Pregenerated sensors for POMK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037251Ensembl transcript IDs: ENSMUST00000061850.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTaGCAGCTTCCATCCGGGCTGCCAGGAGAGCAGAACACTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: SASSPGSILKPGFLA*QLPSGLPGEQNTQT Trigger: TGTTTGAGTGTTCTGCTCTCCTGGCAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | ACATGCCATGGGTCAGATCCAAGGCTTTGCACACAACTAGGCAAGTaGCCTGCCACGGAGTTAAAACATCCCCAGCTTCCAACAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TCHGSDPRLCTQLGK*PATELKHPQLPTGL Trigger: AAGCCCTGTTGGAAGCTGGGGATGTTTTAACTCCGTGGCAGGGCACTTGCCTAGTTGTGTGCAAAGCCTTGGATCTGACCCATGGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | GAGCATTTGTGTGTGTGCACATGCCATGGGTCAGATCCAAGGCTTTaGACACAACTAGGCAAGTGCCCTGCCACGGAGTTAAAACATCCC | + |
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Preference number: 1 (lower is better) Translates to: EHLCVCTCHGSDPRL*TQLGKCPATELKHP Trigger: GGGATGTTTTAACTCCGTGGCAGGGCACTTGCCTAGTTGTGTGCAAAGCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | CACCGTTTGATCACTCCCTTGAAACTATGCAGATCCAGAATCCTCTaGATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTG | + |
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Preference number: 1 (lower is better) Translates to: HRLITPLKLCRSRIL*IFTREHPEARLSRL Trigger: CAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGGAGTGATCAAACGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | GGCACACTTCTGGCGTCTGGGATTTTCTTTGAGCATTTGTGTGTGTaGACATGCCATGGGTCAGATCCAAGGCTTTGCACACAACTAGGC | + |
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Preference number: 1 (lower is better) Translates to: GTLLASGIFFEHLCV*TCHGSDPRLCTQLG Trigger: GCCTAGTTGTGTGCAAAGCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | CTTCTGGCGTCTGGGATTTTCTTTGAGCATTTGTGTGTGTGCACATaGCATGGGTCAGATCCAAGGCTTTGCACACAACTAGGCAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LLASGIFFEHLCVCT*HGSDPRLCTQLGKC Trigger: GCACTTGCCTAGTTGTGTGCAAAGCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 90 bp | AAGTTCACCCTCCAATCAGCCACGGGGTACAGAAGACGGAGACAATaGCAGCGTCACCTATTTCTTTTGTCTGTTGTACCTGTTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KFTLQSATGYRRRRQ*QRHLFLLSVVPVCL Trigger: GAGGCAAACAGGTACAACAGACAAAAGAAATAGGTGACGCTGGCATTGTCTCCGTCTTCTGTACCCCGTGGCTGATTGGAGGGTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 90 bp | GAAGCGGGGTGGGTTGTTGTTTGCTGTTGGTCGGTGTTTGTGAAGTaGTCGTGGGCGAAGAAGAAACAAGAAGAAATGAGATATCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: EAGWVVVCCWSVFVK*SWAKKKQEEMRYLG Trigger: GCCAAGATATCTCATTTCTTCTTGTTTCTTCTTCGCCCACGACCACTTCACAAACACCGACCAACAGCAAACAACAACCCACCCCGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR TCA 90 bp | TTATTGACAAGAAAGGGGCACACTTCTGGCGTCTGGGATTTTCTTTaGGCATTTGTGTGTGTGCACATGCCATGGGTCAGATCCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LLTRKGHTSGVWDFL*AFVCVHMPWVRSKA Trigger: AGCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 90 bp | TCCGGTACTGACAATGACCTTATTGACAAGAAAGGGGCACACTTCTaGCGTCTGGGATTTTCTTTGAGCATTTGTGTGTGTGCACATGCC | + |
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Preference number: 1 (lower is better) Translates to: SGTDNDLIDKKGAHF*RLGFSLSICVCAHA Trigger: GGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAAGGTCATTGTCAGTACCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 90 bp | ATTCATGAACTTCATTCTAGATCTGTGAAGCTAGAGACTCTGAGGTaGGCCCCGATCTGTGACTCAAGGAGAAGACAAGAGGCACCTTAT | + |
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Preference number: 1 (lower is better) Translates to: IHELHSRSVKLETLR*APICDSRRRQEAPY Trigger: ATAAGGTGCCTCTTGTCTTCTCCTTGAGTCACAGATCGGGGCCCACCTCAGAGTCTCTAGCTTCACAGATCTAGAATGAAGTTCATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CAA 90 bp | CTCTGCATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTaGGCAGCTTCCATCCGGGCTGCCAGGAGAGCAGAACACTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LCIFTREHPEARLSR*AASIRAARRAEHSN Trigger: GTTTGAGTGTTCTGCTCTCCTGGCAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTGTTAAGTTCCCACGAGCAACATAGCAAGGGTTCCAATTACTCCATGTCCATAACCCTGAACTCCTaGTTCCTCCTGTCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALLSSHEQHSKGSNYSMSITLNS*FLLSPR Trigger: CCTGGGAGACAGGAGGAACCAGGAGTTCAGGGTTAT...GGACATGGAGTAATTGGAACCCTTGCTATGTTGCTCGTGGGAACTTAACAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CAA 90 bp | CTTATTGACAAGAAAGGGGCACACTTCTGGCGTCTGGGATTTTCTTaGAGCATTTGTGTGTGTGCACATGCCATGGGTCAGATCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LIDKKGAHFWRLGFS*SICVCAHAMGQIQG Trigger: GCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGTGATTCTATGGCGGAACAGCTGGGATaGCATTCAGCCATCAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLYLFASKRQFVSDGDSMAEQLG*HSAIKH Trigger: GTGCTTGATGGCTGAATGGCATCCCAGCTGTTCCGC...CATAGAATCACCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAAAGCACCATTCAAGGCAGGTAAGAAAGTTCCTTCAACTTGCTGTTCCACCCCGAGAAGCGGGGTaGGTTGTTGTTTGCTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: SSKHHSRQVRKFLQLAVPPREAG*VVVCCW Trigger: CCAACAGCAAACAACAACCCACCCCGCTTCTCGGGG...TGGAACAGCAAGTTGAAGGAACTTTCTTACCTGCCTTGAATGGTGCTTTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CAA 90 bp | ACGGGGTACAGAAGACGGAGACAATGCCAGCGTCACCTATTTCTTTaGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TGYRRRRQCQRHLFL*SVVPVCLKEAIRLR Trigger: TCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAATAGGTGACGCTGGCATTGTCTCCGTCTTCTGTACCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTTGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGCTCCTGTCTCCCAGGTaGTGGGATTACAGGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FLLSVVPVCLKEAIRLRWLLSPR*WDYRWV Trigger: TACCCACCTGTAATCCCAGCACCTGGGAGACAGGAG...CCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTAGACAGCCACAATCTCAAGAGCATGCTATCTTGGTGCACTTTGGTTTCACGACCATGCACACTTaGCTCAGTGACACGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ISRQPQSQEHAILVHFGFTTMHT*LSDTSQ Trigger: CTGACTCGTGTCACTGAGCCAAGTGTGCATGGTCGT...GAAACCAAAGTGCACCAAGATAGCATGCTCTTGAGATTGTGGCTGTCTAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGACAATGACCTTATTGACAAGAAAGGGGCACACTTCTGGCGTCTGGGATTTTCAGATCCAAGGCTTTaGACACAACTAGGCAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TDNDLIDKKGAHFWRLGFSDPRL*TQLGKC Trigger: GCACTTGCCTAGTTGTGTGCAAAGCCTTGGATCTGA...AAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAAGGTCATTGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAAAAGGGGCACACTTCTaGCGTCTGGGATTTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAQETCYKFMNFILKGAHF*RLGFSL Trigger: CAAAGAAAATCCCAGACGCCAGAAGTGTGCCCCTTT...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CAA 90 bp | TATAAAAAGTTACCAAGGCAGGCAGCATGTCTTCAAGGTCACCGTTaGATCACTCCCTTGAAACTATGCAGATCCAGAATCCTCTGCATC | + |
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Preference number: 2 (lower is better) Translates to: YKKLPRQAACLQGHR*ITPLKLCRSRILCI Trigger: GATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGGAGTGATCAAACGGTGACCTTGAAGACATGCTGCCTGCCTTGGTAACTTTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAAGAAGAAATTGTCTCTaGGGAACTAGTGGGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAQETCYKFMNFILRRNCL*GTSGLS Trigger: GGACAACCCACTAGTTCCTCAGAGACAATTTCTTCT...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | TTAATCAGCAAGAAGTCGTCCAACAATATAACAGTGCCCACTTTCCTTTCTCTCTTGTGTGTGTGCACATaGCATGGGTCAGATCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LISKKSSNNITVPTFLSLLCVCT*HGSDPR Trigger: CCTTGGATCTGACCCATGGCATGTGCACACACACAA...GAGAGAAAGGAAAGTGGGCACTGTTATATTGTTGGACGACTTCTTGCTGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTTGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGTGCTGGGATTACAGGTaGGTACCATTATTCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FLLSVVPVCLKEAIRLRWCWDYR*VPLFLA Trigger: AGCCAGGAATAATGGTACCCACCTGTAATCCCAGCA...CCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CAA 90 bp | GAAGAAGAAACAAGAAGAAATGAGATATCTTGGCAGCAAAGATCATaGCTCCAAGGAACTCGACACCCCTTAATCAGCAAGAAGTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: EEETRRNEISWQQRS*LQGTRHPLISKKSS Trigger: GGACGACTTCTTGCTGATTAAGGGGTGTCGAGTTCCTTGGAGCAATGATCTTTGCTGCCAAGATATCTCATTTCTTCTTGTTTCTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCCACCAGTGTTAACGGATAATGTGAACAAGTTTTTGATCCTCCTGGGTTTAATTCGTCTCAGATGGTaGTTCTATGAGGAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VPPVLTDNVNKFLILLGLIRLRW*FYEEEE Trigger: TTCCTCCTCCTCATAGAATCACCATCTGAGACGAAT...TAAACCCAGGAGGATCAAAAACTTGTTCACATTATCCGTTAACACTGGTGGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAGTCAACATCCATCCATaGAAAGCTCTTCCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAQETCYKFMNFILVNIHP*KALPSS Trigger: TGATGATGGAAGAGCTTTGCATGGATGGATGTTGAC...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAGATCTGACTCCCTTGAAACTATaGAGATCCAGAATCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AAAAQETCYKFMNFILDLTPLKL*RSRILC Trigger: GCAGAGGATTCTGGATCTGCATAGTTTCAAGGGAGT...CAGATCTAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAAGAAACAAGAAGAAATaGGATATCTTGGCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAQETCYKFMNFILRNKKK*DILAAK Trigger: CTTTGCTGCCAAGATATCTCATTTCTTCTTGTTTCT...