RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR3E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030880

Ensembl transcript IDs: ENSMUST00000033173.15, ENSMUST00000106483.4, ENSMUST00000207481.2

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTTGGTGTTCACTTCCCATCCTTCTTTCCTTCCGCTTCCGTGTCTaGAGCACAGCTAAGGCCACTCAGTCCCTATGTGTGTGGTGGCCT +
Preference number: 1 (lower is better)
Translates to: SWCSLPILLSFRFRV*STAKATQSLCVWWP
Trigger: AGGCCACCACACACATAGGGACTGAGTGGCCTTAGCTGTGCTGCAGACACGGAAGCGGAAGGAAAGAAGGATGGGAAGTGAACACCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR CCA 90 bp ACAGAAGGAGTTTGCTGCGCTAGCTCACTTCCCTTCTTAAGAAGTTaGTGTTCACTTCCCATCCTTCTTTCCTTCCGCTTCCGTGTCTGC +
Preference number: 1 (lower is better)
Translates to: TEGVCCASSLPFLRS*CSLPILLSFRFRVC
Trigger: GCAGACACGGAAGCGGAAGGAAAGAAGGATGGGAAGTGAACACCAACTTCTTAAGAAGGGAAGTGAGCTAGCGCAGCAAACTCCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR-3UTR GCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACTACGTGTGGCTCTaGCATCCTTCCCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LYCKEGPLVSAGSALTYADYVWL*HPSLGL
Trigger: CAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTC...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
3UTR-3UTR CCA 90 bp GCACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCAGCCCCTCTGTCCTCTaGGCCAGGCAGCGCCACAGG +
Preference number: 2 (lower is better)
Translates to: ALNALEAQRTFSTERFGSSPSVL*ARQRHR
Trigger: CCTGTGGCGCTGCCTGGCCCAGAGGACAGAGGGGCT...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR-3UTR GCA 90 bp ACTTCCCTTCTTAAGAAGTTGGTGTTCACTTCCCATCCTTCTTTCCTTCCGCTTAGGCCCGCTGGTCTCTaGTGGGAGCGCTCTCACTTA +
Preference number: 2 (lower is better)
Translates to: TSLLKKLVFTSHPSFLPLRPAGL*WERSHL
Trigger: TAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCT...AAGCGGAAGGAAAGAAGGATGGGAAGTGAACACCAACTTCTTAAGAAGGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR CAA 90 bp ATGACCCGGTGTGATGGCCCCCTTCTCTCTTTAGCACTGAACGCTTaGGAAGCACAGAGCACATTTAGTACTGAACGCTTTGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: MTRCDGPLLSLALNA*EAQSTFSTERFGST
Trigger: TGTGCTTCCAAAGCGTTCAGTACTAAATGTGCTCTGTGCTTCCAAAGCGTTCAGTGCTAAAGAGAGAAGGGGGCCATCACACCGGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR-3UTR CCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTAGCCCCTCTGTCCTCTaGGCCAGGCAGCGCCACAGG +
Preference number: 2 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSSPSVL*ARQRHR
Trigger: CCTGTGGCGCTGCCTGGCCCAGAGGACAGAGGGGCT...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR-3UTR GCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATGACTACGTGTGGCTCTaGCATCCTTCCCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNDYVWL*HPSLGL
Trigger: CAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTC...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR-3UTR GCA 90 bp ACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGAATTTCAAATTGTACTaGAAAGAAGGCCCGCTGGTC +
Preference number: 2 (lower is better)
Translates to: TLWKHRGHLVLNALEAQRNFKLY*KEGPLV
Trigger: GACCAGCGGGCCTTCTTTGCAGTACAATTTGAAATT...CCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR-3UTR CCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAAAGTCAAGACTACGTGTaGCTCTGCCATCCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: RNPAHVSVHSLYYENETQSQDYV*LCHPSL
Trigger: CAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACT...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR CAA 90 bp GAAGATGGAGTTAATCTAATGTTTTGCTATGGTTTGTGTAAACAGTaGAGACCGCTACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: EDGVNLMFCYGLCKQ*RPLQKAGCYKGKVA
Trigger: GGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTAGCGGTCTCAACTGTTTACACAAACCATAGCAAAACATTAGATTAACTCCATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR-3UTR CAA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATTCCTCTTCCTGTGTCTaGAGGCAAGTCAAGACTACG +
Preference number: 3 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHSSSCV*RQVKTT
Trigger: CGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGA...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
3UTR CCA 72 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTaGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCG +
Preference number: 3 (lower is better)
Translates to: LFLCLEASQDYV*LCHPSLGLDSS
Trigger: CGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
3UTR CCA 72 bp TCAGGAATTTCAAATTGTACTGCAAAGAAGGCCCGCTaGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACC +
Preference number: 3 (lower is better)
Translates to: SGISNCTAKKAR*SLLGALSLTLT
Trigger: GGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTTGAAATTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
3UTR-3UTR CAA 90 bp GGACATTTAGTACTGAACGCTTTGGAAGCACAGAGCACATTTTCTTCCTGCAACTCCTCTTCCTGTGTCTaGAGGCAAGTCAAGACTACG +
Preference number: 3 (lower is better)
Translates to: GHLVLNALEAQSTFSSCNSSSCV*RQVKTT
Trigger: CGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGA...GTTGCAGGAAGAAAATGTGCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR TCA 72 bp TGGAAGCACAGAGCACATTTTCTTCCTGCAACTATCTaGGGACAGCAGCACTATGACGCCAGTTTAGTGTTA +
Preference number: 3 (lower is better)
Translates to: WKHRAHFLPATI*GQQHYDASLVL
Trigger: TAACACTAAACTGGCGTCATAGTGCTGCTGTCCTCAGATAGTTGCAGGAAGAAAATGTGCTCTGTGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR-3UTR CAA 90 bp ACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGTTTGGTTTAATAAAATaGGCAGGAGTCTTAGCAGAG +
Preference number: 3 (lower is better)
Translates to: TLWKHRGHLVLNALEAQRFGLIK*AGVLAE
Trigger: CTCTGCTAAGACTCCTGCCAATTTTATTAAACCAAA...CCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR GCA 72 bp AACTATTTTCATGTAACTCCCACAGAAGGAGTTTGCTaGGCTAGCTCACTTCCCTTCTTAAGAAGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: NYFHVTPTEGVC*ASSLPFLRSWC
Trigger: ACACCAACTTCTTAAGAAGGGAAGTGAGCTAGCGCAGCAAACTCCTTCTGTGGGAGTTACATGAAAATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR CCA 72 bp GACCGCTACAGAAAGCAGGCTGCTATAAAGGTAAAGTaGCCTCAGAAACCCAACAGTAAAATGTTCAATTTG +
Preference number: 3 (lower is better)
Translates to: DRYRKQAAIKVK*PQKPNSKMFNL
Trigger: CAAATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTAGCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR GCA 72 bp AAAAACTATTTTCATGTAACTCCCACAGAAGGAGTTTaGTGCGCTAGCTCACTTCCCTTCTTAAGAAGTTGG +
Preference number: 3 (lower is better)
Translates to: KNYFHVTPTEGV*CASSLPFLRSW
Trigger: CCAACTTCTTAAGAAGGGAAGTGAGCTAGCGCAGCAAACTCCTTCTGTGGGAGTTACATGAAAATAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR GCA 72 bp CAAACATTAGGAGAAGATGGAGTTAATCTAATGTTTTaGTATGGTTTGTGTAAACAGTTGAGACCGCTACAG +
Preference number: 3 (lower is better)
Translates to: QTLGEDGVNLMF*YGLCKQLRPLQ
Trigger: CTGTAGCGGTCTCAACTGTTTACACAAACCATAGCAAAACATTAGATTAACTCCATCTTCTCCTAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATGCTGTCCCCACCCACTaGCCGCCCAGCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHAVPTH*PPSRQP
Trigger: GGGCTGCCTGCTGGGCGGGCAGTGGGTGGGGACAGC...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTCAGGGGTTCCTCCTTaGTCTGCACGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GPLVSAGSALTYADPATGSGVPP*SARWAG
Trigger: TCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGA...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGCTGTCCCCACCCACTaGCCGCCCAGCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAAVPTH*PPSRQP
Trigger: GGGCTGCCTGCTGGGCGGGCAGTGGGTGGGGACAGC...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCCGGCGCTGGCGAGCCTaGTCGGACTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCRRWRA*SDSGLE
Trigger: CTCCAGGCCAGAGTCCGAGCAGGCTCGCCAGCGCCG...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTCGCCACCTTCTGGATaGCACGTAGAACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GPLVSAGSALTYADPATGSPPSG*HVEQPQ
Trigger: CTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGA...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGGCAGGCCTGCCAGGTaGAGGTTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPGRPAR*RLKRRL
Trigger: CAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACCACTGAAGAGTATATaGCCCGGGGGCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPPLKSI*PGGRPA
Trigger: GGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGG...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCTGGCCAACTTGGTGCTaGGGCAAGTGCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KEGPLVSAGSALTYADPAWPTWC*GKCWVQ
Trigger: CTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCA...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACCGGCGCTGGCGAGCCTaGTCGGACTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDRRWRA*SDSGLE
Trigger: CTCCAGGCCAGAGTCCGAGCAGGCTCGCCAGCGCCG...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATGGTCTGAGACGCCACTaGAGAGTATATGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHGLRRH*RVYGPG
Trigger: CCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACC...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTCTTCTCCACATTCTTaGGTCAGCCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: GPLVSAGSALTYADPATGSSPHS*VSRDWI
Trigger: GATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGA...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCGGCGCTGGCGAGCCTaGTCGGACTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RQILFLCLEASQDYVWLCRRWRA*SDSGLE
Trigger: CTCCAGGCCAGAGTCCGAGCAGGCTCGCCAGCGCCG...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGACCACAGCATGTGCTaGCGCTGGACCACATCTGGA +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPDHSMC*RWTTSG
Trigger: TCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGTC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATCCCGACCACAGCATGTaGTGCCGCTGGACCACATCT +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHPDHSM*CRWTTS
Trigger: AGATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGG...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGGTTCCTCCTTGATCTaGACGCTGGGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPGSSLI*TLGRTV
Trigger: CACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCGCTGGGCAGGACTGTaGCTGCCCGCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYARWAGL*LPASAP
Trigger: AGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGACCCCGCTGGATCCCTaGCACAGCAGGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVETPLDP*HSRYWR
Trigger: GCGCCAGTACCTGCTGTGTCAGGGATCCAGCGGGGT...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTCGGTGCTTGGCATCTaGCTTATCAAGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GPLVSAGSALTYADPATGSVLGI*LIKVGE
Trigger: TTCTCCTACCTTGATAAGGCAGATGCCAAGCACCGA...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATGGTTCCTCCTTGATCTaGACGCTGGGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHGSSLI*TLGRTV
Trigger: CACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACC...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCGCCCGGGGGCAGGCCTaGCAGGTGCAGGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGARGQA*QVQVEE
Trigger: CTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGC...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATAAAGGCACCAGTATCTaGTTGCAGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHKGTSI*LQPAAS
Trigger: GCTGGCCGCTGGCTGCAAGCAGATACTGGTGCCTTT...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAAACGAGCTGTGTTGCTaGTGGTCTGGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPNELCC*WSGRSR
Trigger: TCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTT...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACAAGGTAGGAGAAGCTaGGCCGAAGCTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPQGRRS*AEAVGC
Trigger: GCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTG...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGCGCTGGGCAGGACTGTaGCTGCCCGCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVERWAGL*LPASAP
Trigger: AGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCG...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCACCCCGCTGGATCCCTaGCACAGCAGGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSTPLDP*HSRYWR
Trigger: GCGCCAGTACCTGCTGTGTCAGGGATCCAGCGGGGT...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTACCCCGCTGGATCCCTaGCACAGCAGGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWITPLDP*HSRYWR
