Pregenerated sensors for POLR3H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022476Ensembl transcript IDs: ENSMUST00000023113.7, ENSMUST00000230050.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACCAAACAGTCCTTGTGATGGGGAAGCAGCTCCCCTGGGAGAATaGCTCCCTGGTGTGCACGAGTCCTGGGACCCATCCCTACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PPNSPCDGEAAPLGE*LPGVHESWDPSLPS Trigger: GGAAGGTAGGGATGGGTCCCAGGACTCGTGCACACCAGGGAGGCATTCTCCCAGGGGAGCTGCTTCCCCATCACAAGGACTGTTTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 90 bp | GCCAGTGAGAAAGGGACAGTAGGACTAGACAGTCATCTGTGGACCTaGGGCTGCCCTCATGGTCAGCTGAGGCAGCAGCAGCCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ASEKGTVGLDSHLWT*GCPHGQLRQQQPQA Trigger: AGCCTGGGGCTGCTGCTGCCTCAGCTGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCTTTCTCACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR TCA 90 bp | CTGCCCTCATGGTCAGCTGAGGCAGCAGCAGCCCCAGGCTTCCTATaGGTAGGCCTCCATCTCCACTTTCTAGACAGGGAGGGGTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LPSWSAEAAAAPGFL*VGLHLHFLDREGFG Trigger: GCCAAACCCCTCCCTGTCTAGAAAGTGGAGATGGAGGCCTACTCATAGGAAGCCTGGGGCTGCTGCTGCCTCAGCTGACCATGAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 90 bp | GACACTCTGGAGACGATTCAGGGTGGCTCCAGACCAGAGAAGCAGTaGTGGGGAGGGAGAGGACAAGCACTTGTCACTGCTCCTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: DTLETIQGGSRPEKQ*WGGRGQALVTAPGP Trigger: GGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTCCCTCCCCAGCACTGCTTCTCTGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR GCA 90 bp | CTTGTGATGGGGAAGCAGCTCCCCTGGGAGAATGCCTCCCTGGTGTaGACGAGTCCTGGGACCCATCCCTACCTTCCACATAGGCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LVMGKQLPWENASLV*TSPGTHPYLPHRLK Trigger: CTTGAGCCTATGTGGAAGGTAGGGATGGGTCCCAGGACTCGTGCACACCAGGGAGGCATTCTCCCAGGGGAGCTGCTTCCCCATCACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 90 bp | ACAAGTGCCAGTGAGAAAGGGACAGTAGGACTAGACAGTCATCTGTaGACCTGGGGCTGCCCTCATGGTCAGCTGAGGCAGCAGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: TSASEKGTVGLDSHL*TWGCPHGQLRQQQP Trigger: GGGCTGCTGCTGCCTCAGCTGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCTTTCTCACTGGCACTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 90 bp | ACCAGAGAAGCAGTGCTGGGGAGGGAGAGGACAAGCACTTGTCACTaGTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: TREAVLGRERTSTCH*SWSHQAWLWRTLKL Trigger: CAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTCCCTCCCCAGCACTGCTTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR GCA 90 bp | ACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTaGTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TAPGPTKLGSGEHSN*SLLSQVWTGSSGWA Trigger: TGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR GCA 90 bp | AATCTGCCCCAGGACACAGCTAATAATCAAATGCTGCATGCTGTCTaGCCCTCTAGCCTCCGCAGCAGAGATGTGAGGAGACAGGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: NLPQDTANNQMLHAV*PSSLRSRDVRRQAL Trigger: GAGAGCCTGTCTCCTCACATCTCTGCTGCGGAGGCTAGAGGGGCAGACAGCATGCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 90 bp | ATTCCATCAGGCCTTGGTCACATCTGGACCCTGGTCACAAGTACCTaGAGTAGAGGAGAGCTTCAGAGACCAAGAGCTACCTCCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: IPSGLGHIWTLVTST*SRGELQRPRATSSV Trigger: AACAGAGGAGGTAGCTCTTGGTCTCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCCAGATGTGACCAAGGCCTGATGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 90 bp | AAACTCCAGGCTACTCTATGCTATACAGCAAGTGAGAAGCCAGCCTaGATCCATGACACTCTGGAGACGATTCAGGGTGGCTCCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: KLQATLCYTASEKPA*IHDTLETIQGGSRP Trigger: TGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGCTGTATAGCATAGAGTAGCCTGGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 90 bp | CTTCCACATAGGCTCAAGGTGGCACTGCACACCTGGAATCCCAGCTaGAGGATCAGAAACTCCAGGCTACTCTATGCTATACAGCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LPHRLKVALHTWNPS*RIRNSRLLYAIQQV Trigger: CACTTGCTGTATAGCATAGAGTAGCCTGGAGTTTCTGATCCTCCAGCTGGGATTCCAGGTGTGCAGTGCCACCTTGAGCCTATGTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 90 bp | TTTTTCAAGCAAAGATTCCATCAGGCCTTGGTCACATCTGGACCCTaGTCACAAGTACCTGCAGTAGAGGAGAGCTTCAGAGACCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: FFKQRFHQALVTSGP*SQVPAVEESFRDQE Trigger: CTCTTGGTCTCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCCAGATGTGACCAAGGCCTGATGGAATCTTTGCTTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR TCA 90 bp | CCATGGCAGTATGTCACAAAACAGTATTTATCACACAAGTGCCAGTaGGAAAGGGACAGTAGGACTAGACAGTCATCTGTGGACCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: