Pregenerated sensors for POMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029649Ensembl transcript IDs: ENSMUST00000031654.10, ENSMUST00000201120.2, ENSMUST00000201376.4
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCAGTCATGTGGCTCAGTACAAGTTACCCACCTCAAAGCCCGTaGACAGACAGGGTGGCCACTGCCACTCGAGCTGCAGATCACTTT | + |
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Preference number: 1 (lower is better) Translates to: DPVMWLSTSYPPQSP*TDRVATATRAADHF Trigger: AAAGTGATCTGCAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACGGGCTTTGAGGTGGGTAACTTGTACTGAGCCACATGACTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | AGCCCACCTTGCTCCAGCTCAGGGAGACCAAGTTCCAACAGGACCTaGCGAGTAAAGAGTCACTCTCCTCAGCCAAGGACACTGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SPPCSSSGRPSSNRT*RVKSHSPQPRTLLL Trigger: CAGCAACAGTGTCCTTGGCTGAGGAGAGTGACTCTTTACTCGCCAGGTCCTGTTGGAACTTGGTCTCCCTGAGCTGGAGCAAGGTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | CCCGCAGTTTCAGAAATCCATTGGAGGTCCCAGAACAGGTCTCCATaGACCAAGGGGCTGATAACAAGGGCTGGCTGCCTTGTGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PAVSEIHWRSQNRSP*TKGLITRAGCLVVS Trigger: ACTGACCACAAGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGACCTCCAATGGATTTCTGAAACTGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR CCA 90 bp | GCAGGACACAGTGAGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTaGGTGGCATGGAGATCTGGTAAGAACCAGATCTTTAGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGHSERFTVTLGEGG*VAWRSGKNQIFRVR Trigger: CCTCACCCTAAAGATCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACTGTGTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | GGGCAAAGTGAGAAGCAGGACACAGTGAGAGGTTTACAGTCACTCTaGGGGAAGGGGGCTGGGTGGCATGGAGATCTGGTAAGAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: GQSEKQDTVRGLQSL*GKGAGWHGDLVRTR Trigger: TCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACTGTGTCCTGCTTCTCACTTTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR GCA 90 bp | TCTGCACACAGCTATCCCTTAGCAACAGGCACACCCAGCTGTATATaGACAGCTGCCTGCAGAGGGCAGAGAATCACGAAGGCAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SAHSYPLATGTPSCI*TAACRGQRITKAEN Trigger: GTTTTCTGCCTTCGTGATTCTCTGCCCTCTGCAGGCAGCTGTGCATATACAGCTGGGTGTGCCTGTTGCTAAGGGATAGCTGTGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | TCAACAGCACAGAGTACAGGCAGGAAACAGGAGAGAGAACAAAGCTaGCCCCCAACACCACCAGCATCTCAGGTGACAGACAGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: STAQSTGRKQEREQS*PPTPPASQVTDRRN Trigger: GTTCCTTCTGTCTGTCACCTGAGATGCTGGTGGTGTTGGGGGCCAGCTTTGTTCTCTCTCCTGTTTCCTGCCTGTACTCTGTGCTGTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | AGTGAGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTGGGTGGCATaGAGATCTGGTAAGAACCAGATCTTTAGGGTGAGGGTGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: SERFTVTLGEGGWVA*RSGKNQIFRVRVTR Trigger: TCTTGTCACCCTCACCCTAAAGATCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | GGCTCAGTACAAGTTACCCACCTCAAAGCCCGTGCACAGACAGGGTaGCCACTGCCACTCGAGCTGCAGATCACTTTATACTTTACCAAG | + |
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Preference number: 1 (lower is better) Translates to: GSVQVTHLKARAQTG*PLPLELQITLYFTK Trigger: CTTGGTAAAGTATAAAGTGATCTGCAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACGGGCTTTGAGGTGGGTAACTTGTACTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | CATGAAGTCCCCTCAGGGAACAGTGGCTCACAAACGCTGTGGACCTaGAAGCACACATCACCATGGATCTCCAGATGTACAGAGCAGACT | + |
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Preference number: 1 (lower is better) Translates to: HEVPSGNSGSQTLWT*KHTSPWISRCTEQT Trigger: AGTCTGCTCTGTACATCTGGAGATCCATGGTGATGTGTGCTTCCAGGTCCACAGCGTTTGTGAGCCACTGTTCCCTGAGGGGACTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | CGCATTCATGAAGTCCCCTCAGGGAACAGTGGCTCACAAACGCTGTaGACCTGGAAGCACACATCACCATGGATCTCCAGATGTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: RIHEVPSGNSGSQTL*TWKHTSPWISRCTE Trigger: CTCTGTACATCTGGAGATCCATGGTGATGTGTGCTTCCAGGTCCACAGCGTTTGTGAGCCACTGTTCCCTGAGGGGACTTCATGAATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR TCA 90 bp | AGGAGAGAGAACAAAGCTGGCCCCCAACACCACCAGCATCTCAGGTaGCAGACAGAAGGAACCACAGAGTTGCAAATGGGTTTCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RRENKAGPQHHQHLR*QTEGTTELQMGFRE Trigger: CTCTCTGAAACCCATTTGCAACTCTGTGGTTCCTTCTGTCTGTCACCTGAGATGCTGGTGGTGTTGGGGGCCAGCTTTGTTCTCTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR GCA 90 bp | CAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCTaGCTTGTGGTCAGTGTTCTAAAGAGACGGCTGGATATTAGAACC | + |
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Preference number: 1 (lower is better) Translates to: QNRSPWTKGLITRAG*LVVSVLKRRLDIRT Trigger: GGTTCTAATATCCAGCCGTCTCTTTAGAACACTGACCACAAGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR TCA 90 bp | GGGCACAGGCTGTGCAGACAGAAACATCTGGAAACATTCATCGTCTaGCGATCACAGACCCAGTCATGTGGCTCAGTACAAGTTACCCAC | + |
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Preference number: 1 (lower is better) Translates to: GHRLCRQKHLETFIV*RSQTQSCGSVQVTH Trigger: GTGGGTAACTTGTACTGAGCCACATGACTGGGTCTGTGATCGTCAGACGATGAATGTTTCCAGATGTTTCTGTCTGCACAGCCTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR TCA 90 bp | TGCAGCCAATGTCATGCAATAGACAGGTGTGGACTGGAAACCAAGTaGAACACGGGAAAGGGGCACAGGCTGTGCAGACAGAAACATCTG | + |