Trigger: GCGCCAGTACCTGCTGTGTCAGGGATCCAGCGGGGT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCCAAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCQSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTTG...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCCAAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGQSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTTG...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCGAGGCAAGTGCTGGGTaGAGTGTCCATGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGEASAG*SVHGLL
Trigger: GAGGAGCCCATGGACACTGCACCCAGCACTTGCCTC...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCACAGGCAACCGGGTTaGTGGCACAGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAHRQPG*WHSLEL
Trigger: CAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCGCACCAGTATCTGCTTaGAGCCAGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSAAPVSA*SQRPAP
Trigger: CGGTGCTGGCCGCTGGCTGCAAGCAGATACTGGTGC...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCATTTCAAGCAAAACCTaGCGATGCTGGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: GPLVSAGSALTYADPATGISSKT*RCWSLM
Trigger: CATGAGTGACCAGCATCGGCAGGTTTTGCTTGAAAT...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCGCTGGGCAGGACTGTaGCTGCCCGCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RQILFLCLEASQDYVWLCRWAGL*LPASAP
Trigger: AGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCG...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGGAAGCAGCAGTCTGTaGGGGAAAAGGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPGSSSL*GKRHQY
Trigger: ATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTCC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGATCAGGGGTTCCTCCTTaGTCTGCACGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRSGVPP*SARWAG
Trigger: TCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGA...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTGGCCAACTTGGTGCTaGGGCAAGTGCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEWPTWC*GKCWVQ
Trigger: CTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCA...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACGGTCTGAGACGCCACTaGAGAGTATATGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDGLRRH*RVYGPG
Trigger: CCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACC...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGGTCTGAGACGCCACTaGAGAGTATATGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELAGLRRH*RVYGPG
Trigger: CCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACC...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCACGTTCAGTGCGATCTaGTCCCCTTTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGTFSAI*SPLLRQ
Trigger: CTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGT...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCGACCACAGCATGTGCTaGCGCTGGACCACATCTGGA +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCDHSMC*RWTTSG
Trigger: TCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGTC...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGCCCGACCACAGCATGTaGTGCCGCTGGACCACATCT +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEPDHSM*CRWTTS
Trigger: AGATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGG...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAAAGAAGGCATGGTTCTaGTGGGCCTTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPKKAWF*WALVLA
Trigger: AGCCAAAACCAAGGCCCAGCAGAACCATGCCTTCTT...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCGCTGTCCCCACCCACTaGCCGCCCAGCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLNALEAQRTFSTERFGSAVPTH*PPSRQP
Trigger: GGGCTGCCTGCTGGGCGGGCAGTGGGTGGGGACAGC...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGACACAGGCAACCGGGTTaGTGGCACAGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRHRQPG*WHSLEL
Trigger: CAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTG...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCGGCAGGCCTGCCAGGTaGAGGTTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSGRPAR*RLKRRL
Trigger: CAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCC...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCGCACCAGTATCTGCTTaGAGCCAGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RQILFLCLEASQDYVWLCAPVSA*SQRPAP
Trigger: CGGTGCTGGCCGCTGGCTGCAAGCAGATACTGGTGC...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGCACCAGTATCTGCTTaGAGCCAGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RPPGRQILFLCLEASQDYAPVSA*SQRPAP
Trigger: CGGTGCTGGCCGCTGGCTGCAAGCAGATACTGGTGC...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGAGCTGTGTTGCTGGTaGTCTGGGAGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAELCCW*SGRSRR
Trigger: CCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTC...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATCCCTCTCTCGGTGCTTaGCATCTGCCTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHPSLGA*HLPYQG
Trigger: ACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGG...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCCCTCAGCGCAGAGTTTaGTCACTGCTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGPQRRV*SLLPPP
Trigger: AGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGG...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCCACTGAAGAGTATATaGCCCGGGGGCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIPLKSI*PGGRPA
Trigger: GGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGG...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGGACGCACAGGATACTaGAAGAGATACAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPGRTGY*KRYSFS
Trigger: AGAGAAGCTGTATCTCTTTCAGTATCCTGTGCGTCC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAACGTTCAGTGCGATCTaGTCCCCTTTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELATFSAI*SPLLRQ
Trigger: CTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGT...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCATAACGAGCTGTGTTaGTGGTGGTCTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAHNELC*WWSGRS
Trigger: GCTCCTCCCAGACCACCAGCAACACAGCTCGTTATG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCGCCTCCCTCTCTCGGTaGTTGGCATCTGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCASLSR*LASALS
Trigger: TGATAAGGCAGATGCCAAGCACCGAGAGAGGGAGGC...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCCCCTGCCTCATTGGCTaGCTCCCTCTCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLPCLIG*LPLSVL
Trigger: AAGCACCGAGAGAGGGAGGCAGCCAATGAGGCAGGG...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCCTCACTACAGCCATGTaGTCCAGAAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: KEGPLVSAGSALTYADPALTTAM*SRKSFT
Trigger: TGTGAAGGACTTTCTGGAGCACATGGCTGTAGTGAG...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGCCCGACCACAGCATGTaGTGCCGCTGGACCACATCT +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVPDHSM*CRWTTS
Trigger: AGATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGG...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGAGGCAAGTGCTGGGTaGAGTGTCCATGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVEASAG*SVHGLL
Trigger: GAGGAGCCCATGGACACTGCACCCAGCACTTGCCTC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGAAAGGCACCAGTATCTaGTTGCAGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEKGTSI*LQPAAS
Trigger: GCTGGCCGCTGGCTGCAAGCAGATACTGGTGCCTTT...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGAGCTGTGTTGCTGGTaGTCTGGGAGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELAELCCW*SGRSRR
Trigger: CCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTC...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGTCCTTCTCCTCCTCTaGGCTGGGCGGCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVVLLLL*AGRHEH
Trigger: ATGCTCATGCCGCCCAGCCCAGAGGAGGAGAAGGAC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCCCGCTGGACCACATCTaGATGCTTCTTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: KEGPLVSAGSALTYADPAPLDHI*MLLDKL
Trigger: GAGTTTATCAAGAAGCATCCAGATGTGGTCCAGCGG...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGCTGGGCCTTGGTTTTaGCTGTTTGGACCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAAGPWF*LFGPAV
Trigger: AACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGC...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCGCTCCAAGAAGGCATaGTTCTGCTGGGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYARSKKA*FCWALV
Trigger: AACCAAGGCCCAGCAGAACCATGCCTTCTTGGAGCG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCATGGGTGCAGTGTCCATaGGCTCCTCTTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELAWVQCP*APLPQP
Trigger: AGGCTGAGGAAGAGGAGCCCATGGACACTGCACCCA...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAACCGTCCACGTTCAGTaGGATCTGCTCCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELATVHVQ*DLLPFA
Trigger: AGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGT...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTTAACGTCTTCTTCTaGCTCGTCCTGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: KKARWSLLGALSLTLTLPLNVFF*LVLRRI
Trigger: GATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAG...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAAGCGGCTGTCCCTCATaGCATAGTAGTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELASGCPS*HSSAGG
Trigger: TCCACCTGCACTACTATGGCATGAGGGACAGCCGCT...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTGACCACAGCATGTGCTaGCGCTGGACCACATCTGGA +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIDHSMC*RWTTSG
Trigger: TCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGTC...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGGTTCCTCCTTGATCTaGACGCTGGGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVGSSLI*TLGRTV
Trigger: CACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACAAAGGCACCAGTATCTaGTTGCAGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYKGTSI*LQPAAS
Trigger: GCTGGCCGCTGGCTGCAAGCAGATACTGGTGCCTTT...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACCAAGGTAGGAGAAGCTaGGCCGAAGCTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDQGRRS*AEAVGC
Trigger: GCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTG...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCCCCTCTCTCGGTGCTTaGCATCTGCCTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCPSLGA*HLPYQG
Trigger: ACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGG...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGCTGGGCCTTGGTTTTaGCTGTTTGGACCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRAGPWF*LFGPAV
Trigger: AACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGC...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCACGCTCCAAGAAGGCATaGTTCTGCTGGGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELARSKKA*FCWALV
Trigger: AACCAAGGCCCAGCAGAACCATGCCTTCTTGGAGCG...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCATTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCIHWVT*RAPCSL
Trigger: TAGAGAACACGGAGCTCGTCAAGTCACCCAGTGAAT...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATAGCACAAACTGTCTCTaGAAGGTGGCTTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHSTNCL*KVASTK
Trigger: TTTTGTGGAAGCCACCTTTCAGAGACAGTTTGTGCT...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCTCTGCTCCCCTTTGCTaGGGCAGTAGTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSASAPLC*GSSWDS
Trigger: TGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGA...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCGATCTGCTCCCCTTTaGTGCGGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSRSAPL*CGSSWD
Trigger: ATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCG...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGATCTGCTCCCCTTTaGTGCGGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIRSAPL*CGSSWD
Trigger: ATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCG...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCGAGGAGCAGAAGGTCTaGTTGTCCATCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGEEQKV*LSISFE
Trigger: CTCAAAGCTGATGGACAAGCAGACCTTCTGCTCCTC...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACCATAACGAGCTGTGTTaGTGGTGGTCTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPPGRQILFLCLEASQDYHNELC*WWSGRS
Trigger: GCTCCTCCCAGACCACCAGCAACACAGCTCGTTATG...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCGCCTCCCTCTCTCGGTaGTTGGCATCTGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLASLSR*LASALS
