RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR3A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025280

Ensembl transcript IDs: ENSMUST00000026322.9, ENSMUST00000223718.2

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTGTTGCTCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATaGTCCCGGATCACAGACAGCTCCTTCAGGATCAGAGCCTCAAGC +
Preference number: 1 (lower is better)
Translates to: GLLLLSSSRRQALPA*SRITDSSFRIRASS
Trigger: GCTTGAGGCTCTGATCCTGAAGGAGCTGTCTGTGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAGCAACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp CTCCTTCAGGATCAGAGCCTCAAGCGTCTCCTCGGCCGTGCAGCCTaGCTGCTGCTGCAGCTTGCCTGTGTTCAGGGCTTCAATGTACTC +
Preference number: 1 (lower is better)
Translates to: LLQDQSLKRLLGRAA*LLLQLACVQGFNVL
Trigger: GAGTACATTGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGAGGCTCTGATCCTGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp TTCAGGATCAGAGCCTCAAGCGTCTCCTCGGCCGTGCAGCCTGGCTaGTGCTGCAGCTTGCCTGTGTTCAGGGCTTCAATGTACTCGTCA +
Preference number: 1 (lower is better)
Translates to: FRIRASSVSSAVQPG*CCSLPVFRASMYSS
Trigger: TGACGAGTACATTGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGAGGCTCTGATCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp ATCAGAGCCTCAAGCGTCTCCTCGGCCGTGCAGCCTGGCTGCTGCTaGAGCTTGCCTGTGTTCAGGGCTTCAATGTACTCGTCACATTTT +
Preference number: 1 (lower is better)
Translates to: IRASSVSSAVQPGCC*SLPVFRASMYSSHF
Trigger: AAAATGTGACGAGTACATTGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGAGGCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp ATTAGACGTGGTCCGGGTGCCTTTCACACCGTGGGTGGCCATGACTaGCCGCAGGTTGTCACCTTCCACCAGAAGCTTGAACTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: IRRGPGAFHTVGGHD*PQVVTFHQKLELLL
Trigger: AAGGAGAAGTTCAAGCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCACCCGGACCACGTCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp ACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTaGATCTCGTTGATGATAGTTGTCCGGGCAGCCTCAATGCCCAGG +
Preference number: 1 (lower is better)
Translates to: TCLLSMLMPWLTIVY*ISLMIVVRAASMPR
Trigger: CCTGGGCATTGAGGCTGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp AAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACATaGAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGA +
Preference number: 1 (lower is better)
Translates to: KPGLGPSLCGPAWLT*RYGHTLQSSAATVR
Trigger: TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTaGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: SIEKPGLGPSLCGPA*LTCRYGHTLQSSAA
Trigger: TGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CCA 90 bp TCAGCAACTGTGCCGGGTATTGGCCGAGGGTCCAAAGGGGATGGATaGTACCTCATAGGTGTTATTAGACGTGGTCCGGGTGCCTTTCAC +
Preference number: 1 (lower is better)
Translates to: SATVPGIGRGSKGDG*YLIGVIRRGPGAFH
Trigger: GTGAAAGGCACCCGGACCACGTCTAATAACACCTATGAGGTACCATCCATCCCCTTTGGACCCTCGGCCAATACCCGGCACAGTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp AACTGGATGATGTCACCGGTGGAGCTCCGCACTGTCAGATCGTACTaGGAGCAGAGGTCTTCCAGGGATTTGACCAGTCTTCTCTGCATG +
Preference number: 1 (lower is better)
Translates to: NWMMSPVELRTVRSY*EQRSSRDLTSLLCM
Trigger: CATGCAGAGAAGACTGGTCAAATCCCTGGAAGACCTCTGCTCGCAGTACGATCTGACAGTGCGGAGCTCCACCGGTGACATCATCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp AGGTCAGAGAGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTaGTTGACCATCGTGTACTGGATCTCGTTGATGATAGTTGTCCGG +
Preference number: 1 (lower is better)
