Pregenerated sensors for POMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039254Ensembl transcript IDs: ENSMUST00000036473.16, ENSMUST00000123740.3, ENSMUST00000132516.9, ENSMUST00000146485.8, ENSMUST00000192998.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAGCAGGGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTGACCTaGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTGGGTGATGCGG | + |
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Preference number: 1 (lower is better) Translates to: SQQGKGLPETLFRVT*EPKATSRGWPWVMR Trigger: CCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAGCGTCTCTGGCAAACCCTTGCCCTGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 90 bp | GTGCCCCTCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTaGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: VPLLPWWFLHWQLKL*LGQSWASWVTLWLG Trigger: GCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR TCA 90 bp | GGGGCTGCGACATCGTGCGTGTTAAGGAGGCGGGTGGTCATGCCGTaGACGAGCTGTACAATGTCTCCATGTCTTACAGGCCGGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GAATSCVLRRRVVMP*TSCTMSPCLTGRGG Trigger: CCCTCCCCGGCCTGTAAGACATGGAGACATTGTACAGCTCGTTCACGGCATGACCACCCGCCTCCTTAACACGCACGATGTCGCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 90 bp | TCCTTCCCTGGCTGGGTGCCCCTCCTGCCTTGGTGGTTCCTACACTaGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTA | + |
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Preference number: 1 (lower is better) Translates to: SFPGWVPLLPWWFLH*QLKLWLGQSWASWV Trigger: TACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAGCCAGGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | ACGCTCTTCAGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCAAGCCCTCCCTTGTTAATTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: TLFRVTWEPKATSRG*PWVMRASPPLLIAD Trigger: GTCTGCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR TCA 90 bp | CACTGGTCCTGGGATGTAGCCAATAGGCGATGTTGGTGTCCAGCGTaGGCCACTCCAGCGGGGTGGAGCTGTACTGGTGTTCCAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: HWSWDVANRRCWCPA*ATPAGWSCTGVPSP Trigger: AGGACTTGGAACACCAGTACAGCTCCACCCCGCTGGAGTGGCTCACGCTGGACACCAACATCGCCTATTGGCTACATCCCAGGACCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR GCA 90 bp | GGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTaGCCAATGAGGTGTGGCACTGTGGGCCCCATAAATGACAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GWLAAFRVYRGWLCL*PMRCGTVGPINDRA Trigger: AGCCCTGTCATTTATGGGGCCCACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | TCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTaGCTGTGCCTGTGCCCAATGAGGTGTGGCACTGTGGGCCCCATA | + |
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Preference number: 1 (lower is better) Translates to: SGVCGWLAAFRVYRG*LCLCPMRCGTVGPI Trigger: TATGGGGCCCACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR GCA 90 bp | GTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTaGCTGTGCCCAATGAGGTGTGGCACTGTGGGCCCCATAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: VCGWLAAFRVYRGWL*LCPMRCGTVGPIND Trigger: GTCATTTATGGGGCCCACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | TTCAGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTaGGTGATGCGGGCAAGCCCTCCCTTGTTAATTGCAGACTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: FRVTWEPKATSRGWP*VMRASPPLLIADFL Trigger: AAGGAAGTCTGCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 90 bp | GTCTCCCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTaGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: VSQDSLELAQESVDG*QLSGFTEGGCACAQ Trigger: TTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | TGCAGTCTCCCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATaGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: CSLPGLFRVGSGVCG*LAAFRVYRGWLCLC Trigger: GCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGGGAGACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | CTTGAGGTGAAATTGGAATTAGTCCCTGGAGTTCCTCCTGGACCCTaGCAGTCCTGCCTGCTGAGGCTCCTGTTGGTGGGAGACAAACAC | + |
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Preference number: 1 (lower is better) Translates to: LEVKLELVPGVPPGP*QSCLLRLLLVGDKH Trigger: GTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCAGGACTGCCAGGGTCCAGGAGGAACTCCAGGGACTAATTCCAATTTCACCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | ATGTTGGTGTCCAGCGTGAGCCACTCCAGCGGGGTGGAGCTGTACTaGTGTTCCAAGTCCTCATTCTTCAGCGTCAGCATCTTCCACTGT | + |
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Preference number: 1 (lower is better) Translates to: MLVSSVSHSSGVELY*CSKSSFFSVSIFHC Trigger: ACAGTGGAAGATGCTGACGCTGAAGAATGAGGACTTGGAACACCAGTACAGCTCCACCCCGCTGGAGTGGCTCACGCTGGACACCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR GCA 90 bp | GCTCATGGCTTTTGCCATACCGGTGTTCTTCCACATTCCACACCATaGTCTCGTGGTAGCCCGGTGACAACTTCTCCCCAACTACCTCCA | + |
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Preference number: 1 (lower is better) Translates to: AHGFCHTGVLPHSTP*SRGSPVTTSPQLPP Trigger: TGGAGGTAGTTGGGGAGAAGTTGTCACCGGGCTACCACGAGAGCATGGTGTGGAATGTGGAAGAACACCGGTATGGCAAAAGCCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR CCA 90 bp | GCCGGCGGAGCAGGTACCAGAAGAAGAGTAGAGTGTAGACCACTGTaGCAAGGCTGGCTGAAGTCCAGATCACAATGTTCCCAAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: AGGAGTRRRVECRPL*QGWLKSRSQCSQAS Trigger: ACTTGCTTGGGAACATTGTGATCTGGACTTCAGCCAGCCTTGCCACAGTGGTCTACACTCTACTCTTCTTCTGGTACCTGCTCCGCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR GCA 90 bp | AAATTGGAATTAGTCCCTGGAGTTCCTCCTGGACCCTGGCAGTCCTaGCTGCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: KLELVPGVPPGPWQS*LLRLLLVGDKHIFE Trigger: CTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCAGGACTGCCAGGGTCCAGGAGGAACTCCAGGGACTAATTCCAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CCA 90 bp | ATGTCTCCATGTCTTACAGGCCGGGGAGGGTTGTTTACCACCAGCTaGTGTCGCCCAGGATCCTTGACGATCCACCAGTTATTGATGTCT | + |
