Pregenerated sensors for POLR3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034453Ensembl transcript IDs: ENSMUST00000077175.7, ENSMUST00000215853.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCTCTTCTTCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATaGGCACAGAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: FLFFLLLLCLLREAE*AQKSPRAPCLRLYR Trigger: CCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGAAGAAGAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 90 bp | CCTCTCCTTCTTCCTCTTCTTCCTCCTCCTCCTCTGCCTCCTCCGTaGAGCAGAATGAGCACAGAAGTCACCGAGAGCCCCCTGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PLLLPLLPPPPLPPP*SRMSTEVTESPLPQ Trigger: CTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGAAGAAGAGGAAGAAGGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR GCA 90 bp | CAAGGGTGTCAAGCCAGCCTCTGGACCTCAGACAGCTGCTGCTGCTaGTCCTCTTCCTCCTCTCCTTCATTCTCTTCCTCCTCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: QGCQASLWTSDSCCC*SSSSSPSFSSSSSP Trigger: AGGAGAGGAGGAGGAAGAGAATGAAGGAGAGGAGGAAGAGGAGCAGCAGCAGCAGCTGTCTGAGGTCCAGAGGCTGGCTTGACACCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR GCA 90 bp | GGTACTCTCTCTAGCTTGTGTCCATCTGTGTGTGACTCCACTCAGTaGTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATC | + |
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Preference number: 1 (lower is better) Translates to: GTLSSLCPSVCDSTQ*CAGPSTSYGFRLQI Trigger: GATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGTGGAGTCACACACAGATGGACACAAGCTAGAGAGAGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 90 bp | CTTCCCACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTaGATGTGTGTGTGGAGGCCAGAGGGACACTGGGGTCCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPTSAKVVPTHLPIL*MCVWRPEGHWGPPQ Trigger: CTGAGGAGGACCCCAGTGTCCCTCTGGCCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 90 bp | GCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTaGAGGCCAGAGGGACACTGGGGTCCTCCTCAGTCACTGTTCACA | + |
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Preference number: 1 (lower is better) Translates to: AKVVPTHLPILWMCV*RPEGHWGPPQSLFT Trigger: TGTGAACAGTGACTGAGGAGGACCCCAGTGTCCCTCTGGCCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 90 bp | CCGTTGGTAATCTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTaGGCTGCTCTCTGTTTAGGAATCACTTGGTCTGCAATCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PLVIWSWRMCLTTSN*AALCLGITWSAIFF Trigger: GAAGAAGATTGCAGACCAAGTGATTCCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| 3UTR CCA 90 bp | TGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTAGGAATCACTTaGTCTGCAATCTTCTTCATTTCTGAATTAAACTTTTTAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: CLTTSNWAALCLGIT*SAIFFISELNFLNK Trigger: TTTGTTTAAAAAGTTTAATTCAGAAATGAAGAAGATTGCAGACCAAGTGATTCCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGGAGGCCAGAGGGACACTGGGGTCCTCCTCAGTCACTGTTCACACTACCTCAGACAGCTGCTaGTGCTGCTCCTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VCVEARGTLGSSSVTVHTTSDSC*CCSSSS Trigger: GGAGGAAGAGGAGCAGCAGCAGCAGCTGTCTGAGGT...AGTGTGAACAGTGACTGAGGAGGACCCCAGTGTCCCTCTGGCCTCCACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CAA 90 bp | TCTTCCCACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTaGGATGTGTGTGTGGAGGCCAGAGGGACACTGGGGTCCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSHLSKSCAHTSTHS*DVCVEARGTLGSSS Trigger: TGAGGAGGACCCCAGTGTCCCTCTGGCCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGGCAGGAGAATTGAGGTaGGTTCAAATCCCACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LTFTGVLGATPSPYMGCWAGELR*VQIPPG Trigger: CCCAGGTGGGATTTGAACTCACCTCAATTCTCCTGC...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGCAACAGGCCCTTGACTaGGCTAACTTCTCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTFTGVLGATPSPYMGCWQQALD*ANFSVP Trigger: TGGGACTGAGAAGTTAGCTCAGTCAAGGGCCTGTTG...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGTGTGACTCCACTCAGTaGTGTGCGGGGCCCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: HLSKSCAHTSTHSLDVCVCDSTQ*CAGPST Trigger: GGTGCTGGGCCCCGCACAGCACTGAGTGGAGTCACA...CACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR GCA 90 bp | ACAACAAAATTAATAGGCGTTGGTACTCTCTCTAGCTTGTGTCCATCTGTGTGTTCACCGAGAGCCCCCTaGCTCAGGCTGTACAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: TTKLIGVGTLSSLCPSVCSPRAP*LRLYRP Trigger: CGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGA...ACACACAGATGGACACAAGCTAGAGAGAGTACCAACGCCTATTAATTTTGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTCCTCTGCCTCCTCCGTaGAGCAGAATGAGCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: WSQGTTVKNKLREWTANFPLPPP*SRMSTE Trigger: TTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGG...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTCCACCTGGGATAGAGTaGGACTCCCACTCAACACAA | + |
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Preference number: 2 (lower is better) Translates to: WSQGTTVKNKLREWTANFPPGIE*DSHSTQ Trigger: TTGTGTTGAGTGGGAGTCTCACTCTATCCCAGGTGG...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTCCTTACATGGGTTGTTaGGGGGTGAACTCAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: WSQGTTVKNKLREWTANFPYMGC*GVNSGH Trigger: ATGACCTGAGTTCACCCCCCAACAACCCATGTAAGG...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CCA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACATGTCAAGCCAGCCTCTaGACCTCAGACAGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: NTSPYKHLSGARAQQLRTCQASL*TSDSCC Trigger: GCAGCAGCTGTCTGAGGTCCAGAGGCTGGCTTGACA...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR GCA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACATTCCTCCTCCTCCTCTaGCTCCTCCGTGAAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: NTSPYKHLSGARAQQLRTFLLLL*LLREAE Trigger: TTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGAA...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACCTTTGGATGTGTGTGTaGAGGCCAGAGGGACACTGG | + |
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Preference number: 2 (lower is better) Translates to: CHIFIVKKTNRVESLSRDLWMCV*RPEGHW Trigger: CCAGTGTCCCTCTGGCCTCCACACACACATCCAAAG...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTCAAACCAGATATGCTTaGCTCATATCCATGATTCCA | + |
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Preference number: 2 (lower is better) Translates to: WSQGTTVKNKLREWTANFQTRYA*LISMIP Trigger: TGGAATCATGGATATGAGCCAAGCATATCTGGTTTG...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACATCAAGATCGATGTCTaGGCAAGCTCTGACTCACAA | + |
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Preference number: 2 (lower is better) Translates to: CHIFIVKKTNRVESLSRDIKIDV*ASSDSQ Trigger: TTGTGAGTCAGAGCTTGCTCAGACATCGATCTTGAT...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR GCA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACAGTCACAAATGTCACTTaGTGTCCTCTGAGAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: NTSPYKHLSGARAQQLRTVTNVT*CPLRES Trigger: ACTTTCTCTCAGAGGACAGCAAGTGACATTTGTGAC...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 72 bp | CTCCACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATaGCTTCAGGCTCCAGATCAAGGGTGTCAAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LHSVLCGAQHLL*LQAPDQGCQAS Trigger: GCTGGCTTGACACCCTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 72 bp | TTCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATaGGCACAGAAGTCACCGAGAGCCCCCTGCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: FLLLLCLLREAE*AQKSPRAPCLR Trigger: CCTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR GCA 72 bp | TCTAGCTTGTGTCCATCTGTGTGTGACTCCACTCAGTaGTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLCPSVCDSTQ*CAGPSTSYGFR Trigger: CCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGTGGAGTCACACACAGATGGACACAAGCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 72 bp | CTGGGGTCCTCCTCAGTCACTGTTCACACTAGCCCTTaGCACAGGGGTCCCTCATTGAACCTGAATTGCACT | + |