Translates to: RSESSITCLLSMLMP*LTIVYWISLMIVVR
Trigger: CCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCTCTCTGACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp AGGTTGTCACCTTCCACCAGAAGCTTGAACTTCTCCTTCCCACTCTaGTCGTCAATATGGATGACAGCTCGCGACACCTCTGGGATGCCT +
Preference number: 1 (lower is better)
Translates to: RLSPSTRSLNFSFPL*SSIWMTARDTSGMP
Trigger: AGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTTCTGGTGGAAGGTGACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp TCCACCAGAAGCTTGAACTTCTCCTTCCCACTCTGCTCGTCAATATaGATGACAGCTCGCGACACCTCTGGGATGCCTTGTACAACCACC +
Preference number: 1 (lower is better)
Translates to: STRSLNFSFPLCSSI*MTARDTSGMPCTTT
Trigger: GGTGGTTGTACAAGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTTCTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 90 bp GCCACAAAGCCTTTGGCAGCAGGGAGCTTTGAATGCTTCTCAAAGTaGGGCAAAGATCTGTTCTCAAAGCCATCTGGAACCCGGGAGCCA +
Preference number: 1 (lower is better)
Translates to: ATKPLAAGSFECFSK*GKDLFSKPSGTREP
Trigger: TGGCTCCCGGGTTCCAGATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp CTTCCCACTCTGCTCGTCAATATGGATGACAGCTCGCGACACCTCTaGGATGCCTTGTACAACCACCTTGGGCAGATCCTCTTTGAGAAA +
Preference number: 1 (lower is better)
Translates to: LPTLLVNMDDSSRHL*DALYNHLGQILFEK
Trigger: TTTCTCAAAGAGGATCTGCCCAAGGTGGTTGTACAAGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp AGGCCAGCATCAACACACTCTCCTTCATCTTGGCCAGGCCAAACCTaGTTATACCCAGGACTTCACCCTTGTAGGTCATCAGGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: RPASTHSPSSWPGQT*LYPGLHPCRSSGQR
Trigger: TCTCTGACCTGATGACCTACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGTTGATGCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp CTTCAATATACTCTGAGATCTCCCCCAGGAGGGTTTTCTCAATCCTaGCCTTCACCAGGCGTGCATAATCCGCGTCGTCATCCTTGTCTA +
Preference number: 1 (lower is better)
Translates to: LQYTLRSPPGGFSQS*PSPGVHNPRRHPCL
Trigger: TAGACAAGGATGACGACGCGGATTATGCACGCCTGGTGAAGGGCAGGATTGAGAAAACCCTCCTGGGGGAGATCTCAGAGTATATTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp CTGTCTTTTCAAAGGAGGCCAGCATCAACACACTCTCCTTCATCTTaGCCAGGCCAAACCTGGTTATACCCAGGACTTCACCCTTGTAGG +
Preference number: 1 (lower is better)
Translates to: LSFQRRPASTHSPSS*PGQTWLYPGLHPCR
Trigger: CCTACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGTTGATGCTGGCCTCCTTTGAAAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 90 bp GAGGCAAAGATCTGTTCTCAAAGCCATCTGGAACCCGGGAGCCACTaGTGGCTTGCTGTCCCACACAGGCAATCATCTGTGATATGTTTA +
Preference number: 1 (lower is better)
Translates to: EAKICSQSHLEPGSH*WLAVPHRQSSVICL
Trigger: TAAACATATCACAGATGATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTCCCGGGTTCCAGATGGCTTTGAGAACAGATCTTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp TCGTACTGCGAGCAGAGGTCTTCCAGGGATTTGACCAGTCTTCTCTaGATGTATCCTGTTTCAGCAGTCTTTACAGCTGTGTCCACCAGA +
Preference number: 1 (lower is better)
Translates to: SYCEQRSSRDLTSLL*MYPVSAVFTAVSTR
Trigger: TCTGGTGGACACAGCTGTAAAGACTGCTGAAACAGGATACATGCAGAGAAGACTGGTCAAATCCCTGGAAGACCTCTGCTCGCAGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 90 bp TCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTaGGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGACAT +
Preference number: 1 (lower is better)
Translates to: SLSEENPSSHPRSSC*GHGLCLTMVNLCRH
Trigger: ATGTCTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR TCA 90 bp ACACCTCTGGGATGCCTTGTACAACCACCTTGGGCAGATCCTCTTTaGGAAACTGCAGCACATAATACATGGAGCTCTTGCTGTTTTCCC +