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Preference number: 1 (lower is better) Translates to: CSQCHAIDRCGLETK*NTGKGHRLCRQKHL Trigger: CAGATGTTTCTGTCTGCACAGCCTGTGCCCCTTTCCCGTGTTTCACTTGGTTTCCAGTCCACACCTGTCTATTGCATGACATTGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR GCA 90 bp | CCCAGAGATGCCAGTGTGTCAGGGGGTAGGGAGACATGGTGGTTGTaGGGTCATCCTGGAACTATTCATGGGTGTATAACAGGAATATTC | + |
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Preference number: 1 (lower is better) Translates to: PRDASVSGGRETWWL*GHPGTIHGCITGIF Trigger: GAATATTCCTGTTATACACCCATGAATAGTTCCAGGATGACCGCACAACCACCATGTCTCCCTACCCCCTGACACACTGGCATCTCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR GCA 90 bp | TGGGAAATAAGAACTCACGTCTTAGGGACAGACCGGGTTTTAAAGTaGACTGATGATGGCGCTGGCGCTGGCACCATAACTTTACCCAGC | + |
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Preference number: 1 (lower is better) Translates to: WEIRTHVLGTDRVLK*TDDGAGAGTITLPS Trigger: GCTGGGTAAAGTTATGGTGCCAGCGCCAGCGCCATCATCAGTGCACTTTAAAACCCGGTCTGTCCCTAAGACGTGAGTTCTTATTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | TTAGAACCCAGAGATGCCAGTGTGTCAGGGGGTAGGGAGACATGGTaGTTGTGCGGTCATCCTGGAACTATTCATGGGTGTATAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: LEPRDASVSGGRETW*LCGHPGTIHGCITG Trigger: TCCTGTTATACACCCATGAATAGTTCCAGGATGACCGCACAACCACCATGTCTCCCTACCCCCTGACACACTGGCATCTCTGGGTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR CCA 90 bp | AGTGAAACACGGGAAAGGGGCACAGGCTGTGCAGACAGAAACATCTaGAAACATTCATCGTCTGACGATCACAGACCCAGTCATGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SETRERGTGCADRNI*KHSSSDDHRPSHVA Trigger: AGCCACATGACTGGGTCTGTGATCGTCAGACGATGAATGTTTCCAGATGTTTCTGTCTGCACAGCCTGTGCCCCTTTCCCGTGTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CCA 90 bp | TGCCACTCGAGCTGCAGATCACTTTATACTTTACCAAGAGTTAGGTaGTCAGCAGCAAGTGACACCAAGACGGAAACTAATCCCGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: CHSSCRSLYTLPRVR*SAASDTKTETNPVV Trigger: GACCACGGGATTAGTTTCCGTCTTGGTGTCACTTGCTGCTGACCACCTAACTCTTGGTAAAGTATAAAGTGATCTGCAGCTCGAGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR TCA 90 bp | AGTTTTATTAGCAATATGCAGCTCAAACCAAGGCAAAGACAGAGATaGGGGAGGCTGCGCTCTGTGTCAAACGCCATTTCATGGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: SFISNMQLKPRQRQR*GRLRSVSNAISWEP Trigger: AGGTTCCCATGAAATGGCGTTTGACACAGAGCGCAGCCTCCCTCATCTCTGTCTTTGCCTTGGTTTGAGCTGCATATTGCTAATAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR TCA 90 bp | CGGGCTGATGTCACCTTGTATAGTAAGTATAGTGTTCCACAGTGCTaGGTGCCACTCACCATTAAGAATATCCTCAAAACCAATGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RADVTLYSKYSVPQC*VPLTIKNILKTNGL Trigger: GAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTGGCACTCAGCACTGTGGAACACTATACTTACTATACAAGGTGACATCAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR TCA 90 bp | CCAGCTTTACTTACAATAATTACCATTAAATCTATGTTAGGGCTGTaGGTGACTACGAGTGACTTCTGTGATGTCCCTGGGACAGACGCA | + |
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Preference number: 1 (lower is better) Translates to: PALLTIITIKSMLGL*VTTSDFCDVPGTDA Trigger: TGCGTCTGTCCCAGGGACATCACAGAAGTCACTCGTAGTCACTCACAGCCCTAACATAGATTTAATGGTAATTATTGTAAGTAAAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR GCA 90 bp | CTGATGTCACCTTGTATAGTAAGTATAGTGTTCCACAGTGCTGAGTaGCACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCG | + |
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Preference number: 1 (lower is better) Translates to: LMSPCIVSIVFHSAE*HSPLRISSKPMVSS Trigger: CGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTGGCACTCAGCACTGTGGAACACTATACTTACTATACAAGGTGACATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGAGAGGTTTGAGCTCGGGAGAAACGGGAGACGGTGAACCTGGGGAGAAGCGTGCACAGACAGGGTaGCCACTGCCACTCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PVRGLSSGETGDGEPGEKRAQTG*PLPLEL Trigger: CAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACG...CTTCTCCCCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAAGCCCGTGCACAGACAGGGTGGCCACTGCCACTCGAGCTGCAGATCACACACCCAGCTGTATATaGACAGCTGCCTGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PQSPCTDRVATATRAADHTPSCI*TAACRG Trigger: CCCTCTGCAGGCAGCTGTGCATATACAGCTGGGTGT...GTGATCTGCAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACGGGCTTTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTCCCAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCGGGGGTAGGGAGACATaGTGGTTGTGCGGTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: WRSQNRSPWTKGLITRAGGGRET*WLCGHP Trigger: AGGATGACCGCACAACCACCATGTCTCCCTACCCCC...GCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGACCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGGAGCCAGAAGACACTaGCTCAGAGAAGGAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LASNSEIRLPLPLPPECWGARRH*LREGSK Trigger: TTTGCTTCCTTCTCTGAGCCAGTGTCTTCTGGCTCC...CCAGCACTCGGGAGGCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGAGAGGTTTGAGCTCGGGAGAAACGGGAGACGGTGAACCTGGGGAGAAGCCTGCGCTTGGGAGCTaGTTCTGTTTGGGGAAACGA | + |
