTCTCACATGGTCATGATCCG...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGGAACTGGCACCGAGCACATTGTCCTTGGGTTTaGGGCCATTATTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: PLTLMPAFLVLHRNWHRAHCPWV*GHYFPG
Trigger: TCCGGGGAAATAATGGCCTCAAACCCAAGGACAATG...TGCTCGGTGCCAGTTCCTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCCAGCAATGCAATTAAGCAGGCAGCCCAGACTTTGTGCACAAGCTGCACTTCCGCCAGGGCTTGGATGTaGACTCATTGTCCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ASNAIKQAAQTLCTSCTSARAWM*THCPWV
Trigger: AACCCAAGGACAATGAGTTCACATCCAAGCCCTGGC...GGAAGTGCAGCTTGTGCACAAAGTCTGGGCTGCCTGCTTAATTGCATTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp GAGGTAGAAGCTGTAGGCAGTTGTCAGAAGCAGGCTCAGGATTCCCACCGCATGAGTGCAGGTAGCCAATaGCCATCCGGAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EVEAVGSCQKQAQDSHRMSAGSQ*PSGDSS
Trigger: TGAAGAATCTCCGGATGGCCATTGGCTACCTGCACT...CATGCGGTGGGAATCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTCTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATACAGATCCAGTACGGTaGGGTAGGCAAAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADTDPVR*GRQRGS
Trigger: TGATCCCCTTTGCCTACCTCACCGTACTGGATCTGT...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTAGAGGCCAACAAATTTaGCCCCTAAAGCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: TLQRDWADVPSDTHACFPRGQQI*PLKHQR
Trigger: TCGCTGGTGCTTTAGGGGTCAAATTTGTTGGCCTCT...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GAAGCTGTAGGCAGTTGTCAGAAGCAGGCTCAGGATTCCCACCGCATGTATCCTAGAGGCCAACAAATTTaGCCCCTAAAGCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: EAVGSCQKQAQDSHRMYPRGQQI*PLKHQR
Trigger: TCGCTGGTGCTTTAGGGGTCAAATTTGTTGGCCTCT...AGGATACATGCGGTGGGAATCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGCAGATGCCAGAGGTCTaGAATAGTGTTCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: DWADVPSDTHACFPCASQQMPEV*NSVQPH
Trigger: GTGGGGTTGAACACTATTTCAGACCTCTGGCATCTG...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GAAGCTGTAGGCAGTTGTCAGAAGCAGGCTCAGGATTCCCACCGCATGTATCCTCAGATGCCAGAGGTCTaGAATAGTGTTCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: EAVGSCQKQAQDSHRMYPQMPEV*NSVQPH
Trigger: GTGGGGTTGAACACTATTTCAGACCTCTGGCATCTG...AGGATACATGCGGTGGGAATCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CAGATTCAGCCACCAGACCACCTGTATGGAAAGAGAGCTGGGGATGAAAGGACACCTGAAAGCCGGGCTTaGAAGGCAGAACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QIQPPDHLYGKRAGDERTPESRA*KAELKK
Trigger: CTTCTTCAGTTCTGCCTTTCAAGCCCGGCTTTCAGG...TGTCCTTTCATCCCCAGCTCTCTTTCCATACAGGTGGTCTGGTGGCTGAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CAGATTCAGCCACCAGACCACCTGTATGGAAAGAGAGCTGGGGATGAAAGGACATTATGCCATAGCCAGTaGCCTGATAGTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QIQPPDHLYGKRAGDERTLCHSQ*PDSASG
Trigger: CCCGGAAGCACTATCAGGTCACTGGCTATGGCATAA...TGTCCTTTCATCCCCAGCTCTCTTTCCATACAGGTGGTCTGGTGGCTGAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp AAGCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCTTGGCAATTTGGGATTaGTATGCTCTTCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: KQAQDSHRMYPPTQGRRGLAIWD*YALLCS
Trigger: GGAACATAGAAGAGCATATCAATCCCAAATTGCCAA...GCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp GCCAGCAATGCAATTAAGCAGGCAGCCCAGACTTTGTGCACAAGCTGCACTTCCGCAGCACATCCAGGCTaGTGTTTGGCAATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: ASNAIKQAAQTLCTSCTSAAHPG*CLAIWD
Trigger: ATCCCAAATTGCCAAACATCAGCCTGGATGTGCTGC...GGAAGTGCAGCTTGTGCACAAAGTCTGGGCTGCCTGCTTAATTGCATTGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR GCA 90 bp CAGATTCAGCCACCAGACCACCTGTATGGAAAGAGAGCTGGGGATGAAAGGACAATGCGAGCAGTTAGGTaGTTCCCCACAGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: QIQPPDHLYGKRAGDERTMRAVR*FPTVTS
Trigger: ACTGGTGACTGTGGGGAAGCACCTAACTGCTCGCAT...TGTCCTTTCATCCCCAGCTCTCTTTCCATACAGGTGGTCTGGTGGCTGAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTCAGCATCTTTCCCAGTaGTGGATGCACATCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCQHLSQ*WMHIKE
Trigger: TTCTTTGATGTGCATCCACCACTGGGAAAGATGCTG...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp AAAAGTCCCATGATTCCAGCCACCTCAGTCCTGCCATTGGACTCTCAGGTTCCTAGATCTCAGGAAAACTaGGCTGCAGCACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSPMIPATSVLPLDSQVPRSQEN*AAAHPG
Trigger: GCCTGGATGTGCTGCAGCCCAGTTTTCCTGAGATCT...AGGAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp CAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTGCTGGAAAAGAGCATaGCTGGGAAGTAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QRDWADVPSDTHACFPCACWKRA*LGSSGG