Preference number: 1 (lower is better)
Translates to: TPLGCLVQPPWADPL*ETAAHNTWSSCCFP
Trigger: GGGAAAACAGCAAGAGCTCCATGTATTATGTGCTGCAGTTTCTCAAAGAGGATCTGCCCAAGGTGGTTGTACAAGGCATCCCAGAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp GATCTGTTCTCAAAGCCATCTGGAACCCGGGAGCCACTGATGGCTTaGTGTCCCACACAGGCAATCATCTGTGATATGTTTATGAAGGAA +
Preference number: 1 (lower is better)
Translates to: DLFSKPSGTREPLMA*CPTQAIICDMFMKE
Trigger: TTCCTTCATAAACATATCACAGATGATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTCCCGGGTTCCAGATGGCTTTGAGAACAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 90 bp GCTCTCATATACTTATCCCTACAGGTCTCCAGAAACTTCTCTATTTaGGTAGGGGTAATACGGTCCAACTGGTACAGCACACGAGGCTCT +
Preference number: 1 (lower is better)
Translates to: ALIYLSLQVSRNFSI*VGVIRSNWYSTRGS
Trigger: AGAGCCTCGTGTGCTGTACCAGTTGGACCGTATTACCCCTACCCAAATAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTATATGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 90 bp CAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTaGCACAAACTATGTAACAAGAGGGATGTGGAATTCATGTGTGTC +
Preference number: 1 (lower is better)
Translates to: QQHIGQGSRSEMVTS*HKLCNKRDVEFMCV
Trigger: GACACACATGAATTCCACATCCCTCTTGTTACATAGTTTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 90 bp AGAGTAAAAGCTATTGGCCACAAAGCCTTTGGCAGCAGGGAGCTTTaGATGCTTCTCAAAGTGAGGCAAAGATCTGTTCTCAAAGCCATC +
Preference number: 1 (lower is better)
Translates to: RVKAIGHKAFGSREL*MLLKVRQRSVLKAI
Trigger: GATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCAATAGCTTTTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 90 bp GGTAATGTATTTACATTGGTACATCAGTGGAAAATCTGGTATAACTaGGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GNVFTLVHQWKIWYN*ALRNQDWVLVSVGQ
Trigger: CTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCTCAGTTATACCAGATTTTCCACTGATGTACCAATGTAAATACATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp CTGTTGCTCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATGGTCCCGGATCCTCGGCCGTGCAGCCTaGCTGCTGCTGCAGCTTGCC +
Preference number: 2 (lower is better)
Translates to: LLLLSSSRRQALPAWSRILGRAA*LLLQLA
Trigger: GGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAG...GATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAGCAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp CTGTTGCTCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATGGTCCCGGATCCCAGCCTGGCTCACATaGAGGTATGGGCACACCTTA +
Preference number: 2 (lower is better)
Translates to: LLLLSSSRRQALPAWSRIPAWLT*RYGHTL
Trigger: TAAGGTGTGCCCATACCTGCATGTGAGCCAGGCTGG...GATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAGCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGGCCGTGCAGCCTGGCTaGTGCTGCAGCTTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: HQASLGAWMCRWSTALSQAVQPG*CCSLPV
Trigger: CACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGC...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp GGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGCATTGGCGTCTCCTCGGCCGTaGAGCCTGGCTGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: GFTRSLDVQMEYRTVSALASPRP*SLAAAA
Trigger: TGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGC...CAATGCTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp AGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTGGGTGCCTTTCACACCGTaGGTGGCCATGACTGCCCGC +
Preference number: 2 (lower is better)
Translates to: SITCLLSMLMPWLTIVYWVPFTP*VAMTAR