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Preference number: 3 (lower is better) Translates to: LGSSSVTVHTSP*HRGPSLNLNCT Trigger: AGTGCAATTCAGGTTCAATGAGGGACCCCTGTGTCAAGGGCTAGTGTGAACAGTGACTGAGGAGGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 72 bp | GAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTTaGCGCATGTGTTTAACGACGTCAAACTGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: EMALTMPLVIWS*RMCLTTSNWAA Trigger: AGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| 3UTR TCA 72 bp | CCGCACACTCAATGCTGCTGGGGCACACTCTCTCTCTaGACACTTCTCCATATAAACATTTATCTGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PHTQCCWGTLSL*TLLHINIYLEP Trigger: TGGCTCCAGATAAATGTTTATATGGAGAAGTGTTCAGAGAGAGAGTGTGCCCCAGCAGCATTGAGTGTGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 72 bp | GCTCTGACTCACAATGTGACAGCAGACTGTGACTGCTaGTCTTTCAGAGTCACAAATGTCACTTGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ALTHNVTADCDC*SFRVTNVTCCP Trigger: AGGACAGCAAGTGACATTTGTGACTCTGAAAGACCAGCAGTCACAGTCTGCTGTCACATTGTGAGTCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 72 bp | ATCTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTaGGCTGCTCTCTGTTTAGGAATCACTTGGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: IWSWRMCLTTSN*AALCLGITWSA Trigger: TGCAGACCAAGTGATTCCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGTTTACTTCTTCCCACCTCAGCAAAAGTTGTGCCCACACATCTACCCATCACAGGGGTCCCTCATaGAACCTGAATTGCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: RKFTSSHLSKSCAHTSTHHRGPS*NLNCTD Trigger: GTCAGTGCAATTCAGGTTCAATGAGGGACCCCTGTG...ATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTGGGAAGAAGTAAACTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR GCA 72 bp | CAAGCTCTGACTCACAATGTGACAGCAGACTGTGACTaGTGGTCTTTCAGAGTCACAAATGTCACTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QALTHNVTADCD*WSFRVTNVTCC Trigger: ACAGCAAGTGACATTTGTGACTCTGAAAGACCAGCAGTCACAGTCTGCTGTCACATTGTGAGTCAGAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 72 bp | AGACTTCACAGATCACATTCCATCAAGATCGATGTCTaGGCAAGCTCTGACTCACAATGTGACAGCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: RLHRSHSIKIDV*ASSDSQCDSRL Trigger: CAGTCTGCTGTCACATTGTGAGTCAGAGCTTGCTCAGACATCGATCTTGATGGAATGTGATCTGTGAAGTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR GCA 72 bp | TGTGACTGCTGGTCTTTCAGAGTCACAAATGTCACTTaGTGTCCTCTGAGAGAAAGTTTACTTCTTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: CDCWSFRVTNVT*CPLRESLLLPT Trigger: GGTGGGAAGAAGTAAACTTTCTCTCAGAGGACAGCAAGTGACATTTGTGACTCTGAAAGACCAGCAGTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CCA 72 bp | AAAGGCAGGAGAATTGAGGTGAGTTCAAATCCCACCTaGGATAGAGTGAGACTCCCACTCAACACAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: KGRRIEVSSNPT*DRVRLPLNTNK Trigger: TTTGTTTGTGTTGAGTGGGAGTCTCACTCTATCCCAGGTGGGATTTGAACTCACCTCAATTCTCCTGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CAA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACACCACCTCAGCAAAAGTaGTGCCCACACATCTACCCA | + |
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Preference number: 3 (lower is better) Translates to: NTSPYKHLSGARAQQLRTPPQQK*CPHIYP Trigger: TGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTGG...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 72 bp | GGTCTTTCAGAGTCACAAATGTCACTTGCTGTCCTCTaGGAGAAAGTTTACTTCTTCCCACCTCAGCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GLSESQMSLAVL*EKVYFFPPQQK Trigger: CTTTTGCTGAGGTGGGAAGAAGTAAACTTTCTCTCAGAGGACAGCAAGTGACATTTGTGACTCTGAAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR TCA 72 bp | AACATAAACAAACCAGATATGCTTGGCTCATATCCATaGTTCCAGCACTTGTGGGAGACAAAGGCAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: NINKPDMLGSYP*FQHLWETKAGE Trigger: TTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCAAGCATATCTGGTTTGTTTATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR-3UTR CAA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACACAAACCAGATATGCTaGGCTCATATCCATGATTCC | + |
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Preference number: 3 (lower is better) Translates to: CHIFIVKKTNRVESLSRDTNQIC*AHIHDS Trigger: GGAATCATGGATATGAGCCAAGCATATCTGGTTTGT...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACTGCAGGCATACGGGATaGGGAGGGAGGACACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHCRHTG*GGRTRG Trigger: GCCACGTGTCCTCCCTCCGCATCCCGTATGCCTGCA...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACAAGCGAGACAGCACCTaGGTCACACCCTGTCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHKRDST*VTPCRS Trigger: GGACCGACAGGGTGTGACCCAGGTGCTGTCTCGCTT...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCTCAGACGGCACTCATaGGGGGACACTGGTCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHLRRHS*GDTGLV Trigger: AACTAGACCAGTGTCCCCTCATGAGTGCCGTCTGAG...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCGTGTGGGTTCATTATaGTGTCGGGACAGATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHRVGSL*CRDRCQ Trigger: CTGGCATCTGTCCCGACATCATAATGAACCCACACG...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACTCCAACCGTCATTCTTaGTGGGAAGCCGTGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHSNRHS*WEAVWV Trigger: AACCCACACGGCTTCCCATCAAGAATGACGGTTGGA...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGGAGGCCAGAGGGACACTGGGGTCCTCCTCAGTCACTGTTCACACTATCGGCGCAGTCAGCTaGTCCGGAGTCAGGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCVEARGTLGSSSVTVHTIGAVS*SGVRLP Trigger: CGGGAGCCTGACTCCGGAGCAGCTGACTGCGCCGAT...AGTGTGAACAGTGACTGAGGAGGACCCCAGTGTCCCTCTGGCCTCCACACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | AAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCTCTGTTCCAATCATCTaGACGATTTCCTGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: KSPRAPCLRLYRPSADCTSVPII*TISWSL Trigger: GAGTGACCAGGAAATCGTGCAGATGATTGGAACAGA...GGTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACTTCCACTTTCTCACCTaGAGAACAAATGCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHFHFLT*RTNAIC Trigger: GCAGATGGCATTTGTTCTCCAGGTGAGAAAGTGGAA...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | CACTCCCTCCTCAGCCTCATCCGCACACTCAATGCTGCTGGGGCACACTCTCTCATCTGGGTGAAGATCTaGGCTTTCTGGCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLLSLIRTLNAAGAHSLIWVKI*AFWHSS Trigger: GGAGGAGTGCCAGAAAGCTCAGATCTTCACCCAGAT...GAGAGAGTGTGCCCCAGCAGCATTGAGTGTGCGGATGAGGCTGAGGAGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCTGACAAGCTTTTTATaGTCTCGAATGACACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHLTSFL*SRMTPR Trigger: CCTTGGTGTCATTCGAGACCATAAAAAGCTTGTCAG...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATGAGCACAGAAGTCACCGAAACGGCATGTCTTCCTaGGGGACGATCAGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSASSVKQNEHRSHRNGMSS*GTIRPQ Trigger: CTGTGGCCTGATCGTCCCCCAGGAAGACATGCCGTT...TCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | AGGCCAGAGGGACACTGGGGTCCTCCTCAGTCACTGTTCACACTAGCCCTTGACATGCCTGCATCTGGGTaGAGATCTGAGCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPEGHWGPPQSLFTLALDMPASG*RSELSG Trigger: GCCAGAAAGCTCAGATCTTCACCCAGATGCAGGCAT...GTCAAGGGCTAGTGTGAACAGTGACTGAGGAGGACCCCAGTGTCCCTCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | AAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCTTTTATGGTCTCGAATaGCACCAAGGATGTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPRAPCLRLYRPSADCTFYGLE*HQGCYH Trigger: ATGGTAACATCCTTGGTGTCATTCGAGACCATAAAA...GGTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGATCTGCACGATTTCCTaGTCACTCTCCACACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKICTIS*SLSTPM Trigger: CATGGGTGTGGAGAGTGACCAGGAAATCGTGCAGAT...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGTCCTTCACTGGTACGTaGGTCAGAATGGTAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKSFTGT*VRMVEA Trigger: GGCTTCTACCATTCTGACCCACGTACCAGTGAAGGA...