Trigger: TCCACCACTACTTCCCAGCCATGCTCTTTTCCAGCA...AGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp CAGATTCAGCCACCAGACCACCTGTATGGAAAGAGAGCTGGGGATGAAAGGACACCGCCAGAAGTCATTTaGGTCCCCTGTCCCATTTAT +
Preference number: 4 (lower is better)
Translates to: QIQPPDHLYGKRAGDERTPPEVI*VPCPIY
Trigger: ATAAATGGGACAGGGGACTCAAATGACTTCTGGCGG...TGTCCTTTCATCCCCAGCTCTCTTTCCATACAGGTGGTCTGGTGGCTGAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CAGATTCAGCCACCAGACCACCTGTATGGAAAGAGAGCTGGGGATGAAAGGACACGGATCATGACCATGTaGGACTCCAGCAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: QIQPPDHLYGKRAGDERTRIMTM*DSSKIS
Trigger: TGAGATCTTGCTGGAGTCTCACATGGTCATGATCCG...TGTCCTTTCATCCCCAGCTCTCTTTCCATACAGGTGGTCTGGTGGCTGAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp ACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCGTGTTCAACCCCACTTaGACGATGATAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGEDGQWVSDLISCSALLVFNPT*TMIKRP
Trigger: TGGCCTCTTTATCATCGTGCAAGTGGGGTTGAACAC...GAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp AGAATCTACCCACATGGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTGGCATCTTTCCCAGTGGTaGATGCACATCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RIYPHGAPTGSEETSPAWHLSQW*MHIKEK
Trigger: TTTTTCTTTGATGTGCATCCACCACTGGGAAAGATG...CCAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp AGGCTGGGGTCCTGGCAGTGGCCTCAAAAGTCCCATGATTCCAGCCACCTCAGTCATCTTTCCCAGTGGTaGATGCACATCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RLGSWQWPQKSHDSSHLSHLSQW*MHIKEK
Trigger: TTTTTCTTTGATGTGCATCCACCACTGGGAAAGATG...ACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACTGCCAGGACCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp AGAATCTACCCACATGGTGCCCCCACTGGGTCAGAAGAAACCAGCCCTGCCTGGCATGAACAGCAAAAATaGTCACATAGAGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: RIYPHGAPTGSEETSPAWHEQQK*SHRAPK
Trigger: CTTTGGTGCTCTATGTGACCATTTTTGCTGTTCATG...CCAGGCAGGGCTGGTTTCTTCTGACCCAGTGGGGGCACCATGTGGGTAGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGGGAAGTCCGTGTCATTaGCCCCTGAGAAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKGSPCH*PLRSAG
Trigger: GCCTGCGCTTCTCAGGGGCCAATGACACGGACTTCC...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp CAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCCCATTTTTCCAAAGTaGGTCTCATCCCAACAGATG +
Preference number: 4 (lower is better)
Translates to: QNVLGSSGSSLGAGRVQNPIFPK*VSSQQM
Trigger: CATCTGTTGGGATGAGACTCACTTTGGAAAAATGGG...ATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATGGAGATTCTTCACAGTaGTTACAGAGCCATACGCCA +
Preference number: 4 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADGDSSQ*LQSHTP
Trigger: TGGCGTATGGCTCTGTAATCACTGTGAAGAATCTCC...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp AGTCAAAAGGCTGTAGCCACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTCCGCCAGAAGTCATTTaGGTCCCCTGTCCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SQKAVATGEDGQWVSDLIPPEVI*VPCPIY
Trigger: ATAAATGGGACAGGGGACTCAAATGACTTCTGGCGG...AATTAGATCTGAGACCCACTGACCATCCTCACCCGTGGCTACAGCCTTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR GCA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATAGCGGTGAGCAGTGCTaGTGGGAAGGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYSGEQC*WEGLGQ
Trigger: CTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCT...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp CAGAATGTTTTGGGTTCCTCAGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCAGCATCTTTCCCAGTaGTGGATGCACATCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QNVLGSSGSSLGAGRVQNQHLSQ*WMHIKE
Trigger: TTCTTTGATGTGCATCCACCACTGGGAAAGATGCTG...ATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCTGAGGAACCCAAAACATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp CAACCACCTCCTGAAGATGCTTTAAAGAACTCTGACCCTGTCAGAGTCATTAAGGGACTCTCAGGTTCCTaGGCTAGGGGACCAACCATC +
Preference number: 4 (lower is better)
Translates to: QPPPEDALKNSDPVRVIKGLSGS*ARGPTI
Trigger: GATGGTTGGTCCCCTAGCCCAGGAACCTGAGAGTCC...CTTAATGACTCTGACAGGGTCAGAGTTCTTTAAAGCATCTTCAGGAGGTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTTTTTATTCAGCACCATaGCATGAACAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCFYSAP*HEQQKW
Trigger: CCATTTTTGCTGTTCATGTCATGGTGCTGAATAAAA...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATAGGTCTCCAAACAGATaGCAGAGGTCTGAAATAGTG +
Preference number: 4 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADRSPNR*QRSEIV
