Pregenerated sensors for POMC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020660Ensembl transcript IDs: ENSMUST00000020990.7, ENSMUST00000218089.2, ENSMUST00000218169.2, ENSMUST00000219543.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACTGTGAAATCTaGAAGGTTTTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: LFTQFLLKIRADCEI*KVLFPNTGNSKRLE Trigger: CTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAAAACCTTTCAGATTTCACAGTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 |
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| CDS-3UTR GCA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACGCTGCCAGCACTGCTaGTGTTCCTGGGGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GHQLAHAGRGPWNEKTPARCQHC*CSWGRS Trigger: GCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCG...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACCGCTGCCAGCACTGCTaGTGTTCCTGGGGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHRCQHC*CSWGRS Trigger: GCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCG...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCCGCGCTGCCAGCACTaGTGCTGTTCCTGGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPPRCQH*CCSWGR Trigger: TCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGG...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTGCTGCTGTTCCTaGGGCCGAAGCGGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLHCCCS*GRSGPS Trigger: GCTGGGACCGCTTCGGCCCCAGGAACAGCAGCAGTG...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCAGACTCGGCTCTGGACTaGCATCTCCCCACACCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHQLAHAGRGPWNEKTPADSALD*HLPTPP Trigger: AGGCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTC...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCATGGAGTAGGAGCGCTTaGCCTCGCGTGGACTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: GHQLAHAGRGPWNEKTPAWSRSA*PRVDSA Trigger: AGCCGAGTCCACGCGAGGGCAAGCGCTCCTACTCCA...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTCTTGCCCACCGGCTTaGCCCAGCGGAAGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHSCPPA*PSGSAP Trigger: TGGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGA...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTCTTGCCCACCGGCTTaGCCCAGCGGAAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLSCPPA*PSGSAP Trigger: TGGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGA...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGGTGAGGTCCTGGCACTaGCTGCTCTCCAGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLVRSWH*LLSRHQ Trigger: CTGGTGCCTGGAGAGCAGCCAGTGCCAGGACCTCAC...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACGCGTGGACTCGGCTCTaGACTGCCATCTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHAWTRL*TAISPH Trigger: GTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGC...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCGACTCGGCTCTGGACTaGCATCTCCCCACACCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPDSALD*HLPTPP Trigger: AGGCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTC...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTTGGAGTAGGAGCGCTTaGCCTCGCGTGGACTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: RGHQLAHAGRGPWNEKTPWSRSA*PRVDSA Trigger: AGCCGAGTCCACGCGAGGGCAAGCGCTCCTACTCCA...AGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCTCTTGCCCACCGGCTTaGCCCAGCGGAAGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPSCPPA*PSGSAP Trigger: TGGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGA...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTCGGACTCCAGGACCTaGTCCAAGCCTAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHSDSRT*SKPNGR Trigger: GCGGCCATTAGGCTTGGAGCAGGTCCTGGAGTCCGA...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTGTCCTTGGGCGGGTTaGTCCAGCGGAAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHCPWAG*SSGSAP Trigger: TGGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACA...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTGTCCTTGGGCGGGTTaGTCCAGCGGAAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLCPWAG*SSGSAP Trigger: TGGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACA...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTGAGGTCCTGGCACTaGCTGCTCTCCAGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: RGHQLAHAGRGPWNEKTPVRSWH*LLSRHQ Trigger: CTGGTGCCTGGAGAGCAGCCAGTGCCAGGACCTCAC...AGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCGCGTGGACTCGGCTCTaGACTGCCATCTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPAWTRL*TAISPH Trigger: GTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGC...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGAGCGGAAGTGCTCCATaGAGTAGGAGCGCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLSGSAP*SRSACP Trigger: AGGGCAAGCGCTCCTACTCCATGGAGCACTTCCGCT...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACGTTCTCAGCAACGTTaGGGTACACCTTCACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GHQLAHAGRGPWNEKTPARSQQR*GTPSPG Trigger: GCCCGGTGAAGGTGTACCCCAACGTTGCTGAGAACG...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTCGTAACGCTTGTCCTTaGGCGGGTTGCTCCAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RGHQLAHAGRGPWNEKTPRNACP*AGCSSG Trigger: TCCGCTGGAGCAACCCGCCCAAGGACAAGCGTTACG...AGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR TCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGACATCTATGGAGGTCTaGAGCAGGAGGGCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLTSMEV*SRRASN Trigger: GTTGCTGGCCCTCCTGCTTCAGACCTCCATAGATGT...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACGTTTGCAAGCCCGGATaGAAGCCAGCAGGTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VISSPMQGGGLGMRRPLHVCKPG*KPAGCS Trigger: AGAGCAACCTGCTGGCTTGCATCCGGGCTTGCAAAC...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGGTTTGCAAGCCCGGATaGAAGCCAGCAGGTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLVCKPG*KPAGCS Trigger: AGAGCAACCTGCTGGCTTGCATCCGGGCTTGCAAAC...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTGGCCCTTCTTGTaGGCGTTCTTGATGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: EVISSPMQGGGLGMRRPLHWPFL*AFLMMA Trigger: CGCCATCATCAAGAACGCGCACAAGAAGGGCCAGTG...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCGTTCTCAGCAACGTTaGGGTACACCTTCACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPRSQQR*GTPSPG Trigger: GCCCGGTGAAGGTGTACCCCAACGTTGCTGAGAACG...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR TCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCACATCTATGGAGGTCTaGAGCAGGAGGGCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPTSMEV*SRRASN Trigger: GTTGCTGGCCCTCCTGCTTCAGACCTCCATAGATGT...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR TCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCAGCGGAAGTGACCCATaGCGTACTTCCGGGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPSGSDP*RTSGGF Trigger: AAAACCCCCGGAAGTACGTCATGGGTCACTTCCGCT...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCCGGGCGCCGTTTCTTaGCCACCGGCTTGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQPGAVS*PPACPS Trigger: GCTGGGGCAAGCCGGTGGGCAAGAAACGGCGCCCGG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR TCA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCTCTTCTCGGAGGTCATaGAGCCACCGTAACGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LEVISSPMQGGGLGMRRPSSRRS*SHRNAC Trigger: ACAAGCGTTACGGTGGCTTCATGACCTCCGAGAAGA...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCCGCGCTGCCAGCACTaGTGCTGTTCCTGGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQPRCQH*CCSWGR Trigger: TCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCACTGCTGCTGTTCCTaGGGCCGAAGCGGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQHCCCS*GRSGPS Trigger: GCTGGGACCGCTTCGGCCCCAGGAACAGCAGCAGTG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGTCCGTGGTGAGGTCCTaGCACTGGCTGCTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQSVVRS*HWLLSR Trigger: CCTGGAGAGCAGCCAGTGCCAGGACCTCACCACGGA...