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACTATCAAAGGTCTGATTaGTGTATCGTTTCAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTESPLPQAVQAVGRLHYQRSD*CIVSRC Trigger: GCACCTTGAAACGATACACCAATCAGACCTTTGATA...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CAGAATGAGCACAGAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCCTTCGCACCATCACTaGAGTGTAGATACACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNEHRSHREPPASGCTGRPSHHH*SVDTLS Trigger: GCTAAGTGTATCTACACTGCAGTGATGGTGCGAAGG...ACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CACTCCCTCCTCAGCCTCATCCGCACACTCAATGCTGCTGGGGCACACTCTCTCGCCAACTCTTCCATGTaGTTATTTGTGACAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLLSLIRTLNAAGAHSLANSSM*LFVTAG Trigger: GCCAGCTGTCACAAATAAGCACATGGAAGAGTTGGC...GAGAGAGTGTGCCCCAGCAGCATTGAGTGTGCGGATGAGGCTGAGGAGGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGGTTGCTGTGGCACGTTaGTCCCTTCCAAAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTGVLGATPSPYMGCWVAVAR*SLPKES Trigger: AGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAAC...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TGGCTCATATCCATGATTCCAGCACTTGTGGGAGACAAAGGCAGGAGAATTGAGCCTCGGGCCCGGGCGTaGATTTTATCCAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: WLISMIPALVGDKGRRIEPRARA*ILSSTM Trigger: CATGGTGCTGGATAAAATGCACGCCCGGGCCCGAGG...CTCAATTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGGTTTCACGGCCATGTTaGTTCTGCTTTTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKVSRPC*FCFSSH Trigger: ATGAGAAGAAAAGCAGAACCAACATGGCCGTGAAAC...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CAA 72 bp | GGAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTaGGCGCATGTGTTTAACGACGTCAAACTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGIDHAVGNLV*AHVFNDVKLGC Trigger: GCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATGAGCACAGAAGTCACCGAAAACACCAAGCAGAGTaGAGGGTTCAATCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSASSVKQNEHRSHRKHQAE*RVQSPS Trigger: ACTTGGAGATTGAACCCTTCACTCTGCTTGGTGTTT...TCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGCCTGGAAGAGCAGCTTaGAGGCATACGGGATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLSKSCAHTSTHSLDVCVPGRAA*RHTGCG Trigger: TCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGG...CACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AGAGATAAGAGCGAGGCCTTTCCTCCCGCTGAAGGCAGACGCACCATTGAGAAATCCTTCACTGGTACGTaGGTCAGAATGGTAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDKSEAFPPAEGRRTIEKSFTGT*VRMVEA Trigger: GGCTTCTACCATTCTGACCCACGTACCAGTGAAGGA...TTTCTCAATGGTGCGTCTGCCTTCAGCGGGAGGAAAGGCCTCGCTCTTATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATGAGCACAGAAGTCACCGATTGGTAATCTGGTCTTaGCGCATGTGTTTAACGACG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSASSVKQNEHRSHRLVIWS*RMCLTT Trigger: CGTCGTTAAACACATGCGCCAAGACCAGATTACCAA...TCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AGAAGTAGGAGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGGGTAAGGACAGCTCGTaGTCCTCGGGCCCGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRRRVLKGRLHRSHSIKGKDSS*SSGPGV Trigger: CACGCCCGGGCCCGAGGACCACGAGCTGTCCTTACC...CTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCTCCTACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | ATGGCATTGACCATGCCGTTGGTAATCTGGTCTTGGCGCATGTGTTTAACGACGATCTGGGTGAAGATCTaGGCTTTCTGGCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MALTMPLVIWSWRMCLTTIWVKI*AFWHSS Trigger: GGAGGAGTGCCAGAAAGCTCAGATCTTCACCCAGAT...CGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGCTCATGAGGGGACACTaGTCTAGTTACATTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTGVLGATPSPYMGCWLMRGH*SSYIEA Trigger: AGCTTCAATGTAACTAGACCAGTGTCCCCTCATGAG...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGACACCCTTTTGTCCATaGCGACTGCTGAATTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTGVLGATPSPYMGCWTPFCP*RLLNLS Trigger: AGACAAATTCAGCAGTCGCCATGGACAAAAGGGTGT...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTAGGAATGCAGCCATCACGTaGTCCTCTGTTCCAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVLAHVFNDVKLGCSLFRNAAIT*SSVPII Trigger: GATGATTGGAACAGAGGAGCACGTGATGGCTGCATT...CCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTTGTCGGCCTCCACAATaGTCCTGTTCTTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSQGTTVKNKLREWTANFCRPPQ*SCSWTA Trigger: AGCTGTCCAAGAACAGGATCATTGTGGAGGCCGACA...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTAGGAATCCGGCCATGTTGGTTCTaGTTTTCTTCTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWRMCLTTSNWAALCLGIRPCWF*FSSHGW Trigger: CCACCCATGAGAAGAAAAGCAGAACCAACATGGCCG...GATTCCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR GCA 90 bp | AAACTGGGCTGCTCTCTGTTTAGGAATCACTTGGTCTGCAATCTTCTTCATTTCCAAGCTGGGCCCAAATaGAGCCATCACGTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLGCSLFRNHLVCNLLHFQAGPK*SHHVLL Trigger: GAGGAGCACGTGATGGCTGCATTTGGGCCCAGCTTG...GAAATGAAGAAGATTGCAGACCAAGTGATTCCTAAACAGAGAGCAGCCCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR GCA 90 bp | GTAATCTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTCCTTCGCACCATCACTaGAGTGTAGATACACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIWSWRMCLTTSNWAALCPSHHH*SVDTLS Trigger: GCTAAGTGTATCTACACTGCAGTGATGGTGCGAAGG...ACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | GGAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTTGGCGCATGTGTTTAACCTGCTTTTCTTCTCATaGGTGGAGCTGGTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDGIDHAVGNLVLAHVFNLLFFS*VELVTE Trigger: CTCAGTTACCAGCTCCACCCATGAGAAGAAAAGCAG...GTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAGAGATAAGAGCGAGGCCTTTCCTCCCGCTGAAGGCAGACGCACCATTGGTTTCACGGCCATGTTaGTTCTGCTTTTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEEIRARPFLPLKADAPLVSRPC*FCFSSH Trigger: ATGAGAAGAAAAGCAGAACCAACATGGCCGTGAAAC...CAATGGTGCGTCTGCCTTCAGCGGGAGGAAAGGCCTCGCTCTTATCTCTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTGTTGTGATGAGGGTATaGGATCAGGCCGGCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGTTVKNKLREWTANFVVMRV*DQAGTN Trigger: GTTTGTGCCGGCCTGATCCCATACCCTCATCACAAC...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | GAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTTGGCGCATGTGTTTAACGTCTGTTCCAATCATCTaGACGATTTCCTGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EMALTMPLVIWSWRMCLTSVPII*TISWSL Trigger: GAGTGACCAGGAAATCGTGCAGATGATTGGAACAGA...CGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAGGAGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGCAAGCTGGGCCCAAATaGAGCCATCACGTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSRRRVLKGRLHRSHSIKQAGPK*SHHVLL Trigger: GAGGAGCACGTGATGGCTGCATTTGGGCCCAGCTTG...CTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCTCCTACTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCCTCCTCTGCCTCCTCCGTGAAGCAGAATGAGCACAGAAGTCACCGATGTTTAGGAATCACTTaGTCTGCAATCTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSASSVKQNEHRSHRCLGIT*SAIFFI Trigger: AATGAAGAAGATTGCAGACCAAGTGATTCCTAAACA...TCGGTGACTTCTGTGCTCATTCTGCTTCACGGAGGAGGCAGAGGAGGAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | TGGCTCATATCCATGATTCCAGCACTTGTGGGAGACAAAGGCAGGAGAATTGAGCTGGTAGGTGTTTCTTaGAGACTGGTTGTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLISMIPALVGDKGRRIELVGVS*RLVVMR Trigger: CCTCATCACAACCAGTCTCCAAGAAACACCTACCAG...CTCAATTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | CACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGGTTGATTGTAGCCAATaGTACCCATGGCTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSKSCAHTSTHSLDVCVVDCSQ*YPWLAC Trigger: GCAAGCAAGCCATGGGTACCATTGGCTACAATCAAC...CACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTAGGATGAAAATGCTGTCCTaGCAATTCCAGTCGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLAHVFNDVKLGCSLFRMKMLS*QFQSFV Trigger: AACAAACGACTGGAATTGGCAGGACAGCATTTTCAT...CCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CCA 90 bp | TCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGGAGGATGCCGTTGGTAATCTaGTCTTGGCGCATGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SAKVVPTHLPILWMCVWRMPLVI*SWRMCL Trigger: TAAACACATGCGCCAAGACCAGATTACCAACGGCAT...CCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCTTTGTCTCCAATCTCTaGGCGCCGCGTCTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVFVSNL*APRLSQ Trigger: CTGAGACAGACGCGGCGCCCAGAGATTGGAGACAAA...