Trigger: CACTATTTCAGACCTCTGGCATCTGTTTGGAGACCT...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATACCAGACCACAGGGTTaGCGAGCAGATAGACTCGGA +
Preference number: 4 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYTRPQG*RADRLG
Trigger: TCCGAGTCTATCTGCTCGGCAACCCTGTGGTCTGGT...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR GCA 90 bp TGGCAACCACCTCCTGAAGATGCTTTAAAGAACTCTGACCCTGTCAGAGTCATTGGAGGTAGAGGACAATaGTCACCAGATTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: WQPPPEDALKNSDPVRVIGGRGQ*SPDSAT
Trigger: GGTGGCTGAATCTGGTGAGCATTGTCCTCTACCTCC...AATGACTCTGACAGGGTCAGAGTTCTTTAAAGCATCTTCAGGAGGTGGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATCAACCTGTGACCAAATaGATGAGGCGAATTCGACTT +
Preference number: 4 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADQPVTK*MRRIRL
Trigger: AAGTCGAATTCGCCTCATCCATTTGGTCACAGGTTG...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR TCA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATTTATGCCATAGCCAGTaGCCTGATAGTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYLCHSQ*PDSASG
Trigger: CCCGGAAGCACTATCAGGTCACTGGCTATGGCATAA...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGTTGGCAATTTGGGATTaGTATGCTCTTCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: DWADVPSDTHACFPCASQLAIWD*YALLCS
Trigger: GGAACATAGAAGAGCATATCAATCCCAAATTGCCAA...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp GGAAGTAGAGGATCCGGCCCATCAAGAAGAAAGGGAAGTAATGGAGCATCCATCAGGTCTCCAAACAGATaGCAGAGGTCTGAAATAGTG +
Preference number: 4 (lower is better)
Translates to: GSRGSGPSRRKGSNGASIRSPNR*QRSEIV
Trigger: CACTATTTCAGACCTCTGGCATCTGTTTGGAGACCT...GATGGATGCTCCATTACTTCCCTTTCTTCTTGATGGGCCGGATCCTCTACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR GCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGATGCGAGCAGTTAGGTaGTTCCCCACAGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKMRAVR*FPTVTS
Trigger: ACTGGTGACTGTGGGGAAGCACCTAACTGCTCGCAT...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR GCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGTCAGGAAAACTGGGCTaGAGCACATCCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKSGKLG*STSRLM
Trigger: CATCAGCCTGGATGTGCTGCAGCCCAGTTTTCCTGA...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp CAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTCATGAACAGCAAAAATaGTCACATAGAGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: QRDWADVPSDTHACFPCAHEQQK*SHRAPK
Trigger: CTTTGGTGCTCTATGTGACCATTTTTGCTGTTCATG...AGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGATCCAGGCTGATGTTTaGCAATTTGGGATTGATATG +
Preference number: 4 (lower is better)
Translates to: DWADVPSDTHACFPCASQIQADV*QFGIDM
Trigger: CATATCAATCCCAAATTGCCAAACATCAGCCTGGAT...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGAGATCTCAGGAAAACTaGGCTGCAGCACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKRSQEN*AAAHPG
Trigger: GCCTGGATGTGCTGCAGCCCAGTTTTCCTGAGATCT...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGCATCCCAGGAGCAGCTaGCCACCTCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMHPRSS*PPPRSS
Trigger: GCTGCTGCGAGGAGGTGGCCAGCTGCTCCTGGGATG...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp GGAAGTAGAGGATCCGGCCCATCAAGAAGAAAGGGAAGTAATGGAGCATCCATCTTCAGCACCATGACATaGACAGCAAAAATGGTCACA +
Preference number: 4 (lower is better)
Translates to: GSRGSGPSRRKGSNGASIFSTMT*TAKMVT
Trigger: TGTGACCATTTTTGCTGTTCATGTCATGGTGCTGAA...GATGGATGCTCCATTACTTCCCTTTCTTCTTGATGGGCCGGATCCTCTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGGCCGGTGAAAGCGGGTaGCAAAGGACAGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMAGESG*QRTAAS
Trigger: TGACGCTGCTGTCCTTTGCCACCCGCTTTCACCGGC...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGATCCAGGCTGATGTTTaGCAATTTGGGATTGATATG +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKIQADV*QFGIDM
Trigger: CATATCAATCCCAAATTGCCAAACATCAGCCTGGAT...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp GAAATGACCAGAAAGCAAAAGAGGGTATTATTAGGGAGGGCTGGAAGTGTGAAGTTTTATTCAGCACCATaGCATGAACAGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: EMTRKQKRVLLGRAGSVKFYSAP*HEQQKW
Trigger: CCATTTTTGCTGTTCATGTCATGGTGCTGAATAAAA...CTTCACACTTCCAGCCCTCCCTAATAATACCCTCTTTTGCTTTCTGGTCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CCA 90 bp GAAAAGATACCAGAGAATATCCTGTTAACCTTGGACCATTTCTTGGAATTTATGAGTGCAGGTAGCCAATaGCCATCCGGAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EKIPENILLTLDHFLEFMSAGSQ*PSGDSS
