Pregenerated sensors for POM121L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016982Ensembl transcript IDs: ENSMUST00000017126.6, ENSMUST00000117882.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | TCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTACTGCCCTTCCTGCACTaGAGGAGGGCCCTCAGCACC | + |
Preference number: 4 (lower is better) Translates to: SSRDSKKWSLLRSQILVVLPFLH*RRALST Trigger: GGTGCTGAGGGCCCTCCTCCAGTGCAGGAAGGGCAG...TACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR GCA 90 bp | TCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTATGGCTCTGCCCTTCCTaGACTGGAGGAGGGCCCTCA | + |
Preference number: 4 (lower is better) Translates to: SRDSKKWSLLRSQILVVLWLCPS*TGGGPS Trigger: TGAGGGCCCTCCTCCAGTGCAGGAAGGGCAGAGCCA...TAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | TCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATCTGTGGCCTCTTCATaGGGAAGCGCCTCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: SSRDSKKWSLLRSQILVVSVASS*GSASRP Trigger: AGGCCTGGAGGCGCTTCCCCATGAAGAGGCCACAGA...TACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | GGCTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCGTGGCTCTTCCCACCTaGCTCTGCCCTTCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: GSFYSSSRDSKKWSLLRSVALPT*LCPSCT Trigger: AGTGCAGGAAGGGCAGAGCCAGGTGGGAAGAGCCAC...GGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | CTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAAGGTGTCCGGGAACAGTaGCTCTTCCCACCTGGCTCT | + |
Preference number: 4 (lower is better) Translates to: LFIHHPGIPKSGLCSAPKGVREQ*LFPPGS Trigger: AGAGCCAGGTGGGAAGAGCCACTGTTCCCGGACACC...TTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | TCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATCCAGCCCTCATCTCTaGAATGGAGTCTCCGGCTGT | + |
Preference number: 4 (lower is better) Translates to: SSRDSKKWSLLRSQILVVSSPHL*NGVSGC Trigger: ACAGCCGGAGACTCCATTCCAGAGATGAGGGCTGGA...TACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | CAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTAGATTGGGTCCTCTTCAGTaGCAACAGGACCTTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: QGFQKVVSAPLPNSGSIRLGPLQ*QQDLAG Trigger: GCCAGCAAGGTCCTGTTGTCACTGAAGAGGACCCAA...TCTAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | TTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGCCAGGTGGAATCAGTaGCTGGTGTTGTGGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: LFIIQGFQKVVSAPLPNSARWNQ*LVLWES Trigger: GCTCTCCCACAACACCAGTCACTGATTCCACCTGGC...AGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | TCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTATCAGAGACCCAGGCCTaGCCACAAACGAAACAGTGG | + |
Preference number: 4 (lower is better) Translates to: SRDSKKWSLLRSQILVVLSETQA*PQTKQW Trigger: CCACTGTTTCGTTTGTGGCCAGGCCTGGGTCTCTGA...TAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | GGCTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCGGTGTGACTGAGAGGTaGGAATTAGGACTCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: GSFYSSSRDSKKWSLLRSGVTER*ELGLSP Trigger: AGGAGAGAGTCCTAATTCTCACCTCTCAGTCACACC...GGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | CTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAGGTGGAATCAGTGACTaGTGTTGTGGGAGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: LFLFIIQGFQKVVSAPLPGGISD*CCGRAW Trigger: CCAAGCTCTCCCACAACACCAGTCACTGATTCCACC...TGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | GGCTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCTCAAGACATCTTTCTTaGCCTCTGAGGTCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: GSFYSSSRDSKKWSLLRSSRHLS*PLRSSS Trigger: GGAGCTGGACCTCAGAGGCCAAGAAAGATGTCTTGA...GGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | AAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTAGACTTGTCCACCTATAGAGACAAGGTAGGCTaGATTCCAGCCCTCATCTCT | + |
Preference number: 4 (lower is better) Translates to: KWSLLRSQILVVLDLSTYRDKVG*IPALIS Trigger: AGAGATGAGGGCTGGAATTCAGCCTACCTTGTCTCT...ATAGGTGGACAAGTCTAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | TCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATCTCTTCCAAGATCCTaGGAGCTCTCTAGAAGAACT | + |