Trigger: TGATAAGGCAGATGCCAAGCACCGAGAGAGGGAGGC...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCAGCGGCTGTCCCTCATaGCATAGTAGTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLSGCPS*HSSAGG
Trigger: TCCACCTGCACTACTATGGCATGAGGGACAGCCGCT...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTCGCCACCTTCTGGATaGCACGTAGAACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLSPPSG*HVEQPQ
Trigger: CTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGA...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCACTAATTTGGCCTGGATaGCCGACCACAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELALIWPG*PTTACA
Trigger: AGCACATGCTGTGGTCGGGCATCCAGGCCAAATTAG...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCAGGGCAAATACCTTCTaGTCATCAGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCRANTF*SSGEAA
Trigger: TGCTGCTTCCCCTGATGAGCAGAAGGTATTTGCCCT...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATATTTCAAGCAAAACCTaGCGATGCTGGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHISSKT*RCWSLM
Trigger: CATGAGTGACCAGCATCGGCAGGTTTTGCTTGAAAT...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCTATCCACCTCCTGTTTaGTTAGCTCTTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: KEGPLVSAGSALTYADPAYPPPV*LALLHI
Trigger: AATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATA...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWICCGSS*DSGCRW
Trigger: CCATCGACACCCTGAATCCCAACTACTGCCGCAGCA...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGCCGSS*DSGCRW
Trigger: CCATCGACACCCTGAATCCCAACTACTGCCGCAGCA...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCAACGAGCTGTGTTGCTaGTGGTCTGGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLNELCC*WSGRSR
Trigger: TCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTT...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACAACGAGCTGTGTTGCTaGTGGTCTGGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYNELCC*WSGRSR
Trigger: TCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTT...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCAAGGTAGGAGAAGCTaGGCCGAAGCTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSQGRRS*AEAVGC
Trigger: GCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTG...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACCCCTCTCTCGGTGCTTaGCATCTGCCTTATCAAGGT +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDPSLGA*HLPYQG
Trigger: ACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGG...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCACCACCCAGTTTCCTTaGACTAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGT...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTTGCCACTGTGAGGGCTaGAAGAATCCTTGGGATACA +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYACHCEG*KNPWDT
Trigger: TGTATCCCAAGGATTCTTCCAGCCCTCACAGTGGCA...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCAGCATGTGCTGCCGCTaGACCACATCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLSMCCR*TTSGCF
Trigger: GAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCT...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCATTGGTTTTGGCTGTTTaGACCCGCTGTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLRVALPSFPGLGFVELALVLAV*TRCSPE
Trigger: CTCTGGGGAACAGCGGGTCCAAACAGCCAAAACCAA...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCAAGGCATGGTTCTGCTaGGCCTTGGTTTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGKAWFC*ALVLAV
Trigger: AACAGCCAAAACCAAGGCCCAGCAGAACCATGCCTT...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGGGGCTTGATCTTGGCTaGGAGATGTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEGLDLG*EMWNVI
Trigger: GATGACATTCCACATCTCTCAGCCAAGATCAAGCCC...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCTCTGCTGTTTGGGCTTaGTCTTGGCTGAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSASAVWA*SWLRDV
Trigger: CACATCTCTCAGCCAAGATCAAGCCCAAACAGCAGA...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCGAGGTATTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGEVFTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAATACCTC...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTACTCCCAGCCTTTGTTaGTTCTCACTACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYATPSLC*FSLQPC
Trigger: ACATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGT...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTCTTCTCCACATTCTTaGGTCAGCCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDSSPHS*VSRDWI
Trigger: GATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGA...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCTCCCCTTTGCTaGGGCAGTAGTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGSAPLC*GSSWDS
Trigger: TGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGA...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGGAGGAGCAGAAGGTCTaGTTGTCCATCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEEEQKV*LSISFE
Trigger: CTCAAAGCTGATGGACAAGCAGACCTTCTGCTCCTC...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACACCTTGCCTGTAGAGTaGAGCGGCATAACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPPGRQILFLCLEASQDYTLPVE*SGITSC
Trigger: ACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGT...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTACCTTGCCTGTAGAGTaGAGCGGCATAACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWITLPVE*SGITSC
Trigger: ACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCAACCGTACCGTGATCTaGTTAACGTCTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGNRTVI*LTSSSA
Trigger: GGCAGAAGAAGACGTTAAGCAGATCACGGTACGGTT...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGGAGTTTGGTCACTGCTaGCACCTCCTTTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVEEFGHC*HLLSYH
Trigger: GTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTC...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCGAGTTTGGTCACTGCTaGCACCTCCTTTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSAEFGHC*HLLSYH
Trigger: GTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTC...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCTAATTTGGCCTGGATaGCCGACCACAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWILIWPG*PTTACA
Trigger: AGCACATGCTGTGGTCGGGCATCCAGGCCAAATTAG...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGCTAATTTGGCCTGGATaGCCGACCACAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVLIWPG*PTTACA
Trigger: AGCACATGCTGTGGTCGGGCATCCAGGCCAAATTAG...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCAGGGCAAATACCTTCTaGTCATCAGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSARANTF*SSGEAA
Trigger: TGCTGCTTCCCCTGATGAGCAGAAGGTATTTGCCCT...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGAACATCGCCACCTTCTaGATGCCACGTAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVNIATF*MPRRTA
Trigger: GGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTT...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCGGCTGGAAGAATCCTTaGGATACAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGGWKNP*DTGCHS
Trigger: AGAGTGACATCCTGTATCCCAAGGATTCTTCCAGCC...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTGCCACTGTGAGGGCTaGAAGAATCCTTGGGATACA +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDCHCEG*KNPWDT
Trigger: TGTATCCCAAGGATTCTTCCAGCCCTCACAGTGGCA...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCCGCTGGACCACATCTaGATGCTTCTTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAPLDHI*MLLDKL
Trigger: GAGTTTATCAAGAAGCATCCAGATGTGGTCCAGCGG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTTGGTTTTGGCTGTTTaGACCCGCTGTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVLVLAV*TRCSPE
Trigger: CTCTGGGGAACAGCGGGTCCAAACAGCCAAAACCAA...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACAAGGCATGGTTCTGCTaGGCCTTGGTTTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HRPPGRQILFLCLEASQDKAWFC*ALVLAV
Trigger: AACAGCCAAAACCAAGGCCCAGCAGAACCATGCCTT...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCATCGATCTCCTGTATaGCTGGGTCATCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LYCKEGPLVSAGSALTYAHRSPV*LGHLLH
Trigger: ATGAAGAAGATGACCCAGTCATACAGGAGATCGATG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGCCGAAGCTGTAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVAEAVG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTACAGCTTCGGC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCCAGGGTTCTTCTGCATaGTTCTTCTGCAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGQGSSA*FFCKNS
Trigger: TGAGTTCTTGCAGAAGAAGCATGCAGAAGAACCCTG...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGAGTTTGGTCACTGCTaGCACCTCCTTTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVEFGHC*HLLSYH
Trigger: GTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTAAGAAGGCATGGTTCTaGTGGGCCTTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIKKAWF*WALVLA
Trigger: AGCCAAAACCAAGGCCCAGCAGAACCATGCCTTCTT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCGATCTCCTGTATGACTaGGTCATCTTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RVALPSFPGLGFVELAVCDLLYD*VIFFIG
Trigger: GCCAATGAAGAAGATGACCCAGTCATACAGGAGATC...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGGCAATGTACGCAGCTaGGCCATAGATAAGACATTG +
Preference number: 4 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRGNVRS*AIDKTL
Trigger: CAATGTCTTATCTATGGCCCAGCTGCGTACATTGCC...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTAACATCGCCACCTTCTaGATGCCACGTAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPNIATF*MPRRTA
Trigger: GGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTT...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACACCACCCAGTTTCCTTaGACTAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RPPGRQILFLCLEASQDYTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGT...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCACCACCCAGTTTCCTTaGACTAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RQILFLCLEASQDYVWLCTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGT...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTAAAACCTGCCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGACCAGCATCGGCAGGTTTT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCAGGACCTTAATCTaGTCAGCCAGAGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSAIRTLI*SARGNV
Trigger: TACATTGCCTCTGGCTGATCAGATTAAGGTCCTGAT...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGACTCCCAGCCTTTGTTaGTTCTCACTACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVTPSLC*FSLQPC
Trigger: ACATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGT...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTCAAGCTCTACCTTCTaGTGTTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVESSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAACAGCAGAAGGTAGAGCTTGA...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GCACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCCGATCTGCTCCCCTTTaGTGCGGCAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: ALNALEAQRTFSTERFGSRSAPL*CGSSWD
Trigger: ATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCG...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp GTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACGTTCAGTGCGATCTaGTCCCCTTTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VLNALEAQRTFSTERFGSTFSAI*SPLLRQ
Trigger: CTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGT...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACTCGGTGCTTGGCATCTaGCTTATCAAGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYSVLGI*LIKVGE
Trigger: TTCTCCTACCTTGATAAGGCAGATGCCAAGCACCGA...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCCTTAACGTCTTCTTCTaGCTCGTCCTGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSALNVFF*LVLRRI
Trigger: GATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAG...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCGACCCAGGGTTCTTCTaGATGCTTCTTCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSDPGFF*MLLLQE
Trigger: TTCTTGCAGAAGAAGCATGCAGAAGAACCCTGGGTC...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGGAAGCACAGAGCACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTCAAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEAQSTFSTERFGSTEDIQSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTTG...AATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTGCTCTGTGCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp ACTTCCCTTCTTAAGAAGTTGGTGTTCACTTCCCATCCTTCTTTCCTTCCGCTTCACAGGCAACCGGGTTaGTGGCACAGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: TSLLKKLVFTSHPSFLPLHRQPG*WHSLEL