Trigger: TGAAGAATCTCCGGATGGCCATTGGCTACCTGCACT...CATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTCTCTGGTATCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CAA 72 bp ATACCAGAGAATATCCTGTTAACCTTGGACCATTTCTaGGAATTTATGACACTTGGCTGCCACAGTTACATG +
Preference number: 4 (lower is better)
Translates to: IPENILLTLDHF*EFMTLGCHSYM
Trigger: CATGTAACTGTGGCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTCTCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGCCCATTTTTCCAAAGTaGGTCTCATCCCAACAGATG +
Preference number: 4 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMPIFPK*VSSQQM
Trigger: CATCTGTTGGGATGAGACTCACTTTGGAAAAATGGG...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
3UTR CAA 72 bp CAATGTGAAAAGATACCAGAGAATATCCTGTTAACCTaGGACCATTTCTTGGAATTTATGACACTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QCEKIPENILLT*DHFLEFMTLGC
Trigger: GCAGCCAAGTGTCATAAATTCCAAGAAATGGTCCAAGGTTAACAGGATATTCTCTGGTATCTTTTCACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR TCA 90 bp CTAATGGACTGGACTTGGGTTGATTTAGTTATGACAAAATTTTTACTCCCTATGTTCAGCACCATGACATaGACAGCAAAAATGGTCACA +
Preference number: 4 (lower is better)
Translates to: LMDWTWVDLVMTKFLLPMFSTMT*TAKMVT
Trigger: TGTGACCATTTTTGCTGTTCATGTCATGGTGCTGAA...CATAGGGAGTAAAAATTTTGTCATAACTAAATCAACCCAAGTCCAGTCCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS CCA 90 bp TTTGTAGTTCCCTCCGTTTGCCGCGGAGCGCCGGGCCCCGGGCTCTaGGCGGGGCGGAAAGTGTGGTGGCCGCCCGGGCAGCTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: FVVPSVCRGAPGPGL*AGRKVWWPPGQLRG
Trigger: GCCTCTTAGCTGCCCGGGCGGCCACCACACTTTCCGCCCCGCCCAGAGCCCGGGGCCCGGCGCTCCGCGGCAAACGGAGGGAACTACAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS GCA 90 bp AAGAAGGCGTCTCGAGGTGCCATGGGATTTGTAGTTCCCTCCGTTTaGCGCGGAGCGCCGGGCCCCGGGCTCTGGGCGGGGCGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: KKASRGAMGFVVPSV*RGAPGPGLWAGRKV
Trigger: CACTTTCCGCCCCGCCCAGAGCCCGGGGCCCGGCGCTCCGCGGCAAACGGAGGGAACTACAAATCCCATGGCACCTCGAGACGCCTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS CCA 90 bp CGCCGCGAGCTCCAAGCAGGCCGTTTAAGTTTCCGTGCTGCAGCCTaGGGGACCACGTCTCGGCTCACGGCTCTGGCAGCCTGCGGCACA +
Preference number: 5 (lower is better)
Translates to: RRELQAGRLSFRAAA*GTTSRLTALAACGT
Trigger: TGTGCCGCAGGCTGCCAGAGCCGTGAGCCGAGACGTGGTCCCCCAGGCTGCAGCACGGAAACTTAAACGGCCTGCTTGGAGCTCGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 90 bp GGTGAAAGCGGGTGGCAAAGGACAGCAGCGTCACCACAGCCAACGTaGCCCACCACCCTGCCGCCTGGAAGCGCCGCGAGCTCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: GESGWQRTAASPQPT*PTTLPPGSAASSKQ
Trigger: CTGCTTGGAGCTCGCGGCGCTTCCAGGCGGCAGGGTGGTGGGCCACGTTGGCTGTGGTGACGCTGCTGTCCTTTGCCACCCGCTTTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 90 bp CTGGAAGCGCCGCGAGCTCCAAGCAGGCCGTTTAAGTTTCCGTGCTaGAGCCTGGGGGACCACGTCTCGGCTCACGGCTCTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LEAPRAPSRPFKFPC*SLGDHVSAHGSGSL
Trigger: CAGGCTGCCAGAGCCGTGAGCCGAGACGTGGTCCCCCAGGCTGCAGCACGGAAACTTAAACGGCCTGCTTGGAGCTCGCGGCGCTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 90 bp GACAGCAGCGTCACCACAGCCAACGTGGCCCACCACCCTGCCGCCTaGAAGCGCCGCGAGCTCCAAGCAGGCCGTTTAAGTTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: DSSVTTANVAHHPAA*KRRELQAGRLSFRA
Trigger: AGCACGGAAACTTAAACGGCCTGCTTGGAGCTCGCGGCGCTTCCAGGCGGCAGGGTGGTGGGCCACGTTGGCTGTGGTGACGCTGCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 90 bp GGCAAAGGACAGCAGCGTCACCACAGCCAACGTGGCCCACCACCCTaGCGCCTGGAAGCGCCGCGAGCTCCAAGCAGGCCGTTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: GKGQQRHHSQRGPPP*RLEAPRAPSRPFKF
Trigger: AAACTTAAACGGCCTGCTTGGAGCTCGCGGCGCTTCCAGGCGGCAGGGTGGTGGGCCACGTTGGCTGTGGTGACGCTGCTGTCCTTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp CATGATTCCAGCCACCTCAGTCCTGCCATTGGACTCTCAGGTTCCTGGGCTAGGCGGAAGTCCGTGTCATaGGCCCCTGAGAAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HDSSHLSPAIGLSGSWARRKSVS*APEKRR
Trigger: CCTGCGCTTCTCAGGGGCCAATGACACGGACTTCCG...CCTAGCCCAGGAACCTGAGAGTCCAATGGCAGGACTGAGGTGGCTGGAATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS GCA 90 bp AGTGAGGCATCCTGTGTCAAAGGTGAGAAGGGCAGCGGTGAGCAGTaGTGCTGGGAAGGACTTGGACAGATCCAGTACGGTGAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SEASCVKGEKGSGEQ*CWEGLGQIQYGEVG
Trigger: GCCTACCTCACCGTACTGGATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCTGCCCTTCTCACCTTTGACACAGGATGCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 90 bp GCATCCTGTGTCAAAGGTGAGAAGGGCAGCGGTGAGCAGTGCTGCTaGGAAGGACTTGGACAGATCCAGTACGGTGAGGTAGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: ASCVKGEKGSGEQCC*EGLGQIQYGEVGKG