PWQYVTKQYLSHKCQ*ERDSRTRQSSVDLG Trigger: CCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCTTTCTCACTGGCACTTGTGTGATAAATACTGTTTTGTGACATACTGCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR TCA 90 bp | GGGTCTGAGTTCAAGTCCAGTGTAGACTACAGAGTTAAAACAGCCTaGGAAGGAATCTGCCCCAGGACACAGCTAATAATCAAATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GSEFKSSVDYRVKTA*EGICPRTQLIIKCC Trigger: GCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATTCCTTCTCAGGCTGTTTTAACTCTGTAGTCTACACTGGACTTGAACTCAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTGCCCCTCTAGCCTCCGCAGCAGAGATGTGAGGAGACAGGCTCTCTCCATTACCAAACAGTCCTTGTaGTGGGGAAGCAGCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VCPSSLRSRDVRRQALSITKQSL*WGSSSP Trigger: AGGGGAGCTGCTTCCCCATCACAAGGACTGTTTGGT...AATGGAGAGAGCCTGTCTCCTCACATCTCTGCTGCGGAGGCTAGAGGGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGACAGTAGGACTAGACAGTCATCTGTGGACCTGGGGCTGCCCTCATGGTCAAGTGAGAAGCCAGCCTaGATCCATGACACTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RDSRTRQSSVDLGLPSWSSEKPA*IHDTLE Trigger: CTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACT...TGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTTTCACAGGGTCTTCAGGCTaGGCAGTCACTGTGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SWSHQAWLWRTLKLLSTFTGSSG*AVTVSS Trigger: GGAGCTCACAGTGACTGCCCAGCCTGAAGACCCTGT...GAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGACAGTAGGACTAGACAGTCATCTGTGGACCTGGGGCTGCCCTCATGGTCATCTCTAAATGGACCTTaGGGTGAGGCAGGACATGCT | + |
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Preference number: 2 (lower is better) Translates to: RDSRTRQSSVDLGLPSWSSLNGP*GEAGHA Trigger: AGCATGTCCTGCCTCACCCCAAGGTCCATTTAGAGA...TGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CAA 90 bp | GAGGGAGAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTaGGCTCTGGAGAACACTCAAACTGCTCTCTACTTTCCCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: EGEDKHLSLLLVPPS*ALENTQTALYFPKS Trigger: AGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR-3UTR CCA 90 bp | GGACCCTGGTCACAAGTACCTGCAGTAGAGGAGAGCTTCAGAGACCAAGAGCTAAGACAGGGAGGGGTTTaGCTCATTTGGAAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GPWSQVPAVEESFRDQELRQGGV*LIWKAL Trigger: CAGAGCCTTCCAAATGAGCCAAACCCCTCCCTGTCT...TAGCTCTTGGTCTCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTGAGAAGCCAGCCTGGATCCATGACACTCTGGAGACGATTCAGGGTGGCGGAGAACACTCAAACTaGTCTCTACTTTCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASEKPAWIHDTLETIQGGGEHSN*SLLSQV Trigger: GACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCC...GCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGACAGTAGGACTAGACAGTCATCTGTGGACCTGGGGCTGCCCTCATGGTCACATGCTATCCCAGATTaGCAATTCAGTGACCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: RDSRTRQSSVDLGLPSWSHAIPD*QFSDLR Trigger: TCTAAGGTCACTGAATTGTCAATCTGGGATAGCATG...TGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGGGGTGAGGCAGGACATGCTATCCCAGATTGACAATTCAGTGACCTTAGGATCCATGACACTCTaGAGACGATTCAGGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DLGVRQDMLSQIDNSVTLGSMTL*RRFRVA Trigger: AGCCACCCTGAATCGTCTCCAGAGTGTCATGGATCC...TAAGGTCACTGAATTGTCAATCTGGGATAGCATGTCCTGCCTCACCCCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAAGGAATCTGCCCCAGGACACAGCTAATAATCAAATGCTGCATGCTGTCTCATTTGGAAGGCTCTaGCTACCAGACTCTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LRRNLPQDTANNQMLHAVSFGRL*LPDSGS Trigger: ACTGCCAGAGTCTGGTAGGCAGAGCCTTCCAAATGA...GACAGCATGCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATTCCTTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CAA 90 bp | TTTACCTTGAGAGTAGGCACAGCGCCTACCTTAAAAACAAAGCTGTaGTTGCTGCTGCTGCTGCTAGTGGCACACACTTTAATCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FTLRVGTAPTLKTKL*LLLLLLVAHTLILA Trigger: TGCCAGGATTAAAGTGTGTGCCACTAGCAGCAGCAGCAGCAACAACAGCTTTGTTTTTAAGGTAGGCGCTGTGCCTACTCTCAAGGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | AGTCCTTGTGATGGGGAAGCAGCTCCCCTGGGAGAATaGCTCCCTGGTGTGCACGAGTCCTGGGACCCATCC | + |
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Preference number: 3 (lower is better) Translates to: SPCDGEAAPLGE*LPGVHESWDPS Trigger: GGATGGGTCCCAGGACTCGTGCACACCAGGGAGGCATTCTCCCAGGGGAGCTGCTTCCCCATCACAAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | ACAGTAGGACTAGACAGTCATCTGTGGACCTGGGGCTaGCCTCATGGTCAGCTGAGGCAGCAGCAGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TVGLDSHLWTWG*PHGQLRQQQPQ Trigger: CTGGGGCTGCTGCTGCCTCAGCTGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | CACCAAACAGTCCTTGTGATGGGGAAGCAGCTCCCCTaGGAGAATGCCTCCCTGGTGTGCACGAGTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HQTVLVMGKQLP*ENASLVCTSPG Trigger: CCCAGGACTCGTGCACACCAGGGAGGCATTCTCCCAGGGGAGCTGCTTCCCCATCACAAGGACTGTTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | CTAGACAGGGAGGGGTTTGGCTCATTTGGAAGGCTCTaGCTACCAGACTCTGGCAGTAAGGGTGCTGCTCGG | + |