Preference number: 4 (lower is better) Translates to: SSRDSKKWSLLRSQILVVSLPRS*ELSRRT Trigger: AGTTCTTCTAGAGAGCTCTCAGGATCTTGGAAGAGA...TACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | TTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATATCTTTCTTGGCCTCTaGGGTCCAGCTCCATCTTCC | + |
Preference number: 4 (lower is better) Translates to: FLFIIQGFQKVVSAPLPNIFLGL*GPAPSS Trigger: GGAAGATGGAGCTGGACCTCAGAGGCCAAGAAAGAT...ATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | CCAAATTCTGGTAGTATTAGACTTGTCCACCTATTCAAGATAACACATGAAAGGAAGGAAGAGAGCCCATaGTGGGGTTCTGTGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: PNSGSIRLVHLFKITHERKEESP*WGSVAS Trigger: AGAGGCCACAGAACCCCATCATGGGCTCTCTTCCTT...CCTTTCATGTGTTATCTTGAATAGGTGGACAAGTCTAATACTACCAGAATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR TCA 90 bp | AAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTAGACTTGTCCACCTATTCTGGACTAATGTCCTaGGAAAATGTCTCTTCCAAG | + |
Preference number: 4 (lower is better) Translates to: KWSLLRSQILVVLDLSTYSGLMS*ENVSSK Trigger: CTTGGAAGAGACATTTTCTCAGGACATTAGTCCAGA...ATAGGTGGACAAGTCTAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | CTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTATCATCTGAGCTCTaGACATGGGGTCTCCTTTTC | + |
Preference number: 4 (lower is better) Translates to: LFIHHPGIPKSGLCSAPKLSSEL*TWGLLF Trigger: GAAAAGGAGACCCCATGTCCAGAGCTCAGATGATAA...TTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | TTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTTCTGAAGAGATGCCTTaGATGTGCTCTAACTGTGAG | + |
Preference number: 4 (lower is better) Translates to: LFIIQGFQKVVSAPLPNSSEEMP*MCSNCE Trigger: CTCACAGTTAGAGCACATCCAAGGCATCTCTTCAGA...AGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS-3UTR CCA 90 bp | CTCCCAAATTCTGGTAGTATTAGACTTGTCCACCTATTCAAGATAACACATGAATTGGAGACGCCTGGGTaGAAGCAATTGAGGGATTTG | + |
Preference number: 4 (lower is better) Translates to: LPNSGSIRLVHLFKITHELETPG*KQLRDL Trigger: CAAATCCCTCAATTGCTTCCACCCAGGCGTCTCCAA...TTCATGTGTTATCTTGAATAGGTGGACAAGTCTAATACTACCAGAATTTGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS GCA 90 bp | GGCTGTCGGAGGTGTCCGGGAACAGTGGCTCTTCCCACCTGGCTCTaGCCTTCCTGCACTGGAGGAGGGCCCTCAGCACCGGGTCCTTTC | + |
Preference number: 5 (lower is better) Translates to: GCRRCPGTVALPTWL*PSCTGGGPSAPGPF Trigger: GAAAGGACCCGGTGCTGAGGGCCCTCCTCCAGTGCAGGAAGGGCAGAGCCAGGTGGGAAGAGCCACTGTTCCCGGACACCTCCGACAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CCA 90 bp | TCCGGGAACAGTGGCTCTTCCCACCTGGCTCTGCCCTTCCTGCACTaGAGGAGGGCCCTCAGCACCGGGTCCTTTCCACAGGGCCCTGGT | + |
Preference number: 5 (lower is better) Translates to: SGNSGSSHLALPFLH*RRALSTGSFPQGPG Trigger: ACCAGGGCCCTGTGGAAAGGACCCGGTGCTGAGGGCCCTCCTCCAGTGCAGGAAGGGCAGAGCCAGGTGGGAAGAGCCACTGTTCCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS-3UTR CAA 90 bp | GATTCCAAAAAGTGGTCTCTGCTCCGCTCCCAAATTCTGGTAGTATTAGACTTGTTGGCGGGATCCCAGTaGGGCGGCCTCCGGGCCGGC | + |
Preference number: 5 (lower is better) Translates to: DSKKWSLLRSQILVVLDLLAGSQ*GGLRAG Trigger: GCCGGCCCGGAGGCCGCCCAACTGGGATCCCGCCAA...CAAGTCTAATACTACCAGAATTTGGGAGCGGAGCAGAGACCACTTTTTGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS TCA 90 bp | TACGCTTCAGGTAACTTTCCCACCAGTCTGAAGGAAGAGAGCCCATaGTGGGGTTCTGTGGCCTCTTCATGGGGAAGCGCCTCCAGGCCT | + |
Preference number: 5 (lower is better) Translates to: YASGNFPTSLKEESP*WGSVASSWGSASRP Trigger: AGGCCTGGAGGCGCTTCCCCATGAAGAGGCCACAGAACCCCATCATGGGCTCTCTTCCTTCAGACTGGTGGGAAAGTTACCTGAAGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 90 bp | CAGACCTGTGAGCCCGAGGGATTGAAGATAGCCAGGTGGAATCAGTaGCTGGTGTTGTGGGAGAGCTTGGAGACGCCTGGGTGGAAGCAA | + |
Preference number: 5 (lower is better) Translates to: QTCEPEGLKIARWNQ*LVLWESLETPGWKQ Trigger: TTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAACACCAGTCACTGATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACAGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | GCTGTGGGGTTAATGACAGATGAGTGTGGGGGCACAGCAGACCTGTaGGCCCGAGGGATTGAAGATAGCCAGGTGGAATCAGTGACTGGT | + |
Preference number: 5 (lower is better) Translates to: AVGLMTDECGGTADL*ARGIEDSQVESVTG Trigger: ACCAGTCACTGATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACAGGTCTGCTGTGCCCCCACACTCATCTGTCATTAACCCCACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | TTTCCCTGTGAGCCCGAGGGATTGAAGATAGCCAGGTGGAATCAGTaGCTGGTGTTGTGGGAGAGCTTGGAGACGCCTGGGTGGAAGCAA | + |