Trigger: CAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTG...AAGCGGAAGGAAAGAAGGATGGGAAGTGAACACCAACTTCTTAAGAAGGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTATCCACCTCCTGTTTaGTTAGCTCTTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGYPPPV*LALLHI
Trigger: AATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATA...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTGATTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPDSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAATC...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGGCAATGTACGCAGCTaGGCCATAGATAAGACATTG +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVGNVRS*AIDKTL
Trigger: CAATGTCTTATCTATGGCCCAGCTGCGTACATTGCC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGGCTGGAAGAATCCTTaGGATACAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYGWKNP*DTGCHS
Trigger: AGAGTGACATCCTGTATCCCAAGGATTCTTCCAGCC...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTGGCTGGAAGAATCCTTaGGATACAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIGWKNP*DTGCHS
Trigger: AGAGTGACATCCTGTATCCCAAGGATTCTTCCAGCC...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGAGACTTTTTCTAATTTaGCCTGGATGCCCGACCACA +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVERLFLI*PGCPTT
Trigger: TGTGGTCGGGCATCCAGGCCAAATTAGAAAAAGTCT...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp AAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTCCATCCGGCTTCTTTaGCATGGTTTCTTTTACGAG +
Preference number: 4 (lower is better)
Translates to: KSRLRVALPSFPGLGFVESIRLL*HGFFYE
Trigger: CTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGA...CTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAACTGTCTCTGAAAGGTaGCTTCCACAAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRTVSER*LPQKPS
Trigger: TGAAGGCTTTTGTGGAAGCCACCTTTCAGAGACAGT...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAACCACTGAAGAGTATATaGCCCGGGGGCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKPLKSI*PGGRPA
Trigger: GGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGG...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACCATCGATCTCCTGTATaGCTGGGTCATCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYHRSPV*LGHLLH
Trigger: ATGAAGAAGATGACCCAGTCATACAGGAGATCGATG...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGATCAGGACCTTAATCTaGTCAGCCAGAGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVIRTLI*SARGNV
Trigger: TACATTGCCTCTGGCTGATCAGATTAAGGTCCTGAT...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAATCAGGGGTTCCTCCTTaGTCTGCACGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKSGVPP*SARWAG
Trigger: TCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGA...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTTCAAGCTCTACCTTCTaGTGTTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWISSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAACAGCAGAAGGTAGAGCTTGA...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACCGTCCACGTTCAGTaGGATCTGCTCCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VLNALEAQRTFSTERFGSTVHVQ*DLLPFA
Trigger: AGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGT...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTAACCGTACCGTGATCTaGTTAACGTCTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPNRTVI*LTSSSA
Trigger: GGCAGAAGAAGACGTTAAGCAGATCACGGTACGGTT...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGCAGGGTTCTTCTGCATaGTTCTTCTGCAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVQGSSA*FFCKNS
Trigger: TGAGTTCTTGCAGAAGAAGCATGCAGAAGAACCCTG...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTAGCCCGGGGGCAGGCCTaGCAGGTGCAGGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILARGQA*QVQVEE
Trigger: CTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGC...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTATTTCAAGCAAAACCTaGCGATGCTGGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIISSKT*RCWSLM
Trigger: CATGAGTGACCAGCATCGGCAGGTTTTGCTTGAAAT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGATCTCCTGTATGACTaGGTCATCTTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: PPGRQILFLCLEASQDYVDLLYD*VIFFIG
Trigger: GCCAATGAAGAAGATGACCCAGTCATACAGGAGATC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CCA 90 bp CACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGCACTGAGCTGTGTTGCTGGTaGTCTGGGAGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HRGHLVLNALEAQRTFSTELCCW*SGRSRR
Trigger: CCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTC...AGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp ACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGGGAAGCAGCAGTCTGTaGGGGAAAAGGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLWKHRGHLVLNALEAQRGSSSL*GKRHQY
Trigger: ATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTCC...CCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR TCA 90 bp AGACCGCTACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAAGGGCTTGATCTTGGCTaGGAGATGTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: RPLQKAGCYKGKVASETQGLDLG*EMWNVI
Trigger: GATGACATTCCACATCTCTCAGCCAAGATCAAGCCC...TTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTAGCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp GGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCATCTCAAGCTCTACCTaGAAGAGATACAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GRQILFLCLEASQDYVWLISSST*KRYSFS
Trigger: AGAGAAGCTGTATCTCTTTCAGGTAGAGCTTGAGAT...GAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207481.2
CDS-3UTR GCA 90 bp TTGGAAGCACAGAGCACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTCATAACGAGCTGTGTTaGTGGTGGTCTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LEAQSTFSTERFGSTEDIHNELC*WWSGRS
Trigger: GCTCCTCCCAGACCACCAGCAACACAGCTCGTTATG...AATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTGCTCTGTGCTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATGCCCGGGGGCAGGCCTaGCAGGTGCAGGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYARGQA*QVQVEE
Trigger: CTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGC...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAAGTCCTTCTCCTCCTCTaGGCTGGGCGGCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: RGHLVLNALEAQRTFSTEVLLLL*AGRHEH
Trigger: ATGCTCATGCCGCCCAGCCCAGAGGAGGAGAAGGAC...TTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp AGACCGCTACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAATGCCACTGTGAGGGCTaGAAGAATCCTTGGGATACA +
Preference number: 4 (lower is better)
Translates to: RPLQKAGCYKGKVASETQCHCEG*KNPWDT
Trigger: TGTATCCCAAGGATTCTTCCAGCCCTCACAGTGGCA...TTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTAGCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAATGGGTGCAGTGTCCATaGGCTCCTCTTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKWVQCP*APLPQP
Trigger: AGGCTGAGGAAGAGGAGCCCATGGACACTGCACCCA...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp GCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACGTCATCATAGGTCATTaGAGCAGGACGCACAGGATA +
Preference number: 4 (lower is better)
Translates to: ALEAQRTFSTERFGSTEDVIIGH*SRTHRI
Trigger: TATCCTGTGCGTCCTGCTTCAATGACCTATGATGAC...GTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATCCCTGCCTCATTGGCTaGCTCCCTCTCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNPCLIG*LPLSVL
Trigger: AAGCACCGAGAGAGGGAGGCAGCCAATGAGGCAGGG...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTAGGCAGGCCTGCCAGGTaGAGGTTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILGRPAR*RLKRRL
Trigger: CAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCC...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp TTGGAAGCACAGAGCACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTAACATCGCCACCTTCTaGATGCCACGTAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LEAQSTFSTERFGSTEDINIATF*MPRRTA
Trigger: GGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTT...AATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTGCTCTGTGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAACCTCAGCGCAGAGTTTaGTCACTGCTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RNPAHVSVHSLYYENETQPQRRV*SLLPPP
Trigger: AGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGG...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTAGCATGTGCTGCCGCTaGACCACATCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: KHRGHLVLNALEAQRTFSSMCCR*TTSGCF
Trigger: GAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCT...ACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACCCGGCTTCTTTGGCATaGTTTCTTTTACGAGATTAT +
Preference number: 4 (lower is better)
Translates to: RPPGRQILFLCLEASQDYPASLA*FLLRDY
Trigger: ATAATCTCGTAAAAGAAACCATGCCAAAGAAGCCGG...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR TCA 90 bp GTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCGGACGCACAGGATACTaGAAGAGATACAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLNALEAQRTFSTERFGSGRTGY*KRYSFS
Trigger: AGAGAAGCTGTATCTCTTTCAGTATCCTGTGCGTCC...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR TCA 90 bp AGACCGCTACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAAAGCACAAACTGTCTCTaGAAGGTGGCTTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: RPLQKAGCYKGKVASETQSTNCL*KVASTK
Trigger: TTTTGTGGAAGCCACCTTTCAGAGACAGTTTGTGCT...TTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTAGCGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAAACCGTCCACGTTCAGTaGGATCTGCTCCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RNPAHVSVHSLYYENETQTVHVQ*DLLPFA
Trigger: AGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGT...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATCGCCACCTTCTGGATaGCACGTAGAACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RNPAHVSVHSLYYENETQSPPSG*HVEQPQ
Trigger: CTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGA...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACCCTCAGCGCAGAGTTTaGTCACTGCTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANPQRRV*SLLPPP
Trigger: AGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGG...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATCGCTCCAAGAAGGCATaGTTCTGCTGGGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNRSKKA*FCWALV
Trigger: AACCAAGGCCCAGCAGAACCATGCCTTCTTGGAGCG...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATTGGGTGCAGTGTCCATaGGCTCCTCTTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNWVQCP*APLPQP
Trigger: AGGCTGAGGAAGAGGAGCCCATGGACACTGCACCCA...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR CAA 72 bp TGTGATGGCCCCCTTCTCTCTTTAGCACTGAACGCTTaGGAAGCACAGAGCACATTTAGTACTGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: CDGPLLSLALNA*EAQSTFSTERF
Trigger: AAAGCGTTCAGTACTAAATGTGCTCTGTGCTTCCAAAGCGTTCAGTGCTAAAGAGAGAAGGGGGCCATCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR TCA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKIHWVT*RAPCSL
Trigger: TAGAGAACACGGAGCTCGTCAAGTCACCCAGTGAAT...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATGAGGTATTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNEVFTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAATACCTC...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTGGCCAACTTGGTGCTaGGGCAAGTGCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLWPTWC*GKCWVQ
Trigger: CTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCA...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGCACTGAATCTTCTCCACATTCTTaGGTCAGCCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: RGHLVLNALEAQRTFSTESSPHS*VSRDWI
Trigger: GATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGA...TTCAGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACGCCTCCCTCTCTCGGTaGTTGGCATCTGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANASLSR*LASALS
Trigger: TGATAAGGCAGATGCCAAGCACCGAGAGAGGGAGGC...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATCCCTGCCTCATTGGCTaGCTCCCTCTCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYPCLIG*LPLSVL