Trigger: GCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCAC...CCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGGCAGGGGTCGTGAGCTaGCTGAGCAGCAGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: HQASLGAWMCRWSTALSQAGVVS*LSSSVE
Trigger: CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGC...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp CATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTAGAGTGAGCAGAGGCTaGAGCCCCTGCCGGAGCTAC +
Preference number: 2 (lower is better)
Translates to: HVCQISGVSWVVWGPCWLRVSRG*SPCRSY
Trigger: GTAGCTCCGGCAGGGGCTGCAGCCTCTGCTCACTCT...AAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGACACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGCTGAGCAGCAGTGTTaGGGTCCCTCAGTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTAEQQC*GPSVKR
Trigger: TCTCTTCACTGAGGGACCTCAACACTGCTGCTCAGC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp CATGAACGGCCACATCACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTAGACAGGAGCCAGCCTaGCAAGCCGAGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: HERPHHQASLGAWMCRWSRQEPA*QAETWH
Trigger: ATGCCATGTCTCGGCTTGCCAGGCTGGCTCCTGTCT...ACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTGATGTGGCCGTTCATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp TGGGTGGCCATGACTGCCCGCAGGTTGTCACCTTCCACCAGAAGCTaGAACTTCTCCTTCCCACTCTGCTCGTCAATATGGATGACAGCT +
Preference number: 2 (lower is better)
Translates to: WVAMTARRLSPSTRS*NFSFPLCSSIWMTA
Trigger: AGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCATGGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp TCAGAGAGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTaGACCATCGTGTACTGGATCTCGTTGATGATAGTTGTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: SESSITCLLSMLMPW*TIVYWISLMIVVRA
Trigger: TGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp GAGAGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGCACCTTACAATCCTCTaGAGCAACAGTGAGATGGCA +
Preference number: 2 (lower is better)
Translates to: ESSITCLLSMLMPWLTIVHLTIL*SNSEMA
Trigger: TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG...CACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp TCCGATGTTCATCGGGATTCCCATGATGATGCACTCAGACACTCCGCATACAGAGCTCTGTGCACAGAGTaGACCTACCGCAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SDVHRDSHDDALRHSAYRALCTE*TYRRAW
Trigger: CCAGGCTCTGCGGTAGGTGCACTCTGTGCACAGAGC...TCTGTATGCGGAGTGTCTGAGTGCATCATCATGGGAATCCCGATGAACATCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp ATTCTTCTTCATGATGGCCTCAGCGGTCAAGGTGAGGTCGTTCTTACTGAGAGCCTCTGTGGGCCAGCCTaGCTCACATGCAGGTATGGG +
Preference number: 2 (lower is better)
Translates to: ILLHDGLSGQGEVVLTESLCGPA*LTCRYG
Trigger: CCCATACCTGCATGTGAGCCAGGCTGGCCCACAGAG...GCTCTCAGTAAGAACGACCTCACCTTGACCGCTGAGGCCATCATGAAGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp AGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTGGTGGCCACAAAGCCTTTaGCAGCAGGGAGCTTTGAAT +
Preference number: 2 (lower is better)
Translates to: SITCLLSMLMPWLTIVYWWPQSL*QQGALN
Trigger: ATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCA...CCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp GGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTaGAAGAGCCCAGTTCCGATGTTCATCGGGATTCCCATGATGATG +
Preference number: 2 (lower is better)
Translates to: GLLGGLGSLLALCNS*KSPVPMFIGIPMMM
Trigger: CATCATCATGGGAATCCCGATGAACATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACACACCTTACAATCCTCTaGAGCAACAGTGAGATGGCA +