Preference number: 5 (lower is better) Translates to: FPCEPEGLKIARWNQ*LVLWESLETPGWKQ Trigger: TTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAACACCAGTCACTGATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACAGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS GCA 90 bp | GAGACGCCTGGGTGGAAGCAATTGAGGGATTTGAGTCTGAAGAGATaGCTTGGATGTGCTCTAACTGTGAGCACCCGAGTGGGGCAGGCA | + |
Preference number: 5 (lower is better) Translates to: ETPGWKQLRDLSLKR*LGCALTVSTRVGQA Trigger: TGCCTGCCCCACTCGGGTGCTCACAGTTAGAGCACATCCAAGGCATCTCTTCAGACTCAAATCCCTCAATTGCTTCCACCCAGGCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 90 bp | CAGTGGCCGAGGGAAAGTTCTGGGAAGCTCCAAGCAGGAAAGTGCTaGAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTGCTGGTCACTA | + |
Preference number: 5 (lower is better) Translates to: QWPRESSGKLQAGKC*KKGQSKSCLWCWSL Trigger: TAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | GACGTAACCACACAGGGGGCTGTGGTGGCTAGGCTGTGGAAAAGATaGGTAGAATCAGAACTCAGTGAAGAAGAGGGCTGCCTGGTGTGC | + |
Preference number: 5 (lower is better) Translates to: DVTTQGAVVARLWKR*VESELSEEEGCLVC Trigger: GCACACCAGGCAGCCCTCTTCTTCACTGAGTTCTGATTCTACCCATCTTTTCCACAGCCTAGCCACCACAGCCCCCTGTGTGGTTACGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | GCCTCTGAGGTCCAGCTCCATCTTCCAGACAGACACTTTTCCCTGTaGGCCCGAGGGATTGAAGATAGCCAGGTGGAATCAGTGACTGGT | + |
Preference number: 5 (lower is better) Translates to: ASEVQLHLPDRHFSL*ARGIEDSQVESVTG Trigger: ACCAGTCACTGATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACAGGGAAAAGTGTCTGTCTGGAAGATGGAGCTGGACCTCAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS GCA 90 bp | AATCAGTGGCCGAGGGAAAGTTCTGGGAAGCTCCAAGCAGGAAAGTaGTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTGCTGGTCA | + |
Preference number: 5 (lower is better) Translates to: NQWPRESSGKLQAGK*CKKGQSKSCLWCWS Trigger: TGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGGCCACTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 90 bp | GGCCCTGCATACTCTGGTTCCAGCATTGCACAAAGGGAGCTAGGGTaGTTGGGGTCATACTCTGTCTTGTGCCAGAAGTGCTCCTTTTGG | + |
Preference number: 5 (lower is better) Translates to: GPAYSGSSIAQRELG*LGSYSVLCQKCSFW Trigger: CCAAAAGGAGCACTTCTGGCACAAGACAGAGTATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTATGCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 90 bp | CTTGCAGGAATGCCAGCCAAAGGTGTGATCTGGTTAGGAGGGCCCTaGATACTCTGGTTCCAGCATTGCACAAAGGGAGCTAGGGTGCTT | + |
Preference number: 5 (lower is better) Translates to: LAGMPAKGVIWLGGP*ILWFQHCTKGARVL Trigger: AAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTATGCAGGGCCCTCCTAACCAGATCACACCTTTGGCTGGCATTCCTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | ATGCCAGCCAAAGGTGTGATCTGGTTAGGAGGGCCCTGCATACTCTaGTTCCAGCATTGCACAAAGGGAGCTAGGGTGCTTGGGGTCATA | + |
Preference number: 5 (lower is better) Translates to: MPAKGVIWLGGPCIL*FQHCTKGARVLGVI Trigger: TATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTATGCAGGGCCCTCCTAACCAGATCACACCTTTGGCTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | CAGGTGGAATCAGTGACTGGTGTTGTGGGAGAGCTTGGAGACGCCTaGGTGGAAGCAATTGAGGGATTTGAGTCTGAAGAGATGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: QVESVTGVVGELGDA*VEAIEGFESEEMPW Trigger: CCAAGGCATCTCTTCAGACTCAAATCCCTCAATTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAACACCAGTCACTGATTCCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CCA 90 bp | GTGAGTGCTGAAGTCACATTGGAGTTGCTTGAGGTCACTGGAGGCTaGTTTGTGGACGATAAGCCCAAAGTTGCCAGAGGGTTGCTCACC | + |
Preference number: 5 (lower is better) Translates to: VSAEVTLELLEVTGG*FVDDKPKVARGLLT Trigger: GGTGAGCAACCCTCTGGCAACTTTGGGCTTATCGTCCACAAACCAGCCTCCAGTGACCTCAAGCAACTCCAATGTGACTTCAGCACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS-3UTR CAA 90 bp | GGCTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCGGAGTTCACCACTCTaGAGACCGGGAACAAGGGCC | + |
Preference number: 5 (lower is better) Translates to: GSFYSSSRDSKKWSLLRSRSSPL*RPGTRA Trigger: GGCCCTTGTTCCCGGTCTCAAGAGTGGTGAACTCCG...GGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS TCA 90 bp | GAAGAGGGCTGCCTGGTGTGCACAGGAGCTGTCTCAGACATAGTTTaGAGCGGTTCTATACTGCCAAAGATAGGCTTGAAGGTGGGCCTT | + |
