Pregenerated sensors for POM121 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053293Ensembl transcript IDs: ENSMUST00000111171.6
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATaGCCAGGCTGCCACTTCCACCCTGGCGACAGGCTGGGTTTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: GFCPSVGHWLPLEQK*PGCHFHPGDRLGLL Trigger: TAGCAAACCCAGCCTGTCGCCAGGGTGGAAGTGGCAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR TCA 90 bp | TCAGTCTGTGGTGGGAAGCCCCAGCCTCCCTGTCCCTGTCCAGCGTaGGCACGGACAAATGTGCTCACACACCGAGGCTACTCCAGGATG | + |
|
Preference number: 1 (lower is better) Translates to: SVCGGKPQPPCPCPA*ARTNVLTHRGYSRM Trigger: CATCCTGGAGTAGCCTCGGTGTGTGAGCACATTTGTCCGTGCTCACGCTGGACAGGGACAGGGAGGCTGGGGCTTCCCACCACAGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR GCA 90 bp | TGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGAAGTCTTTaGTCCCAACAGGCTCCATCCCCTGGGCTGCCAGCCCTTAAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: WPGWVTWGGSTEGSL*SQQAPSPGLPALKS Trigger: TGACTTAAGGGCTGGCAGCCCAGGGGATGGAGCCTGTTGGGAGCAAAGACTTCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 90 bp | AACTCCAAACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTaGGGAGGATCAACAGAGGGAAGTCTTTGCTCCCAACAGGCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: NSKHRQKLPWPGWVT*GGSTEGSLCSQQAP Trigger: TGGAGCCTGTTGGGAGCAAAGACTTCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGTTTGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGACGGAACCGTGCCCACTaGGGTCTCCAAGGCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TQAEAALAWVGYVGRINRRNRAH*GLQGKA Trigger: TGCTTTGCCTTGGAGACCCCAGTGGGCACGGTTCCG...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGACCCTCCGTGGGGCACTaGCTTCCTCTGGAACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQAEAALAWVGYVGRINRPSVGH*LPLEQK Trigger: TTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGG...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CAA 90 bp | AGGCTTCGTGTTCAGACCCCCACCCATCCCCATCCTCACAGGCATTaGGGACCTGAGGTCAAGCTCTTCTCCAGCTCCACACAACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RLRVQTPTHPHPHRH*GPEVKLFSSSTQPS Trigger: GCTGGGTTGTGTGGAGCTGGAGAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGTCTGAACACGAAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGACTCACAGAGGACCGGTaGAGGACAAAGCAGCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGLTEDR*RTKQQE Trigger: TTCTTGCTGCTTTGTCCTTCACCGGTCCTCTGTGAG...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGCACTGGCTTCCTCTaGAACAGAAATGACCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TQAEAALAWVGYVGRINRGTGFL*NRNDQA Trigger: AGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCC...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCATTCAATTAGCTAGGCCCAGGAGGGCCCAGGTGACATTAAGTCCGGCATTAGCGGTCTGGTCTACCTaGCCCAGGTCTTCCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SIQLARPRRAQVTLSPALAVWST*PRSSWS Trigger: GCTCCAGGAAGACCTGGGGCAGGTAGACCAGACCGC...TAATGCCGGACTTAATGTCACCTGGGCCCTCCTGGGCCTAGCTAATTGAATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGCTTCTGCCCCTCCGTaGGGCACTGGCTTCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NIVQGLENTIPKRQTGPGASAPP*GTGFLW Trigger: CCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGCAGTGGTGGGCGGTCTaGTCTACCTGCCCCAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGQWWAV*STCPRS Trigger: AGACCTGGGGCAGGTAGACCAGACCGCCCACCACTG...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR GCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGTGCCAGCAGAGATGGTaGCAAGGAAAGGGGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TWQPGSGAEGYGMVLERKCQQRW*QGKGEA Trigger: AGCCTCCCCCTTTCCTTGGCACCATCTCTGCTGGCA...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR TCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGCTTCCTAGCAGGTGCTaGGGTCCAGATTCAGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: NIVQGLENTIPKRQTGPGLPSRC*GPDSGK Trigger: CTTGCCTGAATCTGGACCTCAGCACCTGCTAGGAAG...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR GCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGCTCCATCCCCTGGGCTaGCAGCCCTTAAGTCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGLHPLG*QPLSQN Trigger: GTTTTGACTTAAGGGCTGGCAGCCCAGGGGATGGAG...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR TCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGAAGTCAAAACACTATTaGGAATTCAGGAGTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TWQPGSGAEGYGMVLERKKSKHY*EFRSQH Trigger: GTGCTGACTCCTGAATTCTCAATAGTGTTTTGACTT...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAAGGCTGGGTTTGCTATaGAATTTGAAGGGTCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: REGDQGQLHHTVYKRRITRLGLL*NLKGQR Trigger: CCTCTGACCCTTCAAATTCCATAGCAAACCCAGCCT...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACACACTAAACAAGCGCTaGGGCAGCAAGAGGACAATA | + |
|