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Preference number: 1 (lower is better) Translates to: MSPCLTGRGGLFTTS*CRPGSLTIHQLLMS Trigger: AGACATCAATAACTGGTGGATCGTCAAGGATCCTGGGCGACACCAGCTGGTGGTAAACAACCCTCCCCGGCCTGTAAGACATGGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 90 bp | GCAGGTACCAGAAGAAGAGTAGAGTGTAGACCACTGTGGCAAGGCTaGCTGAAGTCCAGATCACAATGTTCCCAAGCAAGTGGATCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AGTRRRVECRPLWQG*LKSRSQCSQASGSE Trigger: CTCAGATCCACTTGCTTGGGAACATTGTGATCTGGACTTCAGCCAGCCTTGCCACAGTGGTCTACACTCTACTCTTCTTCTGGTACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR CCA 90 bp | ACTCTCTGTTCACAATGTCCAGTTTCCAGAGGTTCTGGGCAGGCATaGAGATGTTATAGTCAATGTAGCAGGAGACTTCTTGAGAATGGG | + |
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Preference number: 1 (lower is better) Translates to: TLCSQCPVSRGSGQA*RCYSQCSRRLLENG Trigger: CCCATTCTCAAGAAGTCTCCTGCTACATTGACTATAACATCTCCATGCCTGCCCAGAACCTCTGGAAACTGGACATTGTGAACAGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCCAACTGCCGGAACCCCCAGTCAGGGAGGTGAGCCCCGCTCAGCTTCATCCAGGGGCTGGCCTTaGGTGATGCGGGCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LPPTAGTPSQGGEPRSASSRGWP*VMRASP Trigger: AGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGA...TGAAGCTGAGCGGGGCTCACCTCCCTGACTGGGGGTTCCGGCAGTTGGAGGTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGGCCGGGGAGGGTTGTTTACCACCAGCTGGTGTCGCCCAGGATCCTTGACGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YRPGRVVYHQLVSPRILDATSRG*PWVMRA Trigger: TGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGC...GTCAAGGATCCTGGGCGACACCAGCTGGTGGTAAACAACCCTCCCCGGCCTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CCA 90 bp | GGAACCCCCAGTCAGGGAGGTGAGCCCCGCTCAGCTTCAAGATGGCGGATGTGTCAGGTCACCTGTTGCTaGTGGGAGCTGCCACGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GTPSQGGEPRSASRWRMCQVTCC*WELPRP Trigger: TGGCCGTGGCAGCTCCCACCAGCAACAGGTGACCTG...ACACATCCGCCATCTTGAAGCTGAGCGGGGCTCACCTCCCTGACTGGGGGTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTCCCTGGAGTTCCTCCTaGACCCTGGCAGTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AAQTLAGSELGLMGNAVAPWSSS*TLAVLP Trigger: AGGCAGGACTGCCAGGGTCCAGGAGGAACTCCAGGG...AGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR-3UTR CCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATCACTCCTTCCCTGGCTaGGTGCCCCTCCTGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNHSFPG*VPLLPW Trigger: CCAAGGCAGGAGGGGCACCCAGCCAGGGAAGGAGTG...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGCAGTCCTGCCTGCTaGGGCTCCTGTTGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SCLGGSYTGSSNSGWVRVGSPAC*GSCWWE Trigger: CTCCCACCAACAGGAGCCTCAGCAGGCAGGACTGCC...AACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CAA 90 bp | CTTCAGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTaGGGTGATGCGGGCAAGCCCTCCCTTGTTAATTGCAGACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQSDLGTKGHLQGLA*GDAGKPSLVNCRLP Trigger: AGGAAGTCTGCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR GCA 90 bp | GAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGCTGGGTGCCCCTCCTaGCTTGGTGGTTCCTACACT | + |
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Preference number: 2 (lower is better) Translates to: ELAQESVDGWQLSGFTEGAGCPS*LGGSYT Trigger: AGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAGC...ACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CAA 90 bp | CTGGGCAGGCATGGAGATGTTATAGTCAATGTAGCAGGAGACTTCTaGAGAATGGGGGCTCAGTGGGGCTGCGACATCGTGCGTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LGRHGDVIVNVAGDF*RMGAQWGCDIVRVK Trigger: CTTAACACGCACGATGTCGCAGCCCCACTGAGCCCCCATTCTCAAGAAGTCTCCTGCTACATTGACTATAACATCTCCATGCCTGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR GCA 90 bp | GGTAACGCTGTGGCTGGGCACATTCTTCACTGTGTGAAGAGAAATCAATTGCTTGGACCCTGGCAGTCCTaGCTGCTGAGGCTCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GNAVAGHILHCVKRNQLLGPWQS*LLRLLL Trigger: CAACAGGAGCCTCAGCAGGCAGGACTGCCAGGGTCC...AAGCAATTGATTTCTCTTCACACAGTGAAGAATGTGCCCAGCCACAGCGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR CAA 90 bp | ATTGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTGAGGTGAAATaGGAATTAGTCCCTGGAGTTCCTCCTGGACCCTGGCAGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: IASNKEPVDRALEVK*ELVPGVPPGPWQSC Trigger: GCAGGACTGCCAGGGTCCAGGAGGAACTCCAGGGACTAATTCCAATTTCACCTCAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR-3UTR TCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATAGACAAACACATCTTTaGGGCTTTGTCCTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNRQTHL*GFVLCA Trigger: AGCACACAGGACAAAGCCTCAAAGATGTGTTTGTCT...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTGGGCAGGCATGGAGATGTTATAGTCAATGTAGCAGGAGACTTCTTGAGCTCTTCAGAGTGACCTaGGAACCAAAGGCCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: GSGQAWRCYSQCSRRLLELFRVT*EPKATS Trigger: GGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAG...CTCAAGAAGTCTCCTGCTACATTGACTATAACATCTCCATGCCTGCCCAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CAA 90 bp | TGTACAAAGCGCACTTCCGACAAGATAGTCTTCCAGGTATCCCGGTaGGACTCTCTGTTCACAATGTCCAGTTTCCAGAGGTTCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: CTKRTSDKIVFQVSR*DSLFTMSSFQRFWA Trigger: TGCCCAGAACCTCTGGAAACTGGACATTGTGAACAGAGAGTCCAACCGGGATACCTGGAAGACTATCTTGTCGGAAGTGCGCTTTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTACTGGTGTTCCAAGTCCTCATTCTTCAGCGTCAGCATCTTCCACTGTAAGCTCCCTCTCCTTCTaGTCATGGCTTTTGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: SCTGVPSPHSSASASSTVSSLSF*SWLLPY Trigger: GTATGGCAAAAGCCATGAGCAGAAGGAGAGGGAGCT...TACAGTGGAAGATGCTGACGCTGAAGAATGAGGACTTGGAACACCAGTACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAACGCTGTGGCTGGGCACATTCTTCACTGTGTGAAGAGAAATCAATTGCTTAGTGGACAGGGCTCTTaGGGTGAAATTGGAATTAGT | + |