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Preference number: 2 (lower is better) Translates to: PVRGLSSGETGDGEPGEKPALGS*FCLGKR Trigger: TCGTTTCCCCAAACAGAAGCAGCTCCCAAGCGCAGG...CTTCTCCCCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR CAA 90 bp | GCCAGTGCTTACTACCACCACCTAACCCACCAGGCCCACCTGCGCTaGGGAGCTGCTTCTGTTTGGGGAAACGATAGCACGATGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ASAYYHHLTHQAHLR*GAASVWGNDSTMKS Trigger: GCTTTTCATCGTGCTATCGTTTCCCCAAACAGAAGCAGCTCCCAAGCGCAGGTGGGCCTGGTGGGTTAGGTGGTGGTAGTAAGCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGAGAGGTTTGAGCTCGGGAGAAACGGGAGACGGTGAACCTGGGGAGAAGCAGACACTGCGTCTATaGCATGAAGCCGTTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PVRGLSSGETGDGEPGEKQTLRL*HEAVLH Trigger: GTGGAGAACGGCTTCATGTCATAGACGCAGTGTCTG...CTTCTCCCCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGAGAGGTTTGAGCTCGGGAGAAACGGGAGACGGTGAACCTGGGGAGAAGCACACTGGCAAGACCTaGGGGATGACTCACAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: PVRGLSSGETGDGEPGEKHTGKT*GMTHSY Trigger: GTAACTGTGAGTCATCCCTCAGGTCTTGCCAGTGTG...CTTCTCCCCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCGAGTAAAGAGTCACTCTCCTCAGCCAAGGACACTGTTGCTGCTCTGCAAGGGAAGGGGGCTGGGTaGCATGGAGATCTGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LASKESLSSAKDTVAALQGKGAG*HGDLVR Trigger: TCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCC...TTGCAGAGCAGCAACAGTGTCCTTGGCTGAGGAGAGTGACTCTTTACTCGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCAGCAATTCCAAGTTTCCCGCATTCATGAAGTCCCCTCAGGGAACAGTGCTGGGGGAAGGGGGCTaGGTGGCATGGAGATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KLSNSKFPAFMKSPQGTVLGEGG*VAWRSG Trigger: ACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAG...CACTGTTCCCTGAGGGGACTTCATGAATGCGGGAAACTTGGAATTGCTGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGCTGCAGAAGGCTCAGGGAGGCCAACCATGCACTTCGCTCTTTATTTGGAGAGCATCCGAGGTaGAGAGCATCAGAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RESCRRLREANHALRSLFGEHPR*RASEAG Trigger: CCCTGCCTCTGATGCTCTCCACCTCGGATGCTCTCC...AAATAAAGAGCGAAGTGCATGGTTGGCCTCCCTGAGCCTTCTGCAGCTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGACACAGTGAGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTGGGTGGCAAAGGAACCACAGAGTTaGAAATGGGTTTCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: AGHSERFTVTLGEGGWVAKEPQS*KWVSER Trigger: CCTCTCTGAAACCCATTTGCAACTCTGTGGTTCCTT...TGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACTGTGTCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCTGCCTTCAAATGCTTCCACATaGCCCAGTGATCCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VPEQVSMDQGADNKGWLPSNAST*PSDPLC Trigger: ACAGAGAGGATCACTGGGCCATGTGGAAGCATTTGA...AGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR-3UTR GCA 90 bp | TCACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATAAAATCCGCCTGCCTCTaGCTCTGCCTCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SLRRPLKLQCHCSQCHAIKSACL*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAGAGGCAGGCGGATTT...TATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATAGGCGAGGCAGATCCCTaGGAGTTCAAGGCCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: SLRRPLKLQCHCSQCHAIGEADP*EFKASM Trigger: CATGCTGGCCTTGAACTCCCAGGGATCTGCCTCGCC...TATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGTCCCAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCGGTGAGATAAAACTTTaGACCACAATCATTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: WRSQNRSPWTKGLITRAGGEIKL*TTIIQA Trigger: AGCTTGAATGATTGTGGTTCAAAGTTTTATCTCACC...GCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGACCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGCTGCAGAAGGCTCAGGGAGGCCAACCATGCACTTCGCTCTTTATTTACTCACAGTTACCAATaGGCTCTGGCTGTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RESCRRLREANHALRSLFTHSYQ*ALAVLP Trigger: TGGAAGAACAGCCAGAGCTCATTGGTAACTGTGAGT...AAATAAAGAGCGAAGTGCATGGTTGGCCTCCCTGAGCCTTCTGCAGCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTACATACCCCCTGTGAAATCCAAGATGCCTGTGGGCCTTCCAACCAGAAAAGAAAATGTCTGCCCTaGTCAGGAGCAAACCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: ILHTPCEIQDACGPSNQKRKCLP*SGANPA Trigger: TGCGGGGTTTGCTCCTGAGCAGGGCAGACATTTTCT...TTTCTGGTTGGAAGGCCCACAGGCATCTTGGATTTCACAGGGGGTATGTAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATACCCGTGGTCAGTGTCTaGAGAGGCAGTTACGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLRRPLKLQCHCSQCHAIPVVSV*RGSYGR Trigger: TCTCCCGTAACTGCCTCTGCAGACACTGACCACGGG...TATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAGGGCAAAGTGAGAAGCAGGACACAGTGAGAGGTTTACAGTCACTCTGGGGAAAAGGGAGAAGCTaGGGTGAGAAAATGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRGQSEKQDTVRGLQSLWGKGRS*GEKMSA Trigger: GGCAGACATTTTCTCACCCCAGCTTCTCCCTTTTCC...CCAGAGTGACTGTAAACCTCTCACTGTGTCCTGCTTCTCACTTTGCCCTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAACAGGGAGCTGTTCCCTaGAGCAGTGTGACGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKQGAVP*SSVTQW Trigger: CCATTGCGTCACACTGCTTCAGGGAACAGCTCCCTG...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAAGTACCAGCAGACAAGTaGGGAAAGATGTGGGGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKVPADK*GKMWGE Trigger: CTCGCCCCACATCTTTCCTCACTTGTCTGCTGGTAC...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAAAGGGAGAAGCTGGGGTaGGAAAATGTCTGCCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKREKLG*ENVCPA Trigger: AGCAGGGCAGACATTTTCTCACCCCAGCTTCTCCCT...