Preference number: 2 (lower is better) Translates to: QDSLPFKRNESHRGPVKDTLNKR*GSKRTI Trigger: TATTGTCCTCTTGCTGCCCCAGCGCTTGTTTAGTGT...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | TGGTGGGCGGTCTGGTCTACCTGCCCCAGGTCTTCCTaGAGCAAACGTCTCCCTCCCCTGGCTCTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WWAVWSTCPRSS*SKRLPPLALPG Trigger: GCCTGGCAGAGCCAGGGGAGGGAGACGTTTGCTCCAGGAAGACCTGGGGCAGGTAGACCAGACCGCCCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR GCA 72 bp | GGCAGCGAGAAGCAGTGGTGGGCGGTCTGGTCTACCTaGCCCAGGTCTTCCTGGAGCAAACGTCTCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSEKQWWAVWST*PRSSWSKRLPP Trigger: GGGAGGGAGACGTTTGCTCCAGGAAGACCTGGGGCAGGTAGACCAGACCGCCCACCACTGCTTCTCGCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR TCA 72 bp | CCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATaGCCAGGCTGCCACTTCCACCCTGGCGACAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSVGHWLPLEQK*PGCHFHPGDRL Trigger: CAGCCTGTCGCCAGGGTGGAAGTGGCAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR TCA 72 bp | GGTGGGAAGCCCCAGCCTCCCTGTCCCTGTCCAGCGTaGGCACGGACAAATGTGCTCACACACCGAGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GGKPQPPCPCPA*ARTNVLTHRGY Trigger: GTAGCCTCGGTGTGTGAGCACATTTGTCCGTGCTCACGCTGGACAGGGACAGGGAGGCTGGGGCTTCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR GCA 72 bp | CTCCCTGTCCCTGTCCAGCGTGAGCACGGACAAATGTaGTCACACACCGAGGCTACTCCAGGATGCCTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LPVPVQREHGQM*SHTEATPGCLR Trigger: GCGGAGGCATCCTGGAGTAGCCTCGGTGTGTGAGCACATTTGTCCGTGCTCACGCTGGACAGGGACAGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | TGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTaGAACAGAAATGACCAGGCTGCCACTTCCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WASAPPWGTGFL*NRNDQAATSTL Trigger: CAGGGTGGAAGTGGCAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | CACCGAGGCTACTCCAGGATGCCTCCGCAGGGGCCCTaGATACAGGCCTGCTGTGGAGCTGAGGTAATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HRGYSRMPPQGP*IQACCGAEVIS Trigger: GCTAATTACCTCAGCTCCACAGCAGGCCTGTATCCAGGGCCCCTGCGGAGGCATCCTGGAGTAGCCTCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR GCA 72 bp | TGGGTTACGTGGGGAGGATCAACAGAGGGAAGTCTTTaGTCCCAACAGGCTCCATCCCCTGGGCTGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WVTWGGSTEGSL*SQQAPSPGLPA Trigger: GGCTGGCAGCCCAGGGGATGGAGCCTGTTGGGAGCAAAGACTTCCCTCTGTTGATCCTCCCCACGTAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR TCA 72 bp | CCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTaGGGTCAAGCTCTTCTCCAGCTCCACACAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PHPSPSSQAFGT*GQALLQLHTTQ Trigger: CTGGGTTGTGTGGAGCTGGAGAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | CACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTaGGGAGGATCAACAGAGGGAAGTCTTTGCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HRQKLPWPGWVT*GGSTEGSLCSQ Trigger: TTGGGAGCAAAGACTTCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | GTAGAACTCCAAACACAGGCAGAAGCTGCCCTGGCCTaGGTGGGTTACGTGGGGAGGATCAACAGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VELQTQAEAALA*VGYVGRINRGK Trigger: CTTCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGTTTGGAGTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | AAATCTCAGCTACACTCACAGGAACTCAGTCTGTGGTaGGAAGCCCCAGCCTCCCTGTCCCTGTCCAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSQLHSQELSLW*EAPASLSLSSV Trigger: CACGCTGGACAGGGACAGGGAGGCTGGGGCTTCCCACCACAGACTGAGTTCCTGTGAGTGTAGCTGAGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | ACTGTTCAAGTAAAGTACTGGGCTTCTGCCCCTCCGTaGGGCACTGGCTTCCTCTGGAACAGAAATGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVQVKYWASAPP*GTGFLWNRNDQ Trigger: CTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACTTTACTTGAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGGGCGACAGGCTGGGTTaGCTATGGAATTTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TWQPGSGAEGYGMVLERKGDRLG*LWNLKG Trigger: ACCCTTCAAATTCCATAGCAAACCCAGCCTGTCGCC...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR GCA 72 bp | GAAGTCTTTGCTCCCAACAGGCTCCATCCCCTGGGCTaGCAGCCCTTAAGTCAAAACACTATTGAGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: EVFAPNRLHPLG*QPLSQNTIENS Trigger: TGAATTCTCAATAGTGTTTTGACTTAAGGGCTGGCAGCCCAGGGGATGGAGCCTGTTGGGAGCAAAGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CCA 72 bp | GGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTaGGGCAGCAAGAGGACAATATGTACAGATGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GGGCLGYTLNKR*GSKRTICTDVF Trigger: AAAAACATCTGTACATATTGTCCTCTTGCTGCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGACTCTCCCTTGGGTCCTaGCGGAGGGCAGGCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGLSLGS*RRAGSG Trigger: GCCCGAGCCTGCCCTCCGGCAGGACCCAAGGGAGAG...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGAGCCGGGAGGGAGGCTaGCGAGGCAGCAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMSREGG*RGSRPH Trigger: GTGGGGCCTGCTGCCTCGCCAGCCTCCCTCCCGGCT...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAACGTGGGTGTGGTGCTaGCTGCTGTGGGAGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQAEAALAWVGYVGRINRTWVWC*LLWEGR Trigger: CCGCCCCTCCCACAGCAGCCAGCACCACACCCACGT...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCGCCAAAGGTGGCTGGTaGTGGGGCTGCCGATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGAKGGW*WGCRWG Trigger: GCCCCATCGGCAGCCCCAGCACCAGCCACCTTTGGC...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGAGGCCAAAGCCTCCACTaGCAGCAGGAGCTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGGQSLH*QQELLS Trigger: GCTCAGCAGCTCCTGCTGGCAGTGGAGGCTTTGGCC...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGTGGTGCTGGCTGCTGTaGGAGGGGCGGTGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLWCWLL*EGRCWM Trigger: CATCCAGCACCGCCCCTCCCACAGCAGCCAGCACCA...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCTCAGCGTGGGCTGACTaGTGGTGGCAGGGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFSAWAD*WWQGPR Trigger: CCTCGGCCCCTGCCACCACCAGTCAGCCCACGCTGA...