Preference number: 5 (lower is better) Translates to: EEGCLVCTGAVSDIV*SGSILPKIGLKVGL Trigger: AAGGCCCACCTTCAAGCCTATCTTTGGCAGTATAGAACCGCTTCAAACTATGTCTGAGACAGCTCCTGTGCACACCAGGCAGCCCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | GGGATGGTGGCAAAAGTGGCTTTGGGCTTGACCCCAAAGATGATGTaGGTGCTGAAGTCACATTGGAGTTGCTTGAGGTCACTGGAGGCT | + |
Preference number: 5 (lower is better) Translates to: GMVAKVALGLTPKMM*VLKSHWSCLRSLEA Trigger: AGCCTCCAGTGACCTCAAGCAACTCCAATGTGACTTCAGCACTCACATCATCTTTGGGGTCAAGCCCAAAGCCACTTTTGCCACCATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | AGAAGACGTCTCCACGGGAAGTACAGATGCAGGAAGATGGAGAATTaGGTTACTCACCACCCCAACCAAAGTGCTTTGTGTGGTGGGTGC | + |
Preference number: 5 (lower is better) Translates to: RRRLHGKYRCRKMEN*VTHHPNQSALCGGC Trigger: GCACCCACCACACAAAGCACTTTGGTTGGGGTGGTGAGTAACCCAATTCTCCATCTTCCTGCATCTGTACTTCCCGTGGAGACGTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | ACGAAGGGACCAAATATTACGCTTCAGGTAACTTTCCCACCAGTCTaGAGGAAGAGAGCCCATGATGGGGTTCTGTGGCCTCTTCATGGG | + |
Preference number: 5 (lower is better) Translates to: TKGPNITLQVTFPPV*RKRAHDGVLWPLHG Trigger: CCCATGAAGAGGCCACAGAACCCCATCATGGGCTCTCTTCCTTCAGACTGGTGGGAAAGTTACCTGAAGCGTAATATTTGGTCCCTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 90 bp | GCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTaGTGGTCACTATGTTCAAATCCACACCAGGGTCTTTGGATTTGC | + |
Preference number: 5 (lower is better) Translates to: AGKCCKKGQSKSCLW*WSLCSNPHQGLWIC Trigger: GCAAATCCAAAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 90 bp | AAGCTCCAAGCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTTaGCTGTGGTGCTGGTCACTATGTTCAAATCCACACCAGGGTCTT | + |
Preference number: 5 (lower is better) Translates to: KLQAGKCCKKGQSKS*LWCWSLCSNPHQGL Trigger: AAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | GGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTGCTaGTCACTATGTTCAAATCCACACCAGGGTCTTTGGATTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: GKCCKKGQSKSCLWC*SLCSNPHQGLWICW Trigger: CCAGCAAATCCAAAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | GGGTGTTGGGAAGGGAAAATTAAATCAGTGGCCGAGGGAAAGTTCTaGGAAGCTCCAAGCAGGAAAGTGCTGCAAGAAGGGACAGAGCAA | + |
Preference number: 5 (lower is better) Translates to: GCWEGKIKSVAEGKF*EAPSRKVLQEGTEQ Trigger: TTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGGCCACTGATTTAATTTTCCCTTCCCAACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 90 bp | ATGGGGTTGGAGACACACCTGAGTTCTCTGAAAGGAAAGAGGTACTaGAGCTTTGGGCAGGAGCTAGCTGGAGAGAAGATTGCTTTAGCC | + |
Preference number: 5 (lower is better) Translates to: MGLETHLSSLKGKRY*SFGQELAGEKIALA Trigger: GGCTAAAGCAATCTTCTCTCCAGCTAGCTCCTGCCCAAAGCTTCAGTACCTCTTTCCTTTCAGAGAACTCAGGTGTGTCTCCAACCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | CAAGCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTaGTGCTGGTCACTATGTTCAAATCCACACCAGGGTCTTTGGATT | + |
Preference number: 5 (lower is better) Translates to: QAGKCCKKGQSKSCL*CWSLCSNPHQGLWI Trigger: AATCCAAAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | GGAGACACACCTGAGTTCTCTGAAAGGAAAGAGGTACTGAAGCTTTaGGCAGGAGCTAGCTGGAGAGAAGATTGCTTTAGCCCATCTATG | + |
Preference number: 5 (lower is better) Translates to: GDTPEFSERKEVLKL*AGASWREDCFSPSM Trigger: CATAGATGGGCTAAAGCAATCTTCTCTCCAGCTAGCTCCTGCCCAAAGCTTCAGTACCTCTTTCCTTTCAGAGAACTCAGGTGTGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS-3UTR CAA 90 bp | CTCTTTTTATTCATCATCCAGGGATTCCAAAAAGTGGTCTCTGCTCCGCTCCCATGTGAGCCCGAGGGATaGAAGATAGCCAGGTGGAAT | + |
Preference number: 5 (lower is better) Translates to: LFLFIIQGFQKVVSAPLPCEPEG*KIARWN Trigger: ATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACA...TGGGAGCGGAGCAGAGACCACTTTTTGGAATCCCTGGATGATGAATAAAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS TCA 90 bp | TGGAGAGAAGATTGCTTTAGCCCATCTATGGCCCCAGGTGAGCTTTaGGAAGTATTTCTTTGGGATGGTGGCAAAAGTGGCTTTGGGCTT | + |
Preference number: 5 (lower is better) Translates to: WREDCFSPSMAPGEL*EVFLWDGGKSGFGL Trigger: AAGCCCAAAGCCACTTTTGCCACCATCCCAAAGAAATACTTCTCAAAGCTCACCTGGGGCCATAGATGGGCTAAAGCAATCTTCTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | TGGCTAAAGATAGTGACCGTGTGTACAGTGGGAATTGTGGGGTGTTaGGAAGGGAAAATTAAATCAGTGGCCGAGGGAAAGTTCTGGGAA | + |
Preference number: 5 (lower is better) Translates to: WLKIVTVCTVGIVGC*EGKIKSVAEGKFWE Trigger: TTCCCAGAACTTTCCCTCGGCCACTGATTTAATTTTCCCTTCCCAACACCCCACAATTCCCACTGTACACACGGTCACTATCTTTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 90 bp | TCAGTGCTTCTAAGAGGGGATATCTTGATGGCACTAGTAAGAACCTaGCTAAAGATAGTGACCGTGTGTACAGTGGGAATTGTGGGGTGT | + |