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Preference number: 3 (lower is better) Translates to: LDREGFGSFGRL*LPDSGSKGAAR Trigger: CCGAGCAGCACCCTTACTGCCAGAGTCTGGTAGGCAGAGCCTTCCAAATGAGCCAAACCCCTCCCTGTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | AAAGGGACAGTAGGACTAGACAGTCATCTGTGGACCTaGGGCTGCCCTCATGGTCAGCTGAGGCAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KGTVGLDSHLWT*GCPHGQLRQQQ Trigger: CTGCTGCTGCCTCAGCTGACCATGAGGGCAGCCCCAGGTCCACAGATGACTGTCTAGTCCTACTGTCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGCCAGCCTGGATCCATGACACTCTGGAGACGATTCAGGGTGGCTCCAGACTGGTCCCACCAAGCTaGGCTCTGGAGAACACTCAA | + |
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Preference number: 3 (lower is better) Translates to: EKPAWIHDTLETIQGGSRLVPPS*ALENTQ Trigger: TTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAG...TCTGGAGCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR CCA 72 bp | CTGGGGAGGGAGAGGACAAGCACTTGTCACTGCTCCTaGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LGRERTSTCHCS*SHQAWLWRTLK Trigger: TTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTCCCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR CCA 72 bp | CAGCAAGTGAGAAGCCAGCCTGGATCCATGACACTCTaGAGACGATTCAGGGTGGCTCCAGACCAGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: QQVRSQPGSMTL*RRFRVAPDQRS Trigger: GCTTCTCTGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | CCCATCCCTACCTTCCACATAGGCTCAAGGTGGCACTaGACACCTGGAATCCCAGCTGGAGGATCAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: PIPTFHIGSRWH*TPGIPAGGSET Trigger: AGTTTCTGATCCTCCAGCTGGGATTCCAGGTGTGCAGTGCCACCTTGAGCCTATGTGGAAGGTAGGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | GGAATCTGCCCCAGGACACAGCTAATAATCAAATGCTaGATGCTGTCTGCCCCTCTAGCCTCCGCAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: GICPRTQLIIKC*MLSAPLASAAE Trigger: CTCTGCTGCGGAGGCTAGAGGGGCAGACAGCATGCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | GGCCTTGGTCACATCTGGACCCTGGTCACAAGTACCTaGAGTAGAGGAGAGCTTCAGAGACCAAGAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: GLGHIWTLVTST*SRGELQRPRAT Trigger: GGTAGCTCTTGGTCTCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCCAGATGTGACCAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | GAAGGAATCTGCCCCAGGACACAGCTAATAATCAAATaGTGCATGCTGTCTGCCCCTCTAGCCTCCGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: EGICPRTQLIIK*CMLSAPLASAA Trigger: TGCTGCGGAGGCTAGAGGGGCAGACAGCATGCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | GGAGAACACTCAAACTGCTCTCTACTTTCCCAAGTCTaGACAGGGTCTTCAGGCTGGGCAGTCACTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: GEHSNCSLLSQV*TGSSGWAVTVS Trigger: GCTCACAGTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR CCA 72 bp | TACCTTCCACATAGGCTCAAGGTGGCACTGCACACCTaGAATCCCAGCTGGAGGATCAGAAACTCCAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: YLPHRLKVALHT*NPSWRIRNSRL Trigger: TAGCCTGGAGTTTCTGATCCTCCAGCTGGGATTCCAGGTGTGCAGTGCCACCTTGAGCCTATGTGGAAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | GGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTaGTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GPTKLGSGEHSN*SLLSQVWTGSS Trigger: TGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR GCA 72 bp | CAGGACACAGCTAATAATCAAATGCTGCATGCTGTCTaGCCCTCTAGCCTCCGCAGCAGAGATGTGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QDTANNQMLHAV*PSSLRSRDVRR Trigger: TCTCCTCACATCTCTGCTGCGGAGGCTAGAGGGGCAGACAGCATGCAGCATTTGATTATTAGCTGTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | GCTACTCTATGCTATACAGCAAGTGAGAAGCCAGCCTaGATCCATGACACTCTGGAGACGATTCAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ATLCYTASEKPA*IHDTLETIQGG Trigger: GCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGCTGTATAGCATAGAGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | AGGCTCAAGGTGGCACTGCACACCTGGAATCCCAGCTaGAGGATCAGAAACTCCAGGCTACTCTATGCTATA | + |
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Preference number: 3 (lower is better) Translates to: RLKVALHTWNPS*RIRNSRLLYAI Trigger: TATAGCATAGAGTAGCCTGGAGTTTCTGATCCTCCAGCTGGGATTCCAGGTGTGCAGTGCCACCTTGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR-3UTR CAA 90 bp | CTGAGAAGGAATCTGCCCCAGGACACAGCTAATAATCAAATGCTGCATGCTGTCAGGGGTTTGGCTCATTaGGAAGGCTCTGCCTACCAG | + |