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGACCTCTTCCACAGCTGTaGGATGCCACGGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGPLPQL*DATGGA Trigger: AGCTCCACCCGTGGCATCTCACAGCTGTGGAAGAGG...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGGGGCCCTGCCAGTGGTaGGACAAGAGGGGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMGPCQW*DKRGQE Trigger: CTCTTGGCCCCTCTTGTCTCACCACTGGCAGGGCCC...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGGCCTGCTGCAGATGCTaGTGGGGCAAGAGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLACCRC*WGKRLA Trigger: GGCAAGCCTCTTGCCCCAGCAGCATCTGCAGCAGGC...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCAAGCTGGCTGAGTGCTaGCAGGGGCGCCGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGKLAEC*QGRRRW Trigger: CCACCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTT...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGGGGTGGGGAAGTCCATaGGCTCTGCTGCTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLGWGSP*ALLLPS Trigger: ACTGGGAAGCAGCAGAGCTCATGGACTTCCCCACCC...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGTGTCTTCGGAGGTaGAGGGGCTGCAACTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAEAALAWVGYVGRINRGCLRR*RGCNCC Trigger: GCAACAGTTGCAGCCCCTTCACCTCCGAAGACACCC...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGAAGGGGCTGCAACTGTTaGTGCCTCAGCAGGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGRGCNC*CLSRFR Trigger: TCGGAACCTGCTGAGGCAGCAACAGTTGCAGCCCCT...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCCAAAAGCTGGCTGAGTaGTGGCAGGGGCGCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGQKLAE*WQGRRR Trigger: CCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTTTTG...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCGGAGGCTGTGGAGGCTaGGGTGCTGACAGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFGGCGG*GADRLL Trigger: GAGCAGTCTGTCAGCACCCCAGCCTCCACAGCCTCC...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCGACTTCCAAAGGAGGTaGTGGTGCCCGGGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFDFQRR*WCPGSH Trigger: GTGGGACCCCGGGCACCACCACCTCCTTTGGAAGTC...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGCAGGGAGAAGGGAGTTaGCAGGGGCATGGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLQGEGS*QGHGCE Trigger: TTCACAGCCATGCCCCTGTCAACTCCCTTCTCCCTG...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGTCCTGGCCATCAAGGTaGAGCTGGTCTTCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMSWPSR*SWSSSA Trigger: GGCGGAGGAAGACCAGCTGCACCTTGATGGCCAGGA...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGAAAGGAGGTGCCTGCTaGAGATGCTGCTGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLKGGAC*RCCWGK Trigger: CTTGCCCCAGCAGCATCTGCAGCAGGCACCTCCTTT...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGCGGGAGGGCAGCAGCTaGATCTTGCGTTTGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMREGSS*ILRLRC Trigger: GCAACGCAAACGCAAGATCCAGCTGCTGCCCTCCCG...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCTCCCAAACAGCATGCTaGGCTTTGGGGTCGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFSQTAC*ALGSGR Trigger: CCTCCCCGACCCCAAAGCCCAGCATGCTGTTTGGGA...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGCAAGGGAGGAAGAGCTaGCAGGTGGACTCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLQGRKS*QVDSAS Trigger: GGATGCTGAGTCCACCTGCCAGCTCTTCCTCCCTTG...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCTGGTGGCCCCATCGGTaGCTCCAAATGTGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFWWPHR*LQMWAV Trigger: CACAGCCCACATTTGGAGCCACCGATGGGGCCACCA...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGGGGTGTGGTGCTGGCTaGTGTGGGAGGGGCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKGCGAG*CGRGGA Trigger: AGCACCGCCCCTCCCACAGCAGCCAGCACCACACCC...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCGGGATGGAGCAGAGCTaGCAAACAGAGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFGMEQS*QTESCC Trigger: GCAGCAGCTCTCTGTTTGGCAGCTCTGCTCCATCCC...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCAGGTGGCTGCAGGTTTaGAGTCTGAGGAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFRWLQV*SLRRCW Trigger: CCAGCACCTCCTCAGACTCCAAACCTGCAGCCACCT...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCTGCCAAACTGGAAGATaGAGGCCAGAGCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGCQTGR*RPELGQ Trigger: CTGCCCCAGCTCTGGCCTCCATCTTCCAGTTTGGCA...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGTGGGCTGACTGGTGGTaGCAGGGGCCGAGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKWADWW*QGPRWR Trigger: CCTCCACCTCGGCCCCTGCCACCACCAGTCAGCCCA...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGCTACCAAAAGCTGGCTaGGTGCTGGCAGGGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKLPKAG*VLAGAP Trigger: CGGCGCCCCTGCCAGCACTCAGCCAGCTTTTGGTAG...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGACTGAAGGCAAAGGGTaGGCCCTGGCTGGGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKTEGKG*ALAGCA Trigger: GGCGCACCCAGCCAGGGCTCACCCTTTGCCTTCAGT...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCGGGGCTGGAGACTCCTaGATCTTCTTCAAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGGAGDS*IFFKLS Trigger: GGAGAGCTTGAAGAAGATGCAGGAGTCTCCAGCCCC...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGCAAACAGAGAGCTGCTaGTCCCACTGTTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLQTESC*SHCWWS Trigger: AGACCACCAACAGTGGGAGCAGCAGCTCTCTGTTTG...