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGGCGTGGACTCGGCTCTaGACTGCCATCTCCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQAWTRL*TAISPH Trigger: GTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGC...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGTGTCCTTGGGCGGGTTaGTCCAGCGGAAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQCPWAG*SSGSAP Trigger: TGGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACA...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCACTGCTGCTGTTCCTaGGGCCGAAGCGGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMHCCCS*GRSGPS Trigger: GCTGGGACCGCTTCGGCCCCAGGAACAGCAGCAGTG...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCGTAACGCTTGTCCTTaGGCGGGTTGCTCCAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQRNACP*AGCSSG Trigger: TCCGCTGGAGCAACCCGCCCAAGGACAAGCGTTACG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR TCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCGGTCCCAGCGGAAGTaGCCCATGACGTACTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMRSQRK*PMTYFR Trigger: CCGGAAGTACGTCATGGGTCACTTCCGCTGGGACCG...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR GCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGGACTCGGCTCTGGACTaGCATCTCCCCACACCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMDSALD*HLPTPP Trigger: AGGCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTC...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGGTGAGGTCCTGGCACTaGCTGCTCTCCAGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMVRSWH*LLSRHQ Trigger: CTGGTGCCTGGAGAGCAGCCAGTGCCAGGACCTCAC...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS-3UTR CCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGTCCGTGGTGAGGTCCTaGCACTGGCTGCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMSVVRS*HWLLSR Trigger: CCTGGAGAGCAGCCAGTGCCAGGACCTCACCACGGA...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGTCGGACTCCAGGACCTaGTCCAAGCCTAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMSDSRT*SKPNGR Trigger: GCGGCCATTAGGCTTGGAGCAGGTCCTGGAGTCCGA...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCACTGGCCCTTCTTGTaGGCGTTCTTGATGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPNTGNSKRLEVISSPMQHWPFL*AFLMMA Trigger: CGCCATCATCAAGAACGCGCACAAGAAGGGCCAGTG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR GCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACCCGGGCGCCGTTTCTTaGCCACCGGCTTGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADPGAVS*PPACPS Trigger: GCTGGGGCAAGCCGGTGGGCAAGAAACGGCGCCCGG...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR GCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACCCGCGCTGCCAGCACTaGTGCTGTTCCTGGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADPRCQH*CCSWGR Trigger: TCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGG...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR TCA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGTCTTCTCGGAGGTCATaGAGCCACCGTAACGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPNTGNSKRLEVISSPMSSRRS*SHRNAC Trigger: ACAAGCGTTACGGTGGCTTCATGACCTCCGAGAAGA...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR GCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACCGCTGCCAGCACTGCTaGTGTTCCTGGGGCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADRCQHC*CSWGRS Trigger: GCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCG...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACTGTTCGGACTCCAGGACCTaGTCCAAGCCTAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVLTLFTQFLLKIRADCSDSRT*SKPNGR Trigger: GCGGCCATTAGGCTTGGAGCAGGTCCTGGAGTCCGA...ACAGTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR CCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACAGCGGAAGTGCTCCATaGAGTAGGAGCGCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADSGSAP*SRSACP Trigger: AGGGCAAGCGCTCCTACTCCATGGAGCACTTCCGCT...