Preference number: 2 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTHLTIL*SNSEMA
Trigger: TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp AGCGTTGATGATCTCTTTGATCCGAGGCACACCCAGGGTGATGTTCATGGAGGCACTGTCAGATCGTACTaGGAGCAGAGGTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: SVDDLFDPRHTQGDVHGGTVRSY*EQRSSR
Trigger: CCTGGAAGACCTCTGCTCGCAGTACGATCTGACAGT...GCCTCCATGAACATCACCCTGGGTGTGCCTCGGATCAAAGAGATCATCAACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp CATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTCTCTGCTCGTCAATATaGATGACAGCTCGCGACACC +
Preference number: 2 (lower is better)
Translates to: HVCQISGVSWVVWGPCWLLCSSI*MTARDT
Trigger: GGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAG...AAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGACACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR GCA 90 bp CATGAACGGCCACATCACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTGCCTGGCTCCATCTGTaGTCTCATATACTTATCCCT +
Preference number: 2 (lower is better)
Translates to: HERPHHQASLGAWMCRWSAWLHL*SHILIP
Trigger: AGGGATAAGTATATGAGAGCACAGATGGAGCCAGGC...ACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTGATGTGGCCGTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp AACAAGAGGGATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGGCTTTCAGCAGTCCCTaGCCAGGCGTGACATCACCA +
Preference number: 2 (lower is better)
Translates to: NKRDVEFMCVKYQGSPGWAFSSP*PGVTSP
Trigger: TGGTGATGTCACGCCTGGCCAGGGACTGCTGAAAGC...CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp TCAAATATCAGGGGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTaGTGTAACAGCTTGAAGAGCCCAGTTCCGATGTTCATCGGGATT +
Preference number: 2 (lower is better)
Translates to: SNIRGLLGGLGSLLA*CNSLKSPVPMFIGI
Trigger: AATCCCGATGAACATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp GTTGACCATCGTGTACTGGATCTCGTTGATGATAGTTGTCCGGGCAGCCTCAATGCACTGTCTCAGCATTaGCCTCCAGTCTCAGAAGTC +
Preference number: 2 (lower is better)
Translates to: VDHRVLDLVDDSCPGSLNALSQH*PPVSEV
Trigger: GACTTCTGAGACTGGAGGTCAATGCTGAGACAGTGC...ATTGAGGCTGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp ACAAGGCAAATCCTGCTCCATTTCCCACAACAGATTGCTATGCAATaGCTGGGAGAAGAGAGAGCAAATGTCGGGGTCAGCAACTGTGCC +
Preference number: 2 (lower is better)
Translates to: TRQILLHFPQQIAMQ*LGEERANVGVSNCA
Trigger: GGCACAGTTGCTGACCCCGACATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp TCCGATGTTCATCGGGATTCCCATGATGATGCACTCAGACACTCCGCATACAGACTTCCACCAGAAGCTTaGACTTCTCCTTCCCACTCT +
Preference number: 2 (lower is better)
Translates to: SDVHRDSHDDALRHSAYRLPPEA*TSPSHS
Trigger: AGAGTGGGAAGGAGAAGTTCAAGCTTCTGGTGGAAG...TCTGTATGCGGAGTGTCTGAGTGCATCATCATGGGAATCCCGATGAACATCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp AACAAGAGGGATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTGCTCATGCCGTGGTTaGCCATCGTGTACTGGATCT +
Preference number: 2 (lower is better)
Translates to: NKRDVEFMCVKYQGSPGWCSCRG*PSCTGS
Trigger: AGATCCAGTACACGATGGTCAACCACGGCATGAGCA...CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp CTCCTTCATCTTGGCCAGGCCAAACCTGGTTATACCCAGGACTTCACCCTTGTAGCTACTCCTGCAAAGTaGAATGTCTTCAGCGTCATC +
Preference number: 2 (lower is better)
Translates to: LLHLGQAKPGYTQDFTLVATPAK*NVFSVI
Trigger: GATGACGCTGAAGACATTCCACTTTGCAGGAGTAGC...TACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp ATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTTaGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: MWNSCVSNIRGLLGG*GSLLALCNSLKSPV