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGTGCCAGAGGCCACCGTaGAAGTGGCAGTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKCQRPP*KWQCPG Trigger: GCCTGGGCACTGCCACTTCCACGGTGGCCTCTGGCA...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGACAGTACTCGCTGCAGTaGTCACTCCAAAGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGQYSLQ*SLQSQR Trigger: TCTTTGGCTTTGGAGTGACCACTGCAGCGAGTACTG...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGAGAGGCTTGCCAAACTaGAAGATGGAGGCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLRGALASSGTEMTRLRGLPN*KMEARA Trigger: AGCTCTGGCCTCCATCTTCCAGTTTGGCAAGCCTCT...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCTGTCAAAAATGGGCTTaGACGTGGGTGTGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGCQKWA*TWVWCW Trigger: CCAGCACCACACCCACGTTCAAGCCCATTTTTGACA...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACAGGGGCATGGCTGTaGATGGCTCCATCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMTGAWL*MAPSCQ Trigger: TTGACAAGATGGAGCCATTCACAGCCATGCCCCTGT...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGTCCCCCGAACAGAACTaGCTGGGAAGTGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMSPEQN*LGSGSH Trigger: ATGACTTCCACTTCCCAGTCAGTTCTGTTCGGGGGA...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGGCCAGATGTGGTAGCTaGCCCAAAGGAGAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMARCGS*PKGEHR Trigger: TCTGTGTTCTCCTTTGGGTCAGCTACCACATCTGGC...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCATGAGCGGAATAGCTTaGTGTCTGGAGGGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGMSGIA*CLEGQS Trigger: GGATTGCCCCTCCAGACAGCAAGCTATTCCGCTCAT...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGGGCCTCTCTGGTGTCTaGGAGCGGGAGGAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKGLSGV*EREEAG Trigger: TCCAGCTTCCTCCCGCTCCCAGACACCAGAGAGGCC...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCGGGAAGTGGAAGTCATaGTACTGCTGGCAGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFGKWKS*YCWQYS Trigger: CGAGTACTGCCAGCAGTACCATGACTTCCACTTCCC...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGCATTCAATTAGCTAGGCCCAGGAGGGCCCAGGTGACATTAAGTCCGGCATTAGCCAAAGACAGGCTTTaGGGCAGAAGCTGCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIQLARPRRAQVTLSPALAKDRL*GRSCGA Trigger: GGCACCGCAGCTTCTGCCTCAAAGCCTGTCTTTGGC...TAATGCCGGACTTAATGTCACCTGGGCCCTCCTGGGCCTAGCTAATTGAATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCACTGGACTGCTGACATaGCTCCTCCTCTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFTGLLT*LLLSCL Trigger: AAGACAAGAGAGGAGGAGCCATGTCAGCAGTCCAGT...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGCCAAGCTCTGGGGGTaGAGGCAAGGTGAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGAKLWG*RQGELV Trigger: GACCAGCTCACCTTGCCTCCACCCCCAGAGCTTGGC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGGAATGTGAATGGGGATaGAGCAGAGCTGCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMECEWG*SRAAKQ Trigger: CTGTTTGGCAGCTCTGCTCCATCCCCATTCACATTC...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGCATTCAATTAGCTAGGCCCAGGAGGGCCCAGGTGACATTAAGTCCGGCATTAGCGCCCAGGGTGTTCTaGCTCAGACTTCCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIQLARPRRAQVTLSPALAPRVF*LRLPKE Trigger: CTCCTTTGGAAGTCTGAGTCAGAACACCCTGGGCGC...TAATGCCGGACTTAATGTCACCTGGGCCCTCCTGGGCCTAGCTAATTGAATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGCCAGCCCCAGGAAGGTaGCTGCAGGTTTGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGPAPGR*LQVWSL Trigger: CAGACTCCAAACCTGCAGCCACCTTCCTGGGGCTGG...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGAAGCCGGAGCTGGAGTaGCAAGGGAGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGKPELE*QGRKSW Trigger: CCAGCTCTTCCTCCCTTGCCACTCCAGCTCCGGCTT...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGGAGCTGGCAAGGGGCTaGCTAAAGGAGGTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGELARG*LKEVPA Trigger: AGCAGGCACCTCCTTTAGCCAGCCCCTTGCCAGCTC...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGGGTGCTACCAAAAGCTaGCTGAGTGCTGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGGATKS*LSAGRG Trigger: GCCCCTGCCAGCACTCAGCCAGCTTTTGGTAGCACC...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACTGCGTTGCCCGGAGCTaGCAGGTGTGGGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDCVARS*QVWVGK Trigger: CTTCCCCACCCACACCTGGCAGCTCCGGGCAACGCA...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGGCTGCAACTGTTGCTaGCTCAGCAGGTTCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGGCNCC*LSRFRG Trigger: TCCTCGGAACCTGCTGAGGCAGCAACAGTTGCAGCC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGCATTCAATTAGCTAGGCCCAGGAGGGCCCAGGTGACATTAAGTCCGGCATTACTGGGGCAAGAGGCTTaGCAAACTGGAAGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIQLARPRRAQVTLSPALLGQEA*QTGRWR Trigger: CCTCCATCTTCCAGTTTGGCAAGCCTCTTGCCCCAG...TAATGCCGGACTTAATGTCACCTGGGCCCTCCTGGGCCTAGCTAATTGAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGGGGAGGAAGCTGGACTaGAGAAGGGAGAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKGRKLD*RREKMW Trigger: CCACATCTTCTCCCTTCTCCAGTCCAGCTTCCTCCC...