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Preference number: 2 (lower is better) Translates to: GNAVAGHILHCVKRNQLLSGQGS*GEIGIS Trigger: ACTAATTCCAATTTCACCTCAAGAGCCCTGTCCACT...AAGCAATTGATTTCTCTTCACACAGTGAAGAATGTGCCCAGCCACAGCGTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGTGTCGCCCAGGATCCTTGACGATCCACCAGTTATTGATGTCTTTGAACATTCTCATATATCATaGGATAGGTGTTCTTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: QLVSPRILDDPPVIDVFEHSHIS*DRCSCA Trigger: CGCACAAGAACACCTATCCCATGATATATGAGAATG...TTCAAAGACATCAATAACTGGTGGATCGTCAAGGATCCTGGGCGACACCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGTGCGAATGAAGCCAGCAGGGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTCTCCAGGGGCTGGCCTaGGGTGATGCGGGCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LVRMKPAGQGFARDALQSLQGLA*GDAGKP Trigger: GGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAG...ACTCTGAAGAGCGTCTCTGGCAAACCCTTGCCCTGCTGGCTTCATTCGCACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR TCA 72 bp | AGCAGGGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTaGCCTGGGAACCAAAGGCCACCTCCAGGGGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SRARVCQRRSSE*PGNQRPPPGAG Trigger: GCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAGCGTCTCTGGCAAACCCTTGCCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 72 bp | AGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCAAGCCCTCCCTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RVTWEPKATSRG*PWVMRASPPLL Trigger: TAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 72 bp | GGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTGACCTaGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GKGLPETLFRVT*EPKATSRGWPW Trigger: CCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAGCGTCTCTGGCAAACCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGGGTGCCCCTCCTGCCTaGGTGGTTCCTACACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWGAPPA*VVPTLA Trigger: TGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACC...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR TCA 72 bp | ACTACCTCCAACTGCCGGAACCCCCAGTCAGGGAGGTaGGCCCCGCTCAGCTTCAAGATGGCGGATGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: TTSNCRNPQSGR*APLSFKMADVF Trigger: GAACACATCCGCCATCTTGAAGCTGAGCGGGGCTCACCTCCCTGACTGGGGGTTCCGGCAGTTGGAGGTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR CCA 72 bp | ACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTaGGTGATGCGGGCAAGCCCTCCCTTGTTAATTGCA | + |
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Preference number: 3 (lower is better) Translates to: TWEPKATSRGWP*VMRASPPLLIA Trigger: TGCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
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| 3UTR GCA 72 bp | TTAGTCCCTGGAGTTCCTCCTGGACCCTGGCAGTCCTaGCTGCTGAGGCTCCTGTTGGTGGGAGACAAACAC | + |
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Preference number: 3 (lower is better) Translates to: LVPGVPPGPWQS*LLRLLLVGDKH Trigger: GTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCAGGACTGCCAGGGTCCAGGAGGAACTCCAGGGACTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| 3UTR TCA 72 bp | TGGGATGTAGCCAATAGGCGATGTTGGTGTCCAGCGTaGGCCACTCCAGCGGGGTGGAGCTGTACTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: WDVANRRCWCPA*ATPAGWSCTGV Trigger: AACACCAGTACAGCTCCACCCCGCTGGAGTGGCTCACGCTGGACACCAACATCGCCTATTGGCTACATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| 3UTR CCA 72 bp | CTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTaGGCCTCATGGGTAACGCTGTGGCTGGGCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LHWQLKLWLGQS*ASWVTLWLGTF Trigger: GAATGTGCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CCA 72 bp | TGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTaGCTGTGCCTGTGCCCAATGAGGTGTGGCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CGWLAAFRVYRG*LCLCPMRCGTV Trigger: CACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CCA 72 bp | CCCAGTCAGGGAGGTGAGCCCCGCTCAGCTTCAAGATaGCGGATGTGTTCACATGTACAAAGCGCACTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: PSQGGEPRSASR*RMCSHVQSALP Trigger: CGGAAGTGCGCTTTGTACATGTGAACACATCCGCCATCTTGAAGCTGAGCGGGGCTCACCTCCCTGACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| 3UTR CCA 72 bp | TCCAGCGTGAGCCACTCCAGCGGGGTGGAGCTGTACTaGTGTTCCAAGTCCTCATTCTTCAGCGTCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSVSHSSGVELY*CSKSSFFSVSI Trigger: GATGCTGACGCTGAAGAATGAGGACTTGGAACACCAGTACAGCTCCACCCCGCTGGAGTGGCTCACGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
||
| 3UTR GCA 72 bp | GCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTaGCCAATGAGGTGTGGCACTGTGGGCCCCATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AAFRVYRGWLCL*PMRCGTVGPIN Trigger: ATTTATGGGGCCCACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CCA 72 bp | CAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATaGGTAACGCTGTGGCTGGGCACATTCTTCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLKLWLGQSWAS*VTLWLGTFFTV Trigger: CACAGTGAAGAATGTGCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGCGAATGAAGCCAGCAGGGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTGTCATGTGCACGGGCTaGAGTCTGTCTCATGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVRMKPAGQGFARDALQSVMCTG*SLSHEV Trigger: CACCTCATGAGACAGACTCAAGCCCGTGCACATGAC...ACTCTGAAGAGCGTCTCTGGCAAACCCTTGCCCTGCTGGCTTCATTCGCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGGGCAAGGGTTTGCCAGAGACGCTCTTCAGAGTGACCTGGGAACCAAACGGGCAAGCCCTCCCTaGTTAATTGCAGACTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PAGQGFARDALQSDLGTKRASPP*LIADFL Trigger: AAGGAAGTCTGCAATTAACAAGGGAGGGCTTGCCCG...TTTGGTTCCCAGGTCACTCTGAAGAGCGTCTCTGGCAAACCCTTGCCCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| 3UTR CCA 72 bp | GACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTaGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DSLELAQESVDG*QLSGFTEGGCA Trigger: GGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CCA 72 bp | CCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATaGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLFRVGSGVCG*LAAFRVYRGWL Trigger: CAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR TCA 72 bp | ACATCGTGCGTGTTAAGGAGGCGGGTGGTCATGCCGTaGACGAGCTGTACAATGTCTCCATGTCTTACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSCVLRRRVVMP*TSCTMSPCLTG Trigger: GCCTGTAAGACATGGAGACATTGTACAGCTCGTTCACGGCATGACCACCCGCCTCCTTAACACGCACGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| 3UTR CCA 72 bp | CAATGTTCCCAAGCAAGTGGATCTGAGCACTGGTCCTaGGATGTAGCCAATAGGCGATGTTGGTGTCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: QCSQASGSEHWS*DVANRRCWCPA Trigger: CGCTGGACACCAACATCGCCTATTGGCTACATCCCAGGACCAGTGCTCAGATCCACTTGCTTGGGAACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
||