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | TCACCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTaGCAGCTTCCATCCGGGCTGCCAGGAGAGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SPGSILKPGFLA*QLPSGLPGEQN Trigger: GTTCTGCTCTCCTGGCAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | AGCCAGGCTTTCTCGCTTGGCAGCTTCCATCCGGGCTaGCAGGAGAGCAGAACACTCAAACATGCAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SQAFSLGSFHPG*QESRTLKHAGR Trigger: TCTGCCTGCATGTTTGAGTGTTCTGCTCTCCTGGCAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | GGGTCATGTGTGCTTCAAGGGCCAGCTCAGATACCCTaGAAGTTCACCCTCCAATCAGCCACGGGGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: GSCVLQGPAQIP*KFTLQSATGYR Trigger: TCTGTACCCCGTGGCTGATTGGAGGGTGAACTTGCAGGGTATCTGAGCTGGCCCTTGAAGCACACATGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR TCA 72 bp | ATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTaGAGCCAGGCTTTCTCGCTTGGCAGCTTCCATCCG | + |
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Preference number: 3 (lower is better) Translates to: IQNPLHLHQGAS*SQAFSLGSFHP Trigger: CGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR TCA 72 bp | AAACATGCAGGCAGACGTAGAGGAGGCCTACGTGGCTaGACAGCCAGGGTCAACATCCATCCATGCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: KHAGRRRGGLRG*TARVNIHPCKA Trigger: AGCTTTGCATGGATGGATGTTGACCCTGGCTGTTCAGCCACGTAGGCCTCCTCTACGTCTGCCTGCATGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | GGGTCAGATCCAAGGCTTTGCACACAACTAGGCAAGTaGCCTGCCACGGAGTTAAAACATCCCCAGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: GSDPRLCTQLGK*PATELKHPQLP Trigger: TGGAAGCTGGGGATGTTTTAACTCCGTGGCAGGGCACTTGCCTAGTTGTGTGCAAAGCCTTGGATCTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | AAAGCTCTTCCATCATCAAGAGCGGAACAGCTGGGATaGCATTCAGCCATCAAGCACGTCACTCGATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: KALPSSRAEQLG*HSAIKHVTRWL Trigger: GAGCCATCGAGTGACGTGCTTGATGGCTGAATGGCATCCCAGCTGTTCCGCTCTTGATGATGGAAGAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | CATGCAAAGCTCTTCCATCATCAAGAGCGGAACAGCTaGGATGCCATTCAGCCATCAAGCACGTCACTCGAT | + |
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Preference number: 3 (lower is better) Translates to: HAKLFHHQERNS*DAIQPSSTSLD Trigger: ATCGAGTGACGTGCTTGATGGCTGAATGGCATCCCAGCTGTTCCGCTCTTGATGATGGAAGAGCTTTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR-3UTR CAA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAGAGAAGCGGGGTGGGTaGTTGTTTGCTGTTGGTCGG | + |
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Preference number: 3 (lower is better) Translates to: AAAAAAQETCYKFMNFILEKRGG*LFAVGR Trigger: CCGACCAACAGCAAACAACAACCCACCCCGCTTCTC...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR TCA 72 bp | CGGGGTGGGTTGTTGTTTGCTGTTGGTCGGTGTTTGTaGAGTGGTCGTGGGCGAAGAAGAAACAAGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: RGGLLFAVGRCL*SGRGRRRNKKK Trigger: TTTCTTCTTGTTTCTTCTTCGCCCACGACCACTTCACAAACACCGACCAACAGCAAACAACAACCCACCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | ATCACTCCCTTGAAACTATGCAGATCCAGAATCCTCTaGATCTTCACCAGGGAGCATCCTGAAGCCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ITPLKLCRSRIL*IFTREHPEARL Trigger: AAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGGAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | CTGGCGTCTGGGATTTTCTTTGAGCATTTGTGTGTGTaGACATGCCATGGGTCAGATCCAAGGCTTTGCACA | + |
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Preference number: 3 (lower is better) Translates to: LASGIFFEHLCV*TCHGSDPRLCT Trigger: TGTGCAAAGCCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | CTCCAATCAGCCACGGGGTACAGAAGACGGAGACAATaGCAGCGTCACCTATTTCTTTTGTCTGTTGTACCT | + |
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Preference number: 3 (lower is better) Translates to: LQSATGYRRRRQ*QRHLFLLSVVP Trigger: AGGTACAACAGACAAAAGAAATAGGTGACGCTGGCATTGTCTCCGTCTTCTGTACCCCGTGGCTGATTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | CTTCATTCTAGATCTGTGAAGCTAGAGACTCTGAGGTaGGCCCCGATCTGTGACTCAAGGAGAAGACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LHSRSVKLETLR*APICDSRRRQE Trigger: CTCTTGTCTTCTCCTTGAGTCACAGATCGGGGCCCACCTCAGAGTCTCTAGCTTCACAGATCTAGAATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | CTTCAAGGTCACCGTTTGATCACTCCCTTGAAACTATaGAGATCCAGAATCCTCTGCATCTTCACCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LQGHRLITPLKL*RSRILCIFTRE Trigger: CTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGGAGTGATCAAACGGTGACCTTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | AGAGCAGACTTTGTACTTTCCGGTACAGGGGGACACTaGATAGAAATATTCACACAGAAACTCCAGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: RADFVLSGTGGH*IEIFTQKLQVS Trigger: GCTGACCTGGAGTTTCTGTGTGAATATTTCTATCCAGTGTCCCCCTGTACCGGAAAGTACAAAGTCTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR GCA 72 bp | TGTTTTTGTTTTAATCTCAGGTGTGGGATGCCAGGCTaGTTCAGACTGTCCACAGCAGCTGACTATGATTTG | + |