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGGAGCGGGAGGAAGCTaGACTGGAGAAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGGAGGS*TGEGRR Trigger: TCTTCTCCCTTCTCCAGTCCAGCTTCCTCCCGCTCC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGGCTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGGGGCATGGCTGTGAATaGCTCCATCTTGTCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: STGLLPLRGALASSGTEMGHGCE*LHLVKN Trigger: ATTTTTGACAAGATGGAGCCATTCACAGCCATGCCC...CATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAGCCCAGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGCATTCAATTAGCTAGGCCCAGGAGGGCCCAGGTGACATTAAGTCCGGCATTATGCTGCAGATGCTGCTaGGGCAAGAGGCTTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQLARPRRAQVTLSPALCCRCC*GKRLAK Trigger: TTTGGCAAGCCTCTTGCCCCAGCAGCATCTGCAGCA...TAATGCCGGACTTAATGTCACCTGGGCCCTCCTGGGCCTAGCTAATTGAATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACCAGCACTGCCAAAGGTaGCTGGTGCTGGGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDQHCQR*LVLGLP Trigger: CGGCAGCCCCAGCACCAGCCACCTTTGGCAGTGCTG...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGGTTCAAGTGGTCATCTaGGCTCTGGGAAGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKVQVVI*ALGSQT Trigger: AGTCTGGCTTCCCAGAGCTCAGATGACCACTTGAAC...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGACAGACTGCTCAGCCTaGGAGACTCCAGAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGTDCSA*ETPEDL Trigger: CAAGTCCTCTGGAGTCTCTCAGGCTGAGCAGTCTGT...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACTGGAGTCTGAGGAGGTaGTGGCTAGGGGCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDWSLRR*WLGALP Trigger: TGGCAGGGCCCCTAGCCAGCACCTCCTCAGACTCCA...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAAGGCAGAAGCTGCGGTaGCAGAGGCCACCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITRQKLR*QRPPWK Trigger: CTTCCACGGTGGCCTCTGGCACCGCAGCTTCTGCCT...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACAGTCTGAGGAGGTGCTaGCTAGGGGCCCTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDSLRRC*LGALPV Trigger: CACTGGCAGGGCCCCTAGCCAGCACCTCCTCAGACT...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGATGGAGGCCAGAGCTaGGGCAGAGCTAGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGDGGQS*GRARSS Trigger: ACTACTTCTAGCTCTGCCCCAGCTCTGGCCTCCATC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAACTGCCAAAGGTGGCTaGTGCTGGGGCTGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITTAKGG*CWGCRW Trigger: CCATCGGCAGCCCCAGCACCAGCCACCTTTGGCAGT...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGAGTAAAGAGAGGAGCTaGTGTGGCTGTAGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGSKERS*CGCSGG Trigger: GCCACCACTACAGCCACATCAGCTCCTCTCTTTACT...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGCCAGCAGGAGCTGCTaGGCCACCGAATGTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITASRSC*ATECEW Trigger: CCATTCACATTCGGTGGCTCAGCAGCTCCTGCTGGC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACGGTGCCTGCTGCAGATaGTGCTGGGGCAAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDGACCR*CWGKRL Trigger: AAGCCTCTTGCCCCAGCAGCATCTGCAGCAGGCACC...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGCTAAAGGAGGTGCCTaGTGCAGATGCTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITAKGGA*CRCCWG Trigger: GCCCCAGCAGCATCTGCAGCAGGCACCTCCTTTAGC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACCTGGCTGTGCAGCACTaGCAAAGGTGGCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDLAVQH*QRWLVL Trigger: CAGCACCAGCCACCTTTGGCAGTGCTGCACAGCCAG...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACACAAGTGCTGGCTTGGTaGCCCCATCGGTGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITQVLAW*PHRWLQ Trigger: TTGGAGCCACCGATGGGGCCACCAAGCCAGCACTTG...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGAGCTCACAGAGGAGGTaGGAGACCGTTTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGSSQRR*ETVCSS Trigger: ACTTGAACAAACGGTCTCGCACCTCCTCTGTGAGCT...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGAAGTCCATGAGCTCTaGTGCTTCCCAGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NIVQGLENTIPKRQTGPGEVHEL*CFPVVV Trigger: TACAACCACTGGGAAGCAGCAGAGCTCATGGACTTC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCATCCCCATCCTCACAGGCATTTGGGACCTGAGGTCAAGCTCTTCACTTTTAGGTGTGGCTaGAAAAATGGGCTTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPTHPHPHRHLGPEVKLFTFRCG*KNGLKH Trigger: ATGTTTAAGCCCATTTTTCCAGCCACACCTAAAAGT...GAAGAGCTTGACCTCAGGTCCCAAATGCCTGTGAGGATGGGGATGGGTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACACGGTGGCTCCAAATGTaGGCTGTGAGTTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITRWLQM*AVSWLQ Trigger: CTGGAGCCAACTCACAGCCCACATTTGGAGCCACCG...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACATCCAAATGTGGGCTGTaGGTTGGCTCCAGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITSKCGL*VGSRVG Trigger: ACCTACCCTGGAGCCAACTCACAGCCCACATTTGGA...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACAGGCTTAGGCACAAATaGAGCAGGGACTCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDRLRHK*SRDSVG Trigger: GCCAACGGAGTCCCTGCTGCATTTGTGCCTAAGCCT...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | ACATGGCAGCCAGGCTCTGGGGCTGAAGGGTATGGTATGGTTTTGGAAAGAAAGACCTTGTTAAACCATTaGAGTGAGGCTTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWQPGSGAEGYGMVLERKTLLNH*SEAFLS Trigger: GGAGAGGAAAGCCTCACTGCAATGGTTTAACAAGGT...CTTTCTTTCCAAAACCATACCATACCCTTCAGCCCCAGAGCCTGGCTGCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACTGCCAAACAGAGAGCTaGTGCTCCCACTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDCQTES*CSHCWW Trigger: CCACCAACAGTGGGAGCAGCAGCTCTCTGTTTGGCA...