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Preference number: 3 (lower is better) Translates to: LRRNLPQDTANNQMLHAVRGLAH*EGSAYQ Trigger: CTGGTAGGCAGAGCCTTCCAAATGAGCCAAACCCCT...GACAGCATGCAGCATTTGATTATTAGCTGTGTCCTGGGGCAGATTCCTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR TCA 72 bp | GGCTTGGGAGAGGTCATCTCTAAATGGACCTTGGGGTaGGGCAGGACATGCTATCCCAGATTGACAATTCAG | + |
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Preference number: 3 (lower is better) Translates to: GLGEVISKWTLG*GRTCYPRLTIQ Trigger: CTGAATTGTCAATCTGGGATAGCATGTCCTGCCTCACCCCAAGGTCCATTTAGAGATGACCTCTCCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR GCA 72 bp | TCCCAGCTGGAGGATCAGAAACTCCAGGCTACTCTATaGTATACAGCAAGTGAGAAGCCAGCCTGGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: SQLEDQKLQATL*YTASEKPAWIH Trigger: ATGGATCCAGGCTGGCTTCTCACTTGCTGTATAGCATAGAGTAGCCTGGAGTTTCTGATCCTCCAGCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| 3UTR CCA 72 bp | ACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTaGAGAACACTCAAACTGCTCTCTACTTTCCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TCHCSWSHQAWL*RTLKLLSTFPS Trigger: ACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| 3UTR CCA 72 bp | ACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTaGCTCTGGAGAACACTCAAACTGCTCTCTACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TSTCHCSWSHQA*LWRTLKLLSTF Trigger: GAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| 3UTR CCA 72 bp | CAAAGATTCCATCAGGCCTTGGTCACATCTGGACCCTaGTCACAAGTACCTGCAGTAGAGGAGAGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QRFHQALVTSGP*SQVPAVEESFR Trigger: TCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCCAGATGTGACCAAGGCCTGATGGAATCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| 3UTR TCA 72 bp | TTCAAGTCCAGTGTAGACTACAGAGTTAAAACAGCCTaGGAAGGAATCTGCCCCAGGACACAGCTAATAATC | + |
|
Preference number: 3 (lower is better) Translates to: FKSSVDYRVKTA*EGICPRTQLII Trigger: GATTATTAGCTGTGTCCTGGGGCAGATTCCTTCTCAGGCTGTTTTAACTCTGTAGTCTACACTGGACTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| 3UTR CCA 72 bp | CAGCTAAATCTCACATGTAAAGGCCCAGGCAGGCCATaGCAGTATGTCACAAAACAGTATTTATCACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLNLTCKGPGRP*QYVTKQYLSHK Trigger: CTTGTGTGATAAATACTGTTTTGTGACATACTGCCATGGCCTGCCTGGGCCTTTACATGTGAGATTTAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| 3UTR GCA 72 bp | GTGATGTCAGCTAATGAAAAGGGGAGGTTCCTGCTCTaGCACCAGTATTTATTAAATGTATTCTGCGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: VMSANEKGRFLL*HQYLLNVFCVT Trigger: AGTGACGCAGAATACATTTAATAAATACTGGTGGCAGAGCAGGAACCTCCCCTTTTCATTAGCTGACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| 3UTR TCA 72 bp | TATGTCACAAAACAGTATTTATCACACAAGTGCCAGTaGGAAAGGGACAGTAGGACTAGACAGTCATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YVTKQYLSHKCQ*ERDSRTRQSSV Trigger: CACAGATGACTGTCTAGTCCTACTGTCCCTTTCTCACTGGCACTTGTGTGATAAATACTGTTTTGTGACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CCA 90 bp | AAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTCACCAGCCTCGGCGGAACTaGGTCCTGTGGGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTFPSLDRVFRLGSHQPRRN*VLWGMC Trigger: ACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTG...GTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTACTGCCACGGGGGTATaGGCACGGTGTCCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLLSTFPSLDRVFRLGSTATGV*ARCPPS Trigger: AGATGGTGGACACCGTGCGCATACCCCCGTGGCAGT...ACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | AAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTCACACTGCCACGGGGGTATaGGCACGGTGTCCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTFPSLDRVFRLGSHTATGV*ARCPPS Trigger: AGATGGTGGACACCGTGCGCATACCCCCGTGGCAGT...GTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGGATCCATGACACTCTGGAGACGATTCAGGGTGGCTCCAGACCAGAGCAGCAATGGAATCGTTaGGTTTCCGCTCAAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAWIHDTLETIQGGSRPEQQWNR*VSAQTA Trigger: GGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTG...CTCTGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR TCA 90 bp | ACACTCTGGAGACGATTCAGGGTGGCTCCAGACCAGAGAAGCAGTGCTGGGGAGCGTCCTCCAGCTTGGTaGTATCAAACAGACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLWRRFRVAPDQRSSAGERPPAW*YQTDRC Trigger: GCATCTGTCTGTTTGATATCACCAAGCTGGAGGACG...CTCCCCAGCACTGCTTCTCTGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAAGCGGAAATGGACTTTaGTGTGGGATGCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERTSTCHCSWSHQAWLWRSGNGL*CGMLHP Trigger: GGGATGGAGCATCCCACACCAAAGTCCATTTCCGCT...TCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CCA 90 bp | GAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACATGGTGCTTCCTTCTTaGGCAGCTCCTCGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EDKHLSLLLVPPSLALENMVLPS*AAPRLK Trigger: CTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCAT...GTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTTCCATGTACAGGTCATaGGCTCCTTCCTCCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKLLSTFPSLDRVFRLGSSMYRS*APSSVS Trigger: CGAGACGGAGGAAGGAGCGCATGACCTGTACATGGA...ACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTTCCATGTACAGGTCATaGGCTCCTTCCTCCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLSLLLVPPSLALENTQTSMYRS*APSSVS Trigger: CGAGACGGAGGAAGGAGCGCATGACCTGTACATGGA...AGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCTAGTGGCACACACTTTAATCCTGGCAGAGGCAGATGGGTCTGAGAAATGGACTTTGGTGTaGGATGCTCCATCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLVAHTLILAEADGSEKWTLV*DAPSPG Trigger: CCCAGGGGATGGAGCATCCCACACCAAAGTCCATTT...CTCAGACCCATCTGCCTCTGCCAGGATTAAAGTGTGTGCCACTAGCAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CCA 90 bp | AACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTCACTGACGTGCACACCCTCTaGGCTGCAGCCTTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCSLLSQVWTGSSGWAVTDVHTL*AAAFDL Trigger: AAGATCAAAGGCTGCAGCCCAGAGGGTGTGCACGTC...AGTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR TCA 90 bp | AGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACGTCCTCCAGCTTGGTaGTATCAAACAGACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSTCHCSWSHQAWLWRTRPPAW*YQTDRC Trigger: GCATCTGTCTGTTTGATATCACCAAGCTGGAGGACG...TGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCCCACACCCACACTTaGTCCGCTTCATCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHCSWSHQAWLWRTLKLLSHTHT*SASSNL Trigger: CAAGTTTGATGAAGCGGAGCAAGTGTGGGTGTGGGA...GAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTCCGCTTCATCAAACTTaGCAGGCTGCTGCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CSWSHQAWLWRTLKLLSTPLHQT*QAAAVT Trigger: AGTCACTGCAGCAGCCTGCCAAGTTTGATGAAGCGG...AGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGAAATTACAAAAACCACCAAACAGTCCTTGTGATGGGGAAGCAGCTCCCCAGCCTCGGCGGAACTaGGTCCTGTGGGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKKLQKPPNSPCDGEAAPQPRRN*VLWGMC Trigger: ACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTG...GGGAGCTGCTTCCCCATCACAAGGACTGTTTGGTGGTTTTTGTAATTTCTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CCA 90 bp | AACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTCACTATGGTGCTTCCTTCTTaGGCAGCTCCTCGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NCSLLSQVWTGSSGWAVTMVLPS*AAPRLK Trigger: CTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCAT...AGTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTAAAGAGACTTTGGTGTaGGATGCTCCATCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLLSTFPSLDRVFRLGSKETLV*DAPSPG Trigger: CCCAGGGGATGGAGCATCCCACACCAAAGTCTCTTT...ACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230050.2 |
||
| CDS-3UTR TCA 90 bp | AAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTCACCAGCAATGGAATCGTTaGGTTTCCGCTCAAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTFPSLDRVFRLGSHQQWNR*VSAQTA Trigger: GGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTG...GTGACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTACCCTAAAGAGACTTTaGTGTGGGATGCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSWSHQAWLWRTLKLLSTTLKRL*CGMLHP Trigger: GGGATGGAGCATCCCACACCAAAGTCTCTTTAGGGT...AGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | TGCTATACAGCAAGTGAGAAGCCAGCCTGGATCCATGACACTCTGGAGACGATTCCGCTTCATCAAACTTaGCAGGCTGCTGCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CYTASEKPAWIHDTLETIPLHQT*QAAAVT Trigger: AGTCACTGCAGCAGCCTGCCAAGTTTGATGAAGCGG...AATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGCTGTATAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| 3UTR CAA 72 bp | GACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTaGGCTCTGGAGAACACTCAAACTGCTCTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: DKHLSLLLVPPS*ALENTQTALYF Trigger: AAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGATGTATACGACCTTGTTaGCCAATTTCTTGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTSTCHCSWSHQAWLWRCIRPC*PISCSA Trigger: AGCTGAACAAGAAATTGGCCAACAAGGTCGTATACA...TCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | AGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACATATCAAACAGACAGATaGAGAGTCCCACGTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RTSTCHCSWSHQAWLWRTYQTDR*RVPRCI Trigger: TATACAACGTGGGACTCTGCATCTGTCTGTTTGATA...TGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| 3UTR CAA 72 bp | AGAGTAGGCACAGCGCCTACCTTAAAAACAAAGCTGTaGTTGCTGCTGCTGCTGCTAGTGGCACACACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RVGTAPTLKTKL*LLLLLLVAHTL Trigger: TAAAGTGTGTGCCACTAGCAGCAGCAGCAGCAACAACAGCTTTGTTTTTAAGGTAGGCGCTGTGCCTACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTTTCTGTATACGACCTTGTTaGCCAATTTCTTGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWSHQAWLWRTLKLLSTFCIRPC*PISCSA Trigger: AGCTGAACAAGAAATTGGCCAACAAGGTCGTATACA...GAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTTTCCCAAGTCTGGATATCAAACAGACAGATaGAGAGTCCCACGTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PSLALENTQTALYFPKSGYQTDR*RVPRCI Trigger: TATACAACGTGGGACTCTGCATCTGTCTGTTTGATA...TCCAGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CAA 90 bp | GACACTCTGGAGACGATTCAGGGTGGCTCCAGACCAGAGAAGCAGTGCTGGGGATGGGCAGCTCCTCGCTaGAAGAGGCAGCCTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTLETIQGGSRPEKQCWGWAAPR*KRQPRR Trigger: CCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCA...TCCCCAGCACTGCTTCTCTGGTCTGGAGCCACCCTGAATCGTCTCCAGAGTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS CCA 90 bp | CCTTCTTGGGCAGCTCCTCGCTTGAAGAGGCAGCCTCGGCGGAACTaGGTCCTGTGGGGGATGTGTCCACAAAGCTCTCATCCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PSWAAPRLKRQPRRN*VLWGMCPQSSHPPP Trigger: GGGTGGTGGATGAGAGCTTTGTGGACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS GCA 90 bp | ACCACCCTGAAGCGGATCTCCTCCCCAGTGTCCATGTACAGGTCATaGGCTCCTTCCTCCGTCTCGTACTCCCACACCCACACTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLKRISSPVSMYRS*APSSVSYSHTHTCS Trigger: GGAGCAAGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCGCATGACCTGTACATGGACACTGGGGAGGAGATCCGCTTCAGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGCAGTTGGGCAGCTCCTCGCTaGAAGAGGCAGCCTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKLLSTFPSLDRVFRLGSWAAPR*KRQPRR Trigger: CCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCA...ACTGCCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS TCA 90 bp | TCCCACAAGTGTATATGGTGCTTCCTTCTTGGGCAGCTCCTCGCTTaGAGAGGCAGCCTCGGCGGAACTGGGTCCTGTGGGGGATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SHKCIWCFLLGQLLA*RGSLGGTGSCGGCV Trigger: GACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATATACACTTGTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGGAGAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGTATGGTGCTTCCTTCTaGGGCAGCTCCTCGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGRERTSTCHCSWSHQAWYGASF*GSSSLE Trigger: TTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATA...CCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTCCCTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS GCA 90 bp | TTGTTCAGCTCCTCAGCAATGGAATCGTTGAGTTTCCGCTCAAACTaGCACGGGGGTATGCGCACGGTGTCCACCATCTCCACCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LFSSSAMESLSFRSN*HGGMRTVSTISTST Trigger: CGTGCTGGTGGAGATGGTGGACACCGTGCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGAGCTGAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS GCA 90 bp | GAAGGGGTGAAACACCACGTAGCGGAAATGGACTTTGGTGTGGGATaGTCCATCCCCTGGGAACACATAGGCGTCCTCCAGCTTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EGVKHHVAEMDFGVG*SIPWEHIGVLQLGD Trigger: ATCACCAAGCTGGAGGACGCCTATGTGTTCCCAGGGGATGGAGCATCCCACACCAAAGTCCATTTCCGCTACGTGGTGTTTCACCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS CCA 90 bp | TCTCATCCAGGAAGGGGTGAAACACCACGTAGCGGAAATGGACTTTaGTGTGGGATGCTCCATCCCCTGGGAACACATAGGCGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPGRGETPRSGNGL*CGMLHPLGTHRRPP Trigger: TGGAGGACGCCTATGTGTTCCCAGGGGATGGAGCATCCCACACCAAAGTCCATTTCCGCTACGTGGTGTTTCACCCCTTCCTGGATGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CAA 90 bp | GAGAGGACAAGCACTTGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGATCTGGGCTGCAGCCTTaGATCTTCCCAATGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ERTSTCHCSWSHQAWLWRSGLQP*IFPMRI Trigger: GATCCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...TCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACAAGTGCTTGTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
||