Preference number: 5 (lower is better) Translates to: SVLLRGDILMALVRT*LKIVTVCTVGIVGC Trigger: ACACCCCACAATTCCCACTGTACACACGGTCACTATCTTTAGCCAGGTTCTTACTAGTGCCATCAAGATATCCCCTCTTAGAAGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GGCGGCCTCCGGGCCGGCCTGTGTCTCCGAGCGGGCTaGGCGCGGTGGACATGCTGCACCCGGTGGACCTGG | + |
Preference number: 6 (lower is better) Translates to: GGLRAGLCLRAG*ARWTCCTRWTW Trigger: CCAGGTCCACCGGGTGCAGCATGTCCACCGCGCCCAGCCCGCTCGGAGACACAGGCCGGCCCGGAGGCCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CAA 72 bp | TCACTGACGAAAGCGGTAGGGTTGGCGGGATCCCAGTaGGGCGGCCTCCGGGCCGGCCTGTGTCTCCGAGCG | + |
Preference number: 6 (lower is better) Translates to: SLTKAVGLAGSQ*GGLRAGLCLRA Trigger: CGCTCGGAGACACAGGCCGGCCCGGAGGCCGCCCAACTGGGATCCCGCCAACCCTACCGCTTTCGTCAGTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CAA 90 bp | TTCATGGGGAAGCGCCTCCAGGCCTCACTGACGAAAGCGGTAGGGTaGGCGGGATCCCAGTTGGGCGGCCTCCGGGCCGGCCTGTGTCTC | + |
Preference number: 6 (lower is better) Translates to: FMGKRLQASLTKAVG*AGSQLGGLRAGLCL Trigger: GAGACACAGGCCGGCCCGGAGGCCGCCCAACTGGGATCCCGCCAACCCTACCGCTTTCGTCAGTGAGGCCTGGAGGCGCTTCCCCATGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 72 bp | AGGTGTCCGGGAACAGTGGCTCTTCCCACCTGGCTCTaGCCTTCCTGCACTGGAGGAGGGCCCTCAGCACCG | + |
Preference number: 6 (lower is better) Translates to: RCPGTVALPTWL*PSCTGGGPSAP Trigger: CGGTGCTGAGGGCCCTCCTCCAGTGCAGGAAGGGCAGAGCCAGGTGGGAAGAGCCACTGTTCCCGGACACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | GAGCCCGAGGGATTGAAGATAGCCAGGTGGAATCAGTaGCTGGTGTTGTGGGAGAGCTTGGAGACGCCTGGG | + |
Preference number: 6 (lower is better) Translates to: EPEGLKIARWNQ*LVLWESLETPG Trigger: CCCAGGCGTCTCCAAGCTCTCCCACAACACCAGTCACTGATTCCACCTGGCTATCTTCAATCCCTCGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | GGTAACTTTCCCACCAGTCTGAAGGAAGAGAGCCCATaGTGGGGTTCTGTGGCCTCTTCATGGGGAAGCGCC | + |
Preference number: 6 (lower is better) Translates to: GNFPTSLKEESP*WGSVASSWGSA Trigger: GGCGCTTCCCCATGAAGAGGCCACAGAACCCCATCATGGGCTCTCTTCCTTCAGACTGGTGGGAAAGTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 72 bp | CCGAGGGAAAGTTCTGGGAAGCTCCAAGCAGGAAAGTaGTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGG | + |
Preference number: 6 (lower is better) Translates to: PRESSGKLQAGK*CKKGQSKSCLW Trigger: CCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 72 bp | TGGTTAGGAGGGCCCTGCATACTCTGGTTCCAGCATTaGACAAAGGGAGCTAGGGTGCTTGGGGTCATACTC | + |
Preference number: 6 (lower is better) Translates to: WLGGPCILWFQH*TKGARVLGVIL Trigger: GAGTATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTATGCAGGGCCCTCCTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GAGAGACAAGGTAGGCTGAATTCCAGCCCTCATCTCTaGAATGGAGTCTCCGGCTGTCCCGGTTGTAGCTTC | + |
Preference number: 6 (lower is better) Translates to: ERQGRLNSSPHL*NGVSGCPGCSF Trigger: GAAGCTACAACCGGGACAGCCGGAGACTCCATTCCAGAGATGAGGGCTGGAATTCAGCCTACCTTGTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | CTCTCAGAAGACGACCGACTGAGAGACAAGGTAGGCTaGATTCCAGCCCTCATCTCTGGAATGGAGTCTCCG | + |
Preference number: 6 (lower is better) Translates to: LSEDDRLRDKVG*IPALISGMESP Trigger: CGGAGACTCCATTCCAGAGATGAGGGCTGGAATTCAGCCTACCTTGTCTCTCAGTCGGTCGTCTTCTGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CAA 72 bp | TCTGGTTCCAGCATTGCACAAAGGGAGCTAGGGTGCTaGGGGTCATACTCTGTCTTGTGCCAGAAGTGCTCC | + |
Preference number: 6 (lower is better) Translates to: SGSSIAQRELGC*GSYSVLCQKCS Trigger: GGAGCACTTCTGGCACAAGACAGAGTATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 72 bp | TTAATGACAGATGAGTGTGGGGGCACAGCAGACCTGTaGGCCCGAGGGATTGAAGATAGCCAGGTGGAATCA | + |
Preference number: 6 (lower is better) Translates to: LMTDECGGTADL*ARGIEDSQVES Trigger: TGATTCCACCTGGCTATCTTCAATCCCTCGGGCTCACAGGTCTGCTGTGCCCCCACACTCATCTGTCATTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 72 bp | TACTCTGGTTCCAGCATTGCACAAAGGGAGCTAGGGTaGTTGGGGTCATACTCTGTCTTGTGCCAGAAGTGC | + |
Preference number: 6 (lower is better) Translates to: YSGSSIAQRELG*LGSYSVLCQKC Trigger: GCACTTCTGGCACAAGACAGAGTATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 72 bp | GGACATCCCAAAGCCAAGACTGCTACCTGCCTTAATTaGTCCAGGTACAGGGATACTCTGAGCAAAGGGGAC | + |