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| 3UTR CAA 72 bp | GGGGGTGAACTCAGGTCATACTTATGCAACAGGCCCTaGACTGAGCTAACTTCTCAGTCCCAATTCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGELRSYLCNRP*TELTSQSQFKQ Trigger: TTGTTTGAATTGGGACTGAGAAGTTAGCTCAGTCAAGGGCCTGTTGCATAAGTATGACCTGAGTTCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCCAATGGGTAAGGCGTTaGGGATTATCCTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVQWVRR*GLSSGC Trigger: GCAGCCAGAGGATAATCCGCAACGCCTTACCCATTG...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | CACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGCCCTATATACTTCAATaGCTGCATCTGGGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLSKSCAHTSTHSLDVCVPYILQ*LHLGED Trigger: ATCTTCACCCAGATGCAGGCATTGAAGTATATAGGG...CACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTAGGAATCCCCTATATACTTCAATaGCTGCATCTGGGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWRMCLTTSNWAALCLGIPYILQ*LHLGED Trigger: ATCTTCACCCAGATGCAGGCATTGAAGTATATAGGG...GATTCCTAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGGGCTGCTCTCTGTTTAGGAATCACTTGGTCTGCAATCTTCTTCATTTCATCTGCACGATTTCCTaGTCACTCTCCACACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLGCSLFRNHLVCNLLHFICTIS*SLSTPM Trigger: CATGGGTGTGGAGAGTGACCAGGAAATCGTGCAGAT...GAAATGAAGAAGATTGCAGACCAAGTGATTCCTAAACAGAGAGCAGCCCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGATTCTGTTAGCTAGAAGACCTCAGAGGAAATTTAAAGGAAGAAGGTTTCGGCCATGTTGGTTCTaGTTTTCTTCTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRILLARRPQRKFKGRRFRPCWF*FSSHGW Trigger: CCACCCATGAGAAGAAAAGCAGAACCAACATGGCCG...AAACCTTCTTCCTTTAAATTTCCTCTGAGGTCTTCTAGCTAACAGAATCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR GCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACATGGTACCCATGGCTTaGTTGCCCATAGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHIFIVKKTNRVESLSRDMVPMA*LPIAHW Trigger: CCAGTGTGCTATGGGCAAGCAAGCCATGGGTACCAT...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCTGGGCATTCTGCCAATaGGTAAGGCGTTGCGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVWAFCQ*VRRCGL Trigger: TAATCCGCAACGCCTTACCCATTGGCAGAATGCCCA...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCATACTGTGGTTGCTGTaGCACGTTGCTCCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVILWLL*HVAPFQ Trigger: TTGGAAGGGAGCAACGTGCCACAGCAACCACAGTAT...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCGAGTGCAGATATATATaGCAAGCGAGACAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVECRYI*QARQHL Trigger: CAGGTGCTGTCTCGCTTGTCATATATATCTGCACTC...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | ACAACAAAATTAATAGGCGTTGGTACTCTCTCTAGCTTGTGTCCATCTGTGTGTAATGCAGCCATCACGTaGTCCTCTGTTCCAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTKLIGVGTLSSLCPSVCNAAIT*SSVPII Trigger: GATGATTGGAACAGAGGAGCACGTGATGGCTGCATT...ACACACAGATGGACACAAGCTAGAGAGAGTACCAACGCCTATTAATTTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACATTGCGGATTATCCTCTaGCTGCCTCGGGTATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTSPYKHLSGARAQQLRTLRIIL*LPRVYS Trigger: TGAGTATACCCGAGGCAGCCAGAGGATAATCCGCAA...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | ACAACAAAATTAATAGGCGTTGGTACTCTCTCTAGCTTGTGTCCATCTGTGTGTCTGCTTTTCTTCTCATaGGTGGAGCTGGTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTKLIGVGTLSSLCPSVCLLFFS*VELVTE Trigger: CTCAGTTACCAGCTCCACCCATGAGAAGAAAAGCAG...ACACACAGATGGACACAAGCTAGAGAGAGTACCAACGCCTATTAATTTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CCA 90 bp | TGGCTCATATCCATGATTCCAGCACTTGTGGGAGACAAAGGCAGGAGAATTGAGGGTTCAATCTCCAAGTaGGTGGTGTCTTTATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: WLISMIPALVGDKGRRIEGSISK*VVSLLI Trigger: AATTAATAAAGACACCACCCACTTGGAGATTGAACC...CTCAATTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACGACGTCAAACTGGGCTaGTCTCTGTTTAGGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHIFIVKKTNRVESLSRDDVKLG*SLFRNH Trigger: GTGATTCCTAAACAGAGAGCAGCCCAGTTTGACGTC...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACTCTTTATACTGTGGTTaGTGTGGCACGTTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHIFIVKKTNRVESLSRDSLYCG*CGTLLP Trigger: AGGGAGCAACGTGCCACAGCAACCACAGTATAAAGA...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | ACAACAAAATTAATAGGCGTTGGTACTCTCTCTAGCTTGTGTCCATCTGTGTGTCCATGTGCTTATTTGTaGCAGCTGGCTTTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTKLIGVGTLSSLCPSVCPCAYL*QLAFVS Trigger: AGAAACAAAAGCCAGCTGTCACAAATAAGCACATGG...ACACACAGATGGACACAAGCTAGAGAGAGTACCAACGCCTATTAATTTTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | AGAAGTAGGAGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGCTGTTCTTGGACAGCTaGTCTTGGATAAGAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: RSRRRVLKGRLHRSHSIKLFLDS*SWIRMT Trigger: AGTCATTCTTATCCAAGAGCAGCTGTCCAAGAACAG...CTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCTCCTACTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR TCA 90 bp | CCCAGGATTCTGTTAGCTAGAAGACCTCAGAGGAAATTTAAAGGAAGAAGGTTTACCTTATCAAAGGTCTaGTTGGTGTATCGTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRILLARRPQRKFKGRRFTLSKV*LVYRFK Trigger: CTTGAAACGATACACCAATCAGACCTTTGATAAGGT...AAACCTTCTTCCTTTAAATTTCCTCTGAGGTCTTCTAGCTAACAGAATCCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR GCA 90 bp | TGCCACATCTTTATTGTGAAGAAAACAAACAGGGTTGAGTCTTTAAGTCGTGACAGATTCTTGTCATCATaGCGAGTGCAGATATATATG | + |
|
Preference number: 4 (lower is better) Translates to: CHIFIVKKTNRVESLSRDRFLSS*RVQIYM Trigger: CATATATATCTGCACTCGGCATGATGACAAGAATCT...GTCACGACTTAAAGACTCAACCCTGTTTGTTTTCTTCACAATAAAGATGTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | CCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCCTCGTGCCAATGGGTAAGGCGTaGCGGATTATCCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRAPCLRLYRPSADCTLVPMGKA*RIILWL Trigger: CAGCCAGAGGATAATCCGCAACGCCTTACCCATTGG...CACGAGGGTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACTGGCGACTGCTGAATTaGTCTCCAATCTCTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EVTESPLPQAVQAVGRLHWRLLN*SPISGR Trigger: GCGCCCAGAGATTGGAGACAAATTCAGCAGTCGCCA...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | ATCGCGCGACCGCCCTTCAGTGGGCTGCCTGGTAAGGACAGCTCGTaGTCCTCGGGCCCGGGCGTGCATTTTATCCAGCACCATGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IARPPFSGLPGKDSS*SSGPGVHFIQHHVF Trigger: AAACACATGGTGCTGGATAAAATGCACGCCCGGGCCCGAGGACCACGAGCTGTCCTTACCAGGCAGCCCACTGAAGGGCGGTCGCGCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGGGACACTCATTCAGTTaGGCAAACTCTGCCGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKGHSFS*ANSAGV Trigger: AACGCCGGCAGAGTTTGCCAAACTGAATGAGTGTCC...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGAATGGTACCCATGGCTaGCTTGCCCATAGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKNGTHG*LAHSTL Trigger: CAGTGTGCTATGGGCAAGCAAGCCATGGGTACCATT...