Trigger: CCCTTTGCCTACCTCACCGTACTGGATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCTGCCCTTCTCACCTTTGACACAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GCAGCCCACACGCAAAGCAGCACCCTAGCGCCCACTGCCCCTCCATCTTCCAAAAAGAGGCCAACAAATTaGACCCCTAAAGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AAHTQSSTLAPTAPPSSKKRPTN*TPKAPA
Trigger: CGCTGGTGCTTTAGGGGTCAAATTTGTTGGCCTCTT...TTTGGAAGATGGAGGGGCAGTGGGCGCTAGGGTGCTGCTTTGCGTGTGGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp GCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCCATCATTGTCCTTGGGTTaGAGGCCATTATTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: AGSGFPPHVSSYPGEKGPSLSLG*RPLFPR
Trigger: CCGGGGAAATAATGGCCTCAAACCCAAGGACAATGA...TGGCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp AAGCAGGCTCAGGATTCCCACCGCATGTATCCTCCTACCCAGGGGAGAAGGGGCTCCGCCAGAAGTCATTaGAGTCCCCTGTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: KQAQDSHRMYPPTQGRRGSARSH*SPLSHL
Trigger: TAAATGGGACAGGGGACTCAAATGACTTCTGGCGGA...GCCCCTTCTCCCCTGGGTAGGAGGATACATGCGGTGGGAATCCTGAGCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GAGGTAGAAGCTGTAGGCAGTTGTCAGAAGCAGGCTCAGGATTCCCACCGCATGGGCCAGTGCCAGGGCTaGGATGTGAACTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: EVEAVGSCQKQAQDSHRMGQCQG*DVNSLS
Trigger: GGACAATGAGTTCACATCCAAGCCCTGGCACTGGCC...CATGCGGTGGGAATCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGCCTCGCAGCAGCACCTaGGTCAGCCCTTGCAACTCT +
Preference number: 5 (lower is better)
Translates to: DWADVPSDTHACFPCASQPRSST*VSPCNS
Trigger: AGAGTTGCAAGGGCTGACCAAGGTGCTGCTGCGAGG...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp TTGTATCCCTCTCTGCATAGCCACAGCAATGGTGCTCCCCGAGAGGAGGTAGAGGCACAGGAGTTGTACTaGACCATGCTCAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LYPSLHSHSNGAPREEVEAQELY*TMLSMA
Trigger: GGCCATGCTGAGCATGGTCAAGTACAACTCCTGTGC...CTCTACCTCCTCTCGGGGAGCACCATTGCTGTGGCTATGCAGAGAGGGATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp AGTCAAAAGGCTGTAGCCACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTCGGAAGTCCGTGTCATaGGCCCCTGAGAAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SQKAVATGEDGQWVSDLIRKSVS*APEKRR
Trigger: CCTGCGCTTCTCAGGGGCCAATGACACGGACTTCCG...AATTAGATCTGAGACCCACTGACCATCCTCACCCGTGGCTACAGCCTTTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS CCA 90 bp GCCGCCATGATGAAGAACATCAGGATGGGGTCAAGGAGGATGTACTaGGATAGAGTGAGGCATCCTGTGTCAAAGGTGAGAAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: AAMMKNIRMGSRRMY*DRVRHPVSKVRRAA
Trigger: CGCTGCCCTTCTCACCTTTGACACAGGATGCCTCACTCTATCCCAGTACATCCTCCTTGACCCCATCCTGATGTTCTTCATCATGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GCCCATCAAGAAGAAAGGGAAGTAATGGAGCATCCATCCCAGGAGCAGCTGGCCAAGAGGCCAACAAATTaGACCCCTAAAGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AHQEEREVMEHPSQEQLAKRPTN*TPKAPA
Trigger: CGCTGGTGCTTTAGGGGTCAAATTTGTTGGCCTCTT...GGCCAGCTGCTCCTGGGATGGATGCTCCATTACTTCCCTTTCTTCTTGATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGAGAAGCTGTAGGCAGTaGTCAGAAGCAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: DWADVPSDTHACFPCASQRSCRQ*SEAGSG
Trigger: TCCTGAGCCTGCTTCTGACAACTGCCTACAGCTTCT...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS TCA 90 bp ATACGCCAGGTGTTCAGGGATAGAAGCATTGTGAAGGCTGTTCCCTaGAAGCCGGGCTTGAAAGGCAGAACTGAAGAAGCCATCACCAGG +
Preference number: 5 (lower is better)
Translates to: IRQVFRDRSIVKAVP*KPGLKGRTEEAITR
Trigger: CCTGGTGATGGCTTCTTCAGTTCTGCCTTTCAAGCCCGGCTTTCAGGGAACAGCCTTCACAATGCTTCTATCCCTGAACACCTGGCGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGAGTGTTCAACCCCACTaGCACGATGATAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: DWADVPSDTHACFPCASQSVQPH*HDDKEA
Trigger: GGCCTCTTTATCATCGTGCAAGTGGGGTTGAACACT...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GACTCTCAGGTTCCTGGGCTAGGGGACCAACCATCCCATAAGCCAGAGGGTGGAGTGAACTCATTGTCCTaGGGTTTGAGGCCATTATTT +
Preference number: 5 (lower is better)
Translates to: DSQVPGLGDQPSHKPEGGVNSLS*GLRPLF
Trigger: AAATAATGGCCTCAAACCCAAGGACAATGAGTTCAC...TCCACCCTCTGGCTTATGGGATGGTTGGTCCCCTAGCCCAGGAACCTGAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS TCA 90 bp CATGAACAGCAAAAATGGTCACATAGAGCACCAAAGGCAGCACTATaGGGCACAGGATGCGAGCAGTTAGGTGCTTCCCCACAGTCACCA +
Preference number: 5 (lower is better)
Translates to: HEQQKWSHRAPKAAL*GTGCEQLGASPQSP