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Preference number: 3 (lower is better) Translates to: CFCFNLRCGMPG*FRLSTAADYDL Trigger: CAAATCATAGTCAGCTGCTGTGGACAGTCTGAAGCAGCCTGGCATCCCACACCTGAGATTAAAACAAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | TGGGTTGTTGTTTGCTGTTGGTCGGTGTTTGTGAAGTaGTCGTGGGCGAAGAAGAAACAAGAAGAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: WVVVCCWSVFVK*SWAKKKQEEMR Trigger: TCTCATTTCTTCTTGTTTCTTCTTCGCCCACGACCACTTCACAAACACCGACCAACAGCAAACAACAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| 3UTR CCA 72 bp | GACAATGACCTTATTGACAAGAAAGGGGCACACTTCTaGCGTCTGGGATTTTCTTTGAGCATTTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DNDLIDKKGAHF*RLGFSLSICVC Trigger: ACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAAGGTCATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACAAGAGGCACCTTATGAGAGACCATTAATACATGTCAGATTTCTCATGTCTCTGACAATGACCTTATaGACAAGAAAGGGGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: RQEAPYERPLIHVRFLMSLTMTL*TRKGHT Trigger: AGTGTGCCCCTTTCTTGTCAATAAGGTCATTGTCAG...AGACATGAGAAATCTGACATGTATTAATGGTCTCTCATAAGGTGCCTCTTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTTTGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGGAAAGTTCCTTCAACTaGCTGTTCCAAAAATCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLSVVPVCLKEAIRLRWESSFN*LFQKSL Trigger: TAGAGATTTTTGGAACAGCAAGTTGAAGGAACTTTC...CCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACAAGAGGCACCTTATGAGAGACCATTAATACATGTCAGATTTCTCATGTCTATTTTCTTTGAGCATTaGTGTGTGTGCACATGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RQEAPYERPLIHVRFLMSIFFEH*CVCTCH Trigger: ATGGCATGTGCACACACACAAATGCTCAAAGAAAAT...AGACATGAGAAATCTGACATGTATTAATGGTCTCTCATAAGGTGCCTCTTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTGGCAGCTTCCATCCGGGCTGTACTCCATGGCCAGCTaGAGCCTGTGCTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSILKPGFLAWQLPSGLYSMAS*SLCCQV Trigger: CACTTGGCAGCACAGGCTGCAGCTGGCCATGGAGTA...CAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | GTGCTAGGGCCCCCGAGAAGCGGGGTGGGTTGTTGTTaGCTGTTGGTCGGTGTTTGTGAAGTGGTCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGPPRSGVGCC*LLVGVCEVVVG Trigger: GCCCACGACCACTTCACAAACACCGACCAACAGCAAACAACAACCCACCCCGCTTCTCGGGGGCCCTAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTGGCAGCTTCCATCCGGGCTGAGCAGTGGGTCTTTCTaGCGGGATCTGGCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGSILKPGFLAWQLPSGLSSGSF*RDLALA Trigger: TGCAAGAGCCAGATCCCGGCAGAAAGACCCACTGCT...CAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | TTCACCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTaGGCAGCTTCCATCCGGGCTGCCAGGAGAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTREHPEARLSR*AASIRAARRAE Trigger: TTCTGCTCTCCTGGCAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGCATCCTGAAGCCAGGCTTTCTCGCTTGGCAGCTTCCATCCGGGCTGGCCCCAAGAGGAAACTaGAGACATCTGGAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSILKPGFLAWQLPSGLAPRGN*RHLESS Trigger: GGAAGATTCCAGATGTCTCCAGTTTCCTCTTGGGGC...CAGCCCGGATGGAAGCTGCCAAGCGAGAAAGCCTGGCTTCAGGATGCTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTGCGTCTAGCACGTTCTaGGCAGTGGGTCTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRSRILCIFTREHPEARLASSTF*AVGLSA Trigger: GGCAGAAAGACCCACTGCTCAGAACGTGCTAGACGC...AAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTTCCATCATCAAGAGCGGAACAGCTGGGATGCCATTCAGCCATCAAGCCCAACGCGCTTCAGCTaGCTGACTTCTGTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFHHQERNSWDAIQPSSPTRFS*LTSVLS Trigger: GCTGAGGACAGAAGTCAGGCAGCTGAAGCGCGTTGG...GCTTGATGGCTGAATGGCATCCCAGCTGTTCCGCTCTTGATGATGGAAGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | TGCAGATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTAGCATCTGCAGCCCATaGAGGAAGTCCTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CRSRILCIFTREHPEARLSICSP*RKSSFI Trigger: GATGAAGGAGGACTTCCTGCATGGGCTGCAGATGCT...AAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | TGCAGATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTGAAGCCAGGCTTAGAGACTTCAGCATCTaGAGCCCATGCAGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRSRILCIFTREHPEARLRDFSI*SPCRKS Trigger: GGACTTCCTGCATGGGCTGCAGATGCTGAAGTCTCT...AAGCCTGGCTTCAGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAAACTATGCAGATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTGGGCCACAGCTGCTCTaGAGCCACAAAATCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLKLCRSRILCIFTREHPGPQLL*SHKIPM Trigger: CATGGGGATTTTGTGGCTCCAGAGCAGCTGTGGCCC...AGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTTCCATCATCAAGAGCGGAACAGCTGGGATGCCATTCAGCCATCAAGCGGAGCTCTCTATGCGTaGGACCATTCCTGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLFHHQERNSWDAIQPSSGALYA*DHSWFH Trigger: ATGGAACCAGGAATGGTCTCACGCATAGAGAGCTCC...GCTTGATGGCTGAATGGCATCCCAGCTGTTCCGCTCTTGATGATGGAAGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAAACTATGCAGATCCAGAATCCTCTGCATCTTCACCAGGGAGCATCCTCGGGGGAGCTCTCTATaGGTGAGACCATTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKLCRSRILCIFTREHPRGSSL*VRPFLV Trigger: AACCAGGAATGGTCTCACGCATAGAGAGCTCCCCCG...AGGATGCTCCCTGGTGAAGATGCAGAGGATTCTGGATCTGCATAGTTTCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | ATCCATCCATGCAAAGCTCTTCCATCATCAAGAGCGGAACAGCTGGGATGCCATTCACTCCCTTCCACGTaGCCCAAGAGGAAACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHPCKALPSSRAEQLGCHSLPST*PKRKLE Trigger: CTCCAGTTTCCTCTTGGGGCACGTGGAAGGGAGTGA...ATGGCATCCCAGCTGTTCCGCTCTTGATGATGGAAGAGCTTTGCATGGATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | TTCACACAGAAACTCCAGGTCAGCAGGAAGTTCAAAGCACCATTCAAGGCAGGTAGCTGCAGCCTGTGCTaGCAAGTGTTCACGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTQKLQVSRKFKAPFKAGSCSLC*QVFTSW Trigger: CCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCT...ACCTGCCTTGAATGGTGCTTTGAACTTCCTGCTGACCTGGAGTTTCTGTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | GGCACACTTCTGGCGTCTGGGATTTTCTTTGAGCATTaGTGTGTGTGCACATGCCATGGGTCAGATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLLASGIFFEH*CVCTCHGSDPR Trigger: CCTTGGATCTGACCCATGGCATGTGCACACACACAAATGCTCAAAGAAAATCCCAGACGCCAGAAGTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCACCAGTGTTAACGGATAATGTGAACAAGTTTTTGATCCTCCTGGGTTTAACAGGACAGCCAGCGTaGGCAGTTTCTCATCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPPVLTDNVNKFLILLGLTGQPA*AVSHPP Trigger: GGGCGGATGAGAAACTGCTCACGCTGGCTGTCCTGT...TAAACCCAGGAGGATCAAAAACTTGTTCACATTATCCGTTAACACTGGTGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCACCAGTGTTAACGGATAATGTGAACAAGTTTTTGATCCTCCTGGGTTTACGCGCTTCAGCTGCCTaGCTTCTGTCCTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPVLTDNVNKFLILLGLRASAA*LLSSAL Trigger: AAGAGCTGAGGACAGAAGTCAGGCAGCTGAAGCGCG...TAAACCCAGGAGGATCAAAAACTTGTTCACATTATCCGTTAACACTGGTGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | GCACTGTTAAGTTCCCACGAGCAACATAGCAAGGGTTCCAATTACTCCATGTCCCGTTTGCCACAATGCTaGAGTTACTTGTTAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSSHEQHSKGSNYSMSRLPQC*SYLLAG Trigger: ACCTGCTAACAAGTAACTTCAGCATTGTGGCAAACG...GGACATGGAGTAATTGGAACCCTTGCTATGTTGCTCGTGGGAACTTAACAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGTCGGTGTTTGTGAAGTGGTCGTGGGCGAAGAAGAAACAAGAAGAAATAGCGTCCAGGTCGTTTaGCACAATGCTGAAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLVGVCEVVVGEEETRRNSVQVV*HNAEVT Trigger: AGTAACTTCAGCATTGTGGCAAACGACCTGGACGCT...ATTTCTTCTTGTTTCTTCTTCGCCCACGACCACTTCACAAACACCGACCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | ACTGACAATGACCTTATTGACAAGAAAGGGGCACACTTCTGGCGTCTGGGATTTCCATGGAGCTCTCTGTaGCCACACTTTATAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TDNDLIDKKGAHFWRLGFPWSSL*PHFIST Trigger: GGTACTTATAAAGTGTGGCCACAGAGAGCTCCATGG...AAATCCCAGACGCCAGAAGTGTGCCCCTTTCTTGTCAATAAGGTCATTGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | TTACCAAGGCAGGCAGCATGTCTTCAAGGTCACCGTTaGATCACTCCCTTGAAACTATGCAGATCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQAACLQGHR*ITPLKLCRSRI Trigger: GATTCTGGATCTGCATAGTTTCAAGGGAGTGATCAAACGGTGACCTTGAAGACATGCTGCCTGCCTTGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | AATGTGAACAAGTTTTTGATCCTCCTGGGTTTATCCTaGGAAGGACTAACTGCAGGGGCGTGTGAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NVNKFLILLGLS*EGLTAGACEEL Trigger: CAGTTCCTCACACGCCCCTGCAGTTAGTCCTTCCAAGGATAAACCCAGGAGGATCAAAAACTTGTTCACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGCAGCAGCAGCACAGGAAACCTGTTACAAATTCATGAACTTCATTCTAGTGTTTCTTCCAGGTTaGTCAAGGAACCTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAAAAAQETCYKFMNFILVFLPG*SRNLRG Trigger: ACCCCTTAGGTTCCTTGAGCAACCTGGAAGAAACAC...TAGAATGAAGTTCATGAATTTGTAACAGGTTTCCTGTGCTGCTGCTGCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | CCAGCGTCACCTATTTCTTTTGTCTGTTGTACCTGTTaGCCTCAAAGAGGCAATTCGTCTCAGATGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PASPISFVCCTC*PQRGNSSQMVI Trigger: AATCACCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAATAGGTGACGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | AGAAGACGGAGACAATGCCAGCGTCACCTATTTCTTTaGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRRRQCQRHLFL*SVVPVCLKEAI Trigger: AATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAATAGGTGACGCTGGCATTGTCTCCGTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGAAGGAACCTAAGGGGTaGTATTCGGTGAGAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLSVVPVCLKEAIRLRWKEPKG*YSVRIV Trigger: CACTATTCTCACCGAATATCACCCCTTAGGTTCCTT...CCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| 3UTR CAA 72 bp | GTGCCACCAGTGTTAACGGATAATGTGAACAAGTTTTaGATCCTCCTGGGTTTATCCTTGGAAGGACTAACT | + |