Trigger: AAGCACCGAGAGAGGGAGGCAGCCAATGAGGCAGGG...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp ACTTCCCTTCTTAAGAAGTTGGTGTTCACTTCCCATCCTTCTTTCCTTCCGCTTCTCACTACAGCCATGTaGTCCAGAAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: TSLLKKLVFTSHPSFLPLLTTAM*SRKSFT
Trigger: TGTGAAGGACTTTCTGGAGCACATGGCTGTAGTGAG...AAGCGGAAGGAAAGAAGGATGGGAAGTGAACACCAACTTCTTAAGAAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTGTCCTTCTCCTCCTCTaGGCTGGGCGGCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLVLLLL*AGRHEH
Trigger: ATGCTCATGCCGCCCAGCCCAGAGGAGGAGAAGGAC...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp CATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGCACTGAACGCTTTACTCCCAGCCTTTGTTaGTTCTCACTACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: HLVLNALEAQRTFSTERFTPSLC*FSLQPC
Trigger: ACATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGT...AAAGCGTTCAGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATGAGGAGCAGAAGGTCTaGTTGTCCATCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNEEQKV*LSISFE
Trigger: CTCAAAGCTGATGGACAAGCAGACCTTCTGCTCCTC...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATGCCGAAGCTGTAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNAEAVG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTACAGCTTCGGC...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTAGCATGTGCTGCCGCTaGACCACATCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSSMCCR*TTSGCF
Trigger: GAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCT...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAAAAGGCATGGTTCTGCTaGGCCTTGGTTTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RNPAHVSVHSLYYENETQKAWFC*ALVLAV
Trigger: AACAGCCAAAACCAAGGCCCAGCAGAACCATGCCTT...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp CGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAAAAAACCTGCCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RNPAHVSVHSLYYENETQKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGACCAGCATCGGCAGGTTTT...TTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTACG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR CAA 72 bp CTTTGGAAGCACAGAGGACATTTAGCACTGAACGCTTaGGAAGCACAGAGGACATTTAGTACTGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: LWKHRGHLALNA*EAQRTFSTERF
Trigger: AAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTGCTAAATGTCCTCTGTGCTTCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR CAA 72 bp CTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTaGGAAGCACAGAGGACATTTAGCACTGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: LWKHRGHLVLNA*EAQRTFSTERF
Trigger: AAAGCGTTCAGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR TCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACTCTGCTGTTTGGGCTTaGTCTTGGCTGAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANSAVWA*SWLRDV
Trigger: CACATCTCTCAGCCAAGATCAAGCCCAAACAGCAGA...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp TTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAAACTGTCTCTaGAAGGTGGCTTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: LVLNALEAQRTFSTERFGSTNCL*KVASTK
Trigger: TTTTGTGGAAGCCACCTTTCAGAGACAGTTTGTGCT...TCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR GCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTATCTGCTCCCCTTTGCTaGGGCAGTAGTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILSAPLC*GSSWDS
Trigger: TGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGA...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACGCCGAAGCTGTAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANAEAVG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTACAGCTTCGGC...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTAGCGGCTGTCCCTCATaGCATAGTAGTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLSGCPS*HSSAGG
Trigger: TCCACCTGCACTACTATGGCATGAGGGACAGCCGCT...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATCTCACTACAGCCATGTaGTCCAGAAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNLTTAM*SRKSFT
Trigger: TGTGAAGGACTTTCTGGAGCACATGGCTGTAGTGAG...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATGATTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNDSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAATC...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYCCGSS*DSGCRW
Trigger: CCATCGACACCCTGAATCCCAACTACTGCCGCAGCA...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTTCCATCCGGCTTCTTTaGCATGGTTTCTTTTACGAG +
Preference number: 4 (lower is better)
Translates to: KHRGHLVLNALEAQRTFSSIRLL*HGFFYE
Trigger: CTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGA...ACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATGCTGGGCCTTGGTTTTaGCTGTTTGGACCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYAGPWF*LFGPAV
Trigger: AACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGC...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTGGAAGCAGCAGTCTGTaGGGGAAAAGGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSGSSSL*GKRHQY
Trigger: ATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTCC...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR CAA 72 bp CTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTaGGAAGCACAGAGCACATTTTCTTCCTGCAACTAT +
Preference number: 4 (lower is better)
Translates to: LWKHRGHLVLNA*EAQSTFSSCNY
Trigger: ATAGTTGCAGGAAGAAAATGTGCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
3UTR CAA 72 bp CTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTaGGAAGCACAGAGGACATTTAGTACTGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: LWKHRGHLVLNA*EAQRTFSTERF
Trigger: AAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR TCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTATTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSIHWVT*RAPCSL
Trigger: TAGAGAACACGGAGCTCGTCAAGTCACCCAGTGAAT...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp ATAAAATTGGCAGGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTGAGGTATTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: IKLAGVLAERNSKTNYWLEVFTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAATACCTC...AAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCCTGCCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATACCTTGCCTGTAGAGTaGAGCGGCATAACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYTLPVE*SGITSC
Trigger: ACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGT...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATCTTAACGTCTTCTTCTaGCTCGTCCTGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNLNVFF*LVLRRI
Trigger: GATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAG...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATAACCGTACCGTGATCTaGTTAACGTCTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNNRTVI*LTSSSA
Trigger: GGCAGAAGAAGACGTTAAGCAGATCACGGTACGGTT...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTTGGTTTTGGCTGTTTaGACCCGCTGTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYLVLAV*TRCSPE
Trigger: CTCTGGGGAACAGCGGGTCCAAACAGCCAAAACCAA...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAAACTGTCTCTGAAAGGTaGCTTCCACAAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGHLVLNALEAQRTFSTETVSER*LPQKPS
Trigger: TGAAGGCTTTTGTGGAAGCCACCTTTCAGAGACAGT...TTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTAAAACCTGCCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGACCAGCATCGGCAGGTTTT...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACCATCGATCTCCTGTATaGCTGGGTCATCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANHRSPV*LGHLLH
Trigger: ATGAAGAAGATGACCCAGTCATACAGGAGATCGATG...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTGTCATCATAGGTCATTaGAGCAGGACGCACAGGATA +
Preference number: 4 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSVIIGH*SRTHRI
Trigger: TATCCTGTGCGTCCTGCTTCAATGACCTATGATGAC...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR TCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACATCAGGACCTTAATCTaGTCAGCCAGAGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANIRTLI*SARGNV
Trigger: TACATTGCCTCTGGCTGATCAGATTAAGGTCCTGAT...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTATCGGTGCTTGGCATCTaGCTTATCAAGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILSVLGI*LIKVGE
Trigger: TTCTCCTACCTTGATAAGGCAGATGCCAAGCACCGA...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTAGACCCAGGGTTCTTCTaGATGCTTCTTCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILDPGFF*MLLLQE
Trigger: TTCTTGCAGAAGAAGCATGCAGAAGAACCCTGGGTC...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTAGGGCAAATACCTTCTaGTCATCAGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLRANTF*SSGEAA
Trigger: TGCTGCTTCCCCTGATGAGCAGAAGGTATTTGCCCT...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATAGACTTTTTCTAATTTaGCCTGGATGCCCGACCACA +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNRLFLI*PGCPTT
Trigger: TGTGGTCGGGCATCCAGGCCAAATTAGAAAAAGTCT...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp TTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGACCGGCTTCTTTGGCATaGTTTCTTTTACGAGATTAT +
Preference number: 4 (lower is better)
Translates to: LVLNALEAQRTFSTERFGPASLA*FLLRDY
Trigger: ATAATCTCGTAAAAGAAACCATGCCAAAGAAGCCGG...TCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CCA 90 bp GTAATCCTGCCCATGTCAGTGTACACTCTCTTTATTATGAGAATGAAACCCAATTCCATCCGGCTTCTTTaGCATGGTTTCTTTTACGAG +
Preference number: 4 (lower is better)
Translates to: VILPMSVYTLFIMRMKPNSIRLL*HGFFYE
Trigger: CTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGA...ATTGGGTTTCATTCTCATAATAAAGAGAGTGTACACTGACATGGGCAGGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATGACCCAGGGTTCTTCTaGATGCTTCTTCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYDPGFF*MLLLQE
Trigger: TTCTTGCAGAAGAAGCATGCAGAAGAACCCTGGGTC...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR GCA 90 bp TCGCTTATATACTGTTCCACACTTACCTGGTTTAGTTTGCACCTTTATGCAAACTATCCACCTCCTGTTTaGTTAGCTCTTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: SLIYCSTLTWFSLHLYANYPPPV*LALLHI
Trigger: AATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATA...GTTTGCATAAAGGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTCCGCTGGACCACATCTaGATGCTTCTTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLPLDHI*MLLDKL
Trigger: GAGTTTATCAAGAAGCATCCAGATGTGGTCCAGCGG...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTAACTGTCTCTGAAAGGTaGCTTCCACAAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GVLAERNSKTNYWLLGILTVSER*LPQKPS
Trigger: TGAAGGCTTTTGTGGAAGCCACCTTTCAGAGACAGT...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATGATCTCCTGTATGACTaGGTCATCTTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYDLLYD*VIFFIG
Trigger: GCCAATGAAGAAGATGACCCAGTCATACAGGAGATC...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATAGACTTTTTCTAATTTaGCCTGGATGCCCGACCACA +
Preference number: 4 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYRLFLI*PGCPTT
Trigger: TGTGGTCGGGCATCCAGGCCAAATTAGAAAAAGTCT...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
3UTR CAA 72 bp GTTAATCTAATGTTTTGCTATGGTTTGTGTAAACAGTaGAGACCGCTACAGAAAGCAGGCTGCTATAAAGGT +
Preference number: 4 (lower is better)
Translates to: VNLMFCYGLCKQ*RPLQKAGCYKG
Trigger: ACCTTTATAGCAGCCTGCTTTCTGTAGCGGTCTCAACTGTTTACACAAACCATAGCAAAACATTAGATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CCA 90 bp AAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTCCGGCTTCTTTGGCATaGTTTCTTTTACGAGATTAT +
Preference number: 4 (lower is better)
Translates to: KILNHDFRNPAHVSVHSLPASLA*FLLRDY
Trigger: ATAATCTCGTAAAAGAAACCATGCCAAAGAAGCCGG...AAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS TCA 90 bp CACCCACTGCCCGCCCAGCAGGCAGCCCATTGGCCAACTTGGTGCTaGGGCAAGTGCTGGGTGCAGTGTCCATGGGCTCCTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HPLPAQQAAHWPTWC*GKCWVQCPWAPLPQ
Trigger: CTGAGGAAGAGGAGCCCATGGACACTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCTGCCTGCTGGGCGGGCAGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp TCAGCCCCATCGGCTTCCTCCTCACTCAGGGGTTCCTCCTTGATCTaGACGCTGGGCAGGACTGTGGCTGCCCGCATCTGCTCCTTCCGT +
Preference number: 5 (lower is better)
Translates to: SAPSASSSLRGSSLI*TLGRTVAARICSFR
Trigger: ACGGAAGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGAGTGAGGAGGAAGCCGATGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp GGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGGTTCTGCTGGGCCTaGGTTTTGGCTGTTTGGACC +