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACTGCTGCCAAAACCACTaGAGCCACTATTGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDCCQNH*SHYCWQ Trigger: CTGCCAGCAATAGTGGCTTCAGTGGTTTTGGCAGCA...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGTCCAGATCCAAAGCTaGAAGTTCCAGAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITVQIQS*KFQRWS Trigger: GCTCCACCTCTGGAACTTTCAGCTTTGGATCTGGAC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR GCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACGCTGTAGCAGTTGTCTaGTTCAGGGAGAAGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDAVAVV*FREKGV Trigger: AACTCCCTTCTCCCTGAAGCAGACAACTGCTACAGC...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACACTTCTCTTGTTTTCCTaGCCATCAAGGTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REGDQGQLHHTVYKRRITLLLFS*PSRCSW Trigger: CCAGCTGCACCTTGATGGCCAGGAAAACAAGAGAAG...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CCA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACTGGTCATCTGAGCTCTaGGAAGCCAGACTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDSLPFKRNESHRGPVKDWSSEL*EARLLF Trigger: GAAGAGAAGTCTGGCTTCCCAGAGCTCAGATGACCA...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| 3UTR CAA 72 bp | GGTTTTGGAAAGAAAGACAGGCTAGGTAGGAACCTTTaGAGAATACAACTAAGGACTATATTAAGTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFGKKDRLGRNL*RIQLRTILSVV Trigger: AACTACACTTAATATAGTCCTTAGTTGTATTCTCAAAAGGTTCCTACCTAGCCTGTCTTTCTTTCCAAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 90 bp | GCCGAAGGTGGAGGCTGCGGCTTTCAACCCTCCGAAAGCTGGCTGTaGAGCACTGCCAAAGGTGGCTGGTGCTGGGGCTGCCGATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEGGGCGFQPSESWL*STAKGGWCWGCRWG Trigger: GCCCCATCGGCAGCCCCAGCACCAGCCACCTTTGGCAGTGCTGCACAGCCAGCTTTCGGAGGGTTGAAAGCCGCAGCCTCCACCTTCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 90 bp | AGGGGCGCCGAAGGTGGAGGCTGCGGCTTTCAACCCTCCGAAAGCTaGCTGTGCAGCACTGCCAAAGGTGGCTGGTGCTGGGGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RGAEGGGCGFQPSES*LCSTAKGGWCWGCR Trigger: TCGGCAGCCCCAGCACCAGCCACCTTTGGCAGTGCTGCACAGCCAGCTTTCGGAGGGTTGAAAGCCGCAGCCTCCACCTTCGGCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 90 bp | AAGTGCTGGCTTGGTGGCCCCATCGGTGGCTCCAAATGTGGGCTGTaGGTTGGCTCCAGGGTAGGTTGGGAGCGCAGGCTTGGCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KCWLGGPIGGSKCGL*VGSRVGWERRLGTG Trigger: TCCAGTGCCAAGCCTGCGCTCCCAACCTACCCTGGAGCCAACTCACAGCCCACATTTGGAGCCACCGATGGGGCCACCAAGCCAGCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 90 bp | AGCACAAGCCGGAGCTGGAGTGGCAAGGGAGGAAGAGCTGGCAGGTaGACTCAGCATCCCAAACAGCATGCTGGGCTTTGGGGTCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STSRSWSGKGGRAGR*TQHPKQHAGLWGRG Trigger: TCCCCGACCCCAAAGCCCAGCATGCTGTTTGGGATGCTGAGTCCACCTGCCAGCTCTTCCTCCCTTGCCACTCCAGCTCCGGCTTGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGGTTGGGAGCGCAGGCTaGGCACTGGAGCTAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPLRGALASSGTEMTRLVGSAG*ALELKG Trigger: TCCCTTTAGCTCCAGTGCCAAGCCTGCGCTCCCAAC...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGGGAATGGCTCCTCCTCTCTaGTCTTCTTGGCTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQKLPWPGWVTWGGSTEGMAPPL*SSWLAS Trigger: AGAGGCCAGCCAAGAAGACAAGAGAGGAGGAGCCAT...TCCCTCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCAGAAGCTGCCCTGGCCTGGGTGGGTTACGTGGGGAGGATCAACAGAGCTGAGGCCACAGAGTaGCCGAAAGTGAACGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQAEAALAWVGYVGRINRAEATE*PKVNEL Trigger: CAGCTCGTTCACTTTCGGCAACTCTGTGGCCTCAGC...TCTGTTGATCCTCCCCACGTAACCCACCCAGGCCAGGGCAGCTTCTGCCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCCCCTCCGTGGGGCACTGGCTTCCTCTGGAACAGAAATGACCAGGCTGTCCTCTCTTGTCTTCTaGGCTGGCCTCTCTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPLRGALASSGTEMTRLSSLVF*AGLSGV Trigger: GACACCAGAGAGGCCAGCCAAGAAGACAAGAGAGGA...CAGCCTGGTCATTTCTGTTCCAGAGGAAGCCAGTGCCCCACGGAGGGGCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | GTGCCAAGGAAAGGGGGAGGCTGCCTAGGTTACACACTAAACAAGCGCTGGGGCTCTCCTGGGGACTCCTaGTCTGTCACCAAGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPRKGGGCLGYTLNKRWGSPGDS*SVTKGG Trigger: ACCTCCCTTGGTGACAGACAAGGAGTCCCCAGGAGA...GCCCCAGCGCTTGTTTAGTGTGTAACCTAGGCAGCCTCCCCCTTTCCTTGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 90 bp | AGACTGCTCAGCCTGAGAGACTCCAGAGGACTTGCTGTCAGTGAGTaGGGTTATAGACGAAGCAGAAGCCAGCCCCAGGAAGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLSLRDSRGLAVSE*GYRRSRSQPQEGGC Trigger: GCAGCCACCTTCCTGGGGCTGGCTTCTGCTTCGTCTATAACCCCACTCACTGACAGCAAGTCCTCTGGAGTCTCTCAGGCTGAGCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 90 bp | GGGCTCCCCCGAACAGAACTGACTGGGAAGTGGAAGTCATGGTACTaGTGGCAGTACTCGCTGCAGTGGTCACTCCAAAGCCAAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPRTELTGKWKSWY*WQYSLQWSLQSQRQ Trigger: CTGTCTTTGGCTTTGGAGTGACCACTGCAGCGAGTACTGCCAGCAGTACCATGACTTCCACTTCCCAGTCAGTTCTGTTCGGGGGAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGACAGCATGCTGGGCTTaGGGGTCGGGGAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIVQGLENTIPKRQTGPGTACWA*GSGRRL Trigger: CAGCCTCCTCCCCGACCCCAAAGCCCAGCATGCTGT...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 90 bp | AAGAGAGGAGCTGATGTGGCTGTAGTGGTGGCTGTAGCAGTTGTCTaGTTCAGGGAGAAGGGAGTTGACAGGGGCATGGCTGTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRGADVAVVVAVAVV*FREKGVDRGMAVNG Trigger: GCCATTCACAGCCATGCCCCTGTCAACTCCCTTCTCCCTGAAGCAGACAACTGCTACAGCCACCACTACAGCCACATCAGCTCCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGGCAGCAGGGACTCCGTaGGCCACAAGGGGCTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NIVQGLENTIPKRQTGPGAAGTP*ATRGSN Trigger: ATTCGAGCCCCTTGTGGCCAACGGAGTCCCTGCTGC...