Trigger: AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp GTGATAATTGGAGTGCTGATGGCCTTGGAAGCGTTGATGATCTCTTTGATCCGATTGAGAAACCAGGACTaGGTCCTAGTCTCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: VIIGVLMALEALMISLIRLRNQD*VLVSVG
Trigger: GCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAA...TCGGATCAAAGAGATCATCAACGCTTCCAAGGCCATCAGCACTCCAATTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp GCTCCATCTGTGCTCTCATATACTTATCCCTACAGGTCTCCAGAAACTTCTCTAAGAAGATGTTGTTCTTaGACCCCGACCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: APSVLSYTYPYRSPETSLRRCCS*TPTPGS
Trigger: GGACCCTGGGGTCGGGGTCCAAGAACAACATCTTCT...TAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTATATGAGAGCACAGATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp TGCACTCAGACACTCCGCATACAGAGTCTTTCTGCCCAAAGTAGGCAGCATCAATTAGTAGCTCATACTTaGCTTTCAGCAGTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: CTQTLRIQSLSAQSRQHQLVAHT*LSAVPG
Trigger: GCCAGGGACTGCTGAAAGCCAAGTATGAGCTACTAA...TTGATGCTGCCTACTTTGGGCAGAAAGACTCTGTATGCGGAGTGTCTGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp AACAAGAGGGATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGGTAATACGGTCCAACTaGTACAGCACACGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: NKRDVEFMCVKYQGSPGWVIRSN*YSTRGS
Trigger: AGAGCCTCGTGTGCTGTACCAGTTGGACCGTATTAC...CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp TGCTCTCATATACTTATCCCTACAGGTCTCCAGAAACTTCTCTATTaGGGTAGGGGTAATACGGTCCAACTGGTACAGCACACGAGGCTC +
Preference number: 2 (lower is better)
Translates to: CSHILIPTGLQKLLY*GRGNTVQLVQHTRL
Trigger: GAGCCTCGTGTGCTGTACCAGTTGGACCGTATTACCCCTACCCAAATAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTATATGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp CTGACATGGATACACTGCCTTGATGTTGTCCAGAACCCGCTTAAACTCCAGCGGGAATGCTTCTCAAAGTaGGGCAAAGATCTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LTWIHCLDVVQNPLKLQRECFSK*GKDLFS
Trigger: TGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTC...CCGCTGGAGTTTAAGCGGGTTCTGGACAACATCAAGGCAGTGTATCCATGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp CTGACATGGATACACTGCCTTGATGTTGTCCAGAACCCGCTTAAACTCCAGCGGAAAATCTGGTATAACTaGGCATTGAGAAACCAGGAC +
Preference number: 2 (lower is better)
Translates to: LTWIHCLDVVQNPLKLQRKIWYN*ALRNQD
Trigger: GTCCTGGTTTCTCAATGCTCAGTTATACCAGATTTT...CCGCTGGAGTTTAAGCGGGTTCTGGACAACATCAAGGCAGTGTATCCATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CCA 90 bp TCCAACTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATCAGAGTAAAAGCTATTaGCCACAAAGCCTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: SNWYSTRGSVVPLSLIPYQSKSY*PQSLWQ
Trigger: CTGCCAAAGGCTTTGTGGCCAATAGCTTTTACTCTG...ATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTaGTCTGACCATGGTAAATTTATGCAGACATCTGTTCAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: ESQFPSKELLLRAWT*SDHGKFMQTSVQVK
Trigger: TTTTACTTGAACAGATGTCTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CAA 90 bp CAGAGTAAAAGCTATTGGCCACAAAGCCTTTGGCAGCAGGGAGCTTaGAATGCTTCTCAAAGTGAGGCAAAGATCTGTTCTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: QSKSYWPQSLWQQGA*NASQSEAKICSQSH
Trigger: ATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCAATAGCTTTTACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR TCA 90 bp AGCACAAGGCAAATCCTGCTCCATTTCCCACAACAGATTGCTATGCAATTGCTGACAGGCAATCATCTGTaGTATGTTTATGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: STRQILLHFPQQIAMQLLTGNHL*YVYEGT