| CDS-3UTR CAA 90 bp | TCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTCCGCTTCATCAAACTaGGCAGGCTGCTGCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLVPPSLALENTQTALSASSN*AGCCSD Trigger: GTCACTGCAGCAGCCTGCCAAGTTTGATGAAGCGGA...GAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS TCA 90 bp | CCTTGTTGGCCAATTTCTTGTTCAGCTCCTCAGCAATGGAATCGTTaGGTTTCCGCTCAAACTGCCACGGGGGTATGCGCACGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCWPISCSAPQQWNR*VSAQTATGVCARCP Trigger: TGGACACCGTGCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGAGCTGAACAAGAAATTGGCCAACAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
||
| CDS TCA 90 bp | GGGATGCTCCATCCCCTGGGAACACATAGGCGTCCTCCAGCTTGGTaGTATCAAACAGACAGATGCAGAGTCCCACGTTGTATACGACCT | + |
|
Preference number: 5 (lower is better) Translates to: GMLHPLGTHRRPPAW*YQTDRCRVPRCIRP Trigger: AGGTCGTATACAACGTGGGACTCTGCATCTGTCTGTTTGATATCACCAAGCTGGAGGACGCCTATGTGTTCCCAGGGGATGGAGCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CCA 90 bp | CACCACGTAGCGGAAATGGACTTTGGTGTGGGATGCTCCATCCCCTaGGAACACATAGGCGTCCTCCAGCTTGGTGATATCAAACAGACA | + |
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Preference number: 5 (lower is better) Translates to: HHVAEMDFGVGCSIP*EHIGVLQLGDIKQT Trigger: TGTCTGTTTGATATCACCAAGCTGGAGGACGCCTATGTGTTCCCAGGGGATGGAGCATCCCACACCAAAGTCCATTTCCGCTACGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS-3UTR CAA 90 bp | TCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTCTACTTTCTCCGCTTCATCAAACTaGGCAGGCTGCTGCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: SWSHQAWLWRTLKLLSTFSASSN*AGCCSD Trigger: GTCACTGCAGCAGCCTGCCAAGTTTGATGAAGCGGA...GAAAGTAGAGAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS-3UTR CAA 90 bp | AACACTCAAACTGCTCTCTACTTTCCCAAGTCTGGACAGGGTCTTCAGGCTGGGTATGGTGCTTCCTTCTaGGGCAGCTCCTCGCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: NTQTALYFPKSGQGLQAGYGASF*GSSSLE Trigger: TTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATA...CCCAGCCTGAAGACCCTGTCCAGACTTGGGAAAGTAGAGAGCAGTTTGAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS-3UTR CAA 90 bp | TGTCACTGCTCCTGGTCCCACCAAGCTTGGCTCTGGAGAACACTCAAACTGCTCTTGTTGGCCAATTTCTaGTTCAGCTCCTCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: CHCSWSHQAWLWRTLKLLLLANF*FSSSAM Trigger: CATTGCTGAGGAGCTGAACAAGAAATTGGCCAACAA...GAGCAGTTTGAGTGTTCTCCAGAGCCAAGCTTGGTGGGACCAGGAGCAGTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS-3UTR CAA 90 bp | GCAAGTGAGAAGCCAGCCTGGATCCATGACACTCTGGAGACGATTCAGGGTGGCTTGTATACGACCTTGTaGGCCAATTTCTTGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASEKPAWIHDTLETIQGGLYTTL*ANFLFS Trigger: GCTGAACAAGAAATTGGCCAACAAGGTCGTATACAA...GCCACCCTGAATCGTCTCCAGAGTGTCATGGATCCAGGCTGGCTTCTCACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS-3UTR CAA 90 bp | GGACCCTGGTCACAAGTACCTGCAGTAGAGGAGAGCTTCAGAGACCAAGAGCTATTGTTGGCCAATTTCTaGTTCAGCTCCTCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: GPWSQVPAVEESFRDQELLLANF*FSSSAM Trigger: CATTGCTGAGGAGCTGAACAAGAAATTGGCCAACAA...TAGCTCTTGGTCTCTGAAGCTCTCCTCTACTGCAGGTACTTGTGACCAGGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCCATGGCAGTATGTCACAAAACAGTATTTATCACACAAGTGCCAGTGATGCAGAGTCCCACGTaGTATACGACCTTGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RQAMAVCHKTVFITQVPVMQSPT*YTTLLA Trigger: GGCCAACAAGGTCGTATACAACGTGGGACTCTGCAT...CACTGGCACTTGTGTGATAAATACTGTTTTGTGACATACTGCCATGGCCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS-3UTR CAA 90 bp | GACCTTGGGGTGAGGCAGGACATGCTATCCCAGATTGACAATTCAGTGACCTTATTGTATACGACCTTGTaGGCCAATTTCTTGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: DLGVRQDMLSQIDNSVTLLYTTL*ANFLFS Trigger: GCTGAACAAGAAATTGGCCAACAAGGTCGTATACAA...TAAGGTCACTGAATTGTCAATCTGGGATAGCATGTCCTGCCTCACCCCAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS CCA 72 bp | CGCTTGAAGAGGCAGCCTCGGCGGAACTGGGTCCTGTaGGGGATGTGTCCACAAAGCTCTCATCCACCACCC | + |
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Preference number: 6 (lower is better) Translates to: RLKRQPRRNWVL*GMCPQSSHPPP Trigger: GGGTGGTGGATGAGAGCTTTGTGGACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CCA 72 bp | GCAGCTCCTCGCTTGAAGAGGCAGCCTCGGCGGAACTaGGTCCTGTGGGGGATGTGTCCACAAAGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: AAPRLKRQPRRN*VLWGMCPQSSH Trigger: ATGAGAGCTTTGTGGACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS TCA 72 bp | TGTATATGGTGCTTCCTTCTTGGGCAGCTCCTCGCTTaGAGAGGCAGCCTCGGCGGAACTGGGTCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CIWCFLLGQLLA*RGSLGGTGSCG Trigger: CCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS GCA 72 bp | AAGCGGATCTCCTCCCCAGTGTCCATGTACAGGTCATaGGCTCCTTCCTCCGTCTCGTACTCCCACACCCAC | + |