Trigger: TGGTGACTGTGGGGAAGCACCTAACTGCTCGCATCCTGTGCCTCATAGTGCTGCCTTTGGTGCTCTATGTGACCATTTTTGCTGTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 90 bp GGCAGAATCTTTCCTGACGATCCCAGGACACAACCTGTGACCAAATaGATGAGGCGAATTCGACTTCTCAGTACCTTGATCCGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: GRIFPDDPRTQPVTK*MRRIRLLSTLIRFP
Trigger: TGGGAACCGGATCAAGGTACTGAGAAGTCGAATTCGCCTCATCCATTTGGTCACAGGTTGTGTCCTGGGATCGTCAGGAAAGATTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp ACACTTGGCTGCCACAGTTACATGGTCTACACACTCCAAAGGGACTGGGCAGATTCCGCCAGAAGTCATTaGAGTCCCCTGTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: TLGCHSYMVYTLQRDWADSARSH*SPLSHL
Trigger: TAAATGGGACAGGGGACTCAAATGACTTCTGGCGGA...ATCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp ACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTAGCTGCTCTGCCTTGCTCTTGGATGTGAACTCATaGTCCTTGGGTTTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TGEDGQWVSDLISCSALLLDVNS*SLGLRP
Trigger: TGGCCTCAAACCCAAGGACAATGAGTTCACATCCAA...GAGCAAGGCAGAGCAGCTAATTAGATCTGAGACCCACTGACCATCCTCACCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp ACACTCCAAAGGGACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTTGGATGTGAACTCATaGTCCTTGGGTTTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TLQRDWADVPSDTHACFPLDVNS*SLGLRP
Trigger: TGGCCTCAAACCCAAGGACAATGAGTTCACATCCAA...AGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTCCCTTTGGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 90 bp GAGTTAGTGGTTTCTTTTAGGTACGGAGTACAGGTAACTTCCAACTaGTCCCAGCCCCACTTAGGCAGAATCTTTCCTGACGATCCCAGG +
Preference number: 5 (lower is better)
Translates to: ELVVSFRYGVQVTSN*SQPHLGRIFPDDPR
Trigger: CCTGGGATCGTCAGGAAAGATTCTGCCTAAGTGGGGCTGGGAGCAGTTGGAAGTTACCTGTACTCCGTACCTAAAAGAAACCACTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GACTGGGCAGATGTACCCTCTGACACTCATGCCTGCTTTCCTTGTGCTTCACAGCGACTTCTCAGTACCTaGATCCGGTTCCCAAATTTT +
Preference number: 5 (lower is better)
Translates to: DWADVPSDTHACFPCASQRLLST*IRFPNF
Trigger: AAAATTTGGGAACCGGATCAAGGTACTGAGAAGTCG...CTGTGAAGCACAAGGAAAGCAGGCATGAGTGTCAGAGGGTACATCTGCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp GGTCCTGGCAGTGGCCTCAAAAGTCCCATGATTCCAGCCACCTCAGTCCTGCCATTTGGCAATTTGGGATaGATATGCTCTTCTATGTTC +
Preference number: 5 (lower is better)
Translates to: GPGSGLKSPMIPATSVLPFGNLG*ICSSMF
Trigger: GAACATAGAAGAGCATATCAATCCCAAATTGCCAAA...TGGCAGGACTGAGGTGGCTGGAATCATGGGACTTTTGAGGCCACTGCCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATGGCCAGTGCCAGGGCTaGGATGTGAACTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYGQCQG*DVNSLS
Trigger: GGACAATGAGTTCACATCCAAGCCCTGGCACTGGCC...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATACCTCAGTCCTGCCATaGGACTCTCAGGTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYTSVLP*DSQVPG
Trigger: CCCAGGAACCTGAGAGTCCAATGGCAGGACTGAGGT...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp CTGTTAGATGTCCCATGGGCTACCTTGTTAAAAGCCAAGCACAGATTCCTGTATGCACAGGAGTTGTACTaGACCATGCTCAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LLDVPWATLLKAKHRFLYAQELY*TMLSMA
Trigger: GGCCATGCTGAGCATGGTCAAGTACAACTCCTGTGC...ATACAGGAATCTGTGCTTGGCTTTTAACAAGGTAGCCCATGGGACATCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp AGGCAGCTCCCTTGGAGCTGGAAGGGTCCAGAATCTGGCTTCATAGCTGGGTGTTTTGGCAATTTGGGATaGATATGCTCTTCTATGTTC +
Preference number: 5 (lower is better)
Translates to: RQLPWSWKGPESGFIAGCFGNLG*ICSSMF
Trigger: GAACATAGAAGAGCATATCAATCCCAAATTGCCAAA...ACACCCAGCTATGAAGCCAGATTCTGGACCCTTCCAGCTCCAAGGGAGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp TGGCAACCACCTCCTGAAGATGCTTTAAAGAACTCTGACCCTGTCAGAGTCATTTCATTGTCCTTGGGTTaGAGGCCATTATTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: WQPPPEDALKNSDPVRVISLSLG*RPLFPR
Trigger: CCGGGGAAATAATGGCCTCAAACCCAAGGACAATGA...AATGACTCTGACAGGGTCAGAGTTCTTTAAAGCATCTTCAGGAGGTGGTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp ATAGCCAAGGTGTGTGTTCCACTCACCCAGTTCACAGAACAGGGACCAAAAACCGTGAACTCATTGTCCTaGGGTTTGAGGCCATTATTT +
Preference number: 5 (lower is better)
Translates to: IAKVCVPLTQFTEQGPKTVNSLS*GLRPLF
Trigger: AAATAATGGCCTCAAACCCAAGGACAATGAGTTCAC...GGTTTTTGGTCCCTGTTCTGTGAACTGGGTGAGTGGAACACACACCTTGGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS GCA 90 bp TCTCCAAACAGATGCCAGAGGTCTGAAATAGTGTTCAACCCCACTTaGACGATGATAAAGAGGCCAACAAATTTGACCCCTAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: SPNRCQRSEIVFNPT*TMIKRPTNLTPKAP