Trigger: GGTTCCTTCATAAACATATCACAGATGATTGCCTGT...CAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp GATCAGAGCCTCAAGCGTCTCCTCGGCCGTGCAGCCTaGCTGCTGCTGCAGCTTGCCTGTGTTCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: DQSLKRLLGRAA*LLLQLACVQGF
Trigger: GAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGAGGCTCTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp ACGTGGTCCGGGTGCCTTTCACACCGTGGGTGGCCATaGCTGCCCGCAGGTTGTCACCTTCCACCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: TWSGCLSHRGWP*LPAGCHLPPEA
Trigger: AGCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCACCCGGACCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp AGAGCCTCAAGCGTCTCCTCGGCCGTGCAGCCTGGCTaGTGCTGCAGCTTGCCTGTGTTCAGGGCTTCAATG +
Preference number: 3 (lower is better)
Translates to: RASSVSSAVQPG*CCSLPVFRASM
Trigger: CATTGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGAGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp GGCTGTTGCTCTTGTCCAGCTCGCGGAGGCAGGCACTaGCAGCATGGTCCCGGATCACAGACAGCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: GCCSCPARGGRH*QHGPGSQTAPS
Trigger: TGAAGGAGCTGTCTGTGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAGCAACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp CTGGGTGCCGGGCTCACCAATGCTCTGTGCACAGAGTaGACCTACCGCAGAGCCTGGCTCCATCTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: LGAGLTNALCTE*TYRRAWLHLCS
Trigger: AGAGCACAGATGGAGCCAGGCTCTGCGGTAGGTGCACTCTGTGCACAGAGCATTGGTGAGCCCGGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp TCAAGCGTCTCCTCGGCCGTGCAGCCTGGCTGCTGCTaGAGCTTGCCTGTGTTCAGGGCTTCAATGTACTCG +
Preference number: 3 (lower is better)
Translates to: SSVSSAVQPGCC*SLPVFRASMYS
Trigger: CGAGTACATTGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp GGTCCGGGTGCCTTTCACACCGTGGGTGGCCATGACTaGCCGCAGGTTGTCACCTTCCACCAGAAGCTTGAA +
Preference number: 3 (lower is better)
Translates to: GPGAFHTVGGHD*PQVVTFHQKLE
Trigger: TTCAAGCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCACCCGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CTCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATaGTCCCGGATCACAGACAGCTCCTTCAGGATCAGA +
Preference number: 3 (lower is better)
Translates to: LLSSSRRQALPA*SRITDSSFRIR
Trigger: TCTGATCCTGAAGGAGCTGTCTGTGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp GTGTTATTAGACGTGGTCCGGGTGCCTTTCACACCGTaGGTGGCCATGACTGCCCGCAGGTTGTCACCTTCC +
Preference number: 3 (lower is better)
Translates to: VLLDVVRVPFTP*VAMTARRLSPS
Trigger: GGAAGGTGACAACCTGCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCACCCGGACCACGTCTAATAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp GATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTaGGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATC +
Preference number: 3 (lower is better)
Translates to: DGRGRELAEQQC*GPSVKRIPVPI
Trigger: GATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR TCA 72 bp GTGAGCTGGCTGAGCAGCAGTGTTGAGGTCCCTCAGTaGAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: VSWLSSSVEVPQ*RESQFPSKELL
Trigger: CAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGCTCAGCCAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR GCA 72 bp GCTCACATGCAGGTATGGGCACACCTTACAATCCTCTaGAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: AHMQVWAHLTIL*SNSEMAGVVSW
Trigger: CCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CCA 72 bp GTGCCGGGTATTGGCCGAGGGTCCAAAGGGGATGGATaGTACCTCATAGGTGTTATTAGACGTGGTCCGGGT +