| 3UTR GCA 72 bp | TTTTGCCATACCGGTGTTCTTCCACATTCCACACCATaGTCTCGTGGTAGCCCGGTGACAACTTCTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FCHTGVLPHSTP*SRGSPVTTSPQ Trigger: TTGGGGAGAAGTTGTCACCGGGCTACCACGAGAGCATGGTGTGGAATGTGGAAGAACACCGGTATGGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132516.9 ENSMUST00000192998.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTCACATCTTTGAGGCTTaGTCCTGTGTGCTTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLGGSYTGSSNSGWVRVHIFEA*SCVLVF Trigger: GAAGACAAGCACACAGGACAAAGCCTCAAAGATGTG...AACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGGAGACAAACACATCTTaGAGGCTTTGTCCTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QDSLELAQESVDGWQLSGETNTS*RLCPVC Trigger: GCACACAGGACAAAGCCTCAAAGATGTGTTTGTCTC...CCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR-3UTR CAA 90 bp | CCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTCTTGAGGTGAAATaGGAATTAGTCCCTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTLAAQTLAGSELGLMGNALEVK*ELVPGV Trigger: AACTCCAGGGACTAATTCCAATTTCACCTCAAGAGC...GTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR TCA 72 bp | GCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTaGGGCTTTGTCCTGTGTGCTTGTCTTCTGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AEAPVGGRQTHL*GFVLCACLLCS Trigger: AGAACACAGAAGACAAGCACACAGGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR TCA 72 bp | AATTGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTaGGGTGAAATTGGAATTAGTCCCTGGAGTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NCFKQGTSGQGS*GEIGISPWSSS Trigger: GGAGGAACTCCAGGGACTAATTCCAATTTCACCTCAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR TCA 72 bp | TGGGTAACGCTGTGGCTGGGCACATTCTTCACTGTGTaGAGAGAAATCAATTGCTTCAAACAAGGAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WVTLWLGTFFTV*REINCFKQGTS Trigger: ACTGGTTCCTTGTTTGAAGCAATTGATTTCTCTTCACACAGTGAAGAATGTGCCCAGCCACAGCGTTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR TCA 72 bp | ATTTGTCCTGTTTTATTTACATTAAAGGTAAGGAAGTaGATGGACGACACCTTGGCCGTGGCAGTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ICPVLFTLKVRK*MDDTLAVAVRW Trigger: CCACCTAACTGCCACGGCCAAGGTGTCGTCCATTCACTTCCTTACCTTTAATGTAAATAAAACAGGACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQTLAGSELGLMGNAVAATSRG*PWVMRA Trigger: TGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGC...AGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGCCCCAGTCAGGGAGGTaGGCCCCGCTCAGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWPQSGR*APLSFK Trigger: CTTGAAGCTGAGCGGGGCTCACCTCCCTGACTGGGG...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGTCCAGGGGCTGGCCTTaGGTGATGCGGGCAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWSRGWP*VMRASP Trigger: AGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGA...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | GACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTaGGGTGATGCGGGCAAGCCCTCCCTTGTTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLGTKGHLQGLA*GDAGKPSLVNC Trigger: GCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGCCCCTCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGGGGCTCAGTGGGGCTaGGACATCGTGCGTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAPPALVVPTLAAQTLAGAQWG*DIVRVK Trigger: CTTAACACGCACGATGTCGCAGCCCCACTGAGCCCC...AGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGCTATCTGGTAGGCCATaGGCACTGACAGGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGVCGWLAAFRVYRGWLLSGRP*ALTGPR Trigger: CCGGGGCCCTGTCAGTGCCCATGGCCTACCAGATAG...CAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | AGGGGCTGGCCTTGGGTGATGCGGGCAAGCCCTCCCTaGTTAATTGCAGACTTCCTTGTTAGGGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGWPWVMRASPP*LIADFLVRGAQ Trigger: CTGAGCGCCCCTAACAAGGAAGTCTGCAATTAACAAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGGGCGTGTTCTTGTGCGAATaGAGCCAGCAGGGCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKLWLGQSWASWVTLWLGVFLCE*SQQGKG Trigger: ACCCTTGCCCTGCTGGCTTCATTCGCACAAGAACAC...GCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGGCAGGATCTGGAAGGTaGGTGCCGGCAAGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWAGSGR*VPASSG Trigger: ACCACTACTTGCCGGCACTCACCTTCCAGATCCTGC...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCGTGGACAGCTGCAATaGCGAGCACAAGCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVDGWQLSGFTEGGCACARGQLQ*RAQAGR Trigger: CCTACCTGCTTGTGCTCGGCATTGCAGCTGTCCACG...GGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTCCCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGGCAGGGCGGCTCCAATaGCAGCACCGTGGGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSQDSLELAQESVDGWQAGRLQ*QHRGKS Trigger: ACTTTTCCCACGGTGCTGCCATTGGAGCCGCCCTGC...CTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGGGAGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGCCCCTCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTCCCTCCAAGCTGGCCTaGAAGGCACTGGACATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPPALVVPTLAAQTLAPSKLA*KALDMI Trigger: AATCATGTCCAGTGCCTTCCAGGCCAGCTTGGAGGG...AGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGCCCCTCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTCTCTTCAGAGTGACCTaGGAACCAAAGGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGAPPALVVPTLAAQTLALFRVT*EPKATS Trigger: GGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAG...AGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAGGGAGGTCACAGATGCTCCTTCGCCGGCGGAGCAGGTACCAGAAGAACAGAACCTGTCAGCCTaGGGGGCAGTTTCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILREVTDAPSPAEQVPEEQNLSA*GAVSRG Trigger: ACCTCTGGAAACTGCCCCCCAGGCTGACAGGTTCTG...TTCTTCTGGTACCTGCTCCGCCGGCGAAGGAGCATCTGTGACCTCCCTGAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGCCCCTCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGAGCACGCGCATATTTaGCAAGGTCTGGTCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPPALVVPTLAAQTLAEHAHI*QGLVSD Trigger: ATCGGAGACCAGACCTTGTCAAATATGCGCGTGCTC...AGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGAGGGGCACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGCCAAGCAAGTGGATCTaGGCACTGGTCCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGVCGWLAAFRVYRGWLPSKWI*ALVLGC Trigger: ACATCCCAGGACCAGTGCTCAGATCCACTTGCTTGG...CAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCAGCCACAGCCACCAGTaGACTGAGAAAGGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVDGWQLSGFTEGGCACASHSHQ*TEKGLC Trigger: ACACAGCCCTTTCTCAGTGCACTGGTGGCTGTGGCT...GGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTCCCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCCACATTCCACACCATaGTCTCGTGGTAGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVSQDSLELAQESVDGWQPHSTP*SRGSPV