Preference number: 5 (lower is better)
Translates to: GPLVSAGSALTYADPATGWFCWA*VLAVWT
Trigger: GGTCCAAACAGCCAAAACCAAGGCCCAGCAGAACCA...GCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 90 bp CTGGGTGACTTGACGAGCTCCGTGTTCTCTACCCCGCTGGATCCCTaGCACAGCAGGTACTGGCGCTCATGCTCTGAGCGGCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGDLTSSVFSTPLDP*HSRYWRSCSERLSL
Trigger: GAGGGACAGCCGCTCAGAGCATGAGCGCCAGTACCTGCTGTGTCAGGGATCCAGCGGGGTAGAGAACACGGAGCTCGTCAAGTCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp TCCTCCTTGATCTGCACGCTGGGCAGGACTGTGGCTGCCCGCATCTaGTCCTTCCGTCGCTGCAGTTCACGCTCCAAGAAGGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: SSLICTLGRTVAARI*SFRRCSSRSKKAWF
Trigger: GAACCATGCCTTCTTGGAGCGTGAACTGCAGCGACGGAAGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp ACTCAGGGGTTCCTCCTTGATCTGCACGCTGGGCAGGACTGTGGCTaGCCGCATCTGCTCCTTCCGTCGCTGCAGTTCACGCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TQGFLLDLHAGQDCG*PHLLLPSLQFTLQE
Trigger: TTCTTGGAGCGTGAACTGCAGCGACGGAAGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GAGACGCCACTGAAGAGTATATGGCCCGGGGGCAGGCCTGCCAGGTaGAGGTTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: ETPLKSIWPGGRPAR*RLKRRLSSLSVSTN
Trigger: GTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGGCGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAAGCCCATTGGCCAACTaGGTGCTGAGGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KKARWSLLGALSLTLTLPSPLAN*VLRQVL
Trigger: CAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCT...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp ACCGTATCCTGTAGCATTCGGTCTGAGACGCCACTGAAGAGTATATaGCCCGGGGGCAGGCCTGCCAGGTGCAGGTTGAAGAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: TVSCSIRSETPLKSI*PGGRPARCRLKRRL
Trigger: CAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACCGAATGCTACAGGATACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 90 bp CTCCTCTGGGCTGGGCGGCATGAGCATCATGAGGTATTCACTGGGTaGCTTGACGAGCTCCGTGTTCTCTACCCCGCTGGATCCCTGACA +
Preference number: 5 (lower is better)
Translates to: LLWAGRHEHHEVFTG*LDELRVLYPAGSLT
Trigger: TGTCAGGGATCCAGCGGGGTAGAGAACACGGAGCTCGTCAAGTCACCCAGTGAATACCTCATGATGCTCATGCCGCCCAGCCCAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp CAGCACAGGCACCGTCCACGTTCAGTGCGATCTGCTCCCCTTTGCTaGGGCAGTAGTTGGGATTCAGGGTGTCGATGGCCATCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: QHRHRPRSVRSAPLC*GSSWDSGCRWPSQA
Trigger: AGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTGCCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp CGTCAGCACAGGCACCGTCCACGTTCAGTGCGATCTGCTCCCCTTTaGTGCGGCAGTAGTTGGGATTCAGGGTGTCGATGGCCATCTCAA +
Preference number: 5 (lower is better)
Translates to: RQHRHRPRSVRSAPL*CGSSWDSGCRWPSQ
Trigger: TTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTGCCTGTGCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: HRPPGRQILFLCLEASQDQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCGGGCTGGAAGAATCCTaGGGATACAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: KEGPLVSAGSALTYADPAGLEES*GYRMSL
Trigger: GAGTGACATCCTGTATCCCAAGGATTCTTCCAGCCC...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCACTGGCTGAGCATTGGTTCTGCTGGGCCTaGGTTTTGGCTGTTTGGACC +
Preference number: 5 (lower is better)
Translates to: WSLLGALSLTLTLPLAEHWFCWA*VLAVWT
Trigger: GGTCCAAACAGCCAAAACCAAGGCCCAGCAGAACCA...ATGCTCAGCCAGTGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GGAGCTCACCTTGCCTGTAGAGTGCAGCGGCATAACGAGCTGTGTTaGTGGTGGTCTGGGAGGAGCAGAAGGTCTGCTTGTCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: GAHLACRVQRHNELC*WWSGRSRRSACPSA
Trigger: AGCTGATGGACAAGCAGACCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGTGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp AGGTGGCTTCCACAAAAGCCTTCAGTTCACAGGCAACCGGGTTGCTaGCACAGCCTGGAACTGGGTGTCCATTTAGGCTGTCCCCACCCA +
Preference number: 5 (lower is better)
Translates to: RWLPQKPSVHRQPGC*HSLELGVHLGCPHP
Trigger: TGGGTGGGGACAGCCTAAATGGACACCCAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGAACTGAAGGCTTTTGTGGAAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCAGAGCAGAAGGTCTGCTaGTCCATCAGCTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KKARWSLLGALSLTLTLPEQKVC*SISFEE
Trigger: TTCCTCAAAGCTGATGGACAAGCAGACCTTCTGCTC...TGGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PPGRQILFLCLEASQDYVQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGAGCCACAGGCTaGTCCTTCTCCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSLGATG*SFSSSG
Trigger: CCCAGAGGAGGAGAAGGACAAGCCTGTGGCTCCCAG...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCTGCTGGGCCTTGGTTTaGGCTGTTTGGACCCGCTGT +
Preference number: 5 (lower is better)
Translates to: RVALPSFPGLGFVELAVCCWALV*AVWTRC
Trigger: ACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGCA...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GGAATATGTGCTAGTCTCGTCAGCACAGGCACCGTCCACGTTCAGTaGGATCTGCTCCCCTTTGCTGCGGCAGTAGTTGGGATTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GICASLVSTGTVHVQ*DLLPFAAAVVGIQG
Trigger: ACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTGCCTGTGCTGACGAGACTAGCACATATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp CTCTGGCCTGGAGAACCGTACCGTGATCTGCTTAACGTCTTCTTCTaGCTCGTCCTGAGAAGAATCCCCTGCCTCATTGGCTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: LWPGEPYRDLLNVFF*LVLRRIPCLIGCLP
Trigger: AGGGAGGCAGCCAATGAGGCAGGGGATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAGCAGATCACGGTACGGTTCTCCAGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GCTGTCCCTCATGCCATAGTAGTGCAGGTGGACCCAGGGTTCTTCTaGATGCTTCTTCTGCAAGAACTCATAGGACTGCACGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: AVPHAIVVQVDPGFF*MLLLQELIGLHAAL
Trigger: CAGCGCCGCGTGCAGTCCTATGAGTTCTTGCAGAAGAAGCATGCAGAAGAACCCTGGGTCCACCTGCACTACTATGGCATGAGGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp TCTTTACCACCCAGTTTCCTTGGACTAACATCGCCACCTTCTGGATaGCACGTAGAACAGCCACAGAGTCCACAGAGGGGCCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SLPPSFLGLTSPPSG*HVEQPQSPQRGPGG
Trigger: GCCTCCTGGGCCCCTCTGTGGACTCTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GAAAGGTGGCTTCCACAAAAGCCTTCAGTTCACAGGCAACCGGGTTaGTGGCACAGCCTGGAACTGGGTGTCCATTTAGGCTGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ERWLPQKPSVHRQPG*WHSLELGVHLGCPH
Trigger: GTGGGGACAGCCTAAATGGACACCCAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGAACTGAAGGCTTTTGTGGAAGCCACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp CGTCCACGTTCAGTGCGATCTGCTCCCCTTTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGGCCATCTCAAGCTCTACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RPRSVRSAPLCCGSS*DSGCRWPSQALPSA
Trigger: AGCAGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS CCA 90 bp CACCTTGCCTGTAGAGTGCAGCGGCATAACGAGCTGTGTTGCTGGTaGTCTGGGAGGAGCAGAAGGTCTGCTTGTCCATCAGCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: HLACRVQRHNELCCW*SGRSRRSACPSALR
Trigger: CCTCAAAGCTGATGGACAAGCAGACCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp GCTCACCTTGCCTGTAGAGTGCAGCGGCATAACGAGCTGTGTTGCTaGTGGTCTGGGAGGAGCAGAAGGTCTGCTTGTCCATCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: AHLACRVQRHNELCC*WSGRSRRSACPSAL
Trigger: CAAAGCTGATGGACAAGCAGACCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTTATGCCGCTGCACTCTACAGGCAAGGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTCTTGGTTTTGGCTGTTaGGACCCGCTGTTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LYCKEGPLVSAGSALTYALGFGC*DPLFPR
Trigger: TCTGGGGAACAGCGGGTCCAAACAGCCAAAACCAAG...AGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACTCACAGGCAACCGGGTaGCTGGCACAGCCTGGAACT +
Preference number: 5 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYSQATG*LAQPGT
Trigger: AGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGA...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAAGGTTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RLRVALPSFPGLGFVELARLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCT...TGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCAGGTTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSARLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCT...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 90 bp ACAAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCATGCCACTGTaGGGGCTGGAAGAATCCTTGGGATACAGGATGTCACTCTTTACC +
Preference number: 5 (lower is better)
Translates to: TKSRPLQSTSAGMPL*GLEESLGYRMSLFT
Trigger: GGTAAAGAGTGACATCCTGTATCCCAAGGATTCTTCCAGCCCTCACAGTGGCATGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GTCTTCTTCTGCCTCGTCCTGAGAAGAATCCCCTGCCTCATTGGCTaGCTCCCTCTCTCGGTGCTTGGCATCTGCCTTATCAAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: VFFCLVLRRIPCLIG*LPLSVLGICLIKVG
Trigger: TCCTACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGGAGGCAGCCAATGAGGCAGGGGATTCTTCTCAGGACGAGGCAGAAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp CCCTCTCTCGGTGCTTGGCATCTGCCTTATCAAGGTAGGAGAAGCTaGGCCGAAGCTGTAGGATGCCATGTAAAGGTGTCAGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PSLGAWHLPYQGRRS*AEAVGCHVKVSGGA
Trigger: AGCTCCACCTGACACCTTTACATGGCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp CGTCCACGTTCAGTGCGATCTGCTCCCCTTTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGGCCATCTCAAGCTCTACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: RPRSVRSAPLCCGSS*DSGCRWPSQALPER
Trigger: TCTTTCAGGTAGAGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGAGTTAGCAGTTTGCGGGCTGGAAGAATCCTaGGGATACAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: RVALPSFPGLGFVELAVCGLEES*GYRMSL
Trigger: GAGTGACATCCTGTATCCCAAGGATTCTTCCAGCCC...GCAAACTGCTAACTCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTGCTGGGCCTTGGTTTaGGCTGTTTGGACCCGCTGT +
Preference number: 5 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGCWALV*AVWTRC
Trigger: ACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGCA...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACTGCTGGGCCTTGGTTTaGGCTGTTTGGACCCGCTGT +
Preference number: 5 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYCWALV*AVWTRC
Trigger: ACAGCGGGTCCAAACAGCCAAAACCAAGGCCCAGCA...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTAGCCCATTGGCCAACTaGGTGCTGAGGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LRQVKTTCGSAILPWAWISPLAN*VLRQVL
Trigger: CAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCT...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACGCTGACCCTGCCTTATCCACCTCCTGTTaGCTTAGCTCTTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: KEGPLVSAGSALTYADPALSTSC*LSSSPH
Trigger: ATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATAA...GGCAGGGTCAGCGTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CACAGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACGCCATAGATAAGACATaGCTGGGAGCCACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: HRPPGRQILFLCLEASQDAIDKT*LGATGL
Trigger: CAAGCCTGTGGCTCCCAGCAATGTCTTATCTATGGC...GTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCTTGGTTTTGGCTGTTaGGACCCGCTGTTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LRQVKTTCGSAILPWAWILGFGC*DPLFPR
Trigger: TCTGGGGAACAGCGGGTCCAAACAGCCAAAACCAAG...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTAGGTTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCT...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 90 bp GGCTGTTTGGACCCGCTGTTCCCCAGAGACCAGACCAACAGGCGCTaGTTGTCCATCCGGCTTCTTTGGCATGGTTTCTTTTACGAGATT +
Preference number: 5 (lower is better)
Translates to: GCLDPLFPRDQTNRR*LSIRLLWHGFFYEI
Trigger: AATCTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGACAATCAGCGCCTGTTGGTCTGGTCTCTGGGGAACAGCGGGTCCAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 90 bp TTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTaGAAGGTGGCTTCCACAAAAGCCTTCAGTTCACAGGCAACCGGG +
Preference number: 5 (lower is better)
Translates to: LKRRLSSLSVSTNCL*KVASTKAFSSQATG
Trigger: CCCGGTTGCCTGTGAACTGAAGGCTTTTGTGGAAGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp CATCTGCCTTATCAAGGTAGGAGAAGCTGGGCCGAAGCTGTAGGATaGCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCCTGTAGAGTG +
Preference number: 5 (lower is better)
Translates to: HLPYQGRRSWAEAVG*HVKVSGGAHLACRV
Trigger: CACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTGATAAGGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTCGTCGATATTCACTGGGTGACTaGACGAGCTCCGTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: QVKTTCGSAILPWAWIRRYSLGD*TSSVFS