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | AGGCCAGAGGGACACTGGGGTCCTCCTCAGTCACTGTTCACACTAGCCCTTGACTCTAACACGCCTGCCTaGCCAGCCAGCAGCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RPEGHWGPPQSLFTLALDSNTPA*PASSSI Trigger: AATTGAGCTGCTGGCTGGCAAGGCAGGCGTGTTAGA...GTCAAGGGCTAGTGTGAACAGTGACTGAGGAGGACCCCAGTGTCCCTCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | TCATGGACTGTAACTCCTGGAAGAGCAGCTTGCAGGCATACGGGATaGGGAGGGAGGACACGTGGCACGAAGATTTGCAGTAGTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SWTVTPGRAACRHTG*GGRTRGTKICSSGT Trigger: GGTGCCACTACTGCAAATCTTCGTGCCACGTGTCCTCCCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTACAGTCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | TTGGCCAGTTTCAGCCTGGGGATGATGTTCATGGACTGTAACTCCTaGAAGAGCAGCTTGCAGGCATACGGGATGCGGAGGGAGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: LASFSLGMMFMDCNS*KSSLQAYGMRREDT Trigger: CGTGTCCTCCCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTACAGTCCATGAACATCATCCCCAGGCTGAAACTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | AAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACCTTTACAAGCACCTGTTaGTTTTCCACTTTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KSPRAPCLRLYRPSADCTFTSTC*FSTFSP Trigger: AGGTGAGAAAGTGGAAAACAAACAGGTGCTTGTAAA...GGTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 90 bp | TGCGGATTATCCTCTGGCTGCCTCGGGTATACTCAATGTCCACTGTaGTTGGGGCGGAGTACGTCATGTCCCTCAGACGGCACTCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: CGLSSGCLGYTQCPL*LGRSTSCPSDGTHE Trigger: CTCATGAGTGCCGTCTGAGGGACATGACGTACTCCGCCCCAATCACAGTGGACATTGAGTATACCCGAGGCAGCCAGAGGATAATCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | CGAGATCTTCACACACATCCTTCACTTTACTCCCTCCAAAGGCAGTaGCGTAGTGGAACCTGCCGTCTAACACGCCTGCCTTGCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RDLHTHPSLYSLQRQ*RSGTCRLTRLPCQP Trigger: TGGCTGGCAAGGCAGGCGTGTTAGACGGCAGGTTCCACTACGGCACTGCCTTTGGAGGGAGTAAAGTGAAGGATGTGTGTGAAGATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | GATTATCCTCTGGCTGCCTCGGGTATACTCAATGTCCACTGTGATTaGGGCGGAGTACGTCATGTCCCTCAGACGGCACTCATGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DYPLAASGILNVHCD*GGVRHVPQTALMRG Trigger: TCCCCTCATGAGTGCCGTCTGAGGGACATGACGTACTCCGCCCCAATCACAGTGGACATTGAGTATACCCGAGGCAGCCAGAGGATAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | ATGATGTCGGGACAGATGCCAGAATCACAGAACGGCATGTCTTCCTaGGGGACGATCAGGCCACAGACACCCTTTTGTCCATGGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: MMSGQMPESQNGMSS*GTIRPQTPFCPWRL Trigger: CAGTCGCCATGGACAAAAGGGTGTCTGTGGCCTGATCGTCCCCCAGGAAGACATGCCGTTCTGTGATTCTGGCATCTGTCCCGACATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | GAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTCGGCCGACTGCACACTGGTCTAGTTACATaGAAGCTTTCTTCAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: EVTESPLPQAVQAVGRLHTGLVT*KLSSTS Trigger: TGATGTTGAAGAAAGCTTCAATGTAACTAGACCAGT...GTGCAGTCGGCCGACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | CAGAATGAGCACAGAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTACTGGTAGGTGTTTCTaGGAGACTGGTTGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QNEHRSHREPPASGCTGRTGRCF*ETGCDE Trigger: CTCATCACAACCAGTCTCCAAGAAACACCTACCAGT...ACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGACTGTGGGCATGGACTaGTTTACAAGCACCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKTVGMD*FTSTCL Trigger: CAAACAGGTGCTTGTAAACAAGTCCATGCCCACAGT...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 90 bp | GGCCATGTTGGTTCTGCTTTTCTTCTCATGGGTGGAGCTGGTAACTaGGGCTCCAACGGCTCCTTTCCTGTCGGCCTCCACAATGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHVGSAFLLMGGAGN*GSNGSFPVGLHNDP Trigger: AGGATCATTGTGGAGGCCGACAGGAAAGGAGCCGTTGGAGCCTCAGTTACCAGCTCCACCCATGAGAAGAAAAGCAGAACCAACATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | CATCCTTCACTTTACTCCCTCCAAAGGCAGTGCCGTAGTGGAACCTaGCGTCTAACACGCCTGCCTTGCCAGCCAGCAGCTCAATTAACT | + |
|
Preference number: 5 (lower is better) Translates to: HPSLYSLQRQCRSGT*RLTRLPCQPAAQLT Trigger: AGTTAATTGAGCTGCTGGCTGGCAAGGCAGGCGTGTTAGACGGCAGGTTCCACTACGGCACTGCCTTTGGAGGGAGTAAAGTGAAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | ATGATGGGCATTCTGCCAATGGGTAAGGCGTTGCGGATTATCCTCTaGCTGCCTCGGGTATACTCAATGTCCACTGTGATTGGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MMGILPMGKALRIIL*LPRVYSMSTVIGAE Trigger: CTCCGCCCCAATCACAGTGGACATTGAGTATACCCGAGGCAGCCAGAGGATAATCCGCAACGCCTTACCCATTGGCAGAATGCCCATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | GGTACCCATGGCTTGCTTGCCCATAGCACACTGGTAGGTGTTTCTTaGAGACTGGTTGTGATGAGGGTATGGGATCAGGCCGGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTHGLLAHSTLVGVS*RLVVMRVWDQAGTN Trigger: GTTTGTGCCGGCCTGATCCCATACCCTCATCACAACCAGTCTCCAAGAAACACCTACCAGTGTGCTATGGGCAAGCAAGCCATGGGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | CTGACTTTTACAGGGGTGCTAGGTGCCACACCCAGCCCTTACATGGGTTGTTGGTCTCTGTCATCGACCTaGTTATCTCCTTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTFTGVLGATPSPYMGCWSLSST*LSPWAR Trigger: CCTGGCCCAAGGAGATAACAAGGTCGATGACAGAGA...CCAACAACCCATGTAAGGGCTGGGTGTGGCACCTAGCACCCCTGTAAAAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | CAGAATGAGCACAGAAGTCACCGAGAGCCCCCTGCCTCAGGCTGTACAGGCCGTAAAATTCCTGTAGCCTaGAGCCAACTCTTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNEHRSHREPPASGCTGRKIPVA*SQLFHV Trigger: CACATGGAAGAGTTGGCTCAAGGCTACAGGAATTTT...ACGGCCTGTACAGCCTGAGGCAGGGGGCTCTCGGTGACTTCTGTGCTCATTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 90 bp | CTGCCGGCGTTTTCCCTGTTAGAACACAGTTCGAGCTTCGGAGCATaGTGGGCATTCTGCCAATGGGTAAGGCGTTGCGGATTATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAFSLLEHSSSFGA*WAFCQWVRRCGLSS Trigger: AGAGGATAATCCGCAACGCCTTACCCATTGGCAGAATGCCCATCATGCTCCGAAGCTCGAACTGTGTTCTAACAGGGAAAACGCCGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | CAAAGGCAGTGCCGTAGTGGAACCTGCCGTCTAACACGCCTGCCTTaGCAGCCAGCAGCTCAATTAACTTTCCAACCGTCATTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRQCRSGTCRLTRLP*QPAAQLTFQPSFLM Trigger: CATCAAGAATGACGGTTGGAAAGTTAATTGAGCTGCTGGCTGGCAAGGCAGGCGTGTTAGACGGCAGGTTCCACTACGGCACTGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | ACTCAGTGCTGTGCGGGGCCCAGCACCTCCTATGGCTTCAGGCTCCAGATCAAGCTTGGACAGCTGCTCTaGGATAAGAATGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQCCAGPSTSYGFRLQIKLGQLL*DKNDFF Trigger: GAAAAAGTCATTCTTATCCAAGAGCAGCTGTCCAAG...CTTGATCTGGAGCCTGAAGCCATAGGAGGTGCTGGGCCCCGCACAGCACTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | CGCGTCCTCAATGTCATAGCCGCTGTAGCTCATCACGGCAACAGTTaGGTTCTGGCCAGCCGGCAACTTCTCAAAATCTATCAACTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVLNVIAAVAHHGNS*VLASRQLLKIYQLD Trigger: ATCGAGTTGATAGATTTTGAGAAGTTGCCGGCTGGCCAGAACGCAACTGTTGCCGTGATGAGCTACAGCGGCTATGACATTGAGGACGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | GGCGGAGTACGTCATGTCCCTCAGACGGCACTCATGAGGGGACACTaGTCTAGTTACATTGAAGCTTTCTTCAACATCAGGAAGTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGVRHVPQTALMRGH*SSYIEAFFNIRKSD Trigger: GTCGGACTTCCTGATGTTGAAGAAAGCTTCAATGTAACTAGACCAGTGTCCCCTCATGAGTGCCGTCTGAGGGACATGACGTACTCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | GACCAATTTCCCGTGGAGATGGCATTGACCATGCCGTTGGTAATCTaGTCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DQFPVEMALTMPLVI*SWRMCLTTSNWAAL Trigger: GAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGGAAATTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | AGCACACTGGTAGGTGTTTCTTGGAGACTGGTTGTGATGAGGGTATaGGATCAGGCCGGCACAAACACCAAGCAGAGTGAAGGGTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: STLVGVSWRLVVMRV*DQAGTNTKQSEGFN Trigger: ATTGAACCCTTCACTCTGCTTGGTGTTTGTGCCGGCCTGATCCCATACCCTCATCACAACCAGTCTCCAAGAAACACCTACCAGTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | GGAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTTGGCGCATGTGTTTAACTCTCTGTCATCGACCTaGTTATCTCCTTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDGIDHAVGNLVLAHVFNSLSST*LSPWAR Trigger: CCTGGCCCAAGGAGATAACAAGGTCGATGACAGAGA...GTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