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATGAATGGATGACTGTTAAACTGACTGAAATGCCAGATCTCAGGACAACGGGACTGGAAACCAAGTaGAACACGGGAAAGGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QNEWMTVKLTEMPDLRTTGLETK*NTGKGH Trigger: GTGCCCCTTTCCCGTGTTTCACTTGGTTTCCAGTCC...CGTTGTCCTGAGATCTGGCATTTCAGTCAGTTTAACAGTCATCCATTCATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAGTTGCAAATGGGTTTCAGAGAGGAAGGGGACACCAATTTAAGGTCTATATATGCACAGCTGCCTaGAGAGGGCAGAGAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: HRVANGFQRGRGHQFKVYICTAA*RGQRIT Trigger: CGTGATTCTCTGCCCTCTGCAGGCAGCTGTGCATAT...ATAGACCTTAAATTGGTGTCCCCTTCCTCTCTGAAACCCATTTGCAACTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAAAGAGATGAGGGAGGCTaGGCTCTGTGTCAAACGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKRDEGG*ALCQTP Trigger: TGGCGTTTGACACAGAGCGCAGCCTCCCTCATCTCT...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTAGGCTCTCAACTGACCCACAACCCAAAACCAAGCCTCAAATGCTTCCACCTCTCTGTACTTTACTaGTGTGAACATCAGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PLGSQLTHNPKPSLKCFHLSVLY*CEHQTV Trigger: TACAGTCTGATGTTCACAGCAGTAAAGTACAGAGAG...GTGGAAGCATTTGAGGCTTGGTTTTGGGTTGTGGGTCAGTTGAGAGCCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR-3UTR GCA 90 bp | TTGATCCACCAGGCAGTTGGGCTTTATCTAGAGGGCAAAGTGAGAAGCAGGACAGAAGGCAGAAAACTATaGTATTCTCAGACACTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: LIHQAVGLYLEGKVRSRTEGRKL*YSQTLR Trigger: ACGCAGTGTCTGAGAATAGCATAGTTTTCTGCCTTC...TGTCCTGCTTCTCACTTTGCCCTCTAGATAAAGCCCAACTGCCTGGTGGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAGTTGCAAATGGGTTTCAGAGAGGAAGGGGACACCAATTTAAGGTCTATCTGTATATGCACAGCTaGCTGCAGAGGGCAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HRVANGFQRGRGHQFKVYLYMHS*LQRAEN Trigger: ATTCTCTGCCCTCTGCAGGCAGCTGTGCATATACAG...ATAGACCTTAAATTGGTGTCCCCTTCCTCTCTGAAACCCATTTGCAACTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATAGAGATCCACCAGGCAGTTaGGCTTTATCTAGAGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TQEAFKVTVSLQPMSCNRDPPGS*ALSRGQ Trigger: TTGCCCTCTAGATAAAGCCCAACTGCCTGGTGGATC...TCTATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAAACTCATAGCACTGGCTaGAAGACTCAAGGTCTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKTHSTG*KTQGLA Trigger: AGCGAGACCTTGAGTCTTGCAGCCAGTGCTATGAGT...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAACCACAGAGTTGCAAATaGGTTTCAGAGAGGAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKPQSCK*VSERKG Trigger: CCCCTTCCTCTCTGAAACCCATTTGCAACTCTGTGG...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATGAATGGATGACTGTTAAACTGACTGAAATGCCAGATCTCAGGACAACGAATCCAAGATGCCTGTaGGCCTTCCAACCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QNEWMTVKLTEMPDLRTTNPRCL*AFQPEK Trigger: TTTTTCTGGTTGGAAGGCCCACAGGCATCTTGGATT...CGTTGTCCTGAGATCTGGCATTTCAGTCAGTTTAACAGTCATCCATTCATTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATAGATCAGGTCTTCTCATTTaGAGCCATTTTAGAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TQEAFKVTVSLQPMSCNRSGLLI*SHFRAV Trigger: TACAGCTCTAAAATGGCTTCAAATGAGAAGACCTGA...TCTATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACCATTAAGAATATCCTCAAAACCAATGGTCTCATCGTTGCCCCTCAAAAAGTTACAGTGTCACTaGAGCCAATGTCATGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: HSPLRISSKPMVSSLPLKKLQCH*SQCHAI Trigger: TATTGCATGACATTGGCTGCAGTGACACTGTAACTT...TTTGAGGGGCAACGATGAGACCATTGGTTTTGAGGATATTCTTAATGGTGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAATGCCAGATCTCAGGACAACGAGCCAGCTTTACTTACAATAATTACCATCATTCACCCACAAGGTaGAGGATAATGAGTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKCQISGQRASFTYNNYHHSPTR*RIMSYS Trigger: AGAATAACTCATTATCCTTCACCTTGTGGGTGAATG...ATGGTAATTATTGTAAGTAAAGCTGGCTCGTTGTCCTGAGATCTGGCATTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | GAGAAGAGAGCAAAGGGCCCGGGAGAGCATCCGAGGTaGAGAGCATCAGAGGCAGGGCTCGCAAAACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EKRAKGPGEHPR*RASEAGLAKPK Trigger: CTTGGGTTTTGCGAGCCCTGCCTCTGATGCTCTCCACCTCGGATGCTCTCCCGGGCCCTTTGCTCTCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | TGGCTCCCAGCAGCTCAACCTGTACCAGCAGACAAGTaGGGAAAGATGTGGGGCGAGGCAGATCCCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WLPAAQPVPADK*GKMWGEADPWE Trigger: CTCCCAGGGATCTGCCTCGCCCCACATCTTTCCTCACTTGTCTGCTGGTACAGGTTGAGCTGCTGGGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CGCTGGCACCATAACTTTACCCAGCACATCTGCCAGTaGTTACTACCACCACCTAACCCACCAGGCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RWHHNFTQHICQ*LLPPPNPPGPP Trigger: AGGTGGGCCTGGTGGGTTAGGTGGTGGTAGTAAGCACTGGCAGATGTGCTGGGTAAAGTTATGGTGCCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | GAGAAGCAGGACACAGTGAGAGGTTTACAGTCACTCTaGGGGAAGGGGGCTGGGTGGCATGGAGATCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EKQDTVRGLQSL*GKGAGWHGDLV Trigger: TACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACTGTGTCCTGCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | ATTCCCAGCACCTACACAGAGGCTAAGGACAGCCTATaGGTCAGGTCCTACCCCCAACCCCTCACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: IPSTYTEAKDSL*VRSYPQPLTHT Trigger: TGTGTGTGTGAGGGGTTGGGGGTAGGACCTGACTCATAGGCTGTCCTTAGCCTCTGTGTAGGTGCTGGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | CAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTaGCTGCCTTGTGGTCAGTGTTCTAAAGAGACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVSMDQGADNKG*LPCGQCSKETA Trigger: AGCCGTCTCTTTAGAACACTGACCACAAGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR CCA 72 bp | CAGAGTACAGGCAGGAAACAGGAGAGAGAACAAAGCTaGCCCCCAACACCACCAGCATCTCAGGTGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSTGRKQEREQS*PPTPPASQVTD