Trigger: AGAGAACACGGAGCTCGTCAAGTCACCCAGTGAATA...TCGACGAATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCGGGCTGGAAGAATCCTaGGGATACAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSGLEES*GYRMSL
Trigger: GAGTGACATCCTGTATCCCAAGGATTCTTCCAGCCC...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCAAGAACTCCCAGCCTTaGTTGATTCTCACTACAGCC +
Preference number: 5 (lower is better)
Translates to: LCLEASQDYVWLCHPSLGKNSQP*LILTTA
Trigger: GGCTGTAGTGAGAATCAACAAAGGCTGGGAGTTCTT...GCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCCTGGGCTTGGATTGAGCAGAAGGTCTGCTaGTCCATCAGCTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LRQVKTTCGSAILPWAWIEQKVC*SISFEE
Trigger: TTCCTCAAAGCTGATGGACAAGCAGACCTTCTGCTC...AATCCAAGCCCAGGGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp GGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCAACTCCCAGCCTTTGTaGATTCTCACTACAGCCATG +
Preference number: 5 (lower is better)
Translates to: GRSSSCVLRQVKTTCGSANSQPL*ILTTAM
Trigger: CATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGTT...GGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCTCTTCTCCACATTCTaGAGTCAGCCGAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: RQILFLCLEASQDYVWLCLFSTF*SQPRLD
Trigger: ATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGAG...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGTTTGGGCTTGATCTaGGCTGAGAGATGTGGAATG +
Preference number: 5 (lower is better)
Translates to: PPGRQILFLCLEASQDYVCLGLI*AERCGM
Trigger: CATTCCACATCTCTCAGCCAAGATCAAGCCCAAACA...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAACTGGGAGCCACAGGCTaGTCCTTCTCCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKLGATG*SFSSSG
Trigger: CCCAGAGGAGGAGAAGGACAAGCCTGTGGCTCCCAG...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp CAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCAACTCCCAGCCTTTGTaGATTCTCACTACAGCCATG +
Preference number: 5 (lower is better)
Translates to: QVGRSSSCVLRQVKTTCGNSQPL*ILTTAM
Trigger: CATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGTT...GCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AGGCCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACAAGAACTCCCAGCCTTaGTTGATTCTCACTACAGCC +
Preference number: 5 (lower is better)
Translates to: RPPGRQILFLCLEASQDYKNSQP*LILTTA
Trigger: GGCTGTAGTGAGAATCAACAAAGGCTGGGAGTTCTT...GTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTCCGTCCATCCGGCTTCTTaGGCATGGTTTCTTTTACGA +
Preference number: 5 (lower is better)
Translates to: LFLCLEASQDYVWLCHPSVHPAS*AWFLLR
Trigger: TCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGAC...GGAAGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp CCACCAGGTAGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGGTCCATCCGGCTTCTTaGGCATGGTTTCTTTTACGA +
Preference number: 5 (lower is better)
Translates to: PPGRQILFLCLEASQDYVVHPAS*AWFLLR
Trigger: TCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGAC...CACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCTACCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTCTCTTCTCCACATTCTaGAGTCAGCCGAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPLFSTF*SQPRLD
Trigger: ATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGAG...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 90 bp GGCAGTAAGAACTCCCAGCCTTTGTTGATTCTCACTACAGCCATGTaGTCCAGAAAGTCCTTCACATCCTCAGCGCAGAGTTTGGTCACT +
Preference number: 5 (lower is better)
Translates to: GSKNSQPLLILTTAM*SRKSFTSSAQSLVT
Trigger: AGTGACCAAACTCTGCGCTGAGGATGTGAAGGACTTTCTGGAGCACATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGTTCTTACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 90 bp GAATCCTTGGGATACAGGATGTCACTCTTTACCACCCAGTTTCCTTaGACTAACATCGCCACCTTCTGGATGCCACGTAGAACAGCCACA +
Preference number: 5 (lower is better)
Translates to: ESLGYRMSLFTTQFP*TNIATFWMPRRTAT
Trigger: TGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGTAAAGAGTGACATCCTGTATCCCAAGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp ATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCCATCCTTGTCATCATAGGTCATaGAAGCAGGACGCACAGGAT +
Preference number: 5 (lower is better)
Translates to: ILFLCLEASQDYVWLCHPCHHRS*KQDAQD
Trigger: ATCCTGTGCGTCCTGCTTCAATGACCTATGATGACA...AGGATGGCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGCACTGAATCACAGGCAACCGGGTaGCTGGCACAGCCTGGAACT +
Preference number: 5 (lower is better)
Translates to: RGHLVLNALEAQRTFSTESQATG*LAQPGT
Trigger: AGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGA...TTCAGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp AGGCAGATCCTCTTCCTGTGTCTTGAGGCAAGTCAAGACTACGTGTGGCTCTGCTTATCCACCTCCTGTTaGCTTAGCTCTTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: RQILFLCLEASQDYVWLCLSTSC*LSSSPH
Trigger: ATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATAA...GCAGAGCCACACGTAGTCTTGACTTGCCTCAAGACACAGGAAGAGGATCTGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AAATTGTACTGCAAAGAAGGCCCGCTGGTCTCTGCTGGGAGCGCTCTCACTTACTTATCCACCTCCTGTTaGCTTAGCTCTTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: KLYCKEGPLVSAGSALTYLSTSC*LSSSPH
Trigger: ATGTGGAGAAGAGCTAAGCAAACAGGAGGTGGATAA...GTAAGTGAGAGCGCTCCCAGCAGAGACCAGCGGGCCTTCTTTGCAGTACAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp GCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACGAGCAGAAGGTCTGCTaGTCCATCAGCTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: ALEAQRTFSTERFGSTEDEQKVC*SISFEE
Trigger: TTCCTCAAAGCTGATGGACAAGCAGACCTTCTGCTC...GTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS TCA 90 bp TTAGCGAAGGGCATGACTTTCACGTTCTTCATCAGGACCTTAATCTaGTCAGCCAGAGGCAATGTACGCAGCTGGGCCATAGATAAGACA +
Preference number: 5 (lower is better)
Translates to: LAKGMTFTFFIRTLI*SARGNVRSWAIDKT
Trigger: TGTCTTATCTATGGCCCAGCTGCGTACATTGCCTCTGGCTGATCAGATTAAGGTCCTGATGAAGAACGTGAAAGTCATGCCCTTCGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp TGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTGCCATAGATAAGACATaGCTGGGAGCCACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: WKHRGHLVLNALEAQRTFAIDKT*LGATGL
Trigger: CAAGCCTGTGGCTCCCAGCAATGTCTTATCTATGGC...AAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp TGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTTCTACCTTCTGCTGTTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: WKHRGHLVLNALEAQRTFSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAACAGCAGAAGGTAGA...AAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp ATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTCTTTATCTGGGAGCCACAGGCTaGTCCTTCTCCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ILNHDFRNPAHVSVHSLYLGATG*SFSSSG
Trigger: CCCAGAGGAGGAGAAGGACAAGCCTGTGGCTCCCAG...ATAAAGAGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp GTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGAAGCAACTCCCAGCCTTTGTaGATTCTCACTACAGCCATG +
Preference number: 5 (lower is better)
Translates to: VLNALEAQRTFSTERFGSNSQPL*ILTTAM
Trigger: CATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGTT...GCTTCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAATGGTTCTGCTGGGCCTaGGTTTTGGCTGTTTGGACC +
Preference number: 5 (lower is better)
Translates to: RGHLVLNALEAQRTFSTEWFCWA*VLAVWT
Trigger: GGTCCAAACAGCCAAAACCAAGGCCCAGCAGAACCA...TTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTATCACAGGCAACCGGGTaGCTGGCACAGCCTGGAACT +
Preference number: 5 (lower is better)
Translates to: GVLAERNSKTNYWLLGILSQATG*LAQPGT
Trigger: AGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGA...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp TTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGTACTGAACGCTTTGGATATTCACTGGGTGACTaGACGAGCTCCGTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVLNALEAQRTFSTERFGYSLGD*TSSVFS
Trigger: AGAGAACACGGAGCTCGTCAAGTCACCCAGTGAATA...TCCAAAGCGTTCAGTACTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS CCA 90 bp AGACCAGACCAACAGGCGCTGATTGTCCATCCGGCTTCTTTGGCATaGTTTCTTTTACGAGATTATAGACTTTTTCTAATTTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RPDQQALIVHPASLA*FLLRDYRLFLIWPG
Trigger: TCCAGGCCAAATTAGAAAAAGTCTATAATCTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGACAATCAGCGCCTGTTGGTCTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS-3UTR CAA 90 bp AGAGGACATTTAGTACTGAACGCTTTGGAAGCACAGAGGACATTTAGCACTGAATGTTTGGGCTTGATCTaGGCTGAGAGATGTGGAATG +
Preference number: 5 (lower is better)
Translates to: RGHLVLNALEAQRTFSTECLGLI*AERCGM
Trigger: CATTCCACATCTCTCAGCCAAGATCAAGCCCAAACA...TTCAGTGCTAAATGTCCTCTGTGCTTCCAAAGCGTTCAGTACTAAATGTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033173.15
CDS-3UTR CAA 90 bp TACAGAAAGCAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAAAGAACTCCCAGCCTTaGTTGATTCTCACTACAGCC +
Preference number: 5 (lower is better)
Translates to: YRKQAAIKVKWPQKPNSKKNSQP*LILTTA
Trigger: GGCTGTAGTGAGAATCAACAAAGGCTGGGAGTTCTT...TTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTGCTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp ATAAAATTGGCAGGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTAGCCCATTGGCCAACTaGGTGCTGAGGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: IKLAGVLAERNSKTNYWLSPLAN*VLRQVL
Trigger: CAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCT...AAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCCTGCCAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATCTCTTCTCCACATTCTaGAGTCAGCCGAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNLFSTF*SQPRLD
Trigger: ATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGAG...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp CAGGCTGCTATAAAGGTAAAGTGGCCTCAGAAACCCAACAGTAAAATGTTCAATTGTCATCATAGGTCATaGAAGCAGGACGCACAGGAT +
Preference number: 5 (lower is better)
Translates to: QAAIKVKWPQKPNSKMFNCHHRS*KQDAQD
Trigger: ATCCTGTGCGTCCTGCTTCAATGACCTATGATGACA...ATTGAACATTTTACTGTTGGGTTTCTGAGGCCACTTTACCTTTATAGCAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp AGGAAAATATTAAACCATGATTTTCGTAATCCTGCCCATGTCAGTGTACACTCTGCCATAGATAAGACATaGCTGGGAGCCACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: RKILNHDFRNPAHVSVHSAIDKT*LGATGL
Trigger: CAAGCCTGTGGCTCCCAGCAATGTCTTATCTATGGC...AGAGTGTACACTGACATGGGCAGGATTACGAAAATCATGGTTTAATATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS-3UTR CAA 90 bp GGAGTCTTAGCAGAGAGAAACTCTAAGACTAATTATTGGCTTCTAGGCATTTTAGTCCATCCGGCTTCTTaGGCATGGTTTCTTTTACGA +
Preference number: 5 (lower is better)
Translates to: GVLAERNSKTNYWLLGILVHPAS*AWFLLR
Trigger: TCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGAC...TAAAATGCCTAGAAGCCAATAATTAGTCTTAGAGTTTCTCTCTGCTAAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS TCA 72 bp CCCCATCGGCTTCCTCCTCACTCAGGGGTTCCTCCTTaGTCTGCACGCTGGGCAGGACTGTGGCTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: PHRLPPHSGVPP*SARWAGLWLPA
Trigger: TGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGAGTGAGGAGGAAGCCGATGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp CCCGCCCAGCAGGCAGCCCATTGGCCAACTTGGTGCTaGGGCAAGTGCTGGGTGCAGTGTCCATGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PAQQAAHWPTWC*GKCWVQCPWAP
Trigger: AGGAGCCCATGGACACTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCTGCCTGCTGGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp GGACTGCACGCGGCGCTGGCGAGCCTGCTCGGACTCTaGCCTGGAGAACCGTACCGTGATCTGCTTAACGTC +
Preference number: 6 (lower is better)
Translates to: GLHAALASLLGL*PGEPYRDLLNV
Trigger: GACGTTAAGCAGATCACGGTACGGTTCTCCAGGCCAGAGTCCGAGCAGGCTCGCCAGCGCCGCGTGCAGTCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 72 bp CCCACTGCCCGCCCAGCAGGCAGCCCATTGGCCAACTaGGTGCTGAGGCAAGTGCTGGGTGCAGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: PTARPAGSPLAN*VLRQVLGAVSM
Trigger: CATGGACACTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCTGCCTGCTGGGCGGGCAGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp TCGGCTTCCTCCTCACTCAGGGGTTCCTCCTTGATCTaGACGCTGGGCAGGACTGTGGCTGCCCGCATCTGC +
Preference number: 6 (lower is better)
Translates to: SASSSLRGSSLI*TLGRTVAARIC
Trigger: GCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAACCCCTGAGTGAGGAGGAAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 90 bp CCATTTAGGCTGTCCCCACCCACTGCCCGCCCAGCAGGCAGCCCATaGGCCAACTTGGTGCTGAGGCAAGTGCTGGGTGCAGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: PFRLSPPTARPAGSP*ANLVLRQVLGAVSM