Preference number: 6 (lower is better) Translates to: GHPKAKTATCLN*SRYRDTLSKGD Trigger: GTCCCCTTTGCTCAGAGTATCCCTGTACCTGGAGCAATTAAGGCAGGTAGCAGTCTTGGCTTTGGGATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | TCAGTGACTGGTGTTGTGGGAGAGCTTGGAGACGCCTaGGTGGAAGCAATTGAGGGATTTGAGTCTGAAGAG | + |
Preference number: 6 (lower is better) Translates to: SVTGVVGELGDA*VEAIEGFESEE Trigger: CTCTTCAGACTCAAATCCCTCAATTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAACACCAGTCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CCA 72 bp | GTTCAAATCCACACCAGGGTCTTTGGATTTGCTGGCTaGAATGACAGACGTAACCACACAGGGGGCTGTGGT | + |
Preference number: 6 (lower is better) Translates to: VQIHTRVFGFAG*NDRRNHTGGCG Trigger: ACCACAGCCCCCTGTGTGGTTACGTCTGTCATTCCAGCCAGCAAATCCAAAGACCCTGGTGTGGATTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GAAGTCACATTGGAGTTGCTTGAGGTCACTGGAGGCTaGTTTGTGGACGATAAGCCCAAAGTTGCCAGAGGG | + |
Preference number: 6 (lower is better) Translates to: EVTLELLEVTGG*FVDDKPKVARG Trigger: CCCTCTGGCAACTTTGGGCTTATCGTCCACAAACCAGCCTCCAGTGACCTCAAGCAACTCCAATGTGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | AAAGGTGTGATCTGGTTAGGAGGGCCCTGCATACTCTaGTTCCAGCATTGCACAAAGGGAGCTAGGGTGCTT | + |
Preference number: 6 (lower is better) Translates to: KGVIWLGGPCIL*FQHCTKGARVL Trigger: AAGCACCCTAGCTCCCTTTGTGCAATGCTGGAACCAGAGTATGCAGGGCCCTCCTAACCAGATCACACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 90 bp | TTGTGGGAGAGCTTGGAGACGCCTGGGTGGAAGCAATTGAGGGATTaGAGTCTGAAGAGATGCCTTGGATGTGCTCTAACTGTGAGCACC | + |
Preference number: 6 (lower is better) Translates to: LWESLETPGWKQLRD*SLKRCLGCALTVST Trigger: GGTGCTCACAGTTAGAGCACATCCAAGGCATCTCTTCAGACTCAAATCCCTCAATTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CAA 90 bp | GAGAAGACGTCTCCACGGGAAGTACAGATGCAGGAAGATGGAGAATaGGGTTACTCACCACCCCAACCAAAGTGCTTTGTGTGGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: EKTSPREVQMQEDGE*GYSPPQPKCFVWWV Trigger: CACCCACCACACAAAGCACTTTGGTTGGGGTGGTGAGTAACCCAATTCTCCATCTTCCTGCATCTGTACTTCCCGTGGAGACGTCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 90 bp | AGAAGAGGGCTGCCTGGTGTGCACAGGAGCTGTCTCAGACATAGTTaGAAGCGGTTCTATACTGCCAAAGATAGGCTTGAAGGTGGGCCT | + |
Preference number: 6 (lower is better) Translates to: RRGLPGVHRSCLRHS*KRFYTAKDRLEGGP Trigger: AGGCCCACCTTCAAGCCTATCTTTGGCAGTATAGAACCGCTTCAAACTATGTCTGAGACAGCTCCTGTGCACACCAGGCAGCCCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 90 bp | GAAGCTCCAAGCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTaGCCTGTGGTGCTGGTCACTATGTTCAAATCCACACCAGGGTCT | + |
Preference number: 6 (lower is better) Translates to: EAPSRKVLQEGTEQE*PVVLVTMFKSTPGS Trigger: AGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 90 bp | GGGCTTGACCCCAAAGATGATGTGAGTGCTGAAGTCACATTGGAGTaGCTTGAGGTCACTGGAGGCTGGTTTGTGGACGATAAGCCCAAA | + |
Preference number: 6 (lower is better) Translates to: GLDPKDDVSAEVTLE*LEVTGGWFVDDKPK Trigger: TTTGGGCTTATCGTCCACAAACCAGCCTCCAGTGACCTCAAGCAACTCCAATGTGACTTCAGCACTCACATCATCTTTGGGGTCAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 72 bp | TGGCAAGGTATAGTTAGCAGGTCCCTAGGGCCAGACTaGAGTAGAGGAATCTCTCCATTTAGCTGTCCAGAG | + |
Preference number: 6 (lower is better) Translates to: WQGIVSRSLGPD*SRGISPFSCPE Trigger: CTCTGGACAGCTAAATGGAGAGATTCCTCTACTGCAGTCTGGCCCTAGGGACCTGCTAACTATACCTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 72 bp | TCTAATGTTGGGTCCTCTTCAGTGACAACAGGACCTTaGTGGCAAGGTATAGTTAGCAGGTCCCTAGGGCCA | + |
Preference number: 6 (lower is better) Translates to: SNVGSSSVTTGP*WQGIVSRSLGP Trigger: TGGCCCTAGGGACCTGCTAACTATACCTTGCCAGCAAGGTCCTGTTGTCACTGAAGAGGACCCAACATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 72 bp | ATTGAGGGATTTGAGTCTGAAGAGATGCCTTGGATGTaGTCTAACTGTGAGCACCCGAGTGGGGCAGGCATA | + |
Preference number: 6 (lower is better) Translates to: IEGFESEEMPWM*SNCEHPSGAGI Trigger: TATGCCTGCCCCACTCGGGTGCTCACAGTTAGAGCACATCCAAGGCATCTCTTCAGACTCAAATCCCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS GCA 72 bp | TGCTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTaGTGGTCACTATGTTCAAATCCACACCAGGGTCTT | + |
Preference number: 6 (lower is better) Translates to: CCKKGQSKSCLW*WSLCSNPHQGL Trigger: AAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS GCA 72 bp | GCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTTaGCTGTGGTGCTGGTCACTATGTTCAAATCCACAC | + |