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| CDS-3UTR CAA 90 bp | CACCTCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGGCATTGACCATGCCGTaGGTAATCTGGTCTTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSKSCAHTSTHSLDVCVALTMP*VIWSWR Trigger: GCGCCAAGACCAGATTACCAACGGCATGGTCAATGC...CACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | TGGCTCATATCCATGATTCCAGCACTTGTGGGAGACAAAGGCAGGAGAATTGAGGGTTGCTGTGGCACGTaGCTCCCTTCCAAAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: WLISMIPALVGDKGRRIEGCCGT*LPSKGI Trigger: GATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACC...CTCAATTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 90 bp | ACTGTGATTGGGGCGGAGTACGTCATGTCCCTCAGACGGCACTCATaGGGGGACACTGGTCTAGTTACATTGAAGCTTTCTTCAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVIGAEYVMSLRRHS*GDTGLVTLKLSSTS Trigger: TGATGTTGAAGAAAGCTTCAATGTAACTAGACCAGTGTCCCCTCATGAGTGCCGTCTGAGGGACATGACGTACTCCGCCCCAATCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 90 bp | TTTCCCGTGGAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTTaGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FPVEMALTMPLVIWS*RMCLTTSNWAALCL Trigger: TAAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CCA 90 bp | CGCACCTTTGTACGTGATAGGCACATCTTTATACTGTGGTTGCTGTaGCACGTTGCTCCCTTCCAAAGGAATCTGTGTCACTGTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTFVRDRHIFILWLL*HVAPFQRNLCHCGH Trigger: ATGCCCACAGTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CCA 90 bp | GGAGTCTGTCGCACCTTTGTACGTGATAGGCACATCTTTATACTGTaGTTGCTGTGGCACGTTGCTCCCTTCCAAAGGAATCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GVCRTFVRDRHIFIL*LLWHVAPFQRNLCH Trigger: GTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGTGCGACAGACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS-3UTR CAA 90 bp | TCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGGAGGTTCCAACCGTCATTCTaGATGGGAAGCCGTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAKVVPTHLPILWMCVWRFQPSF*MGSRVG Trigger: ACCCACACGGCTTCCCATCAAGAATGACGGTTGGAA...CCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 90 bp | AAACTGGGAAGAGATTCTTGTCATCATGCCGAGTGCAGATATATATaGCAAGCGAGACAGCACCTGGGTCACACCCTGTCGGTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLGRDSCHHAECRYI*QARQHLGHTLSVHL Trigger: AAGATGGACCGACAGGGTGTGACCCAGGTGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGACAAGAATCTCTTCCCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 90 bp | ACTTTCCAACCGTCATTCTTGATGGGAAGCCGTGTGGGTTCATTATaGTGTCGGGACAGATGCCAGAATCACAGAACGGCATGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TFQPSFLMGSRVGSL*CRDRCQNHRTACLP Trigger: AGGAAGACATGCCGTTCTGTGATTCTGGCATCTGTCCCGACATCATAATGAACCCACACGGCTTCCCATCAAGAATGACGGTTGGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS GCA 90 bp | GACCTTGTTATCTCCTTGGGCCAGGATCACCCTTCGCACCATCACTaGAGTGTAGATACACTTAGCTCGGAAATTGAATTCCTTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLVISLGQDHPSHHH*SVDTLSSEIEFLHW Trigger: CCAGTGAAGGAATTCAATTTCCGAGCTAAGTGTATCTACACTGCAGTGATGGTGCGAAGGGTGATCCTGGCCCAAGGAGATAACAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
||
| CDS GCA 90 bp | TCTGTCGCACCTTTGTACGTGATAGGCACATCTTTATACTGTGGTTaGTGTGGCACGTTGCTCCCTTCCAAAGGAATCTGTGTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVAPLYVIGTSLYCG*CGTLLPSKGICVTV Trigger: CACAGTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGTGCGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CCA 90 bp | GTCATCATGCCGAGTGCAGATATATATGACAAGCGAGACAGCACCTaGGTCACACCCTGTCGGTCCATCTTAAATCTCTTCAGAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: VIMPSADIYDKRDST*VTPCRSILNLFRDQ Trigger: TTGGTCTCTGAAGAGATTTAAGATGGACCGACAGGGTGTGACCCAGGTGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGGATTCTGTTAGCTAGAAGACCTCAGAGGAAATTTAAAGGAAGAAGGTTTTCCTGGAAGAGCAGCTaGCAGGCATACGGGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRILLARRPQRKFKGRRFSWKSS*QAYGMR Trigger: CCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGA...AAACCTTCTTCCTTTAAATTTCCTCTGAGGTCTTCTAGCTAACAGAATCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | TTGGTAATCTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTTCACGGCCATGTaGGTTCTGCTTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVIWSWRMCLTTSNWAALCFTAM*VLLFFS Trigger: TGAGAAGAAAAGCAGAACCAACATGGCCGTGAAACA...GAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215853.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAAAGTTGTGCCCACACATCTACCCATTCTTTGGATGTGTGTGTGGAGGGTTGGTAATCTGGTCTaGGCGCATGTGTTTAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAKVVPTHLPILWMCVWRVGNLV*AHVFND Trigger: GTCGTTAAACACATGCGCCAAGACCAGATTACCAAC...CCTCCACACACACATCCAAAGAATGGGTAGATGTGTGGGCACAACTTTTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTCATATCCATGATTCCAGCACTTGTGGGAGACAAAGGCAGGAGAATTGAGACAATGATCCTGTTCTaGGACAGCTGCTCTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: WLISMIPALVGDKGRRIETMILF*DSCSWI Trigger: TATCCAAGAGCAGCTGTCCAAGAACAGGATCATTGT...CTCAATTCTCCTGCCTTTGTCTCCCACAAGTGCTGGAATCATGGATATGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS GCA 90 bp | TCACTTTCCTCGTCTTTTCAAACTGGGAAGAGATTCTTGTCATCATaGCGAGTGCAGATATATATGACAAGCGAGACAGCACCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSFQTGKRFLSS*RVQIYMTSETAPGS Trigger: TGACCCAGGTGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGACAAGAATCTCTTCCCAGTTTGAAAAGACGAGGAAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCAGGGCACAACAGTTAAGAACAAACTGAGAGAGTGGACAGCTAACTTTCCTCAAAGGCATCACTaGAGATCATTAGTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSQGTTVKNKLREWTANFPQRHH*RSLVSP Trigger: TGGAGAGACTAATGATCTCAAGTGATGCCTTTGAGG...AAAGTTAGCTGTCCACTCTCTCAGTTTGTTCTTAACTGTTGTGCCCTGGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCACTGGGAAGAGATTCTaGTCATCATGCCGAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVTGKRF*SSCRVQ Trigger: CTGCACTCGGCATGATGACAAGAATCTCTTCCCAGT...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 90 bp | CTGGTAGCAGCATCCAACATGGGACCCATCACCTTATCAAAGGTCTaGTTGGTGTATCGTTTCAAGGTGCACTTAGCATTTTTATACACA | + |
|
Preference number: 5 (lower is better) Translates to: LVAASNMGPITLSKV*LVYRFKVHLAFLYT Trigger: TGTGTATAAAAATGCTAAGTGCACCTTGAAACGATACACCAATCAGACCTTTGATAAGGTGATGGGTCCCATGTTGGATGCTGCTACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | AACACTTCTCCATATAAACATTTATCTGGAGCCAGGGCACAACAGTTAAGAACATGTCTCAGGAGCATCTaGATGAGGAAAGCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NTSPYKHLSGARAQQLRTCLRSI*MRKASS Trigger: CGAGGATGCTTTCCTCATCAAGATGCTCCTGAGACA...TGTTCTTAACTGTTGTGCCCTGGCTCCAGATAAATGTTTATATGGAGAAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 90 bp | ATCCGTAAGGTTTGTGGAGATAGAAACAAATTCATTGATATAGCCTaGTCTTCGCATCAGCCGGAATGTGCTGACAAGCTTTTTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IRKVCGDRNKFIDIA*SSHQPECADKLFMV Trigger: GACCATAAAAAGCTTGTCAGCACATTCCGGCTGATGCGAAGAGCAGGCTATATCAATGAATTTGTTTCTATCTCCACAAACCTTACGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGTCTTAAAAGGTAGACTTCACAGATCACATTCCATCAAGATCGATGTCTGTTTCACGGCCATGTaGGTTCTGCTTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRVLKGRLHRSHSIKIDVCFTAM*VLLFFS Trigger: TGAGAAGAAAAGCAGAACCAACATGGCCGTGAAACA...GACATCGATCTTGATGGAATGTGATCTGTGAAGTCTACCTTTTAAGACTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGGATTCTGTTAGCTAGAAGACCTCAGAGGAAATTTAAAGGAAGAAGGTTTCTGTTTAGGAATCACTaGGTCTGCAATCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRILLARRPQRKFKGRRFLFRNH*VCNLLH Trigger: ATGAAGAAGATTGCAGACCAAGTGATTCCTAAACAG...AAACCTTCTTCCTTTAAATTTCCTCTGAGGTCTTCTAGCTAACAGAATCCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CCA 72 bp | CCGCCCTTCAGTGGGCTGCCTGGTAAGGACAGCTCGTaGTCCTCGGGCCCGGGCGTGCATTTTATCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPFSGLPGKDSS*SSGPGVHFIQH Trigger: GTGCTGGATAAAATGCACGCCCGGGCCCGAGGACCACGAGCTGTCCTTACCAGGCAGCCCACTGAAGGGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS GCA 72 bp | CATTTTTCCTCCACAGTCGGGATCGGCGCAGTCAGCTaGTCCGGAGTCAGGCTCCCGAACTCCTCGGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: HFSSTVGIGAVS*SGVRLPNSSAR Trigger: TCTAGCCGAGGAGTTCGGGAGCCTGACTCCGGAGCAGCTGACTGCGCCGATCCCGACTGTGGAGGAAAAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | CTTTACTCCCTCCAAAGGCAGTGCCGTAGTGGAACCTaGCGTCTAACACGCCTGCCTTGCCAGCCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LYSLQRQCRSGT*RLTRLPCQPAA Trigger: AGCTGCTGGCTGGCAAGGCAGGCGTGTTAGACGGCAGGTTCCACTACGGCACTGCCTTTGGAGGGAGTAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 