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | CACACAACCCAGCCTAACCCCTGCCATAAAACATTCAATCCCAGTCACAAAGGGGGCAGCAGCTGGATCTaGCGTTTGCGTTGCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HTTQPNPCHKTFNPSHKGGSSWI*RLRCPE Trigger: CTCCGGGCAACGCAAACGCAAGATCCAGCTGCTGCC...CCCTTTGTGACTGGGATTGAATGTTTTATGGCAGGGGTTAGGCTGGGTTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AACATAGTACAAGGCTTGGAAAATACAATCCCGAAGAGGCAAACTGGCCCGGGGAAGGTGGCTGCAGGTTaGGAGTCTGAGGAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIVQGLENTIPKRQTGPGKVAAG*ESEEVL Trigger: CAGCACCTCCTCAGACTCCAAACCTGCAGCCACCTT...CCCCGGGCCAGTTTGCCTCTTCGGGATTGTATTTTCCAAGCCTTGTACTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGTGGGGGTGACAGTGTaGCTGAAGGTCAGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: REGDQGQLHHTVYKRRITVGVTV*LKVSVG Trigger: GCCCACGCTGACCTTCAGCAACACTGTCACCCCCAC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | CAAGATTCACTGCCATTTAAAAGGAATGAATCTCACAGAGGACCGGTGAAGGACAAGGGGCTGCAACTGTaGCTGCCTCAGCAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QDSLPFKRNESHRGPVKDKGLQL*LPQQVP Trigger: CGGAACCTGCTGAGGCAGCAACAGTTGCAGCCCCTT...GTCCTTCACCGGTCCTCTGTGAGATTCATTCCTTTTAAATGGCAGTGAATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGAGACTCCAGAGGACTaGCTGTCAGTGAGTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: REGDQGQLHHTVYKRRITETPED*LSVSGV Trigger: AACCCCACTCACTGACAGCAAGTCCTCTGGAGTCTC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGGACCAGGGACAGCTACATCACACTGTTTATAAAAGAAGAATCACAGAAGCATCATCTGGCTaGTCCTCCAAGACCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: REGDQGQLHHTVYKRRITEASSG*SSKTLL Trigger: TAACAAGGTCTTGGAGGACAAGCCAGATGATGCTTC...TGTGATTCTTCTTTTATAAACAGTGTGATGTAGCTGTCCCTGGTCCCCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | GCCGGAGGCGGTGAAGCGGTGAGAGCTGGCCGCGGGTaGCGGCGCGCGTCGCGCACGAAGGACGACAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGGGEAVRAGRG*RRASRTKDDRA Trigger: GGCCCTGTCGTCCTTCGTGCGCGACGCGCGCCGTCACCCGCGGCCAGCTCTCACCGCTTCACCGCCTCCGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | AAGGGTGAGCCCTGGCTGGGTGCGCCCAGGGTGTTCTaGCTCAGACTTCCAAAGGAGGTGGTGGTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KGEPWLGAPRVF*LRLPKEVVVPG Trigger: CCCGGGCACCACCACCTCCTTTGGAAGTCTGAGTCAGAACACCCTGGGCGCACCCAGCCAGGGCTCACCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | CGGCTTTCAACCCTCCGAAAGCTGGCTGTGCAGCACTaGCAAAGGTGGCTGGTGCTGGGGCTGCCGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSTLRKLAVQH*QRWLVLGLPMG Trigger: CCCCATCGGCAGCCCCAGCACCAGCCACCTTTGGCAGTGCTGCACAGCCAGCTTTCGGAGGGTTGAAAGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | GGAGGCTGCGGCTTTCAACCCTCCGAAAGCTGGCTGTaGAGCACTGCCAAAGGTGGCTGGTGCTGGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGCGFQPSESWL*STAKGGWCWGC Trigger: GCAGCCCCAGCACCAGCCACCTTTGGCAGTGCTGCACAGCCAGCTTTCGGAGGGTTGAAAGCCGCAGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | GGAAGGTGGCTGCAGGTTTGGAGTCTGAGGAGGTGCTaGCTAGGGGCCCTGCCAGTGGTGAGACAAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRWLQVWSLRRC*LGALPVVRQEG Trigger: CCCCTCTTGTCTCACCACTGGCAGGGCCCCTAGCCAGCACCTCCTCAGACTCCAAACCTGCAGCCACCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | TGGCCCCATCGGTGGCTCCAAATGTGGGCTGTGAGTTaGCTCCAGGGTAGGTTGGGAGCGCAGGCTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WPHRWLQMWAVS*LQGRLGAQAWH Trigger: GTGCCAAGCCTGCGCTCCCAACCTACCCTGGAGCCAACTCACAGCCCACATTTGGAGCCACCGATGGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | GTGCTGGCTTGGTGGCCCCATCGGTGGCTCCAAATGTaGGCTGTGAGTTGGCTCCAGGGTAGGTTGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLAWWPHRWLQM*AVSWLQGRLGA Trigger: CGCTCCCAACCTACCCTGGAGCCAACTCACAGCCCACATTTGGAGCCACCGATGGGGCCACCAAGCCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | CTTGGTGGCCCCATCGGTGGCTCCAAATGTGGGCTGTaGGTTGGCTCCAGGGTAGGTTGGGAGCGCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGGPIGGSKCGL*VGSRVGWERRL Trigger: AAGCCTGCGCTCCCAACCTACCCTGGAGCCAACTCACAGCCCACATTTGGAGCCACCGATGGGGCCACCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | AAGGAGAACACAGACGTGGTGCTACCAAAAGCTGGCTaGGTGCTGGCAGGGGCGCCGAAGGTGGAGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: KENTDVVLPKAG*VLAGAPKVEAA Trigger: CGCAGCCTCCACCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTTTTGGTAGCACCACGTCTGTGTTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | GCAGCAGCTGGATCTTGCGTTTGCGTTGCCCGGAGCTaGCAGGTGTGGGTGGGGAAGTCCATGAGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAAGSCVCVARS*QVWVGKSMSSA Trigger: AGCAGAGCTCATGGACTTCCCCACCCACACCTGGCAGCTCCGGGCAACGCAAACGCAAGATCCAGCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | CCAGGAAGGTGGCTGCAGGTTTGGAGTCTGAGGAGGTaGTGGCTAGGGGCCCTGCCAGTGGTGAGACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGRWLQVWSLRR*WLGALPVVRQE Trigger: CTCTTGTCTCACCACTGGCAGGGCCCCTAGCCAGCACCTCCTCAGACTCCAAACCTGCAGCCACCTTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | AGAACACAGACGTGGTGCTACCAAAAGCTGGCTGAGTaGTGGCAGGGGCGCCGAAGGTGGAGGCTGCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTQTWCYQKLAE*WQGRRRWRLRL Trigger: AAGCCGCAGCCTCCACCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTTTTGGTAGCACCACGTCTGTGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | CTCCCTGTGGTGCCTACGCCGGGGGCAGGGGCACTCTaGCCGAAAGTAGGTGTAGATGTGCCTCCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: LPVVPTPGAGAL*PKVGVDVPPNT Trigger: TGTGTTTGGAGGCACATCTACACCTACTTTCGGGCAGAGTGCCCCTGCCCCCGGCGTAGGCACCACAGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | GCCCTGCCAGTGGTGAGACAAGAGGGGCCAAGAGGCTaGGTGTCTTCGGAGGTGAAGGGGCTGCAACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALPVVRQEGPRG*VSSEVKGLQLL Trigger: CAACAGTTGCAGCCCCTTCACCTCCGAAGACACCCAGCCTCTTGGCCCCTCTTGTCTCACCACTGGCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | TTGCTGGCAGCAGTCTGGGTAGAGCTGGCAAGGGGCTaGCTAAAGGAGGTGCCTGCTGCAGATGCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAAVWVELARG*LKEVPAADAAG Trigger: CCCAGCAGCATCTGCAGCAGGCACCTCCTTTAGCCAGCCCCTTGCCAGCTCTACCCAGACTGCTGCCAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | ACACAGACGTGGTGCTACCAAAAGCTGGCTGAGTGCTaGCAGGGGCGCCGAAGGTGGAGGCTGCGGCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TQTWCYQKLAEC*QGRRRWRLRLS Trigger: TGAAAGCCGCAGCCTCCACCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTTTTGGTAGCACCACGTCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | CCCAAAGGAGAACACAGACGTGGTGCTACCAAAAGCTaGCTGAGTGCTGGCAGGGGCGCCGAAGGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKGEHRRGATKS*LSAGRGAEGGG Trigger: GCCTCCACCTTCGGCGCCCCTGCCAGCACTCAGCCAGCTTTTGGTAGCACCACGTCTGTGTTCTCCTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | GCTTTCAGGTGTACTGCCCACACTGAAGGCAAAGGGTaGGCCCTGGCTGGGTGCGCCCAGGGTGTTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: AFRCTAHTEGKG*ALAGCAQGVLT Trigger: AGTCAGAACACCCTGGGCGCACCCAGCCAGGGCTCACCCTTTGCCTTCAGTGTGGGCAGTACACCTGAAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | GCTGCAGATGCTGCTGGGGCAAGAGGCTTGCCAAACTaGAAGATGGAGGCCAGAGCTGGGGCAGAGCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AADAAGARGLPN*KMEARAGAELE Trigger: TTCTAGCTCTGCCCCAGCTCTGGCCTCCATCTTCCAGTTTGGCAAGCCTCTTGCCCCAGCAGCATCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | GGCTGCAACTGTTGCTGCCTCAGCAGGTTCCGAGGATaGTGGGGCTGGAGACTCCTGCATCTTCTTCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCNCCCLSRFRG*WGWRLLHLLQA Trigger: AGCTTGAAGAAGATGCAGGAGTCTCCAGCCCCATCATCCTCGGAACCTGCTGAGGCAGCAACAGTTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | GGAAGTGGCAGTGCCCAGGCCAGTAAAGAGAGGAGCTaGTGTGGCTGTAGTGGTGGCTGTAGCAGTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSGSAQASKERS*CGCSGGCSSCL Trigger: CAGACAACTGCTACAGCCACCACTACAGCCACATCAGCTCCTCTCTTTACTGGCCTGGGCACTGCCACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | GCTGATGTGGCTGTAGTGGTGGCTGTAGCAGTTGTCTaGTTCAGGGAGAAGGGAGTTGACAGGGGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADVAVVVAVAVV*FREKGVDRGMA Trigger: AGCCATGCCCCTGTCAACTCCCTTCTCCCTGAAGCAGACAACTGCTACAGCCACCACTACAGCCACATCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | CTCCCCCGAACAGAACTGACTGGGAAGTGGAAGTCATaGTACTGCTGGCAGTACTCGCTGCAGTGGTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LPRTELTGKWKS*YCWQYSLQWSL Trigger: GAGTGACCACTGCAGCGAGTACTGCCAGCAGTACCATGACTTCCACTTCCCAGTCAGTTCTGTTCGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CAA 90 bp | AGGGAGAAGGGAGTTGACAGGGGCATGGCTGTGAATGGCTCCATCTaGTCAAAAATGGGCTTGAACGTGGGTGTGGTGCTGGCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: REKGVDRGMAVNGSI*SKMGLNVGVVLAAV Trigger: CACAGCAGCCAGCACCACACCCACGTTCAAGCCCATTTTTGACAAGATGGAGCCATTCACAGCCATGCCCCTGTCAACTCCCTTCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS TCA 72 bp | AGCGGTGGCAGCAGCACCAAAGCCAGATGTGGTAGCTaGCCCAAAGGAGAACACAGACGTGGTGCTACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGGSSTKARCGS*PKGEHRRGATK Trigger: TTTGGTAGCACCACGTCTGTGTTCTCCTTTGGGTCAGCTACCACATCTGGCTTTGGTGCTGCTGCCACCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | AGCCTGAGAGACTCCAGAGGACTTGCTGTCAGTGAGTaGGGTTATAGACGAAGCAGAAGCCAGCCCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLRDSRGLAVSE*GYRRSRSQPQE Trigger: TTCCTGGGGCTGGCTTCTGCTTCGTCTATAACCCCACTCACTGACAGCAAGTCCTCTGGAGTCTCTCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | CTGCCAGGTGTGGGTGGGGAAGTCCATGAGCTCTGCTaGTTCCCAGTGGTTGTATCTGTAACCTTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPGVGGEVHELC*FPVVVSVTFSP Trigger: AGGAGAAAAGGTTACAGATACAACCACTGGGAAGCAGCAGAGCTCATGGACTTCCCCACCCACACCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | GAGCTGCCAGGTGTGGGTGGGGAAGTCCATGAGCTCTaGTGCTTCCCAGTGGTTGTATCTGTAACCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELPGVGGEVHEL*CFPVVVSVTFS Trigger: AGAAAAGGTTACAGATACAACCACTGGGAAGCAGCAGAGCTCATGGACTTCCCCACCCACACCTGGCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS GCA 72 bp | CGAACAGAACTGACTGGGAAGTGGAAGTCATGGTACTaGTGGCAGTACTCGCTGCAGTGGTCACTCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTELTGKWKSWY*WQYSLQWSLQS Trigger: GCTTTGGAGTGACCACTGCAGCGAGTACTGCCAGCAGTACCATGACTTCCACTTCCCAGTCAGTTCTGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||
| CDS CCA 72 bp | ACAGAACTGACTGGGAAGTGGAAGTCATGGTACTGCTaGCAGTACTCGCTGCAGTGGTCACTCCAAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TELTGKWKSWYC*QYSLQWSLQSQ Trigger: TTGGCTTTGGAGTGACCACTGCAGCGAGTACTGCCAGCAGTACCATGACTTCCACTTCCCAGTCAGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111171.6 |
||