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR TCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACACATCTATGGAGGTCTaGAGCAGGAGGGCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADTSMEV*SRRASN Trigger: GTTGCTGGCCCTCCTGCTTCAGACCTCCATAGATGT...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR TCA 90 bp | GACAGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACAGCGGAAGTGACCCATaGCGTACTTCCGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSCVLTLFTQFLLKIRADSGSDP*RTSGGF Trigger: AAAACCCCCGGAAGTACGTCATGGGTCACTTCCGCT...GTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS GCA 90 bp | TCTGGACTGCCATCTCCCCACACCGCCTCTTCCTCCGCACGCCTCTaGGCCGCGCTGCCAGCACTGCTGCTGTTCCTGGGGCCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLPSPHTASSSARL*AALPALLLFLGPKR Trigger: CCGCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGGCGCAGAGGCGTGCGGAGGAAGAGGCGGTGTGGGGAGATGGCAGTCCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 90 bp | CCATGGAGTAGGAGCGCTTGCCCTCGCGTGGACTCGGCTCTGGACTaGCATCTCCCCACACCGCCTCTTCCTCCGCACGCCTCTGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PWSRSACPRVDSALD*HLPTPPLPPHASAP Trigger: CGGCGCAGAGGCGTGCGGAGGAAGAGGCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGCGAGGGCAAGCGCTCCTACTCCATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTTCTTGCCCACCGGCTaGCCCCAGCGGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVISSPMQGGGLGMRRPLFLPTG*PQRKCS Trigger: GGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGAA...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCTTCTTGCCCACCGGCTaGCCCCAGCGGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEVISSPMQGGGLGMRRPFLPTG*PQRKCS Trigger: GGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGAA...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACTTGTCCTTGGGCGGGTaGCTCCAGCGGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VISSPMQGGGLGMRRPLHLSLGG*LQRKCS Trigger: GGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACAA...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTTGTCCTTGGGCGGGTaGCTCCAGCGGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVISSPMQGGGLGMRRPLLSLGG*LQRKCS Trigger: GGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACAA...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGAGCGAGAGGTCGAGTTaGCAAGCCCGGATGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVISSPMQGGGLGMRRPLSERSS*QARMQA Trigger: GGCTTGCATCCGGGCTTGCAAACTCGACCTCTCGCT...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS TCA 90 bp | GGACCTGCTCCAAGCCTAATGGCCGCTCGCCTTCCAGCTCCCTCTTaGACTCTAGGGGAAAGGCCTCCGCCGACTCGTTCTCAGCAACGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAPSLMAARLPAPS*TLGERPPPTRSQQR Trigger: ACGTTGCTGAGAACGAGTCGGCGGAGGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGGCGAGCGGCCATTAGGCTTGGAGCAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCACCCTTCCAGCTCCCTCTaGAACTCTAGGGGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VISSPMQGGGLGMRRPLHPSSSL*NSRGKA Trigger: GGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGG...GTGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTCCTTCCAGCTCCCTCTaGAACTCTAGGGGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGHQLAHAGRGPWNEKTPPSSSL*NSRGKA Trigger: GGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGG...AGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGTTGATGATGGCGTTCTaGAAGAGCGTCACCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVISSPMQGGGLGMRRPLLMMAF*KSVTRG Trigger: GCCCCTGGTGACGCTCTTCAAGAACGCCATCATCAA...CAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCATTGATGATGGCGTTCTaGAAGAGCGTCACCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHQLAHAGRGPWNEKTPALMMAF*KSVTRG Trigger: GCCCCTGGTGACGCTCTTCAAGAACGCCATCATCAA...