72 bp | TCCTCTGGCTGCCTCGGGTATACTCAATGTCCACTGTaGTTGGGGCGGAGTACGTCATGTCCCTCAGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCLGYTQCPL*LGRSTSCPSDG Trigger: GCCGTCTGAGGGACATGACGTACTCCGCCCCAATCACAGTGGACATTGAGTATACCCGAGGCAGCCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | ACGGGATGCGGAGGGAGGACACGTGGCACGAAGATTTaGAGTAGTGGCACCAGCCAGAATATCCCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TGCGGRTRGTKI*SSGTSQNIPGV Trigger: GACTCCTGGGATATTCTGGCTGGTGCCACTACTGCAAATCTTCGTGCCACGTGTCCTCCCTCCGCATCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CTGGCTGCCTCGGGTATACTCAATGTCCACTGTGATTaGGGCGGAGTACGTCATGTCCCTCAGACGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LAASGILNVHCD*GGVRHVPQTAL Trigger: GAGTGCCGTCTGAGGGACATGACGTACTCCGCCCCAATCACAGTGGACATTGAGTATACCCGAGGCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | AGCCTGGGGATGATGTTCATGGACTGTAACTCCTGGAAGAGCAGCTaGCAGGCATACGGGATGCGGAGGGAGGACACGTGGCACGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLGMMFMDCNSWKSS*QAYGMRREDTWHED Trigger: ATCTTCGTGCCACGTGTCCTCCCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTACAGTCCATGAACATCATCCCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 72 bp | GGTTCTGCTTTTCTTCTCATGGGTGGAGCTGGTAACTaGGGCTCCAACGGCTCCTTTCCTGTCGGCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSAFLLMGGAGN*GSNGSFPVGLH Trigger: GTGGAGGCCGACAGGAAAGGAGCCGTTGGAGCCTCAGTTACCAGCTCCACCCATGAGAAGAAAAGCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | GTAACTCCTGGAAGAGCAGCTTGCAGGCATACGGGATaGGGAGGGAGGACACGTGGCACGAAGATTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VTPGRAACRHTG*GGRTRGTKICS Trigger: ACTGCAAATCTTCGTGCCACGTGTCCTCCCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | GGACAGATGCCAGAATCACAGAACGGCATGTCTTCCTaGGGGACGATCAGGCCACAGACACCCTTTTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQMPESQNGMSS*GTIRPQTPFCP Trigger: TGGACAAAAGGGTGTCTGTGGCCTGATCGTCCCCCAGGAAGACATGCCGTTCTGTGATTCTGGCATCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | TTCAGCCTGGGGATGATGTTCATGGACTGTAACTCCTaGAAGAGCAGCTTGCAGGCATACGGGATGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSLGMMFMDCNS*KSSLQAYGMRR Trigger: CCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTACAGTCCATGAACATCATCCCCAGGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | ATGATGTTCATGGACTGTAACTCCTGGAAGAGCAGCTaGCAGGCATACGGGATGCGGAGGGAGGACACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MMFMDCNSWKSS*QAYGMRREDTW Trigger: CCACGTGTCCTCCCTCCGCATCCCGTATGCCTGCAAGCTGCTCTTCCAGGAGTTACAGTCCATGAACATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 72 bp | GGGGCGGAGTACGTCATGTCCCTCAGACGGCACTCATaGGGGGACACTGGTCTAGTTACATTGAAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAEYVMSLRRHS*GDTGLVTLKLS Trigger: AGAAAGCTTCAATGTAACTAGACCAGTGTCCCCTCATGAGTGCCGTCTGAGGGACATGACGTACTCCGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | TTCGAGCTTCGGAGCATGATGGGCATTCTGCCAATGGGTAAGGCGTaGCGGATTATCCTCTGGCTGCCTCGGGTATACTCAATGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FELRSMMGILPMGKA*RIILWLPRVYSMST Trigger: AGTGGACATTGAGTATACCCGAGGCAGCCAGAGGATAATCCGCAACGCCTTACCCATTGGCAGAATGCCCATCATGCTCCGAAGCTCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | GCGCGTCCTCAATGTCATAGCCGCTGTAGCTCATCACGGCAACAGTaGCGTTCTGGCCAGCCGGCAACTTCTCAAAATCTATCAACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARPQCHSRCSSSRQQ*RSGQPATSQNLSTR Trigger: TCGAGTTGATAGATTTTGAGAAGTTGCCGGCTGGCCAGAACGCAACTGTTGCCGTGATGAGCTACAGCGGCTATGACATTGAGGACGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CCCGTGGAGATGGCATTGACCATGCCGTTGGTAATCTaGTCTTGGCGCATGTGTTTAACGACGTCAAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVEMALTMPLVI*SWRMCLTTSNW Trigger: CCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | CCAGGAGTCCACACTGCCCGCAGACGTCAACCTCAAAGGCATCACTaGAGATCATTAGTCTCTCCAGCAAAAGCATACTCGCTCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGVHTARRRQPQRHH*RSLVSPAKAYSLHS Trigger: GCTATGGAGCGAGTATGCTTTTGCTGGAGAGACTAATGATCTCAAGTGATGCCTTTGAGGTTGACGTCTGCGGGCAGTGTGGACTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 72 bp | TTTTCCCTGTTAGAACACAGTTCGAGCTTCGGAGCATaGTGGGCATTCTGCCAATGGGTAAGGCGTTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSLLEHSSSFGA*WAFCQWVRRCG Trigger: TCCGCAACGCCTTACCCATTGGCAGAATGCCCATCATGCTCCGAAGCTCGAACTGTGTTCTAACAGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 72 bp | GGTATGGGATCAGGCCGGCACAAACACCAAGCAGAGTaGAGGGTTCAATCTCCAAGTGGGTGGTGTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GMGSGRHKHQAE*RVQSPSGWCLY Trigger: ATAAAGACACCACCCACTTGGAGATTGAACCCTTCACTCTGCTTGGTGTTTGTGCCGGCCTGATCCCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 72 bp | CCGTCATTCTTGATGGGAAGCCGTGTGGGTTCATTATaGTGTCGGGACAGATGCCAGAATCACAGAACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSFLMGSRVGSL*CRDRCQNHRTA Trigger: TGCCGTTCTGTGATTCTGGCATCTGTCCCGACATCATAATGAACCCACACGGCTTCCCATCAAGAATGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CCA 72 bp | AGTAGCCACCTGGGTCTAGTGGACACTCATTCAGTTTaGCAAACTCTGCCGGCGTTTTCCCTGTTAGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSHLGLVDTHSV*QTLPAFSLLEH Trigger: GTGTTCTAACAGGGAAAACGCCGGCAGAGTTTGCCAAACTGAATGAGTGTCCACTAGACCCAGGTGGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CAA 72 bp | GCCATAATAGTCTCTGTCATCGACCTTGTTATCTCCTaGGGCCAGGATCACCCTTCGCACCATCACTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AIIVSVIDLVIS*GQDHPSHHHCS Trigger: ACTGCAGTGATGGTGCGAAGGGTGATCCTGGCCCAAGGAGATAACAAGGTCGATGACAGAGACTATTATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
||
| CDS CAA 72 bp | GACCAATTTCCCGTGGAGATGGCATTGACCATGCCGTaGGTAATCTGGTCTTGGCGCATGTGTTTAACGACG | + |
|
Preference number: 6 (lower is better) Translates to: DQFPVEMALTMP*VIWSWRMCLTT Trigger: CGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGGAAATTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CAA 72 bp | CAATGTCATAGCCGCTGTAGCTCATCACGGCAACAGTaGCGTTCTGGCCAGCCGGCAACTTCTCAAAATCTA | + |
|
Preference number: 6 (lower is better) Translates to: QCHSRCSSSRQQ*RSGQPATSQNL Trigger: TAGATTTTGAGAAGTTGCCGGCTGGCCAGAACGCAACTGTTGCCGTGATGAGCTACAGCGGCTATGACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CAA 90 bp | ATTTCCCGTGGAGATGGCATTGACCATGCCGTTGGTAATCTGGTCTaGGCGCATGTGTTTAACGACGTCAAACTGGGCTGCTCTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISRGDGIDHAVGNLV*AHVFNDVKLGCSLF Trigger: AAACAGAGAGCAGCCCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS CAA 90 bp | CTCTTCAGAGACCAATTTCCCGTGGAGATGGCATTGACCATGCCGTaGGTAATCTGGTCTTGGCGCATGTGTTTAACGACGTCAAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFRDQFPVEMALTMP*VIWSWRMCLTTSNW Trigger: CCAGTTTGACGTCGTTAAACACATGCGCCAAGACCAGATTACCAACGGCATGGTCAATGCCATCTCCACGGGAAATTGGTCTCTGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS TCA 72 bp | CCTATATACTTCAATGCCTGCATCTGGGTGAAGATCTaGGCTTTCTGGCACTCCTCCAAGCTGGGCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PIYFNACIWVKI*AFWHSSKLGPN Trigger: ATTTGGGCCCAGCTTGGAGGAGTGCCAGAAAGCTCAGATCTTCACCCAGATGCAGGCATTGAAGTATATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
||
| CDS TCA 72 bp | AGAGATTCTTGTCATCATGCCGAGTGCAGATATATATaGCAAGCGAGACAGCACCTGGGTCACACCCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RDSCHHAECRYI*QARQHLGHTLS Trigger: CGACAGGGTGTGACCCAGGTGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGACAAGAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
||
| CDS GCA 72 bp | AATGTCATAGCCGCTGTAGCTCATCACGGCAACAGTTaGGTTCTGGCCAGCCGGCAACTTCTCAAAATCTAT | + |