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Preference number: 6 (lower is better) Translates to: KRISSPVSMYRS*APSSVSYSHTH Trigger: GTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCGCATGACCTGTACATGGACACTGGGGAGGAGATCCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CAA 90 bp | ATCCCACAAGTGTATATGGTGCTTCCTTCTTGGGCAGCTCCTCGCTaGAAGAGGCAGCCTCGGCGGAACTGGGTCCTGTGGGGGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: IPQVYMVLPSWAAPR*KRQPRRNWVLWGMC Trigger: ACACATCCCCCACAGGACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATATACACTTGTGGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS GCA 72 bp | GCTCCTTCCTCCGTCTCGTACTCCCACACCCACACTTaGTCCGCTTCATCAAACTTGGCAGGCTGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: APSSVSYSHTHT*SASSNLAGCCS Trigger: ACTGCAGCAGCCTGCCAAGTTTGATGAAGCGGAGCAAGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CAA 90 bp | CCTGGCTCACTGATAGATCCCACAAGTGTATATGGTGCTTCCTTCTaGGGCAGCTCCTCGCTTGAAGAGGCAGCCTCGGCGGAACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PGSLIDPTSVYGASF*GSSSLEEAASAELG Trigger: ACCCAGTTCCGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATATACACTTGTGGGATCTATCAGTGAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS GCA 72 bp | TCCTCAGCAATGGAATCGTTGAGTTTCCGCTCAAACTaGCACGGGGGTATGCGCACGGTGTCCACCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSAMESLSFRSN*HGGMRTVSTIS Trigger: GGAGATGGTGGACACCGTGCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CCA 72 bp | GCGGAAATGGACTTTGGTGTGGGATGCTCCATCCCCTaGGAACACATAGGCGTCCTCCAGCTTGGTGATATC | + |
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Preference number: 6 (lower is better) Translates to: AEMDFGVGCSIP*EHIGVLQLGDI Trigger: GATATCACCAAGCTGGAGGACGCCTATGTGTTCCCAGGGGATGGAGCATCCCACACCAAAGTCCATTTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS CCA 72 bp | GGAAGGGGTGAAACACCACGTAGCGGAAATGGACTTTaGTGTGGGATGCTCCATCCCCTGGGAACACATAGG | + |
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Preference number: 6 (lower is better) Translates to: GRGETPRSGNGL*CGMLHPLGTHR Trigger: CCTATGTGTTCCCAGGGGATGGAGCATCCCACACCAAAGTCCATTTCCGCTACGTGGTGTTTCACCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023113.7 |
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| CDS CAA 72 bp | CTGATAGATCCCACAAGTGTATATGGTGCTTCCTTCTaGGGCAGCTCCTCGCTTGAAGAGGCAGCCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LIDPTSVYGASF*GSSSLEEAASA Trigger: CGCCGAGGCTGCCTCTTCAAGCGAGGAGCTGCCCAAGAAGGAAGCACCATATACACTTGTGGGATCTATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CAA 90 bp | ACCTTGTTGGCCAATTTCTTGTTCAGCTCCTCAGCAATGGAATCGTaGAGTTTCCGCTCAAACTGCCACGGGGGTATGCGCACGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TLLANFLFSSSAMES*SFRSNCHGGMRTVS Trigger: GGACACCGTGCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGAGCTGAACAAGAAATTGGCCAACAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS TCA 72 bp | CATCCCCTGGGAACACATAGGCGTCCTCCAGCTTGGTaGTATCAAACAGACAGATGCAGAGTCCCACGTTGT | + |
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Preference number: 6 (lower is better) Translates to: HPLGTHRRPPAW*YQTDRCRVPRC Trigger: ACAACGTGGGACTCTGCATCTGTCTGTTTGATATCACCAAGCTGGAGGACGCCTATGTGTTCCCAGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CAA 72 bp | GCCAATTTCTTGTTCAGCTCCTCAGCAATGGAATCGTaGAGTTTCCGCTCAAACTGCCACGGGGGTATGCGC | + |
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Preference number: 6 (lower is better) Translates to: ANFLFSSSAMES*SFRSNCHGGMR Trigger: GCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGAGCTGAACAAGAAATTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS TCA 72 bp | CCAATTTCTTGTTCAGCTCCTCAGCAATGGAATCGTTaGGTTTCCGCTCAAACTGCCACGGGGGTATGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PISCSAPQQWNR*VSAQTATGVCA Trigger: TGCGCATACCCCCGTGGCAGTTTGAGCGGAAACTCAACGATTCCATTGCTGAGGAGCTGAACAAGAAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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| CDS CAA 72 bp | AGTCCCACGTTGTATACGACCTTGTTGGCCAATTTCTaGTTCAGCTCCTCAGCAATGGAATCGTTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPTLYTTLLANF*FSSSAMESLSF Trigger: GAAACTCAACGATTCCATTGCTGAGGAGCTGAACAAGAAATTGGCCAACAAGGTCGTATACAACGTGGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023113.7 ENSMUST00000230050.2 |
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