Trigger: CACCGGGCTACCACGAGAGCATGGTGTGGAATGTGG...CTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGGGAGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTGAGGCTTTGTCCCAGGTCACCTGTTGCTaGTGGGAGCTGCCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLRLLLVGDKHIFEALSQVTCC*WELPRP Trigger: TGGCCGTGGCAGCTCCCACCAGCAACAGGTGACCTG...GGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | CCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTaGGGCCTCATGGGTAACGCTGTGGCTGGGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: PTLAAQTLAGSE*GLMGNAVAGHI Trigger: AATGTGCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTGAGGCTTTGTCCTCAGGGCGTTCTCAATaGGCATCAGCAGGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLRLLLVGDKHIFEALSSGRSQ*ASAGRL Trigger: GAGCCGCCCTGCTGATGCTCATTGAGAACGCCCTGA...GGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTCAGCCACCAGTGCACTaGGAAAGGGCTGTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELAQESVDGWQLSGFTEGQPPVH*ERAVCL Trigger: CAGACACACAGCCCTTTCTCAGTGCACTGGTGGCTG...ACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATCGGGTGGTCATGCCGTaGACGAGCTGTACAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNRVVMP*TSCTMS Trigger: AGACATTGTACAGCTCGTTCACGGCATGACCACCCG...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | CTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGGGCTGTGGCAAGGCTGGCTaGAGTCCAGATCACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLWLGQSWASWVTLWLGCGKAG*SPDHNV Trigger: AACATTGTGATCTGGACTTCAGCCAGCCTTGCCACA...GCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGGTTGCTGGTGGGAGCTaGCACGGCCATTCTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWVAGGS*HGHSHI Trigger: TATATGAGAATGGCCGTGGCAGCTCCCACCAGCAAC...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | CCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACAAGGCCAGTAGCATGTaGCCAAATGGTGGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLAAQTLAGSELGLMGNKASSM*PNGGPL Trigger: CAGTGGGCCACCATTTGGCCACATGCTACTGGCCTT...GTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGCACTGGACATGATTTaGTCATGGGGCCCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELAQESVDGWQLSGFTEGALDMI*SWGPER Trigger: CCGCTCTGGGCCCCATGACCAAATCATGTCCAGTGC...ACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGGGGTGGAGCTGTACTaGTGTTCCAAGTCCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AAQTLAGSELGLMGNAVAGVELY*CSKSSF Trigger: GAATGAGGACTTGGAACACCAGTACAGCTCCACCCC...AGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTGAGGCTTTGTCCGGAAGGCACTGGACATaGTTTGGTCATGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLRLLLVGDKHIFEALSGRHWT*FGHGAQ Trigger: CTGGGCCCCATGACCAAATCATGTCCAGTGCCTTCC...GGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATCTGAAGACATTCCTCTaGAGCTGGGACCTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNLKTFL*SWDLHR Trigger: TCTGTGCAGGTCCCAGCTGCAGAGGAATGTCTTCAG...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGTTGGACACATGGCATaGGGAGGAATACCATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AAQTLAGSELGLMGNAVAVGHMA*GGIPCY Trigger: GTAGCATGGTATTCCTCCGCATGCCATGTGTCCAAC...AGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGCACCGTGGGAAAAGTaGAGCTCTAGCACTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNAPWEK*SSSTIW Trigger: CCAGATAGTGCTAGAGCTCCACTTTTCCCACGGTGC...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACGGGAGCAGCAGGATCTaGAAGGTGAGTGCCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFRVGSGVCGWLAAFRVYGSSRI*KVSAGK Trigger: CTTGCCGGCACTCACCTTCCAGATCCTGCTGCTCCC...GTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | TGTACAATGTCTCCATGTCTTACAGGCCGGGGAGGGTaGTTTACCACCAGCTGGTGTCGCCCAGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTMSPCLTGRGG*FTTSWCRPGSL Trigger: CAAGGATCCTGGGCGACACCAGCTGGTGGTAAACAACCCTCCCCGGCCTGTAAGACATGGAGACATTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| CDS-3UTR GCA 90 bp | CCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACAGCTCCCTCTCCTTCTaGTCATGGCTTTTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PTLAAQTLAGSELGLMGNSSLSF*SWLLPY Trigger: GTATGGCAAAAGCCATGAGCAGAAGGAGAGGGAGCT...GTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATCATGTGGCCAAATGGTaGCCCACTGTCATCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNHVAKW*PTVIQK Trigger: TTTCTGGATGACAGTGGGCCACCATTTGGCCACATG...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTCCCAGGACTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGAGTGGATCTGAGCACTaGTCCTGGGATGTAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVSQDSLELAQESVDGWQSGSEH*SWDVAN Trigger: ATTGGCTACATCCCAGGACCAGTGCTCAGATCCACT...CTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAGTCCTGGGAGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | GAGAAATCAATTGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTGAGGTGAAATGTTGGTGTCCAGCGTaGGCCACTCCAGCGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKSIASNKEPVDRALEVKCWCPA*ATPAGW Trigger: CCACCCCGCTGGAGTGGCTCACGCTGGACACCAACA...TTTCACCTCAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAATTGATTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCAAAGGGCTGTGTGTCTaGGAGTTGAAGAACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVDGWQLSGFTEGGCACAKGLCV*ELKNFR Trigger: TCTGAAGTTCTTCAACTCCCAGACACACAGCCCTTT...GGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAGAGTTGGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACGAGTGTAGACCACTGTaGCAAGGCTGGCTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRVGSGVCGWLAAFRVYECRPL*QGWLKS Trigger: GGACTTCAGCCAGCCTTGCCACAGTGGTCTACACTC...GTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCCAACTCTAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TACCACCAGCTGGTGTCGCCCAGGATCCTTGACGATCCACCAGTTATTGATGTCACAATTCCTCCAAGCTaGCCTGGAAGGCACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YHQLVSPRILDDPPVIDVTIPPS*PGRHWT Trigger: TGTCCAGTGCCTTCCAGGCCAGCTTGGAGGAATTGT...GACATCAATAACTGGTGGATCGTCAAGGATCCTGGGCGACACCAGCTGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTAGCATGTTGGACACATaGCATGCGGAGGAATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCLGGSYTGSSNSGWVRVSMLDT*HAEEYH Trigger: ATGGTATTCCTCCGCATGCCATGTGTCCAACATGCT...AACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | TGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCACTACCAAGTTCAAATTaGTGTCAACAGTCACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CGWLAAFRVYRGWLCLCPLPSSN*CQQSPL Trigger: TAGTGGTGACTGTTGACATCAATTTGAACTTGGTAG...TGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR TCA 90 bp | TTCCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTATGTGTGTCTGGGAGTTaGAGAACTTCAGATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FLHWQLKLWLGQSWASWVCVSGS*RTSDRT Trigger: TGTCCTATCTGAAGTTCTTCAACTCCCAGACACACA...TACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCATTCTCATATATCATaGGATAGGTGTTCTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVDGWQLSGFTEGGCACAHSHIS*DRCSCA Trigger: CGCACAAGAACACCTATCCCATGATATATGAGAATG...GGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | GGGTTGTTTACCACCAGCTGGTGTCGCCCAGGATCCTaGACGATCCACCAGTTATTGATGTCTTTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFTTSWCRPGS*TIHQLLMSLKG Trigger: TCCCTTCAAAGACATCAATAACTGGTGGATCGTCAAGGATCCTGGGCGACACCAGCTGGTGGTAAACAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| 3UTR CAA 72 bp | CATGGAGATGTTATAGTCAATGTAGCAGGAGACTTCTaGAGAATGGGGGCTCAGTGGGGCTGCGACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HGDVIVNVAGDF*RMGAQWGCDIV Trigger: CACGATGTCGCAGCCCCACTGAGCCCCCATTCTCAAGAAGTCTCCTGCTACATTGACTATAACATCTCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132516.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAATCAATTGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTGAGGTGAAACTCGTGGTAGCCCGGTaGCAACTTCTCCCCAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKSIASNKEPVDRALEVKLVVAR*QLLPNY Trigger: GTAGTTGGGGAGAAGTTGTCACCGGGCTACCACGAG...TTTCACCTCAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAATTGATTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAATTGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTGAGGTGAAATGCACAGATGGTCGCTaGCGTGCTGCAGGACAATCG | + |
|
Preference number: 4 (lower is better) Translates to: EKSIASNKEPVDRALEVKCTDGR*RAAGQS Trigger: CGATTGTCCTGCAGCACGCCAGCGACCATCTGTGCA...TTTCACCTCAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAATTGATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR GCA 90 bp | GGTAACGCTGTGGCTGGGCACATTCTTCACTGTGTGAAGAGAAATCAATTGCTTGATCTGGAAGGTGAGTaGCGGCAAGTAGTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNAVAGHILHCVKRNQLLDLEGE*RQVVVE Trigger: CTCTACCACTACTTGCCGGCACTCACCTTCCAGATC...AAGCAATTGATTTCTCTTCACACAGTGAAGAATGTGCCCAGCCACAGCGTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | CTCCTGTTGGTGGGAGACAAACACATCTTTGAGGCTTaGTCCTGTGTGCTTGTCTTCTGTGTTCTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVGDKHIFEA*SCVLVFCVLVL Trigger: GAGAACAAGAACACAGAAGACAAGCACACAGGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| 3UTR CAA 72 bp | GCTGGGCACATTCTTCACTGTGTGAAGAGAAATCAATaGCTTCAAACAAGGAACCAGTGGACAGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGHILHCVKRNQ*LQTRNQWTGLL Trigger: CAAGAGCCCTGTCCACTGGTTCCTTGTTTGAAGCAATTGATTTCTCTTCACACAGTGAAGAATGTGCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS CCA 90 bp | ACGCTCTTCAGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCAAGCCCTCCCTCCAAGCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLFRVTWEPKATSRG*PWVMRASPPSKLAW Trigger: CCAGGCCAGCTTGGAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCTGAAGAGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGCTCCAGGGGCTGGCCTaGGGTGATGCGGGCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSFQGLQRVAVPVPNEVWLQGLA*GDAGKP Trigger: GGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAG...CCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS GCA 90 bp | GAGGAAGAGCACCCTCTCCATCAGGAAGAAGGGCAGGTAGTTGAGTaGCCAGCCGCCAGTACACAGGGCTCCAGCCAGCACCCAGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EEEHPLHQEEGQVVE*PAASTQGSSQHPAG Trigger: TCCCGCTGGGTGCTGGCTGGAGCCCTGTGTACTGGCGGCTGGGCACTCAACTACCTGCCCTTCTTCCTGATGGAGAGGGTGCTCTTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS CCA 90 bp | CAGCACCGTGGGAAAAGTGGAGCTCTAGCACTATCTGGTAGGCCATaGGCACTGACAGGGCCCCGGCAAGCGCTGGCAGCAGGCGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHRGKSGALALSGRP*ALTGPRQALAAGVR Trigger: CCTTACGCCTGCTGCCAGCGCTTGCCGGGGCCCTGTCAGTGCCCATGGCCTACCAGATAGTGCTAGAGCTCCACTTTTCCCACGGTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
||
| CDS TCA 90 bp | GGTAGAGGAAGAGCACCCTCTCCATCAGGAAGAAGGGCAGGTAGTTaGGTGCCCAGCCGCCAGTACACAGGGCTCCAGCCAGCACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRAPSPSGRRAGS*VPSRQYTGLQPAPS Trigger: GCTGGGTGCTGGCTGGAGCCCTGTGTACTGGCGGCTGGGCACTCAACTACCTGCCCTTCTTCCTGATGGAGAGGGTGCTCTTCCTCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS TCA 90 bp | CGCTGGCGTGCTGCAGGACAATCGGGAGCAGCAGGATCTGGAAGGTaGGTGCCGGCAAGTAGTGGTAGAGGAAGAGCACCCTCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RWRAAGQSGAAGSGR*VPASSGRGRAPSPS Trigger: TGATGGAGAGGGTGCTCTTCCTCTACCACTACTTGCCGGCACTCACCTTCCAGATCCTGCTGCTCCCGATTGTCCTGCAGCACGCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS GCA 90 bp | GGCGTGCTGCAGGACAATCGGGAGCAGCAGGATCTGGAAGGTGAGTaGCGGCAAGTAGTGGTAGAGGAAGAGCACCCTCTCCATCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVLQDNREQQDLEGE*RQVVVEEEHPLHQE Trigger: TTCCTGATGGAGAGGGTGCTCTTCCTCTACCACTACTTGCCGGCACTCACCTTCCAGATCCTGCTGCTCCCGATTGTCCTGCAGCACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | CCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGGCACTGGACATGATTaGGTCATGGGGCCCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTLAAQTLAGSELGLMGNGTGHD*VMGPRA Trigger: CGCTCTGGGCCCCATGACCAAATCATGTCCAGTGCC...GTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS CCA 90 bp | GAATACCATGCTACAACCAGGGCACTGAAGACATTCCTCTGCAGCTaGGACCTGCACAGATGGTCGCTGGCGTGCTGCAGGACAATCGGG | + |
|