Preference number: 6 (lower is better) Translates to: AGKCCKKGQSKS*LWCWSLCSNPH Trigger: GTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GAAGCAATTGAGGGATTTGAGTCTGAAGAGATGCCTTaGATGTGCTCTAACTGTGAGCACCCGAGTGGGGCA | + |
Preference number: 6 (lower is better) Translates to: EAIEGFESEEMP*MCSNCEHPSGA Trigger: TGCCCCACTCGGGTGCTCACAGTTAGAGCACATCCAAGGCATCTCTTCAGACTCAAATCCCTCAATTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CCA 72 bp | GAAGACGTCTCCACGGGAAGTACAGATGCAGGAAGATaGAGAATTGGGTTACTCACCACCCCAACCAAAGTG | + |
Preference number: 6 (lower is better) Translates to: EDVSTGSTDAGR*RIGLLTTPTKV Trigger: CACTTTGGTTGGGGTGGTGAGTAACCCAATTCTCCATCTTCCTGCATCTGTACTTCCCGTGGAGACGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | TGCAAGAAGGGACAGAGCAAGAGTTGCCTGTGGTGCTaGTCACTATGTTCAAATCCACACCAGGGTCTTTGG | + |
Preference number: 6 (lower is better) Translates to: CKKGQSKSCLWC*SLCSNPHQGLW Trigger: CCAAAGACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | AAGTGCTGCAAGAAGGGACAGAGCAAGAGTTGCCTGTaGTGCTGGTCACTATGTTCAAATCCACACCAGGGT | + |
Preference number: 6 (lower is better) Translates to: KCCKKGQSKSCL*CWSLCSNPHQG Trigger: ACCCTGGTGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | ATCTTTCTTGCAGGAATGCCAGCCAAAGGTGTGATCTaGTTAGGAGGGCCCTGCATACTCTGGTTCCAGCAT | + |
Preference number: 6 (lower is better) Translates to: IFLAGMPAKGVI*LGGPCILWFQH Trigger: ATGCTGGAACCAGAGTATGCAGGGCCCTCCTAACCAGATCACACCTTTGGCTGGCATTCCTGCAAGAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | ATCTCAAAGGATTTCTCCCCACAGAACCCTGAACAGTaGGAGAGGACATCCCAAAGCCAAGACTGCTACCTG | + |
Preference number: 6 (lower is better) Translates to: ISKDFSPQNPEQ*ERTSQSQDCYL Trigger: CAGGTAGCAGTCTTGGCTTTGGGATGTCCTCTCCCACTGTTCAGGGTTCTGTGGGGAGAAATCCTTTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | TTGTGGGAGAGCTTGGAGACGCCTGGGTGGAAGCAATaGAGGGATTTGAGTCTGAAGAGATGCCTTGGATGT | + |
Preference number: 6 (lower is better) Translates to: LWESLETPGWKQ*RDLSLKRCLGC Trigger: ACATCCAAGGCATCTCTTCAGACTCAAATCCCTCAATTGCTTCCACCCAGGCGTCTCCAAGCTCTCCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | CCAAATATTACGCTTCAGGTAACTTTCCCACCAGTCTaGAGGAAGAGAGCCCATGATGGGGTTCTGTGGCCT | + |
Preference number: 6 (lower is better) Translates to: PNITLQVTFPPV*RKRAHDGVLWP Trigger: AGGCCACAGAACCCCATCATGGGCTCTCTTCCTTCAGACTGGTGGGAAAGTTACCTGAAGCGTAATATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | CCCAGAGAAGCAACCGGATCTCTTACATTTATCATCTaGGCTCTGGACATGGGGTCTCCTTTTCAGAGACCC | + |
Preference number: 6 (lower is better) Translates to: PREATGSLTFII*ALDMGSPFQRP Trigger: GGGTCTCTGAAAAGGAGACCCCATGTCCAGAGCTCAGATGATAAATGTAAGAGATCCGGTTGCTTCTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS TCA 72 bp | AGACTTGTCCCCACTCAAGACATCTTTCTTGGCCTCTaGGGTCCAGCTCCATCTTCCAGACAGACACTTTTC | + |
Preference number: 6 (lower is better) Translates to: RLVPTQDIFLGL*GPAPSSRQTLF Trigger: GAAAAGTGTCTGTCTGGAAGATGGAGCTGGACCTCAGAGGCCAAGAAAGATGTCTTGAGTGGGGACAAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117882.2 |
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CDS GCA 72 bp | AGATGGGTAGAATCAGAACTCAGTGAAGAAGAGGGCTaGCTGGTGTGCACAGGAGCTGTCTCAGACATAGTT | + |
Preference number: 6 (lower is better) Translates to: RWVESELSEEEG*LVCTGAVSDIV Trigger: AACTATGTCTGAGACAGCTCCTGTGCACACCAGGCAGCCCTCTTCTTCACTGAGTTCTGATTCTACCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GAAGGGAAAATTAAATCAGTGGCCGAGGGAAAGTTCTaGGAAGCTCCAAGCAGGAAAGTGCTGCAAGAAGGG | + |
Preference number: 6 (lower is better) Translates to: EGKIKSVAEGKF*EAPSRKVLQEG Trigger: CCCTTCTTGCAGCACTTTCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGGCCACTGATTTAATTTTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CCA 72 bp | GAATTGTGGGGTGTTGGGAAGGGAAAATTAAATCAGTaGCCGAGGGAAAGTTCTGGGAAGCTCCAAGCAGGA | + |
Preference number: 6 (lower is better) Translates to: ELWGVGKGKLNQ*PRESSGKLQAG Trigger: TCCTGCTTGGAGCTTCCCAGAACTTTCCCTCGGCCACTGATTTAATTTTCCCTTCCCAACACCCCACAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | TCTCCACGGGAAGTACAGATGCAGGAAGATGGAGAATaGGGTTACTCACCACCCCAACCAAAGTGCTTTGTG | + |