Trigger: CATGGACACTGCACCCAGCACTTGCCTCAGCACCAAGTTGGCCAATGGGCTGCCTGCTGGGCGGGCAGTGGGTGGGGACAGCCTAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp ATCTGCACGCTGGGCAGGACTGTGGCTGCCCGCATCTaGTCCTTCCGTCGCTGCAGTTCACGCTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: ICTLGRTVAARI*SFRRCSSRSKK
Trigger: CTTCTTGGAGCGTGAACTGCAGCGACGGAAGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp TTCCTCCTTGATCTGCACGCTGGGCAGGACTGTGGCTaGCCGCATCTGCTCCTTCCGTCGCTGCAGTTCACG +
Preference number: 6 (lower is better)
Translates to: FLLDLHAGQDCG*PHLLLPSLQFT
Trigger: CGTGAACTGCAGCGACGGAAGGAGCAGATGCGGGCAGCCACAGTCCTGCCCAGCGTGCAGATCAAGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CTGAAGAGTATATGGCCCGGGGGCAGGCCTGCCAGGTaGAGGTTGAAGAGGCGCTTGAGTTCGCTCAGCGTG +
Preference number: 6 (lower is better)
Translates to: LKSIWPGGRPAR*RLKRRLSSLSV
Trigger: CACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp TTGACGAGCTCCGTGTTCTCTACCCCGCTGGATCCCTaGCACAGCAGGTACTGGCGCTCATGCTCTGAGCGG +
Preference number: 6 (lower is better)
Translates to: LTSSVFSTPLDP*HSRYWRSCSER
Trigger: CCGCTCAGAGCATGAGCGCCAGTACCTGCTGTGTCAGGGATCCAGCGGGGTAGAGAACACGGAGCTCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp GCACCGTATCCTGTAGCATTCGGTCTGAGACGCCACTaGAGAGTATATGGCCCGGGGGCAGGCCTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: APYPVAFGLRRH*RVYGPGAGLPG
Trigger: ACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACCGAATGCTACAGGATACGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp GCTAGTCTCGTCAGCACAGGCACCGTCCACGTTCAGTaGGATCTGCTCCCCTTTGCTGCGGCAGTAGTTGGG +
Preference number: 6 (lower is better)
Translates to: ASLVSTGTVHVQ*DLLPFAAAVVG
Trigger: CCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTGCCTGTGCTGACGAGACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp AGGACTGTGGCTGCCCGCATCTGCTCCTTCCGTCGCTaGAGTTCACGCTCCAAGAAGGCATGGTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: RTVAARICSFRR*SSRSKKAWFCW
Trigger: CCAGCAGAACCATGCCTTCTTGGAGCGTGAACTGCAGCGACGGAAGGAGCAGATGCGGGCAGCCACAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 90 bp CCACTGAAGAGTATATGGCCCGGGGGCAGGCCTGCCAGGTGCAGGTaGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTC +
Preference number: 6 (lower is better)
Translates to: PLKSIWPGGRPARCR*KRRLSSLSVSTNCL
Trigger: GAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp GGATCCCTGACACAGCAGGTACTGGCGCTCATGCTCTaGGCGGCTGTCCCTCATGCCATAGTAGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GSLTQQVLALML*AAVPHAIVVQV
Trigger: CACCTGCACTACTATGGCATGAGGGACAGCCGCTCAGAGCATGAGCGCCAGTACCTGCTGTGTCAGGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CACCGTCCACGTTCAGTGCGATCTGCTCCCCTTTGCTaGGGCAGTAGTTGGGATTCAGGGTGTCGATGGCCA +
Preference number: 6 (lower is better)
Translates to: HRPRSVRSAPLC*GSSWDSGCRWP
Trigger: TGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp AGGCACCGTCCACGTTCAGTGCGATCTGCTCCCCTTTaGTGCGGCAGTAGTTGGGATTCAGGGTGTCGATGG +
Preference number: 6 (lower is better)
Translates to: RHRPRSVRSAPL*CGSSWDSGCRW
Trigger: CCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGAACGTGGACGGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp GAAGCAGCAGTCTGTGGGGGAAAAGGCACCAGTATCTaGTTGCAGCCAGCGGCCAGCACCGTATCCTGTAGC +
Preference number: 6 (lower is better)
Translates to: EAAVCGGKGTSI*LQPAASTVSCS
Trigger: GCTACAGGATACGGTGCTGGCCGCTGGCTGCAAGCAGATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp TGTAGCATTCGGTCTGAGACGCCACTGAAGAGTATATaGCCCGGGGGCAGGCCTGCCAGGTGCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: CSIRSETPLKSI*PGGRPARCRLK
Trigger: CTTCAACCTGCACCTGGCAGGCCTGCCCCCGGGCCATATACTCTTCAGTGGCGTCTCAGACCGAATGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CTCATTGGCTGCCTCCCTCTCTCGGTGCTTGGCATCTaGCTTATCAAGGTAGGAGAAGCTGGGCCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LIGCLPLSVLGI*LIKVGEAGPKL
Trigger: CAGCTTCGGCCCAGCTTCTCCTACCTTGATAAGGCAGATGCCAAGCACCGAGAGAGGGAGGCAGCCAATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CAGCAGTCTGTGGGGGAAAAGGCACCAGTATCTGCTTaGAGCCAGCGGCCAGCACCGTATCCTGTAGCATTC +
Preference number: 6 (lower is better)
Translates to: QQSVGEKAPVSA*SQRPAPYPVAF
Trigger: GAATGCTACAGGATACGGTGCTGGCCGCTGGCTGCAAGCAGATACTGGTGCCTTTTCCCCCACAGACTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp GCCTGTAGAGTGCAGCGGCATAACGAGCTGTGTTGCTaGTGGTCTGGGAGGAGCAGAAGGTCTGCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: ACRVQRHNELCC*WSGRSRRSACP
Trigger: TGGACAAGCAGACCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTTATGCCGCTGCACTCTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 72 bp GGCGGCATGAGCATCATGAGGTATTCACTGGGTGACTaGACGAGCTCCGTGTTCTCTACCCCGCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: GGMSIMRYSLGD*TSSVFSTPLDP
Trigger: GGGATCCAGCGGGGTAGAGAACACGGAGCTCGTCAAGTCACCCAGTGAATACCTCATGATGCTCATGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CCCAGTTTCCTTGGACTAACATCGCCACCTTCTGGATaGCACGTAGAACAGCCACAGAGTCCACAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: PSFLGLTSPPSG*HVEQPQSPQRG
Trigger: GCCCCTCTGTGGACTCTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTTAGTCCAAGGAAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp TTGGCCTGGATGCCCGACCACAGCATGTGCTGCCGCTaGACCACATCTGGATGCTTCTTGATAAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: LAWMPDHSMCCR*TTSGCFLINSR
Trigger: CCTGGAGTTTATCAAGAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGGCATCCAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp ACCGTGATCTGCTTAACGTCTTCTTCTGCCTCGTCCTaGGAAGAATCCCCTGCCTCATTGGCTGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: TVICLTSSSASS*EESPASLAASL
Trigger: GAGGGAGGCAGCCAATGAGGCAGGGGATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAGCAGATCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp GTCCTTCACATCCTCAGCGCAGAGTTTGGTCACTGCTaGCACCTCCTTTCTTACCACCCATCGGCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: VLHILSAEFGHC*HLLSYHPSALC
Trigger: ACACAGAGCCGATGGGTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGGATGTGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp TCAGTGCGATCTGCTCCCCTTTGCTGCGGCAGTAGTTaGGATTCAGGGTGTCGATGGCCATCTCAAGCTCTA +
Preference number: 6 (lower is better)
Translates to: SVRSAPLCCGSS*DSGCRWPSQAL
Trigger: TAGAGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp TGTAGAGTGCAGCGGCATAACGAGCTGTGTTGCTGGTaGTCTGGGAGGAGCAGAAGGTCTGCTTGTCCATCA +
Preference number: 6 (lower is better)
Translates to: CRVQRHNELCCW*SGRSRRSACPS
Trigger: TGATGGACAAGCAGACCTTCTGCTCCTCCCAGACCACCAGCAACACAGCTCGTTATGCCGCTGCACTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp CCACAAAAGCCTTCAGTTCACAGGCAACCGGGTTGCTaGCACAGCCTGGAACTGGGTGTCCATTTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: PQKPSVHRQPGC*HSLELGVHLGC
Trigger: ACAGCCTAAATGGACACCCAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGAACTGAAGGCTTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 72 bp GCTTCCACAAAAGCCTTCAGTTCACAGGCAACCGGGTaGCTGGCACAGCCTGGAACTGGGTGTCCATTTAGG +
Preference number: 6 (lower is better)
Translates to: ASTKAFSSQATG*LAQPGTGCPFR
Trigger: CCTAAATGGACACCCAGTTCCAGGCTGTGCCAGCAACCCGGTTGCCTGTGAACTGAAGGCTTTTGTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 90 bp ACAGCCATGTGCTCCAGAAAGTCCTTCACATCCTCAGCGCAGAGTTaGGTCACTGCTGCCACCTCCTTTCTTACCACCCATCGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: TAMCSRKSFTSSAQS*VTAATSFLTTHRLC
Trigger: ACAGAGCCGATGGGTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGGATGTGAAGGACTTTCTGGAGCACATGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS TCA 72 bp CTGGGAGGAGCAGAAGGTCTGCTTGTCCATCAGCTTTaGGGAATATGTGCTAGTCTCGTCAGCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: LGGAEGLLVHQL*GICASLVSTGT
Trigger: GGTGCCTGTGCTGACGAGACTAGCACATATTCCTCAAAGCTGATGGACAAGCAGACCTTCTGCTCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp TATCAAGGTAGGAGAAGCTGGGCCGAAGCTGTAGGATaGCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCC +
Preference number: 6 (lower is better)
Translates to: YQGRRSWAEAVG*HVKVSGGAHLA
Trigger: GGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp GGAGAACCGTACCGTGATCTGCTTAACGTCTTCTTCTaGCTCGTCCTGAGAAGAATCCCCTGCCTCATTGGC +
Preference number: 6 (lower is better)
Translates to: GEPYRDLLNVFF*LVLRRIPCLIG
Trigger: GCCAATGAGGCAGGGGATTCTTCTCAGGACGAGGCAGAAGAAGACGTTAAGCAGATCACGGTACGGTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp CTTTGCTGCGGCAGTAGTTGGGATTCAGGGTGTCGATaGCCATCTCAAGCTCTACCTTCTGCTGTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: LCCGSSWDSGCR*PSQALPSAVWA
Trigger: AGCCCAAACAGCAGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
CDS CCA 72 bp ACCACCCAGTTTCCTTGGACTAACATCGCCACCTTCTaGATGCCACGTAGAACAGCCACAGAGTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: TTQFPWTNIATF*MPRRTATESTE
Trigger: CTCTGTGGACTCTGTGGCTGTTCTACGTGGCATCCAGAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp GGTGCTTGGCATCTGCCTTATCAAGGTAGGAGAAGCTaGGCCGAAGCTGTAGGATGCCATGTAAAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: GAWHLPYQGRRS*AEAVGCHVKVS
Trigger: TGACACCTTTACATGGCATCCTACAGCTTCGGCCCAGCTTCTCCTACCTTGATAAGGCAGATGCCAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CAA 72 bp TGCTCCAGAAAGTCCTTCACATCCTCAGCGCAGAGTTaGGTCACTGCTGCCACCTCCTTTCTTACCACCCAT +
Preference number: 6 (lower is better)
Translates to: CSRKSFTSSAQS*VTAATSFLTTH
Trigger: ATGGGTGGTAAGAAAGGAGGTGGCAGCAGTGACCAAACTCTGCGCTGAGGATGTGAAGGACTTTCTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CATGCCATAGTAGTGCAGGTGGACCCAGGGTTCTTCTaGATGCTTCTTCTGCAAGAACTCATAGGACTGCAC +
Preference number: 6 (lower is better)
Translates to: HAIVVQVDPGFF*MLLLQELIGLH
Trigger: GTGCAGTCCTATGAGTTCTTGCAGAAGAAGCATGCAGAAGAACCCTGGGTCCACCTGCACTACTATGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp TTTTCTAATTTGGCCTGGATGCCCGACCACAGCATGTaGTGCCGCTGGACCACATCTGGATGCTTCTTGATA +
Preference number: 6 (lower is better)
Translates to: FSNLAWMPDHSM*CRWTTSGCFLI
Trigger: TATCAAGAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGGCATCCAGGCCAAATTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp CTTTGCTGCGGCAGTAGTTGGGATTCAGGGTGTCGATaGCCATCTCAAGCTCTACCTGAAAGAGATACAGCT +
Preference number: 6 (lower is better)
Translates to: LCCGSSWDSGCR*PSQALPERDTA
Trigger: AGCTGTATCTCTTTCAGGTAGAGCTTGAGATGGCCATCGACACCCTGAATCCCAACTACTGCCGCAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207481.2
CDS TCA 72 bp GGCATGACTTTCACGTTCTTCATCAGGACCTTAATCTaGTCAGCCAGAGGCAATGTACGCAGCTGGGCCATA +
Preference number: 6 (lower is better)
Translates to: GMTFTFFIRTLI*SARGNVRSWAI
Trigger: TATGGCCCAGCTGCGTACATTGCCTCTGGCTGATCAGATTAAGGTCCTGATGAAGAACGTGAAAGTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp AACTCCCAGCCTTTGTTGATTCTCACTACAGCCATGTaGTCCAGAAAGTCCTTCACATCCTCAGCGCAGAGT +
Preference number: 6 (lower is better)
Translates to: NSQPLLILTTAM*SRKSFTSSAQS
Trigger: ACTCTGCGCTGAGGATGTGAAGGACTTTCTGGAGCACATGGCTGTAGTGAGAATCAACAAAGGCTGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS CCA 72 bp GGATACAGGATGTCACTCTTTACCACCCAGTTTCCTTaGACTAACATCGCCACCTTCTGGATGCCACGTAGA +
Preference number: 6 (lower is better)
Translates to: GYRMSLFTTQFP*TNIATFWMPRR
Trigger: TCTACGTGGCATCCAGAAGGTGGCGATGTTAGTCCAAGGAAACTGGGTGGTAAAGAGTGACATCCTGTATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp TTACGAGATTATAGACTTTTTCTAATTTGGCCTGGATaGCCGACCACAGCATGTGCTGCCGCTGGACCACAT +
Preference number: 6 (lower is better)
Translates to: LRDYRLFLIWPG*PTTACAAAGPH
Trigger: ATGTGGTCCAGCGGCAGCACATGCTGTGGTCGGGCATCCAGGCCAAATTAGAAAAAGTCTATAATCTCGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2
CDS GCA 72 bp CATCTCAAGCTCTACCTGAAAGAGATACAGCTTCTCTaGCAGACTTTTAGCCAAGTACACATCGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: HLKLYLKEIQLL*QTFSQVHIDLL
Trigger: CAGGAGATCGATGTGTACTTGGCTAAAAGTCTGGCAGAGAAGCTGTATCTCTTTCAGGTAGAGCTTGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207481.2
CDS CAA 72 bp CCAGACCAACAGGCGCTGATTGTCCATCCGGCTTCTTaGGCATGGTTTCTTTTACGAGATTATAGACTTTTT +
Preference number: 6 (lower is better)
Translates to: PDQQALIVHPAS*AWFLLRDYRLF
Trigger: AAAAAGTCTATAATCTCGTAAAAGAAACCATGCCAAAGAAGCCGGATGGACAATCAGCGCCTGTTGGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033173.15
ENSMUST00000106483.4
ENSMUST00000207481.2