Preference number: 5 (lower is better) Translates to: EYHATTRALKTFLCS*DLHRWSLACCRTIG Trigger: CCCGATTGTCCTGCAGCACGCCAGCGACCATCTGTGCAGGTCCCAGCTGCAGAGGAATGTCTTCAGTGCCCTGGTTGTAGCATGGTATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS TCA 90 bp | CAGAGCCACGATTCTGGCGAGCAAGTGACTGAGCACGCGCATATTTaGCAAGGTCTGGTCTCCGATCAGATTCCACGCGTGGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSHDSGEQVTEHAHI*QGLVSDQIPRVDSC Trigger: GCAGCTGTCCACGCGTGGAATCTGATCGGAGACCAGACCTTGTCAAATATGCGCGTGCTCAGTCACTTGCTCGCCAGAATCGTGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS TCA 90 bp | TGGACACATGGCATGCGGAGGAATACCATGCTACAACCAGGGCACTaGAGACATTCCTCTGCAGCTGGGACCTGCACAGATGGTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WTHGMRRNTMLQPGH*RHSSAAGTCTDGRW Trigger: CCAGCGACCATCTGTGCAGGTCCCAGCTGCAGAGGAATGTCTTCAGTGCCCTGGTTGTAGCATGGTATTCCTCCGCATGCCATGTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS TCA 90 bp | AGACTGGGACGACCAGCAGAGCCACGATTCTGGCGAGCAAGTGACTaGGCACGCGCATATTTGACAAGGTCTGGTCTCCGATCAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLGRPAEPRFWRASD*ARAYLTRSGLRSDS Trigger: GGAATCTGATCGGAGACCAGACCTTGTCAAATATGCGCGTGCTCAGTCACTTGCTCGCCAGAATCGTGGCTCTGCTGGTCGTCCCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS TCA 90 bp | AGGAAGACTGGGACGACCAGCAGAGCCACGATTCTGGCGAGCAAGTaGCTGAGCACGCGCATATTTGACAAGGTCTGGTCTCCGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKTGTTSRATILASK*LSTRIFDKVWSPIR Trigger: TCTGATCGGAGACCAGACCTTGTCAAATATGCGCGTGCTCAGTCACTTGCTCGCCAGAATCGTGGCTCTGCTGGTCGTCCCAGTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCTGAGGCTCCTGTTGGTGGGAGACAAACACATCTTTGAGGCTTTGTCCATAACAGGTCACCTGTaGCTGGTGGGAGCTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: CLLRLLLVGDKHIFEALSITGHL*LVGAAT Trigger: CGTGGCAGCTCCCACCAGCAACAGGTGACCTGTTAT...GGACAAAGCCTCAAAGATGTGTTTGTCTCCCACCAACAGGAGCCTCAGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | TGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATTGTCGCCCAGGATCCTaGACGATCCACCAGTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: WMAGSFQGLQRVAVPVPNCRPGS*TIHQLL Trigger: CAATAACTGGTGGATCGTCAAGGATCCTGGGCGACA...ATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAATGAGGTGTGGCACTGTGTAGCAGGAGACTTCTaGAGAATGGGGGCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FQGLQRVAVPVPNEVWHCVAGDF*RMGAQW Trigger: CCACTGAGCCCCCATTCTCAAGAAGTCTCCTGCTAC...ACAGTGCCACACCTCATTGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTTTCCAGGTATCCCGGTaGGACTCTCTGTTCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AAQTLAGSELGLMGNAVAFQVSR*DSLFTM Trigger: CATTGTGAACAGAGAGTCCAACCGGGATACCTGGAA...AGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS CCA 90 bp | GGACTCTCTGTTCACAATGTCCTGCAGAACCAGAACCTGTCAGCCTaGGGGGCAGTTTCCAGAGGTTCTGGGCAGGCATGGAGATGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GLSVHNVLQNQNLSA*GAVSRGSGQAWRCY Trigger: ATAACATCTCCATGCCTGCCCAGAACCTCTGGAAACTGCCCCCCAGGCTGACAGGTTCTGGTTCTGCAGGACATTGTGAACAGAGAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGTGCCTGTGCCCAGACCATATAGGCACATaGCTACTGTACTCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGWLAAFRVYRGWLCLCPDHIGT*LLYSAP Trigger: TGGAGCAGAGTACAGTAGCAATGTGCCTATATGGTC...TGGGCACAGGCACAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | CTCAAACTCTGGCTGGGTCAGAGTTGGGCCTCATGGGTAACGCTGTGGCTGGGCAAAATCCCCATGTATTaGATCCCAACTGCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKLWLGQSWASWVTLWLGKIPMY*IPTAQE Trigger: TTCCTGTGCAGTTGGGATCAAATACATGGGGATTTT...GCCCAGCCACAGCGTTACCCATGAGGCCCAACTCTGACCCAGCCAGAGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTTGGTGGTTCCTACACTGGCAGCTCAAACTCTGGCTGGGTCAGAGTTTTCTGCTCATGGCTTTaGCCATACCGGTGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLGGSYTGSSNSGWVRVFCSWL*PYRCSS Trigger: GGAAGAACACCGGTATGGCAAAAGCCATGAGCAGAA...AACTCTGACCCAGCCAGAGTTTGAGCTGCCAGTGTAGGAACCACCAAGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
||
| CDS CCA 90 bp | TTACCATCGAATCCCCCTAACCAACCTCCTAAGGCCAGTAGCATGTaGCCAAATGGTGGCCCACTGTCATCCAGAAAGAAGATGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSNPPNQPPKASSM*PNGGPLSSRKKMRF Trigger: GAAGCGCATCTTCTTTCTGGATGACAGTGGGCCACCATTTGGCCACATGCTACTGGCCTTAGGAGGTTGGTTAGGGGGATTCGATGGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS-3UTR CAA 90 bp | GGCTCAGGAGTCTGTGGATGGCTGGCAGCTTTCAGGGTTTACAGAGGGTGGCTGGCTACCAAGTTCAAATaGATGTCAACAGTCACCACT | + |
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Preference number: 5 (lower is better) Translates to: GSGVCGWLAAFRVYRGWLATKFK*MSTVTT Trigger: AGTGGTGACTGTTGACATCAATTTGAACTTGGTAGC...CAGCCACCCTCTGTAAACCCTGAAAGCTGCCAGCCATCCACAGACTCCTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS-3UTR CAA 90 bp | CTCATGGCTTTTGCCATACCGGTGTTCTTCCACATTCCACACCATGCTCTCGTGTTCCAGGTATCCCGGTaGGACTCTCTGTTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: LMAFAIPVFFHIPHHALVFQVSR*DSLFTM Trigger: CATTGTGAACAGAGAGTCCAACCGGGATACCTGGAA...CACGAGAGCATGGTGTGGAATGTGGAAGAACACCGGTATGGCAAAAGCCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| CDS GCA 90 bp | GTAGCATGTGGCCAAATGGTGGCCCACTGTCATCCAGAAAGAAGATaGGCTTCATGTAGAAGGAAATGTACTGCCCATAATATACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VACGQMVAHCHPERR*ASCRRKCTAHNILH Trigger: ATGAAGTATATTATGGGCAGTACATTTCCTTCTACATGAAGCGCATCTTCTTTCTGGATGACAGTGGGCCACCATTTGGCCACATGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS TCA 72 bp | GGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTGGGTaGTGCGGGCAAGCCCTCCCTCCAAGCTGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GNQRPPPGAGLG*CGQALPPSWPG Trigger: TCCAGGCCAGCTTGGAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS CCA 72 bp | ACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTTaGGTGATGCGGGCAAGCCCTCCCTCCAAGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TWEPKATSRGWP*VMRASPPSKLA Trigger: GGCCAGCTTGGAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS CAA 72 bp | GACCTGGGAACCAAAGGCCACCTCCAGGGGCTGGCCTaGGGTGATGCGGGCAAGCCCTCCCTCCAAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DLGTKGHLQGLA*GDAGKPSLQAG Trigger: GCCAGCTTGGAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS CCA 72 bp | AGAGTGACCTGGGAACCAAAGGCCACCTCCAGGGGCTaGCCTTGGGTGATGCGGGCAAGCCCTCCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RVTWEPKATSRG*PWVMRASPPSK Trigger: CTTGGAGGGAGGGCTTGCCCGCATCACCCAAGGCCAGCCCCTGGAGGTGGCCTTTGGTTCCCAGGTCACTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS GCA 72 bp | CACCCTCTCCATCAGGAAGAAGGGCAGGTAGTTGAGTaGCCAGCCGCCAGTACACAGGGCTCCAGCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HPLHQEEGQVVE*PAASTQGSSQH Trigger: GTGCTGGCTGGAGCCCTGTGTACTGGCGGCTGGGCACTCAACTACCTGCCCTTCTTCCTGATGGAGAGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS CCA 72 bp | TGGGTGATGCGGGCAAGCCCTCCCTCCAAGCTGGCCTaGAAGGCACTGGACATGATTTGGTCATGGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WVMRASPPSKLA*KALDMIWSWGP