Trigger: GTCTGTCACCTGAGATGCTGGTGGTGTTGGGGGCCAGCTTTGTTCTCTCTCCTGTTTCCTGCCTGTACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | CAAGTTACCCACCTCAAAGCCCGTGCACAGACAGGGTaGCCACTGCCACTCGAGCTGCAGATCACTTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: QVTHLKARAQTG*PLPLELQITLY Trigger: GTATAAAGTGATCTGCAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACGGGCTTTGAGGTGGGTAACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | GAAGTCCCCTCAGGGAACAGTGGCTCACAAACGCTGTaGACCTGGAAGCACACATCACCATGGATCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EVPSGNSGSQTL*TWKHTSPWISR Trigger: TCTGGAGATCCATGGTGATGTGTGCTTCCAGGTCCACAGCGTTTGTGAGCCACTGTTCCCTGAGGGGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | TCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCTaGCTTGTGGTCAGTGTTCTAAAGAGACGGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPWTKGLITRAG*LVVSVLKRRLD Trigger: ATCCAGCCGTCTCTTTAGAACACTGACCACAAGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR GCA 72 bp | AGCTATCCCTTAGCAACAGGCACACCCAGCTGTATATaGACAGCTGCCTGCAGAGGGCAGAGAATCACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYPLATGTPSCI*TAACRGQRITK Trigger: CTTCGTGATTCTCTGCCCTCTGCAGGCAGCTGTGCATATACAGCTGGGTGTGCCTGTTGCTAAGGGATAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CCCGTGCACAGACAGGGTGGCCACTGCCACTCGAGCTaGAGATCACTTTATACTTTACCAAGAGTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PVHRQGGHCHSS*RSLYTLPRVRW Trigger: CCACCTAACTCTTGGTAAAGTATAAAGTGATCTGCAGCTCGAGTGGCAGTGGCCACCCTGTCTGTGCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | AGAGATGCCAGTGTGTCAGGGGGTAGGGAGACATGGTaGTTGTGCGGTCATCCTGGAACTATTCATGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RDASVSGGRETW*LCGHPGTIHGC Trigger: ACACCCATGAATAGTTCCAGGATGACCGCACAACCACCATGTCTCCCTACCCCCTGACACACTGGCATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR CCA 72 bp | TCAGAAATCCATTGGAGGTCCCAGAACAGGTCTCCATaGACCAAGGGGCTGATAACAAGGGCTGGCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SEIHWRSQNRSP*TKGLITRAGCL Trigger: AAGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGACCTCCAATGGATTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR CCA 72 bp | TTTACAGTCACTCTGGGGGAAGGGGGCTGGGTGGCATaGAGATCTGGTAAGAACCAGATCTTTAGGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTVTLGEGGWVA*RSGKNQIFRVR Trigger: CCTCACCCTAAAGATCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | AGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTGGGTaGCATGGAGATCTGGTAAGAACCAGATCTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RGLQSLWGKGAG*HGDLVRTRSLG Trigger: CCCTAAAGATCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | CATGGGAACCTTCAGAGTAACCTGTGCTGTCCTGACTaGCCTTCCGTTTCACACTGGCAAGACCTGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HGNLQSNLCCPD*PSVSHWQDLRD Trigger: ATCCCTCAGGTCTTGCCAGTGTGAAACGGAAGGCCAGTCAGGACAGCACAGGTTACTCTGAAGGTTCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | AACAAAGCTGGCCCCCAACACCACCAGCATCTCAGGTaGCAGACAGAAGGAACCACAGAGTTGCAAATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NKAGPQHHQHLR*QTEGTTELQMG Trigger: ACCCATTTGCAACTCTGTGGTTCCTTCTGTCTGTCACCTGAGATGCTGGTGGTGTTGGGGGCCAGCTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | CTTTATCTAGAGGGCAAAGTGAGAAGCAGGACACAGTaGGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LYLEGKVRSRTQ*EVYSHSGGRGL Trigger: CAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACTGTGTCCTGCTTCTCACTTTGCCCTCTAGATAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | GCCAGTGTGTCAGGGGGTAGGGAGACATGGTGGTTGTaGGGTCATCCTGGAACTATTCATGGGTGTATAACA | + |
|
Preference number: 3 (lower is better) Translates to: ASVSGGRETWWL*GHPGTIHGCIT Trigger: TGTTATACACCCATGAATAGTTCCAGGATGACCGCACAACCACCATGTCTCCCTACCCCCTGACACACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR GCA 72 bp | CTTAGCAACAGGCACACCCAGCTGTATATGCACAGCTaGCTGCAGAGGGCAGAGAATCACGAAGGCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSNRHTQLYMHS*LQRAENHEGRK Trigger: TTTTCTGCCTTCGTGATTCTCTGCCCTCTGCAGGCAGCTGTGCATATACAGCTGGGTGTGCCTGTTGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | AGAACTCACGTCTTAGGGACAGACCGGGTTTTAAAGTaGACTGATGATGGCGCTGGCGCTGGCACCATAACT | + |
|
Preference number: 3 (lower is better) Translates to: RTHVLGTDRVLK*TDDGAGAGTIT Trigger: AGTTATGGTGCCAGCGCCAGCGCCATCATCAGTGCACTTTAAAACCCGGTCTGTCCCTAAGACGTGAGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | AGTGAGAGGTTTACAGTCACTCTGGGGGAAGGGGGCTaGGTGGCATGGAGATCTGGTAAGAACCAGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SERFTVTLGEGG*VAWRSGKNQIF Trigger: AAAGATCTGGTTCTTACCAGATCTCCATGCCACCCAGCCCCCTTCCCCCAGAGTGACTGTAAACCTCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGAGCTGCAGAAGGCTCAGGGAGGCCAACCATGCACTTCGCTCTTTATTTGGGACCCATTCTCAGTaGCCAACAGCCTACGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: RESCRRLREANHALRSLFGTHSQ*PTAYVI Trigger: AATAACGTAGGCTGTTGGCAACTGAGAATGGGTCCC...AAATAAAGAGCGAAGTGCATGGTTGGCCTCCCTGAGCCTTCTGCAGCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | AGCTCAAACCAAGGCAAAGACAGAGATGAGGGAGGCTaGGCTCTGTGTCAAACGCCATTTCATGGGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSNQGKDRDEGG*ALCQTPFHGNL Trigger: AAGGTTCCCATGAAATGGCGTTTGACACAGAGCGCAGCCTCCCTCATCTCTGTCTTTGCCTTGGTTTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | AACATTCATCGTCTGACGATCACAGACCCAGTCATGTaGCTCAGTACAAGTTACCCACCTCAAAGCCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NIHRLTITDPVM*LSTSYPPQSPC