Trigger: TGGTGCTTTAGGGGTCAAATTTGTTGGCCTCTTTATCATCGTGCAAGTGGGGTTGAACACTATTTCAGACCTCTGGCATCTGTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp AGTCAAAAGGCTGTAGCCACGGGTGAGGATGGTCAGTGGGTCTCAGATCTAATTCTGATGTTTGGCAATTaGGGATTGATATGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SQKAVATGEDGQWVSDLILMFGN*GLICSS
Trigger: AGAAGAGCATATCAATCCCAAATTGCCAAACATCAG...AATTAGATCTGAGACCCACTGACCATCCTCACCCGTGGCTACAGCCTTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS-3UTR CAA 90 bp GGAAGTAGAGGATCCGGCCCATCAAGAAGAAAGGGAAGTAATGGAGCATCCATCCTGATGTTTGGCAATTaGGGATTGATATGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSRGSGPSRRKGSNGASILMFGN*GLICSS
Trigger: AGAAGAGCATATCAATCCCAAATTGCCAAACATCAG...GATGGATGCTCCATTACTTCCCTTTCTTCTTGATGGGCCGGATCCTCTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222634.2
CDS-3UTR CAA 90 bp CAACCACCTCCTGAAGATGCTTTAAAGAACTCTGACCCTGTCAGAGTCATTAAGCGACTTCTCAGTACCTaGATCCGGTTCCCAAATTTT +
Preference number: 5 (lower is better)
Translates to: QPPPEDALKNSDPVRVIKRLLST*IRFPNF
Trigger: AAAATTTGGGAACCGGATCAAGGTACTGAGAAGTCG...CTTAATGACTCTGACAGGGTCAGAGTTCTTTAAAGCATCTTCAGGAGGTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS CCA 72 bp CCGGGCCCCGGGCTCTGGGCGGGGCGGAAAGTGTGGTaGCCGCCCGGGCAGCTAAGAGGCGGCCTGAGGCGT +
Preference number: 6 (lower is better)
Translates to: PGPGLWAGRKVW*PPGQLRGGLRR
Trigger: ACGCCTCAGGCCGCCTCTTAGCTGCCCGGGCGGCCACCACACTTTCCGCCCCGCCCAGAGCCCGGGGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS CCA 72 bp GGGGACGCAGCTCGGAGCCCGCTAGGCCACCGCCTATaGCCGGCGGCATCCTCCCCTTCCGAAGGATCACCC +
Preference number: 6 (lower is better)
Translates to: GDAARSPLGHRL*PAASSPSEGSP
Trigger: GGGTGATCCTTCGGAAGGGGAGGATGCCGCCGGCCATAGGCGGTGGCCTAGCGGGCTCCGAGCTGCGTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS GCA 72 bp GCGCCGCGAGCTCCAAGCAGGCCGTTTAAGTTTCCGTaGTGCAGCCTGGGGGACCACGTCTCGGCTCACGGC +
Preference number: 6 (lower is better)
Translates to: APRAPSRPFKFP*CSLGDHVSAHG
Trigger: GCCGTGAGCCGAGACGTGGTCCCCCAGGCTGCAGCACGGAAACTTAAACGGCCTGCTTGGAGCTCGCGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 72 bp CCGCGAGCTCCAAGCAGGCCGTTTAAGTTTCCGTGCTaGAGCCTGGGGGACCACGTCTCGGCTCACGGCTCT +
Preference number: 6 (lower is better)
Translates to: PRAPSRPFKFPC*SLGDHVSAHGS
Trigger: AGAGCCGTGAGCCGAGACGTGGTCCCCCAGGCTGCAGCACGGAAACTTAAACGGCCTGCTTGGAGCTCGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 72 bp CTCCAAGCAGGCCGTTTAAGTTTCCGTGCTGCAGCCTaGGGGACCACGTCTCGGCTCACGGCTCTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LQAGRLSFRAAA*GTTSRLTALAA
Trigger: GGCTGCCAGAGCCGTGAGCCGAGACGTGGTCCCCCAGGCTGCAGCACGGAAACTTAAACGGCCTGCTTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 72 bp AGATGTGAGCAGGCTGGTCCAGCCGGTGAAAGCGGGTaGCAAAGGACAGCAGCGTCACCACAGCCAACGTGG +
Preference number: 6 (lower is better)
Translates to: RCEQAGPAGESG*QRTAASPQPTW
Trigger: CCACGTTGGCTGTGGTGACGCTGCTGTCCTTTGCCACCCGCTTTCACCGGCTGGACCAGCCTGCTCACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp GTGCTGCTGGGAAGGACTTGGACAGATCCAGTACGGTaGGGTAGGCAAAGGGGATCAGCCAGGAACCCAGGA +
Preference number: 6 (lower is better)
Translates to: VLLGRTWTDPVR*GRQRGSARNPG
Trigger: TCCTGGGTTCCTGGCTGATCCCCTTTGCCTACCTCACCGTACTGGATCTGTCCAAGTCCTTCCCAGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 72 bp CAGCAATGGTGCTCCCCGAGAGGAGGTAGAGGACAATaGTCACCAGATTCAGCCACCAGACCACAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: QQWCSPRGGRGQ*SPDSATRPQGC
Trigger: GCAACCCTGTGGTCTGGTGGCTGAATCTGGTGAGCATTGTCCTCTACCTCCTCTCGGGGAGCACCATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037788.6
CDS GCA 72 bp TCCTGTGTCAAAGGTGAGAAGGGCAGCGGTGAGCAGTaGTGCTGGGAAGGACTTGGACAGATCCAGTACGGT +
Preference number: 6 (lower is better)
Translates to: SCVKGEKGSGEQ*CWEGLGQIQYG
Trigger: ACCGTACTGGATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCTGCCCTTCTCACCTTTGACACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 72 bp GTCAAAGGTGAGAAGGGCAGCGGTGAGCAGTGCTGCTaGGAAGGACTTGGACAGATCCAGTACGGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: VKGEKGSGEQCC*EGLGQIQYGEV
Trigger: TACCTCACCGTACTGGATCTGTCCAAGTCCTTCCCAGCAGCACTGCTCACCGCTGCCCTTCTCACCTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp GAGCAGATAGACTCGGAAGTCCGTGTCATTGGCCCCTaGGAAGCGCAGGCCCTGATAATTGATAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: EQIDSEVRVIGP*EAQALIIDRPV
Trigger: CACTGGCCTATCAATTATCAGGGCCTGCGCTTCTCAGGGGCCAATGACACGGACTTCCGAGTCTATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 72 bp GGGGCAGAGAAAGGCCTGTTAGCACAGGAGTTGTACTaGACCATGCTCAGCATGGCCGCCATGATGAAGAAC +