Trigger: TGGGCCCCATGACCAAATCATGTCCAGTGCCTTCCAGGCCAGCTTGGAGGGAGGGCTTGCCCGCATCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS TCA 72 bp | AGAGCACCCTCTCCATCAGGAAGAAGGGCAGGTAGTTaGGTGCCCAGCCGCCAGTACACAGGGCTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RAPSPSGRRAGS*VPSRQYTGLQP Trigger: TGGCTGGAGCCCTGTGTACTGGCGGCTGGGCACTCAACTACCTGCCCTTCTTCCTGATGGAGAGGGTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS CCA 72 bp | CATTCCTCTGCAGCTGGGACCTGCACAGATGGTCGCTaGCGTGCTGCAGGACAATCGGGAGCAGCAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: HSSAAGTCTDGR*RAAGQSGAAGS Trigger: AGATCCTGCTGCTCCCGATTGTCCTGCAGCACGCCAGCGACCATCTGTGCAGGTCCCAGCTGCAGAGGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS GCA 72 bp | TACCATGCTACAACCAGGGCACTGAAGACATTCCTCTaGAGCTGGGACCTGCACAGATGGTCGCTGGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: YHATTRALKTFL*SWDLHRWSLAC Trigger: GCACGCCAGCGACCATCTGTGCAGGTCCCAGCTGCAGAGGAATGTCTTCAGTGCCCTGGTTGTAGCATGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS TCA 72 bp | CGACCAGCAGAGCCACGATTCTGGCGAGCAAGTGACTaGGCACGCGCATATTTGACAAGGTCTGGTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: RPAEPRFWRASD*ARAYLTRSGLR Trigger: TCGGAGACCAGACCTTGTCAAATATGCGCGTGCTCAGTCACTTGCTCGCCAGAATCGTGGCTCTGCTGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS TCA 72 bp | GGGACGACCAGCAGAGCCACGATTCTGGCGAGCAAGTaGCTGAGCACGCGCATATTTGACAAGGTCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTTSRATILASK*LSTRIFDKVWS Trigger: AGACCAGACCTTGTCAAATATGCGCGTGCTCAGTCACTTGCTCGCCAGAATCGTGGCTCTGCTGGTCGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS GCA 72 bp | GGTCTGGTCTCCGATCAGATTCCACGCGTGGACAGCTaGAATGCCGAGCACAAGCAGGTAGGTGAAAATCCC | + |
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Preference number: 6 (lower is better) Translates to: GLVSDQIPRVDS*NAEHKQVGENP Trigger: GGGATTTTCACCTACCTGCTTGTGCTCGGCATTGCAGCTGTCCACGCGTGGAATCTGATCGGAGACCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 |
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| CDS CCA 72 bp | AATCCCCCTAACCAACCTCCTAAGGCCAGTAGCATGTaGCCAAATGGTGGCCCACTGTCATCCAGAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: NPPNQPPKASSM*PNGGPLSSRKK Trigger: CTTCTTTCTGGATGACAGTGGGCCACCATTTGGCCACATGCTACTGGCCTTAGGAGGTTGGTTAGGGGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS CAA 72 bp | AGCGCTGGCAGCAGGCGTAAGGACCATATAGGCACATaGCTACTGTACTCTGCTCCAATTCGGTTCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SAGSRRKDHIGT*LLYSAPIRFHR Trigger: TCTGTGGAACCGAATTGGAGCAGAGTACAGTAGCAATGTGCCTATATGGTCCTTACGCCTGCTGCCAGCGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS CAA 72 bp | CGCACTTCCGACAAGATAGTCTTCCAGGTATCCCGGTaGGACTCTCTGTTCACAATGTCCTGCAGAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: RTSDKIVFQVSR*DSLFTMSCRTR Trigger: TCTGGTTCTGCAGGACATTGTGAACAGAGAGTCCAACCGGGATACCTGGAAGACTATCTTGTCGGAAGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| CDS CAA 90 bp | TGTACAAAGCGCACTTCCGACAAGATAGTCTTCCAGGTATCCCGGTaGGACTCTCTGTTCACAATGTCCTGCAGAACCAGAACCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: CTKRTSDKIVFQVSR*DSLFTMSCRTRTCQ Trigger: CTGACAGGTTCTGGTTCTGCAGGACATTGTGAACAGAGAGTCCAACCGGGATACCTGGAAGACTATCTTGTCGGAAGTGCGCTTTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192998.2 |
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| CDS CAA 90 bp | ATGTCAACAGTCACCACTAGAGGCCGTTTCAAAAATCTTAACATTTaGCAGAAAAGCCAGCTCGGGAGGACTCCGAGCGTTTCTTCGAGT | + |
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Preference number: 6 (lower is better) Translates to: MSTVTTRGRFKNLNI*QKSQLGRTPSVSSS Trigger: ACTCGAAGAAACGCTCGGAGTCCTCCCGAGCTGGCTTTTCTGCAAAATGTTAAGATTTTTGAAACGGCCTCTAGTGGTGACTGTTGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036473.16 |
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| CDS TCA 72 bp | GTAGTCCCAGGCCAGTCAGAGCTACCAAGTTCAAATTaGTGTCAACAGTCACCACTAGAGGCCGTTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VVPGQSELPSSN*CQQSPLEAVSK Trigger: TTTTGAAACGGCCTCTAGTGGTGACTGTTGACATCAATTTGAACTTGGTAGCTCTGACTGGCCTGGGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS CCA 72 bp | ATTTTGCAGAAAAGCCAGCTCGGGAGGACTCCCTGTTaGAGAATTACAGTTGTGTTCAAGCACAGGGTATAC | + |
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Preference number: 6 (lower is better) Translates to: ILQKSQLGRTPC*RITVVFKHRVY Trigger: GTATACCCTGTGCTTGAACACAACTGTAATTCTCCAACAGGGAGTCCTCCCGAGCTGGCTTTTCTGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146485.8 |
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| CDS CAA 72 bp | AGTAGTCCCAGGCCAGTCAGAGCTACCAAGTTCAAATaGATGTCAACAGTCACCACTAGAGGCCGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSPRPVRATKFK*MSTVTTRGRFK Trigger: TTTGAAACGGCCTCTAGTGGTGACTGTTGACATCAATTTGAACTTGGTAGCTCTGACTGGCCTGGGACTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS CAA 72 bp | CATTTTGCAGAAAAGCCAGCTCGGGAGGACTCCCTGTaGGAGAATTACAGTTGTGTTCAAGCACAGGGTATA | + |
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Preference number: 6 (lower is better) Translates to: HFAEKPAREDSL*ENYSCVQAQGI Trigger: TATACCCTGTGCTTGAACACAACTGTAATTCTCCAACAGGGAGTCCTCCCGAGCTGGCTTTTCTGCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146485.8 |
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| CDS CAA 90 bp | AGTCGGGTAAGTAGTCCCAGGCCAGTCAGAGCTACCAAGTTCAAATaGATGTCAACAGTCACCACTAGAGGCCGTTTCAAAAATCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SRVSSPRPVRATKFK*MSTVTTRGRFKNLN Trigger: GTTAAGATTTTTGAAACGGCCTCTAGTGGTGACTGTTGACATCAATTTGAACTTGGTAGCTCTGACTGGCCTGGGACTACTTACCCGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036473.16 ENSMUST00000123740.3 ENSMUST00000146485.8 |
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| CDS CAA 90 bp | ATGTCAACAGTCACCACTAGAGGCCGTTTCAAAAATCTTAACATTTaGCAGAAAAGCCAGCTCGGGAGGACTCCCTGTTGGAGAATTACA | + |
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Preference number: 6 (lower is better) Translates to: MSTVTTRGRFKNLNI*QKSQLGRTPCWRIT Trigger: TGTAATTCTCCAACAGGGAGTCCTCCCGAGCTGGCTTTTCTGCAAAATGTTAAGATTTTTGAAACGGCCTCTAGTGGTGACTGTTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146485.8 |
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