Trigger: GCACGGGCTTTGAGGTGGGTAACTTGTACTGAGCCACATGACTGGGTCTGTGATCGTCAGACGATGAATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | GTGTCACTGCAGCCAATGTCATGCAATAGACAGGTGTaGACTGGAAACCAAGTGAAACACGGGAAAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSLQPMSCNRQV*TGNQVKHGKGA Trigger: TGCCCCTTTCCCGTGTTTCACTTGGTTTCCAGTCCACACCTGTCTATTGCATGACATTGGCTGCAGTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGTCCCAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCCTCCCGGGGACTTTATaGCGTTTTTATAACATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: WRSQNRSPWTKGLITRAGLPGTL*RFYNIY Trigger: ATAAATGTTATAAAAACGCAATAAAGTCCCCGGGAG...GCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGACCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAATGCCAGATCTCAGGACAACGAGCCAGCTTTACTTACAATAATTACCATCAGGCCCACCTGCGCTaGGGAGCTGCTTCTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKCQISGQRASFTYNNYHQAHLR*GAASVW Trigger: CCAAACAGAAGCAGCTCCCAAGCGCAGGTGGGCCTG...ATGGTAATTATTGTAAGTAAAGCTGGCTCGTTGTCCTGAGATCTGGCATTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCAGCAATTCCAAGTTTCCCGCATTCATGAAGTCCCCTCAGGGAACAGTGGAAGGAACCACAGAGTaGCAAATGGGTTTCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLSNSKFPAFMKSPQGTVEGTTE*QMGFRE Trigger: CTCTCTGAAACCCATTTGCAACTCTGTGGTTCCTTC...CACTGTTCCCTGAGGGGACTTCATGAATGCGGGAAACTTGGAATTGCTGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CTTCCACATGGCCCAGTGATCCTCTCTGTACTTTACTaGTGTGAACATCAGACTGTAGCAGGCAACTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPHGPVILSVLY*CEHQTVAGNYA Trigger: AGCATAGTTGCCTGCTACAGTCTGATGTTCACAGCAGTAAAGTACAGAGAGGATCACTGGGCCATGTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR GCA 72 bp | GGCGTGCACCACCACGCCCAGCTAGAGTTGTATTCTTaGAAAGAAGTCCTAAAAGTAGCTTCCAGAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GVHHHAQLELYS*KEVLKVASRIS Trigger: TGAGATTCTGGAAGCTACTTTTAGGACTTCTTTGCAAGAATACAACTCTAGCTGGGCGTGGTGGTGCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CTCCCCCACTACTCAGTGAGGGGACCCATTCTCAGTTaGCAACAGCCTACGTTATTTAGTCTTTACAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPHYSVRGPILS*QQPTLFSLYNV Trigger: CACATTGTAAAGACTAAATAACGTAGGCTGTTGGCAACTGAGAATGGGTCCCCTCACTGAGTAGTGGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | CCAAAACCAAGCCTCAAATGCTTCCACATGGCCCAGTaGTCCTCTCTGTACTTTACTGCTGTGAACATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKPSLKCFHMAQ*SSLYFTAVNIR Trigger: TCTGATGTTCACAGCAGTAAAGTACAGAGAGGATCACTGGGCCATGTGGAAGCATTTGAGGCTTGGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR TCA 72 bp | CTGTGCAGACAGAAACATCTGGAAACATTCATCGTCTaGCGATCACAGACCCAGTCATGTGGCTCAGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LCRQKHLETFIV*RSQTQSCGSVQ Trigger: TTGTACTGAGCCACATGACTGGGTCTGTGATCGTCAGACGATGAATGTTTCCAGATGTTTCTGTCTGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGAGCTGCAGAAGGCTCAGGGAGGCCAACCATGCACTTCGCTCTTTATTTATTTTAAGATGGGATTaGAATGTCTGTGACTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RESCRRLREANHALRSLFILRWD*NVCDCF Trigger: GAAGCAGTCACAGACATTCAAATCCCATCTTAAAAT...AAATAAAGAGCGAAGTGCATGGTTGGCCTCCCTGAGCCTTCTGCAGCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | CAGAACACTGATAAGCTAACAGGTGAGATAAAACTTTaGACCACAATCATTCAAGCTTCATGCCCCGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QNTDKLTGEIKL*TTIIQASCPGC Trigger: GCAGCCGGGGCATGAAGCTTGAATGATTGTGGTTCAAAGTTTTATCTCACCTGTTAGCTTATCAGTGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR GCA 72 bp | GCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATaGAATAGACAGGTGTGGACTGGAAACCAAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFKVTVSLQPMS*NRQVWTGNQVK Trigger: TTTCACTTGGTTTCCAGTCCACACCTGTCTATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CCA 72 bp | AGCTGCAGATCACTTTATACTTTACCAAGAGTTAGGTaGTCAGCAGCAAGTGACACCAAGACGGAAACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCRSLYTLPRVR*SAASDTKTETN Trigger: ATTAGTTTCCGTCTTGGTGTCACTTGCTGCTGACCACCTAACTCTTGGTAAAGTATAAAGTGATCTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | GTCACCTTGTATAGTAAGTATAGTGTTCCACAGTGCTaGGTGCCACTCACCATTAAGAATATCCTCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: VTLYSKYSVPQC*VPLTIKNILKT Trigger: GGTTTTGAGGATATTCTTAATGGTGAGTGGCACTCAGCACTGTGGAACACTATACTTACTATACAAGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR TCA 72 bp | CTTACAATAATTACCATTAAATCTATGTTAGGGCTGTaGGTGACTACGAGTGACTTCTGTGATGTCCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTIITIKSMLGL*VTTSDFCDVPG Trigger: CCCAGGGACATCACAGAAGTCACTCGTAGTCACTCACAGCCCTAACATAGATTTAATGGTAATTATTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR GCA 72 bp | CAGTCAGAGGACTTTATTACAGGGTATTGCAGCAACTaGTTCAGTTTATTTTCAGCTATTGCTGTTAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QSEDFITGYCSN*FSLFSAIAVSL Trigger: AAGGCTAACAGCAATAGCTGAAAATAAACTGAAGCAGTTGCTGCAATACCCTGTAATAAAGTCCTCTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR GCA 72 bp | CTTGAAACCCAGTCAGAGGACTTTATTACAGGGTATTaGAGCAACTGCTTCAGTTTATTTTCAGCTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LETQSEDFITGY*SNCFSLFSAIA Trigger: AGCAATAGCTGAAAATAAACTGAAGCAGTTGCTGCAATACCCTGTAATAAAGTCCTCTGACTGGGTTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| 