Preference number: 6 (lower is better) Translates to: SPREVQMQEDGE*GYSPPQPKCFV Trigger: CACAAAGCACTTTGGTTGGGGTGGTGAGTAACCCAATTCTCCATCTTCCTGCATCTGTACTTCCCGTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | GTCACTATGTTCAAATCCACACCAGGGTCTTTGGATTaGCTGGCTGGAATGACAGACGTAACCACACAGGGG | + |
Preference number: 6 (lower is better) Translates to: VTMFKSTPGSLD*LAGMTDVTTQG Trigger: CCCCTGTGTGGTTACGTCTGTCATTCCAGCCAGCAAATCCAAAGACCCTGGTGTGGATTTGAACATAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | AGCAGGAAAGTGCTGCAAGAAGGGACAGAGCAAGAGTaGCCTGTGGTGCTGGTCACTATGTTCAAATCCACA | + |
Preference number: 6 (lower is better) Translates to: SRKVLQEGTEQE*PVVLVTMFKST Trigger: TGTGGATTTGAACATAGTGACCAGCACCACAGGCAACTCTTGCTCTGTCCCTTCTTGCAGCACTTTCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | CCCAAAGATGATGTGAGTGCTGAAGTCACATTGGAGTaGCTTGAGGTCACTGGAGGCTGGTTTGTGGACGAT | + |
Preference number: 6 (lower is better) Translates to: PKDDVSAEVTLE*LEVTGGWFVDD Trigger: ATCGTCCACAAACCAGCCTCCAGTGACCTCAAGCAACTCCAATGTGACTTCAGCACTCACATCATCTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 72 bp | TGCCTGGTGTGCACAGGAGCTGTCTCAGACATAGTTTaGAGCGGTTCTATACTGCCAAAGATAGGCTTGAAG | + |
Preference number: 6 (lower is better) Translates to: CLVCTGAVSDIV*SGSILPKIGLK Trigger: CTTCAAGCCTATCTTTGGCAGTATAGAACCGCTTCAAACTATGTCTGAGACAGCTCCTGTGCACACCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 72 bp | GCAAAAGTGGCTTTGGGCTTGACCCCAAAGATGATGTaGGTGCTGAAGTCACATTGGAGTTGCTTGAGGTCA | + |
Preference number: 6 (lower is better) Translates to: AKVALGLTPKMM*VLKSHWSCLRS Trigger: TGACCTCAAGCAACTCCAATGTGACTTCAGCACTCACATCATCTTTGGGGTCAAGCCCAAAGCCACTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 72 bp | GATTGCTTTAGCCCATCTATGGCCCCAGGTGAGCTTTaGGAAGTATTTCTTTGGGATGGTGGCAAAAGTGGC | + |
Preference number: 6 (lower is better) Translates to: DCFSPSMAPGEL*EVFLWDGGKSG Trigger: GCCACTTTTGCCACCATCCCAAAGAAATACTTCTCAAAGCTCACCTGGGGCCATAGATGGGCTAAAGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | CTGCCTGGTGTGCACAGGAGCTGTCTCAGACATAGTTaGAAGCGGTTCTATACTGCCAAAGATAGGCTTGAA | + |
Preference number: 6 (lower is better) Translates to: LPGVHRSCLRHS*KRFYTAKDRLE Trigger: TTCAAGCCTATCTTTGGCAGTATAGAACCGCTTCAAACTATGTCTGAGACAGCTCCTGTGCACACCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | GTGCTGGTCACTATGTTCAAATCCACACCAGGGTCTTaGGATTTGCTGGCTGGAATGACAGACGTAACCACA | + |
Preference number: 6 (lower is better) Translates to: VLVTMFKSTPGS*DLLAGMTDVTT Trigger: TGTGGTTACGTCTGTCATTCCAGCCAGCAAATCCAAAGACCCTGGTGTGGATTTGAACATAGTGACCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 90 bp | TTGCTCACCCCCTTCAGTGTATCAGTGCTTCTAAGAGGGGATATCTaGATGGCACTAGTAAGAACCTGGCTAAAGATAGTGACCGTGTGT | + |
Preference number: 6 (lower is better) Translates to: LLTPFSVSVLLRGDI*MALVRTWLKIVTVC Trigger: ACACACGGTCACTATCTTTAGCCAGGTTCTTACTAGTGCCATCAAGATATCCCCTCTTAGAAGCACTGATACACTGAAGGGGGTGAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS TCA 72 bp | TTTTCAATGGCCATTCTGGAGTCTGGACTAATGTCCTaGGAAAATGTCTCTTCCAAGATCCTGAGAGCTCTC | + |
Preference number: 6 (lower is better) Translates to: FSMAILESGLMS*ENVSSKILRAL Trigger: GAGAGCTCTCAGGATCTTGGAAGAGACATTTTCTCAGGACATTAGTCCAGACTCCAGAATGGCCATTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017126.6 ENSMUST00000117882.2 |
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CDS CCA 72 bp | CTAAGAGGGGATATCTTGATGGCACTAGTAAGAACCTaGCTAAAGATAGTGACCGTGTGTACAGTGGGAATT | + |
Preference number: 6 (lower is better) Translates to: LRGDILMALVRT*LKIVTVCTVGI Trigger: AATTCCCACTGTACACACGGTCACTATCTTTAGCCAGGTTCTTACTAGTGCCATCAAGATATCCCCTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | CCCTTCAGTGTATCAGTGCTTCTAAGAGGGGATATCTaGATGGCACTAGTAAGAACCTGGCTAAAGATAGTG | + |
Preference number: 6 (lower is better) Translates to: PFSVSVLLRGDI*MALVRTWLKIV Trigger: CACTATCTTTAGCCAGGTTCTTACTAGTGCCATCAAGATATCCCCTCTTAGAAGCACTGATACACTGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |
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CDS CAA 72 bp | AGCGCCCTGGCTCTCGGTTCCTTAGTGTTTTTGATTTaGTACCAATACAGAATGAAGGTTCCAATGATCTCA | + |
Preference number: 6 (lower is better) Translates to: SALALGSLVFLI*YQYRMKVPMIS Trigger: TGAGATCATTGGAACCTTCATTCTGTATTGGTACAAAATCAAAAACACTAAGGAACCGAGAGCCAGGGCGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017126.6 |