|
Preference number: 4 (lower is better) Translates to: VPPVLTDNVNKF*ILLGLSLEGLT Trigger: AGTTAGTCCTTCCAAGGATAAACCCAGGAGGATCAAAAACTTGTTCACATTATCCGTTAACACTGGTGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | AGACAAGAGGCACCTTATGAGAGACCATTAATACATGTCAGATTTCTCATGTCTCTTGTTAGCAGGTACTaGGACAATGTTTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQEAPYERPLIHVRFLMSLVSRY*DNVLGR Trigger: CCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAG...AGACATGAGAAATCTGACATGTATTAATGGTCTCTCATAAGGTGCCTCTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAAGCACCATTCAAGGCAGGTAAGAAAGTTCCTTCAACTTGCTGTTCCAGAAACTGGAGACATCTaGAATCTTCCAGATGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKHHSRQVRKFLQLAVPETGDI*NLPDVN Trigger: GTTGACATCTGGAAGATTCCAGATGTCTCCAGTTTC...TGGAACAGCAAGTTGAAGGAACTTTCTTACCTGCCTTGAATGGTGCTTTGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | ATCTCTAGACAGCCACAATCTCAAGAGCATGCTATCTTGGTGCACTTTGGTTTCCTCTTGCACGCCTTATaGATATCAAACAAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISRQPQSQEHAILVHFGFLLHAL*ISNKWN Trigger: ATTCCATTTGTTTGATATCCATAAGGCGTGCAAGAG...GAAACCAAAGTGCACCAAGATAGCATGCTCTTGAGATTGTGGCTGTCTAGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAAGCACCATTCAAGGCAGGTAAGAAAGTTCCTTCAACTTGCTGTTCCACAAGTGTTCACGTCTTaGTACTTTGAAAGGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKHHSRQVRKFLQLAVPQVFTS*YFERFS Trigger: ACTAAACCTTTCAAAGTACCAAGACGTGAACACTTG...TGGAACAGCAAGTTGAAGGAACTTTCTTACCTGCCTTGAATGGTGCTTTGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS GCA 90 bp | GACAGAAAGACTCTCTTCACGGCTCCCTCCCCAACGCGCTTCAGCTaGCTGACTTCTGTCCTCAGCTCTTCACAGGACAGCCAGCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DRKTLFTAPSPTRFS*LTSVLSSSQDSQRE Trigger: CTCACGCTGGCTGTCCTGTGAAGAGCTGAGGACAGAAGTCAGGCAGCTGAAGCGCGTTGGGGAGGGAGCCGTGAAGAGAGTCTTTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS GCA 90 bp | CCCACCAGCGTGACCACGTGCTCACTCTGTAGAGACTTCAGCATCTaGAGCCCATGCAGGAAGTCCTCCTTCATCTCCAGCCTGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTSVTTCSLCRDFSI*SPCRKSSFISSLVS Trigger: GCTCACCAGGCTGGAGATGAAGGAGGACTTCCTGCATGGGCTGCAGATGCTGAAGTCTCTACAGAGTGAGCACGTGGTCACGCTGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS TCA 90 bp | CAGCTGCCTGACTTCTGTCCTCAGCTCTTCACAGGACAGCCAGCGTaGGCAGTTTCTCATCCGCCCCATTCTGAAGTAGCCCGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QLPDFCPQLFTGQPA*AVSHPPHSEVARRT Trigger: TGTCCTCCGGGCTACTTCAGAATGGGGCGGATGAGAAACTGCTCACGCTGGCTGTCCTGTGAAGAGCTGAGGACAGAAGTCAGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS GCA 90 bp | GTGACCACGTGCTCACTCTGTAGAGACTTCAGCATCTGCAGCCCATaGAGGAAGTCCTCCTTCATCTCCAGCCTGGTGAGCCGGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTTCSLCRDFSICSP*RKSSFISSLVSRER Trigger: TCTCTCCCGGCTCACCAGGCTGGAGATGAAGGAGGACTTCCTGCATGGGCTGCAGATGCTGAAGTCTCTACAGAGTGAGCACGTGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS TCA 90 bp | GCATCTGCAGCCCATGCAGGAAGTCCTCCTTCATCTCCAGCCTGGTaGGCCGGGAGAGAGCGACTTTGTGTTCCTTCCATTCAGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASAAHAGSPPSSPAW*AGRERLCVPSIQTE Trigger: TTCTGTCTGAATGGAAGGAACACAAAGTCGCTCTCTCCCGGCTCACCAGGCTGGAGATGAAGGAGGACTTCCTGCATGGGCTGCAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | ATCGTCTTGGAAGGGCGTGTCTTCTCCGTAGGGCCACAGCTGCTCTaGAGCCACAAAATCCCCATGGAGCTCTCTGTGGCCACACTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: IVLEGRVFSVGPQLL*SHKIPMELSVATLY Trigger: ATAAAGTGTGGCCACAGAGAGCTCCATGGGGATTTTGTGGCTCCAGAGCAGCTGTGGCCCTACGGAGAAGACACGCCCTTCCAAGACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS TCA 90 bp | CATGGTCTACCAGGGGCAGAGCGTCCAGGTCGTTTGCCACAATGCTaGAGTTACTTGTTAGCAGGTACTGGGACAATGTTTTGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGLPGAERPGRLPQC*SYLLAGTGTMFWAG Trigger: ACCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAGCATTGTGGCAAACGACCTGGACGCTCTGCCCCTGGTAGACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | GTGAATGGAAAACCCTCTGGTAAGCGTCTAGCACGTTCTGAGCAGTaGGTCTTTCTGCCGGGATCTGGCTCTTGCACGCCTTATGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: VNGKPSGKRLARSEQ*VFLPGSGSCTPYGY Trigger: ATATCCATAAGGCGTGCAAGAGCCAGATCCCGGCAGAAAGACCCACTGCTCAGAACGTGCTAGACGCTTACCAGAGGGTTTTCCATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | TACTCCATGGCCAGCTGCAGCCTGTGCTGCCAAGTGTTCACGTCTTaGTACTTTGAAAGGTTTAGTGTTTCTTCCAGGTTGCTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSMASCSLCCQVFTS*YFERFSVSSRLLKE Trigger: TTCCTTGAGCAACCTGGAAGAAACACTAAACCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCTGGCCATGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | TCCAGGTCGTTTGCCACAATGCTGAAGTTACTTGTTAGCAGGTACTaGGACAATGTTTTGGGCAGGTCGTTAGAGTCACACATGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSFATMLKLLVSRY*DNVLGRSLESHMTL Trigger: GAGGGTCATGTGTGACTCTAACGACCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAGCATTGTGGCAAACGACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | CATATCACTCCCTTCCACGTGCCCCAAGAGGAAACTGGAGACATCTaGAATCTTCCAGATGTCAACCTTCTCATTGTAGGAAGGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HITPFHVPQEETGDI*NLPDVNLLIVGRHE Trigger: CTCATGCCTTCCTACAATGAGAAGGTTGACATCTGGAAGATTCCAGATGTCTCCAGTTTCCTCTTGGGGCACGTGGAAGGGAGTGATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
||
| CDS CCA 90 bp | TCTGCCGGGATCTGGCTCTTGCACGCCTTATGGATATCAAACAAATaGAATCTAACCATATCACTCCCTTCCACGTGCCCCAAGAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SAGIWLLHALWISNK*NLTISLPSTCPKRK Trigger: TTTCCTCTTGGGGCACGTGGAAGGGAGTGATATGGTTAGATTCCATTTGTTTGATATCCATAAGGCGTGCAAGAGCCAGATCCCGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 90 bp | TGGATATCAAACAAATGGAATCTAACCATATCACTCCCTTCCACGTaGCCCAAGAGGAAACTGGAGACATCTGGAATCTTCCAGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: WISNKWNLTISLPST*PKRKLETSGIFQMS Trigger: TGACATCTGGAAGATTCCAGATGTCTCCAGTTTCCTCTTGGGGCACGTGGAAGGGAGTGATATGGTTAGATTCCATTTGTTTGATATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS-3UTR CAA 90 bp | AGTTCAAAGCACCATTCAAGGCAGGTAAGAAAGTTCCTTCAACTTGCTGTTCCATACTGGGACAATGTTTaGGGCAGGTCGTTAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSKHHSRQVRKFLQLAVPYWDNV*GRSLES Trigger: TGACTCTAACGACCTGCCCAAAACATTGTCCCAGTA...TGGAACAGCAAGTTGAAGGAACTTTCTTACCTGCCTTGAATGGTGCTTTGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS-3UTR CAA 90 bp | TTTCTTTTGTCTGTTGTACCTGTTTGCCTCAAAGAGGCAATTCGTCTCAGATGGTCACGTCTTGGTACTTaGAAAGGTTTAGTGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLLSVVPVCLKEAIRLRWSRLGT*KGLVFL Trigger: AAGAAACACTAAACCTTTCAAAGTACCAAGACGTGA...CCATCTGAGACGAATTGCCTCTTTGAGGCAAACAGGTACAACAGACAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CCA 72 bp | GAAGGGCGTGTCTTCTCCGTAGGGCCACAGCTGCTCTaGAGCCACAAAATCCCCATGGAGCTCTCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: EGRVFSVGPQLL*SHKIPMELSVA Trigger: GGCCACAGAGAGCTCCATGGGGATTTTGTGGCTCCAGAGCAGCTGTGGCCCTACGGAGAAGACACGCCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS TCA 72 bp | GCCCATGCAGGAAGTCCTCCTTCATCTCCAGCCTGGTaGGCCGGGAGAGAGCGACTTTGTGTTCCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: AHAGSPPSSPAW*AGRERLCVPSI Trigger: AATGGAAGGAACACAAAGTCGCTCTCTCCCGGCTCACCAGGCTGGAGATGAAGGAGGACTTCCTGCATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CCA 72 bp | AAACCCTCTGGTAAGCGTCTAGCACGTTCTGAGCAGTaGGTCTTTCTGCCGGGATCTGGCTCTTGCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: KPSGKRLARSEQ*VFLPGSGSCTP Trigger: AGGCGTGCAAGAGCCAGATCCCGGCAGAAAGACCCACTGCTCAGAACGTGCTAGACGCTTACCAGAGGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 72 bp | TGCTCACTCTGTAGAGACTTCAGCATCTGCAGCCCATaGAGGAAGTCCTCCTTCATCTCCAGCCTGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSLCRDFSICSP*RKSSFISSLVS Trigger: GCTCACCAGGCTGGAGATGAAGGAGGACTTCCTGCATGGGCTGCAGATGCTGAAGTCTCTACAGAGTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 72 bp | GTGACCACGTGCTCACTCTGTAGAGACTTCAGCATCTaGAGCCCATGCAGGAAGTCCTCCTTCATCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VTTCSLCRDFSI*SPCRKSSFISS Trigger: GCTGGAGATGAAGGAGGACTTCCTGCATGGGCTGCAGATGCTGAAGTCTCTACAGAGTGAGCACGTGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 90 bp | AAGTCCTCCTTCATCTCCAGCCTGGTGAGCCGGGAGAGAGCGACTTaGTGTTCCTTCCATTCAGACAGAAAGACTCTCTTCACGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KSSFISSLVSRERAT*CSFHSDRKTLFTAP Trigger: GGGAGCCGTGAAGAGAGTCTTTCTGTCTGAATGGAAGGAACACAAAGTCGCTCTCTCCCGGCTCACCAGGCTGGAGATGAAGGAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 90 bp | CTTCCAGATGTCAACCTTCTCATTGTAGGAAGGCATGAGATCGTCTaGGAAGGGCGTGTCTTCTCCGTAGGGCCACAGCTGCTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LPDVNLLIVGRHEIV*EGRVFSVGPQLLWS