3UTR CAA 72 bp | TACTACCACCACCTAACCCACCAGGCCCACCTGCGCTaGGGAGCTGCTTCTGTTTGGGGAAACGATAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: YYHHLTHQAHLR*GAASVWGNDST Trigger: CGTGCTATCGTTTCCCCAAACAGAAGCAGCTCCCAAGCGCAGGTGGGCCTGGTGGGTTAGGTGGTGGTAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CAA 72 bp | TCTCATCGTTGCCCCTCAAAATATCCAGTGAGAGGTTaGAGCTCGGGAGAAACGGGAGACGGTGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRCPSKYPVRG*SSGETGDGEPG Trigger: CCCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGGATATTTTGAGGGGCAACGATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAAACATTCATCGTCTGACGATCACAGACCCAGTCATGTGGCTCAGTACGGCAGACTCACCTGCTaGACTGCCTTGAATTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IWKHSSSDDHRPSHVAQYGRLTC*TALNSI Trigger: GATGGAATTCAAGGCAGTGCAGCAGGTGAGTCTGCC...GTACTGAGCCACATGACTGGGTCTGTGATCGTCAGACGATGAATGTTTCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCCACCAGGCAGTTGGGCTTTATCTAGAGGGCAAAGTGAGAAGCAGGACACCTGCTGCACTGCCTTaGATTCCATCTGTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIHQAVGLYLEGKVRSRTPAALP*IPSVTS Trigger: TGAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGG...TGTCCTGCTTCTCACTTTGCCCTCTAGATAAAGCCCAACTGCCTGGTGGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| 3UTR CAA 72 bp | AGGCGTGCACCACCACGCCCAGCTAGAGTTGTATTCTaGCAAAGAAGTCCTAAAAGTAGCTTCCAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAPPRPARVVF*QRSPKSSFQNL Trigger: GAGATTCTGGAAGCTACTTTTAGGACTTCTTTGCAAGAATACAACTCTAGCTGGGCGTGGTGGTGCACGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR GCA 90 bp | TGCTATAACCTCAGAACCACCTCTAGGCTCTCAACTGACCCACAACCCAAAACCCAATGGTCTCATCGTTaGCCCTCAAAATATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYNLRTTSRLSTDPQPKTQWSHR*PSKYPV Trigger: CACTGGATATTTTGAGGGGCAACGATGAGACCATTG...GGTTTTGGGTTGTGGGTCAGTTGAGAGCCTAGAGGTGGTTCTGAGGTTATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS-3UTR GCA 90 bp | TCACTCAGGAGGCCTTTAAAGTTACAGTGTCACTGCAGCCAATGTCATGCAATAAGAGGCAGACTCACCTaGTGCACTGCCTTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRRPLKLQCHCSQCHAIRGRLT*CTALNS Trigger: GGAATTCAAGGCAGTGCAGCAGGTGAGTCTGCCTCT...TATTGCATGACATTGGCTGCAGTGACACTGTAACTTTAAAGGCCTCCTGAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR CCA 90 bp | ACAACCCAAAACCAAGCCTCAAATGCTTCCACATGGCCCAGTGATCCTCTCTGTGGATGTTCCTCAGCGTaGAAAAGTTCATCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTQNQASNASTWPSDPLCGCSSA*KSSSCP Trigger: AGGACAAGATGAACTTTTCCACGCTGAGGAACATCC...ACAGAGAGGATCACTGGGCCATGTGGAAGCATTTGAGGCTTGGTTTTGGGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS-3UTR CCA 90 bp | ACAACCCAAAACCAAGCCTCAAATGCTTCCACATGGCCCAGTGATCCTCTCTGTTATCCTCAAAACCAATaGTCTCATCGTTGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTQNQASNASTWPSDPLCYPQNQ*SHRCPS Trigger: TGAGGGGCAACGATGAGACCATTGGTTTTGAGGATA...ACAGAGAGGATCACTGGGCCATGTGGAAGCATTTGAGGCTTGGTTTTGGGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCCACATGGCCCAGTGATCCTCTCTGTACTTTACTGCTGTGAACATCAGGATAACTCGAGAGGGTaGCTGGGCAAAAGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MLPHGPVILSVLYCCEHQDNSRG*LGKSSF Trigger: AAATGAACTTTTGCCCAGTCACCCTCTCGAGTTATC...CTGATGTTCACAGCAGTAAAGTACAGAGAGGATCACTGGGCCATGTGGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| CDS-3UTR CCA 90 bp | GATGACTCACAGTTACCAATGAGCTCTGGCTGTTCTTCCAGGAAAACCAGGCTAGGATGTTCCTCAGCGTaGAAAAGTTCATCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DDSQLPMSSGCSSRKTRLGCSSA*KSSSCP Trigger: AGGACAAGATGAACTTTTCCACGCTGAGGAACATCC...TAGCCTGGTTTTCCTGGAAGAACAGCCAGAGCTCATTGGTAACTGTGAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTTGCAAATGGGTTTCAGAGAGGAAGGGGACACCAATTTAAGGTCTATGATAACTCGAGAGGGTaGCTGGGCAAAAGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HRVANGFQRGRGHQFKVYDNSRG*LGKSSF Trigger: AAATGAACTTTTGCCCAGTCACCCTCTCGAGTTATC...ATAGACCTTAAATTGGTGTCCCCTTCCTCTCTGAAACCCATTTGCAACTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTGATACATAACTTAAAACCAAGTGACCTGTACCTTCCTTCCACAGAACACCCTGCTGCACTGCCTTaGATTCCATCTGTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLIHNLKPSDLYLPSTEHPAALP*IPSVTS Trigger: TGAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGG...GTGTTCTGTGGAAGGAAGGTACAGGTCACTTGGTTTTAAGTTATGTATCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS TCA 90 bp | AAACCCTTTCCGGAGAAGATCGTGACTCTCGAAAGGCCCGCTGGCTaGGAGCTCCGCGACTGGAATACTGTCCTTCAGCTCCGACCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPFPEKIVTLERPAG*ELRDWNTVLQLRPK Trigger: CTTGGGTCGGAGCTGAAGGACAGTATTCCAGTCGCGGAGCTCTCAGCCAGCGGGCCTTTCGAGAGTCACGATCTTCTCCGGAAAGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
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| CDS-3UTR CAA 90 bp | CTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGTGGAAAAGTTCATCTaGTCCTGGTTGAGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LASNSEIRLPLPLPPECWVEKFI*SWLSWK Trigger: CTTCCAGCTCAACCAGGACAAGATGAACTTTTCCAC...CCAGCACTCGGGAGGCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAGAACAGGTCTCCATGGACCAAGGGGCTGATAACAAGGGCTGGCTGCCTTATCCAGTGAGAGGTTaGAGCTCGGGAGAAACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPEQVSMDQGADNKGWLPYPVRG*SSGETG Trigger: TCCCGTTTCTCCCGAGCTCAAACCTCTCACTGGATA...AGGCAGCCAGCCCTTGTTATCAGCCCCTTGGTCCATGGAGACCTGTTCTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| CDS GCA 90 bp | CACCATGAGAACATCGGCACAAGGGACAGAGGCAGACTCACCTGCTaGACTGCCTTGAATTCCATCTGTAACTTCAGGGGAGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHENIGTRDRGRLTC*TALNSICNFRGANR Trigger: TCTGTTTGCTCCCCTGAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGGTGAGTCTGCCTCTGTCCCTTGTGCCGATGTTCTCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| CDS CCA 90 bp | ACTGCCTTGAATTCCATCTGTAACTTCAGGGGAGCAAACAGACCCTaGATGTTCCTCAGCGTGGAAAAGTTCATCTTGTCCTGGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TALNSICNFRGANRP*MFLSVEKFILSWLS Trigger: GCTCAACCAGGACAAGATGAACTTTTCCACGCTGAGGAACATCCAGGGTCTGTTTGCTCCCCTGAAGTTACAGATGGAATTCAAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