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Preference number: 6 (lower is better) Translates to: NVIAAVAHHGNS*VLASRQLLKIY Trigger: ATAGATTTTGAGAAGTTGCCGGCTGGCCAGAACGCAACTGTTGCCGTGATGAGCTACAGCGGCTATGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CGTCATGTCCCTCAGACGGCACTCATGAGGGGACACTaGTCTAGTTACATTGAAGCTTTCTTCAACATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RHVPQTALMRGH*SSYIEAFFNIR Trigger: CCTGATGTTGAAGAAAGCTTCAATGTAACTAGACCAGTGTCCCCTCATGAGTGCCGTCTGAGGGACATGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | ATTCTGCCAATGGGTAAGGCGTTGCGGATTATCCTCTaGCTGCCTCGGGTATACTCAATGTCCACTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: ILPMGKALRIIL*LPRVYSMSTVI Trigger: AATCACAGTGGACATTGAGTATACCCGAGGCAGCCAGAGGATAATCCGCAACGCCTTACCCATTGGCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CCGAGTGCAGATATATATGACAAGCGAGACAGCACCTaGGTCACACCCTGTCGGTCCATCTTAAATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSADIYDKRDST*VTPCRSILNLF Trigger: GAAGAGATTTAAGATGGACCGACAGGGTGTGACCCAGGTGCTGTCTCGCTTGTCATATATATCTGCACTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | TCTGTTCCGTTGATTGTAGCCAATGGTACCCATGGCTaGCTTGCCCATAGCACACTGGTAGGTGTTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SVPLIVANGTHG*LAHSTLVGVSW Trigger: CCAAGAAACACCTACCAGTGTGCTATGGGCAAGCAAGCCATGGGTACCATTGGCTACAATCAACGGAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | ATAGGCACATCTTTATACTGTGGTTGCTGTGGCACGTaGCTCCCTTCCAAAGGAATCTGTGTCACTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: IGTSLYCGCCGT*LPSKGICVTVG Trigger: GCCCACAGTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | CACACTGCCCGCAGACGTCAACCTCAAAGGCATCACTaGAGATCATTAGTCTCTCCAGCAAAAGCATACTCG | + |
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Preference number: 6 (lower is better) Translates to: HTARRRQPQRHH*RSLVSPAKAYS Trigger: CGAGTATGCTTTTGCTGGAGAGACTAATGATCTCAAGTGATGCCTTTGAGGTTGACGTCTGCGGGCAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | TTGTACGTGATAGGCACATCTTTATACTGTGGTTGCTGTGGCACGTaGCTCCCTTCCAAAGGAATCTGTGTCACTGTGGGCATGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: LYVIGTSLYCGCCGT*LPSKGICVTVGMDL Trigger: CAAGTCCATGCCCACAGTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | GTCTGTCGCACCTTTGTACGTGATAGGCACATCTTTATACTGTGGTaGCTGTGGCACGTTGCTCCCTTCCAAAGGAATCTGTGTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VCRTFVRDRHIFILW*LWHVAPFQRNLCHC Trigger: ACAGTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGTGCGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | ATCTCCTTGGGCCAGGATCACCCTTCGCACCATCACTaGAGTGTAGATACACTTAGCTCGGAAATTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: ISLGQDHPSHHH*SVDTLSSEIEF Trigger: GAATTCAATTTCCGAGCTAAGTGTATCTACACTGCAGTGATGGTGCGAAGGGTGATCCTGGCCCAAGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
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| CDS CCA 72 bp | GTACGTGATAGGCACATCTTTATACTGTGGTTGCTGTaGCACGTTGCTCCCTTCCAAAGGAATCTGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: VRDRHIFILWLL*HVAPFQRNLCH Trigger: GTGACACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CGCACCTTTGTACGTGATAGGCACATCTTTATACTGTaGTTGCTGTGGCACGTTGCTCCCTTCCAAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RTFVRDRHIFIL*LLWHVAPFQRN Trigger: ATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | GCTCCTTTCCTGTCGGCCTCCACAATGATCCTGTTCTaGGACAGCTGCTCTTGGATAAGAATGACTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: APFLSASTMILF*DSCSWIRMTFS Trigger: GGAAAAAGTCATTCTTATCCAAGAGCAGCTGTCCAAGAACAGGATCATTGTGGAGGCCGACAGGAAAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | TCGTTTGTTGCCATAATAGTCTCTGTCATCGACCTTGTTATCTCCTaGGGCCAGGATCACCCTTCGCACCATCACTGCAGTGTAGATACA | + |
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Preference number: 6 (lower is better) Translates to: SFVAIIVSVIDLVIS*GQDHPSHHHCSVDT Trigger: TGTATCTACACTGCAGTGATGGTGCGAAGGGTGATCCTGGCCCAAGGAGATAACAAGGTCGATGACAGAGACTATTATGGCAACAAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
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| CDS CAA 90 bp | GCCTTGAGCCAACTCTTCCATGTGCTTATTTGTGACAGCTGGCTTTaGTTTCTTAACAATTATGTAAGGCCTGCACAAGCGCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: ALSQLFHVLICDSWL*FLNNYVRPAQAPAI Trigger: GATGGCGGGCGCTTGTGCAGGCCTTACATAATTGTTAAGAAACAAAAGCCAGCTGTCACAAATAAGCACATGGAAGAGTTGGCTCAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | GAGGGCCACTCACTTTCCTCGTCTTTTCAAACTGGGAAGAGATTCTaGTCATCATGCCGAGTGCAGATATATATGACAAGCGAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: EGHSLSSSFQTGKRF*SSCRVQIYMTSETA Trigger: TGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGACAAGAATCTCTTCCCAGTTTGAAAAGACGAGGAAAGTGAGTGGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | ACGTTGCTCCCTTCCAAAGGAATCTGTGTCACTGTGGGCATGGACTaGTTTACAAGCACCTGTTTGTTTTCCACTTTCTCACCTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TLLPSKGICVTVGMD*FTSTCLFSTFSPGE Trigger: TTCTCCAGGTGAGAAAGTGGAAAACAAACAGGTGCTTGTAAACAAGTCCATGCCCACAGTGACACAGATTCCTTTGGAAGGGAGCAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | CCTTTGTACGTGATAGGCACATCTTTATACTGTGGTTaGTGTGGCACGTTGCTCCCTTCCAAAGGAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLYVIGTSLYCG*CGTLLPSKGIC Trigger: ACAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CCA 72 bp | CTTCGCATCAGCCGGAATGTGCTGACAAGCTTTTTATaGTCTCGAATGACACCAAGGATGTTACCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRISRNVLTSFL*SRMTPRMLPFR Trigger: CCTGAATGGTAACATCCTTGGTGTCATTCGAGACCATAAAAAGCTTGTCAGCACATTCCGGCTGATGCGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | ACCTTTGTACGTGATAGGCACATCTTTATACTGTGGTaGCTGTGGCACGTTGCTCCCTTCCAAAGGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: TFVRDRHIFILW*LWHVAPFQRNL Trigger: CAGATTCCTTTGGAAGGGAGCAACGTGCCACAGCAACCACAGTATAAAGATGTGCCTATCACGTACAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | TTTCCTGTCGGCCTCCACAATGATCCTGTTCTTGGACAGCTGCTCTaGGATAAGAATGACTTTTTCCACTCCTTTAACAATGAAGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: FPVGLHNDPVLGQLL*DKNDFFHSFNNEVA Trigger: GGCTACTTCATTGTTAAAGGAGTGGAAAAAGTCATTCTTATCCAAGAGCAGCTGTCCAAGAACAGGATCATTGTGGAGGCCGACAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS TCA 72 bp | GCATCCAACATGGGACCCATCACCTTATCAAAGGTCTaGTTGGTGTATCGTTTCAAGGTGCACTTAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: ASNMGPITLSKV*LVYRFKVHLAF Trigger: AAATGCTAAGTGCACCTTGAAACGATACACCAATCAGACCTTTGATAAGGTGATGGGTCCCATGTTGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | CCTTCCAAAGGAATCTGTGTCACTGTGGGCATGGACTaGTTTACAAGCACCTGTTTGTTTTCCACTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSKGICVTVGMD*FTSTCLFSTFS Trigger: TGAGAAAGTGGAAAACAAACAGGTGCTTGTAAACAAGTCCATGCCCACAGTGACACAGATTCCTTTGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 90 bp | TGGGTCAGAATGGTAGAAGCCAGGAGTTCTCTTGCTTCTTCTATTTaGGTTTTCTTTGGTCCACCTCCCCACATTCTTTGTCTTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: WVRMVEARSSLASSI*VFFGPPPHILCLLT Trigger: AGTAAGAAGACAAAGAATGTGGGGAGGTGGACCAAAGAAAACCAAAATAGAAGAAGCAAGAGAACTCCTGGCTTCTACCATTCTGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077175.7 ENSMUST00000215853.2 |
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| CDS GCA 72 bp | TCGTCTTTTCAAACTGGGAAGAGATTCTTGTCATCATaGCGAGTGCAGATATATATGACAAGCGAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSFQTGKRFLSS*RVQIYMTSETA Trigger: TGCTGTCTCGCTTGTCATATATATCTGCACTCGGCATGATGACAAGAATCTCTTCCCAGTTTGAAAAGACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS GCA 72 bp | GTTTGTGGAGATAGAAACAAATTCATTGATATAGCCTaGTCTTCGCATCAGCCGGAATGTGCTGACAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VCGDRNKFIDIA*SSHQPECADKL Trigger: AAGCTTGTCAGCACATTCCGGCTGATGCGAAGAGCAGGCTATATCAATGAATTTGTTTCTATCTCCACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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| CDS CAA 72 bp | CAAGGATGTTACCATTCAGGAAGACAAGAAACACATTaGGGTAAGAGAGCTCTTCTCCACATAATAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: QGCYHSGRQETH*GKRALLHIINS Trigger: TGAATTTATTATGTGGAGAAGAGCTCTCTTACCCAAATGTGTTTCTTGTCTTCCTGAATGGTAACATCCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077175.7 |
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