Trigger: GCTCCAGAGCAGCTGTGGCCCTACGGAGAAGACACGCCCTTCCAAGACGATCTCATGCCTTCCTACAATGAGAAGGTTGACATCTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 72 bp | GTCAACCTTCTCATTGTAGGAAGGCATGAGATCGTCTaGGAAGGGCGTGTCTTCTCCGTAGGGCCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VNLLIVGRHEIV*EGRVFSVGPQL Trigger: CAGCTGTGGCCCTACGGAGAAGACACGCCCTTCCAAGACGATCTCATGCCTTCCTACAATGAGAAGGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 90 bp | GCCACAATGCTGAAGTTACTTGTTAGCAGGTACTGGGACAATGTTTaGGGCAGGTCGTTAGAGTCACACATGACCCTCGTGCCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ATMLKLLVSRYWDNV*GRSLESHMTLVPRG Trigger: CCCCCTGGGCACGAGGGTCATGTGTGACTCTAACGACCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAGCATTGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 72 bp | ATGATGCTGACGTACTCCATGGCCAGCTGCAGCCTGTaGTGCCAAGTGTTCACGTCTTGGTACTTTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: MMLTYSMASCSL*CQVFTSWYFER Trigger: CCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCTGGCCATGGAGTACGTCAGCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS TCA 72 bp | CCAGGGGCAGAGCGTCCAGGTCGTTTGCCACAATGCTaGAGTTACTTGTTAGCAGGTACTGGGACAATGTTT | + |
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Preference number: 6 (lower is better) Translates to: PGAERPGRLPQC*SYLLAGTGTMF Trigger: AAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAGCATTGTGGCAAACGACCTGGACGCTCTGCCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 72 bp | ATGCTGACGTACTCCATGGCCAGCTGCAGCCTGTGCTaGCAAGTGTTCACGTCTTGGTACTTTGAAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: MLTYSMASCSLC*QVFTSWYFERF Trigger: AAACCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCTGGCCATGGAGTACGTCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 72 bp | TTCATCTCCAGCCTGGTGAGCCGGGAGAGAGCGACTTaGTGTTCCTTCCATTCAGACAGAAAGACTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FISSLVSRERAT*CSFHSDRKTLF Trigger: GAAGAGAGTCTTTCTGTCTGAATGGAAGGAACACAAAGTCGCTCTCTCCCGGCTCACCAGGCTGGAGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 90 bp | TGGCCAGCTGCAGCCTGTGCTGCCAAGTGTTCACGTCTTGGTACTTaGAAAGGTTTAGTGTTTCTTCCAGGTTGCTCAAGGAACCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: WPAAACAAKCSRLGT*KGLVFLPGCSRNLR Trigger: CCTTAGGTTCCTTGAGCAACCTGGAAGAAACACTAAACCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCTGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS TCA 72 bp | TCTTCCAGATGTCAACCTTCTCATTGTAGGAAGGCATaGGATCGTCTTGGAAGGGCGTGTCTTCTCCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRCQPSHCRKA*DRLGRACLLRR Trigger: CCTACGGAGAAGACACGCCCTTCCAAGACGATCTCATGCCTTCCTACAATGAGAAGGTTGACATCTGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CCA 72 bp | GCCAGCTGCAGCCTGTGCTGCCAAGTGTTCACGTCTTaGTACTTTGAAAGGTTTAGTGTTTCTTCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASCSLCCQVFTS*YFERFSVSSRL Trigger: CAACCTGGAAGAAACACTAAACCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGCAGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 72 bp | GCAGCCTGTGCTGCCAAGTGTTCACGTCTTGGTACTTaGAAAGGTTTAGTGTTTCTTCCAGGTTGCTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: AACAAKCSRLGT*KGLVFLPGCSR Trigger: CCTTGAGCAACCTGGAAGAAACACTAAACCTTTCAAAGTACCAAGACGTGAACACTTGGCAGCACAGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CAA 72 bp | CTGAAGTTACTTGTTAGCAGGTACTGGGACAATGTTTaGGGCAGGTCGTTAGAGTCACACATGACCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: LKLLVSRYWDNV*GRSLESHMTLV Trigger: CACGAGGGTCATGTGTGACTCTAACGACCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS TCA 72 bp | AGTGTTTCTTCCAGGTTGCTCAAGGAACCTAAGGGGTaGTATTCGGTGAGAATAGTGCCATCTTCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SVSSRLLKEPKG*YSVRIVPSSSQ Trigger: CTGTGAGGAAGATGGCACTATTCTCACCGAATATCACCCCTTAGGTTCCTTGAGCAACCTGGAAGAAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS GCA 72 bp | AACAAATGGAATCTAACCATATCACTCCCTTCCACGTaGCCCAAGAGGAAACTGGAGACATCTGGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: NKWNLTISLPST*PKRKLETSGIF Trigger: GAAGATTCCAGATGTCTCCAGTTTCCTCTTGGGGCACGTGGAAGGGAGTGATATGGTTAGATTCCATTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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| CDS CCA 72 bp | TTTGCCACAATGCTGAAGTTACTTGTTAGCAGGTACTaGGACAATGTTTTGGGCAGGTCGTTAGAGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: FATMLKLLVSRY*DNVLGRSLESH Trigger: GTGTGACTCTAACGACCTGCCCAAAACATTGTCCCAGTACCTGCTAACAAGTAACTTCAGCATTGTGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061850.5 |
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