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| CDS-3UTR CAA 90 bp | TGCTATAACCTCAGAACCACCTCTAGGCTCTCAACTGACCCACAACCCAAAACCGTGGAAAAGTTCATCTaGTCCTGGTTGAGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CYNLRTTSRLSTDPQPKTVEKFI*SWLSWK Trigger: CTTCCAGCTCAACCAGGACAAGATGAACTTTTCCAC...GGTTTTGGGTTGTGGGTCAGTTGAGAGCCTAGAGGTGGTTCTGAGGTTATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| CDS-3UTR CAA 90 bp | ACCACCTCTAGGCTCTCAACTGACCCACAACCCAAAACCAAGCCTCAAATGCTTCCAATGGTCTCATCGTaGCCCCTCAAAATATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTSRLSTDPQPKTKPQMLPMVSS*PLKISS Trigger: ACTGGATATTTTGAGGGGCAACGATGAGACCATTGG...AAGCATTTGAGGCTTGGTTTTGGGTTGTGGGTCAGTTGAGAGCCTAGAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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| CDS-3UTR CAA 90 bp | CAGAATGAATGGATGACTGTTAAACTGACTGAAATGCCAGATCTCAGGACAACGACCTGCTGCACTGCCTaGAATTCCATCTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNEWMTVKLTEMPDLRTTTCCTA*NSICNF Trigger: GAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGGT...CGTTGTCCTGAGATCTGGCATTTCAGTCAGTTTAACAGTCATCCATTCATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
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| CDS-3UTR CAA 90 bp | ACCTTGATACATAACTTAAAACCAAGTGACCTGTACCTTCCTTCCACAGAACACACCTGCTGCACTGCCTaGAATTCCATCTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLIHNLKPSDLYLPSTEHTCCTA*NSICNF Trigger: GAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGGT...GTGTTCTGTGGAAGGAAGGTACAGGTCACTTGGTTTTAAGTTATGTATCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS TCA 72 bp | CCGGAGAAGATCGTGACTCTCGAAAGGCCCGCTGGCTaGGAGCTCCGCGACTGGAATACTGTCCTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEKIVTLERPAG*ELRDWNTVLQL Trigger: GAGCTGAAGGACAGTATTCCAGTCGCGGAGCTCTCAGCCAGCGGGCCTTTCGAGAGTCACGATCTTCTCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
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| CDS CCA 72 bp | CTTTCCGGAGAAGATCGTGACTCTCGAAAGGCCCGCTaGCTGAGAGCTCCGCGACTGGAATACTGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSGEDRDSRKAR*LRAPRLEYCPS Trigger: TGAAGGACAGTATTCCAGTCGCGGAGCTCTCAGCCAGCGGGCCTTTCGAGAGTCACGATCTTCTCCGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
||
| CDS TCA 72 bp | TTTTTCACACAAGAAAACCCTTTCCGGAGAAGATCGTaGCTCTCGAAAGGCCCGCTGGCTGAGAGCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: FFTQENPFRRRS*LSKGPLAESSA Trigger: CGCGGAGCTCTCAGCCAGCGGGCCTTTCGAGAGTCACGATCTTCTCCGGAAAGGGTTTTCTTGTGTGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
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| CDS CAA 90 bp | AACCAATGGTCTCATCGTTGCCCCTCAAAATATCCAGTGAGAGGTTaGAGCTCGGGAGAAACGGGAGACGGTGAACCTGCTGCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NQWSHRCPSKYPVRG*SSGETGDGEPAALP Trigger: AGGCAGTGCAGCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGGATATTTTGAGGGGCAACGATGAGACCATTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS GCA 72 bp | AACATCGGCACAAGGGACAGAGGCAGACTCACCTGCTaGACTGCCTTGAATTCCATCTGTAACTTCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NIGTRDRGRLTC*TALNSICNFRG Trigger: TCCCCTGAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGGTGAGTCTGCCTCTGTCCCTTGTGCCGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS GCA 72 bp | GAGAACATCGGCACAAGGGACAGAGGCAGACTCACCTaGTGCACTGCCTTGAATTCCATCTGTAACTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ENIGTRDRGRLT*CTALNSICNFR Trigger: CCTGAAGTTACAGATGGAATTCAAGGCAGTGCAGCAGGTGAGTCTGCCTCTGTCCCTTGTGCCGATGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201120.2 |
||
| CDS CAA 72 bp | TCTCATCGTTGCCCCTCAAAATATCCAGTGAGAGGTTaGAGCTCGGGAGAAACGGGAGACGGTGAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHRCPSKYPVRG*SSGETGDGEPA Trigger: AGCAGGTTCACCGTCTCCCGTTTCTCCCGAGCTCAAACCTCTCACTGGATATTTTGAGGGGCAACGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
||
| CDS CCA 72 bp | AATTCCATCTGTAACTTCAGGGGAGCAAACAGACCCTaGATGTTCCTCAGCGTGGAAAAGTTCATCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NSICNFRGANRP*MFLSVEKFILS Trigger: GGACAAGATGAACTTTTCCACGCTGAGGAACATCCAGGGTCTGTTTGCTCCCCTGAAGTTACAGATGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031654.10 ENSMUST00000201120.2 ENSMUST00000201376.4 |
||
| CDS TCA 72 bp | CACCATCACGTGGGGCTCACCCATCAGTTCACTTTGTaGTGGATCATTAAGAATATCCTCAAAACCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HHHVGLTHQFTL*WIIKNILKTNG Trigger: ACCATTGGTTTTGAGGATATTCTTAATGATCCATCACAAAGTGAACTGATGGGTGAGCCCCACGTGATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031654.10 |
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