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTTTGATGATGGCGTTCTaGAAGAGCGTCACCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGHQLAHAGRGPWNEKTPLMMAF*KSVTRG Trigger: GCCCCTGGTGACGCTCTTCAAGAACGCCATCATCAA...AGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCCTGCATTCTTGTGCGCGTTCTaGATGATGGCGTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHQLAHAGRGPWNEKTPAFLCAF*MMAFLK Trigger: CTTCAAGAACGCCATCATCAAGAACGCGCACAAGAA...TGCAGGGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGTCATCAGCTCGCCCATGCAGGGAGGGGGCCTTGGAATGAGAAGACCCTTCTTGTGCGCGTTCTaGATGATGGCGTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEVISSPMQGGGLGMRRPFLCAF*MMAFLK Trigger: CTTCAAGAACGCCATCATCAAGAACGCGCACAAGAA...GGGTCTTCTCATTCCAAGGCCCCCTCCCTGCATGGGCGAGCTGATGACCTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGCAGCCTTCCAGCTCCCTCTaGAACTCTAGGGGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPNTGNSKRLEVISSPMQPSSSL*NSRGKA Trigger: GGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGG...CTGCATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGTTGTCCTTGGGCGGGTaGCTCCAGCGGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPNTGNSKRLEVISSPMLSLGG*LQRKCS Trigger: GGAGCACTTCCGCTGGAGCAACCCGCCCAAGGACAA...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGAGCGAGAGGTCGAGTTaGCAAGCCCGGATGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPNTGNSKRLEVISSPMSERSS*QARMQA Trigger: GGCTTGCATCCGGGCTTGCAAACTCGACCTCTCGCT...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGTGTTTTGACTTTATTTACGCAGTTTTTATTGAAGATCAGAGCCGACTGTACCGGGCGCCGTTTCTaGCCCACCGGCTTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCVLTLFTQFLLKIRADCTGRRF*PTGLPQ Trigger: CTGGGGCAAGCCGGTGGGCAAGAAACGGCGCCCGGT...ACAGTCGGCTCTGATCTTCAATAAAAACTGCGTAAATAAAGTCAAAACACAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020990.7 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCTAACACAGGTAACTCTAAGAGGCTAGAGGTCATCAGCTCGCCCATGTTCTTGTGCGCGTTCTaGATGATGGCGTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPNTGNSKRLEVISSPMFLCAF*MMAFLK Trigger: CTTCAAGAACGCCATCATCAAGAACGCGCACAAGAA...CATGGGCGAGCTGATGACCTCTAGCCTCTTAGAGTTACCTGTGTTAGGAAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | CCTCCGCACGCCTCTGCGCCGCGCTGCCAGCACTGCTaGTGTTCCTGGGGCCGAAGCGGTCCCAGCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PPHASAPRCQHC*CSWGRSGPSGS Trigger: ACTTCCGCTGGGACCGCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGGCGCAGAGGCGTGCGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | CTTCCTCCGCACGCCTCTGCGCCGCGCTGCCAGCACTaGTGCTGTTCCTGGGGCCGAAGCGGTCCCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPHASAPRCQH*CCSWGRSGPSG Trigger: TCCGCTGGGACCGCTTCGGCCCCAGGAACAGCAGCAGTGCTGGCAGCGCGGCGCAGAGGCGTGCGGAGGAAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | CCATCTCCCCACACCGCCTCTTCCTCCGCACGCCTCTaGGCCGCGCTGCCAGCACTGCTGCTGTTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPHTASSSARL*AALPALLLFLG Trigger: CCCCAGGAACAGCAGCAGTGCTGGCAGCGCGGCGCAGAGGCGTGCGGAGGAAGAGGCGGTGTGGGGAGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | AGGAGCGCTTGCCCTCGCGTGGACTCGGCTCTGGACTaGCATCTCCCCACACCGCCTCTTCCTCCGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSACPRVDSALD*HLPTPPLPPHA Trigger: GGCGTGCGGAGGAAGAGGCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGCGAGGGCAAGCGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | GGCCCGTCGTCCTTCTCCGCGTCGGACTCCAGGACCTaGTCCAAGCCTAATGGCCGCTCGCCTTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSSFSASDSRT*SKPNGRSPSSS Trigger: GGAGCTGGAAGGCGAGCGGCCATTAGGCTTGGAGCAGGTCCTGGAGTCCGACGCGGAGAAGGACGACGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | CAACGTTGGGGTACACCTTCACCGGGCGCCGTTTCTTaGCCACCGGCTTGCCCCAGCGGAAGTGCTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: QRWGTPSPGAVS*PPACPSGSAPW Trigger: CCATGGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGAAACGGCGCCCGGTGAAGGTGTACCCCAACGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS CCA 72 bp | GAAGTGCTCCATGGAGTAGGAGCGCTTGCCCTCGCGTaGACTCGGCTCTGGACTGCCATCTCCCCACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: EVLHGVGALALA*TRLWTAISPHR Trigger: GCGGTGTGGGGAGATGGCAGTCCAGAGCCGAGTCCACGCGAGGGCAAGCGCTCCTACTCCATGGAGCACTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS CAA 72 bp | GCAACGTTGGGGTACACCTTCACCGGGCGCCGTTTCTaGCCCACCGGCTTGCCCCAGCGGAAGTGCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ATLGYTFTGRRF*PTGLPQRKCSM Trigger: CATGGAGCACTTCCGCTGGGGCAAGCCGGTGGGCAAGAAACGGCGCCCGGTGAAGGTGTACCCCAACGTTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS CCA 72 bp | GGGGAAAGGCCTCCGCCGACTCGTTCTCAGCAACGTTaGGGTACACCTTCACCGGGCGCCGTTTCTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GERPPPTRSQQR*GTPSPGAVSCP Trigger: TGGGCAAGAAACGGCGCCCGGTGAAGGTGTACCCCAACGTTGCTGAGAACGAGTCGGCGGAGGCCTTTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS CAA 72 bp | AGGGGAAAGGCCTCCGCCGACTCGTTCTCAGCAACGTaGGGGTACACCTTCACCGGGCGCCGTTTCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGKASADSFSAT*GYTFTGRRFLP Trigger: GGGCAAGAAACGGCGCCCGGTGAAGGTGTACCCCAACGTTGCTGAGAACGAGTCGGCGGAGGCCTTTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
||
| CDS GCA 72 bp | CAGGAAACACGGGCGTCTCCAGCGAGAGGTCGAGTTTaGAAGCCCGGATGCAAGCCAGCAGGTTGCTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: QETRASPARGRV*KPGCKPAGCSP Trigger: CGGAGAGCAACCTGCTGGCTTGCATCCGGGCTTGCAAACTCGACCTCTCGCTGGAGACGCCCGTGTTTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000218169.2 ENSMUST00000219543.2 |
||
| CDS CCA 72 bp | GCCAGCAGGTTGCTCTCCGTGGTGAGGTCCTGGCACTaGCTGCTCTCCAGGCACCAGCTCCACACATCTATG | + |
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Preference number: 6 (lower is better) Translates to: ASRLLSVVRSWH*LLSRHQLHTSM Trigger: CATAGATGTGTGGAGCTGGTGCCTGGAGAGCAGCCAGTGCCAGGACCTCACCACGGAGAGCAACCTGCTGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000218169.2 ENSMUST00000219543.2 |
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| CDS CAA 72 bp | AGGTCGAGTTTGCAAGCCCGGATGCAAGCCAGCAGGTaGCTCTCCGTGGTGAGGTCCTGGCACTGGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSSLQARMQASR*LSVVRSWHWLL Trigger: GAGCAGCCAGTGCCAGGACCTCACCACGGAGAGCAACCTGCTGGCTTGCATCCGGGCTTGCAAACTCGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000218169.2 ENSMUST00000219543.2 |
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| CDS CAA 72 bp | CCAGGAAACACGGGCGTCTCCAGCGAGAGGTCGAGTTaGCAAGCCCGGATGCAAGCCAGCAGGTTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGNTGVSSERSS*QARMQASRLLS Trigger: GGAGAGCAACCTGCTGGCTTGCATCCGGGCTTGCAAACTCGACCTCTCGCTGGAGACGCCCGTGTTTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000218169.2 ENSMUST00000219543.2 |
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| CDS CAA 90 bp | TTGAACTCTAGGGGAAAGGCCTCCGCCGACTCGTTCTCAGCAACGTaGGGGTACACCTTCACCGGGCGCCGTTTCTTGCCCACCGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LNSRGKASADSFSAT*GYTFTGRRFLPTGL Trigger: CAAGCCGGTGGGCAAGAAACGGCGCCCGGTGAAGGTGTACCCCAACGTTGCTGAGAACGAGTCGGCGGAGGCCTTTCCCCTAGAGTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS CAA 90 bp | AGGACCTGCTCCAAGCCTAATGGCCGCTCGCCTTCCAGCTCCCTCTaGAACTCTAGGGGAAAGGCCTCCGCCGACTCGTTCTCAGCAACG | + |
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Preference number: 6 (lower is better) Translates to: RTCSKPNGRSPSSSL*NSRGKASADSFSAT Trigger: CGTTGCTGAGAACGAGTCGGCGGAGGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGGCGAGCGGCCATTAGGCTTGGAGCAGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS CAA 72 bp | TCCAAGCCTAATGGCCGCTCGCCTTCCAGCTCCCTCTaGAACTCTAGGGGAAAGGCCTCCGCCGACTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKPNGRSPSSSL*NSRGKASADSF Trigger: GAACGAGTCGGCGGAGGCCTTTCCCCTAGAGTTCAAGAGGGAGCTGGAAGGCGAGCGGCCATTAGGCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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| CDS CAA 72 bp | TGGCCCTTCTTGTGCGCGTTCTTGATGATGGCGTTCTaGAAGAGCGTCACCAGGGGCGTCTGGCTCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: WPFLCAFLMMAF*KSVTRGVWLFS Trigger: CGAGAAGAGCCAGACGCCCCTGGTGACGCTCTTCAAGAACGCCATCATCAAGAACGCGCACAAGAAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020990.7 ENSMUST00000218089.2 ENSMUST00000219543.2 |
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