Preference number: 6 (lower is better)
Translates to: GAEKGLLAQELY*TMLSMAAMMKN
Trigger: GTTCTTCATCATGGCGGCCATGCTGAGCATGGTCAAGTACAACTCCTGTGCTAACAGGCCTTTCTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 72 bp GGCCAGTGCCAGGGCTTGGATGTGAACTCATTGTCCTaGGGTTTGAGGCCATTATTTCCCCGGATCATGACC +
Preference number: 6 (lower is better)
Translates to: GQCQGLDVNSLS*GLRPLFPRIMT
Trigger: GGTCATGATCCGGGGAAATAATGGCCTCAAACCCAAGGACAATGAGTTCACATCCAAGCCCTGGCACTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp CAACTGCTCCCAGCCCCACTTAGGCAGAATCTTTCCTaGCGATCCCAGGACACAACCTGTGACCAAATGGAT +
Preference number: 6 (lower is better)
Translates to: QLLPAPLRQNLS*RSQDTTCDQMD
Trigger: ATCCATTTGGTCACAGGTTGTGTCCTGGGATCGTCAGGAAAGATTCTGCCTAAGTGGGGCTGGGAGCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp CAAAAATGGTCACATAGAGCACCAAAGGCAGCACTATaGGGCACAGGATGCGAGCAGTTAGGTGCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: QKWSHRAPKAAL*GTGCEQLGASP
Trigger: TGGGGAAGCACCTAACTGCTCGCATCCTGTGCCTCATAGTGCTGCCTTTGGTGCTCTATGTGACCATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp GTGTTCAGGGATAGAAGCATTGTGAAGGCTGTTCCCTaGAAGCCGGGCTTGAAAGGCAGAACTGAAGAAGCC +
Preference number: 6 (lower is better)
Translates to: VFRDRSIVKAVP*KPGLKGRTEEA
Trigger: GGCTTCTTCAGTTCTGCCTTTCAAGCCCGGCTTTCAGGGAACAGCCTTCACAATGCTTCTATCCCTGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp GGTTTGAGGCCATTATTTCCCCGGATCATGACCATGTaGGACTCCAGCAAGATCTCAGGAAAACTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GLRPLFPRIMTM*DSSKISGKLGC
Trigger: GCAGCCCAGTTTTCCTGAGATCTTGCTGGAGTCTCACATGGTCATGATCCGGGGAAATAATGGCCTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 90 bp ATAGTGTTCAACCCCACTTGCACGATGATAAAGAGGCCAACAAATTaGACCCCTAAAGCACCAGCGAGACTAATGCCAGTCAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: IVFNPTCTMIKRPTN*TPKAPARLMPVRLS
Trigger: GCTCAGCCTGACTGGCATTAGTCTCGCTGGTGCTTTAGGGGTCAAATTTGTTGGCCTCTTTATCATCGTGCAAGTGGGGTTGAACACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 72 bp GTTTCTTTTAGGTACGGAGTACAGGTAACTTCCAACTaGTCCCAGCCCCACTTAGGCAGAATCTTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: VSFRYGVQVTSN*SQPHLGRIFPD
Trigger: GTCAGGAAAGATTCTGCCTAAGTGGGGCTGGGAGCAGTTGGAAGTTACCTGTACTCCGTACCTAAAAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CCA 72 bp TTTCCTGACGATCCCAGGACACAACCTGTGACCAAATaGATGAGGCGAATTCGACTTCTCAGTACCTTGATC +
Preference number: 6 (lower is better)
Translates to: FPDDPRTQPVTK*MRRIRLLSTLI
Trigger: GATCAAGGTACTGAGAAGTCGAATTCGCCTCATCCATTTGGTCACAGGTTGTGTCCTGGGATCGTCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS GCA 72 bp AGATGCCAGAGGTCTGAAATAGTGTTCAACCCCACTTaGACGATGATAAAGAGGCCAACAAATTTGACCCCT +
Preference number: 6 (lower is better)
Translates to: RCQRSEIVFNPT*TMIKRPTNLTP
Trigger: AGGGGTCAAATTTGTTGGCCTCTTTATCATCGTGCAAGTGGGGTTGAACACTATTTCAGACCTCTGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp AGAAGCCATCACCAGGACCACTTTTATTCAGCACCATaGCATGAACAGCAAAAATGGTCACATAGAGCACCA +
Preference number: 6 (lower is better)
Translates to: RSHHQDHFYSAP*HEQQKWSHRAP
Trigger: TGGTGCTCTATGTGACCATTTTTGCTGTTCATGTCATGGTGCTGAATAAAAGTGGTCCTGGTGATGGCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS TCA 72 bp TTTTCTATTTACAACTTCAATCCGCCAGAAGTCATTTaGGTCCCCTGTCCCATTTATGCCATAGCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: FSIYNFNPPEVI*VPCPIYAIASD
Trigger: GTCACTGGCTATGGCATAAATGGGACAGGGGACTCAAATGACTTCTGGCGGATTGAAGTTGTAAATAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 72 bp TGCAGCACATCCAGGCTGATGTTTGGCAATTTGGGATaGATATGCTCTTCTATGTTCCAAATGGAGTTAGTG +
Preference number: 6 (lower is better)
Translates to: CSTSRLMFGNLG*ICSSMFQMELV
Trigger: CACTAACTCCATTTGGAACATAGAAGAGCATATCAATCCCAAATTGCCAAACATCAGCCTGGATGTGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 90 bp AAACTGGGCTGCAGCACATCCAGGCTGATGTTTGGCAATTTGGGATaGATATGCTCTTCTATGTTCCAAATGGAGTTAGTGGTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: KLGCSTSRLMFGNLG*ICSSMFQMELVVSF
Trigger: AAAAGAAACCACTAACTCCATTTGGAACATAGAAGAGCATATCAATCCCAAATTGCCAAACATCAGCCTGGATGTGCTGCAGCCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2
CDS CAA 72 bp ACCAAATGGATGAGGCGAATTCGACTTCTCAGTACCTaGATCCGGTTCCCAAATTTTCTATTTACAACTTCA +
Preference number: 6 (lower is better)
Translates to: TKWMRRIRLLST*IRFPNFLFTTS
Trigger: TGAAGTTGTAAATAGAAAATTTGGGAACCGGATCAAGGTACTGAGAAGTCGAATTCGCCTCATCCATTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037788.6
ENSMUST00000222634.2