Preference number: 3 (lower is better)
Translates to: VPGIGRGSKGDG*YLIGVIRRGPG
Trigger: ACCCGGACCACGTCTAATAACACCTATGAGGTACCATCCATCCCCTTTGGACCCTCGGCCAATACCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTATGACTGCCCGCAGGTaGTCACCTTCCACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVMTARR*SPSTRS
Trigger: GCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCAT...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp ATGTCACCGGTGGAGCTCCGCACTGTCAGATCGTACTaGGAGCAGAGGTCTTCCAGGGATTTGACCAGTCTT +
Preference number: 3 (lower is better)
Translates to: MSPVELRTVRSY*EQRSSRDLTSL
Trigger: AAGACTGGTCAAATCCCTGGAAGACCTCTGCTCGCAGTACGATCTGACAGTGCGGAGCTCCACCGGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp ACTCTGAGATCTCCCCCAGGAGGGTTTTCTCAATCCTaGCCTTCACCAGGCGTGCATAATCCGCGTCGTCAT +
Preference number: 3 (lower is better)
Translates to: TLRSPPGGFSQS*PSPGVHNPRRH
Trigger: ATGACGACGCGGATTATGCACGCCTGGTGAAGGGCAGGATTGAGAAAACCCTCCTGGGGGAGATCTCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CCCAGTCTCGTAGCAAGATGTAGAAGATGTTGTTCTTaGACCCCGACCCCAGGGTCCCTTTGTCCATGCTGC +
Preference number: 3 (lower is better)
Translates to: PSLVARCRRCCS*TPTPGSLCPCC
Trigger: GCAGCATGGACAAAGGGACCCTGGGGTCGGGGTCCAAGAACAACATCTTCTACATCTTGCTACGAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CATGAACGGCCACATCACCAGGCTTCACTCGGAGCTTaGATGTGCAGATGGAGTACCGCACTGTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: HERPHHQASLGA*MCRWSTALSQH
Trigger: ATGCTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTGATGTGGCCGTTCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CTGCTCGTCAATATGGATGACAGCTCGCGACACCTCTaGGATGCCTTGTACAACCACCTTGGGCAGATCCTC +
Preference number: 3 (lower is better)
Translates to: LLVNMDDSSRHL*DALYNHLGQIL
Trigger: GAGGATCTGCCCAAGGTGGTTGTACAAGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATTGACGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp CTCCTTCATCTTGGCCAGGCCAAACCTGGTTATACCCAGGACTTCACCCTTGTAGGAGCCACTGATGGCTaGCTGTCCCACACAGGCAAT +
Preference number: 3 (lower is better)
Translates to: LLHLGQAKPGYTQDFTLVGATDG*LSHTGN
Trigger: ATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTCC...TACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp ATCTGTTCTCAAAGCCATCTGGAACCCGGGAGCCACTaGTGGCTTGCTGTCCCACACAGGCAATCATCTGTG +
Preference number: 3 (lower is better)
Translates to: ICSQSHLEPGSH*WLAVPHRQSSV
Trigger: CACAGATGATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTCCCGGGTTCCAGATGGCTTTGAGAACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTaGATCTCGTTGATGATAGTTGTCCGGGCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: LSMLMPWLTIVY*ISLMIVVRAAS
Trigger: TGAGGCTGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp GTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTaGAGAGCCCAGTTCCGATGTTCATCGGGATTCCCA +
Preference number: 3 (lower is better)
Translates to: VVWGPCWLCVTA*RAQFRCSSGFP
Trigger: TGGGAATCCCGATGAACATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp GCATTTAGTAGCTCATACTTGGCTTTCAGCAGTCCCTaGCCAGGCGTGACATCACCAATCCCGATGGAGAAC +
Preference number: 3 (lower is better)
Translates to: AFSSSYLAFSSP*PGVTSPIPMEN
Trigger: GTTCTCCATCGGGATTGGTGATGTCACGCCTGGCCAGGGACTGCTGAAAGCCAAGTATGAGCTACTAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp AGCTTGAACTTCTCCTTCCCACTCTGCTCGTCAATATaGATGACAGCTCGCGACACCTCTGGGATGCCTTGT +
Preference number: 3 (lower is better)
Translates to: SLNFSFPLCSSI*MTARDTSGMPC
Trigger: ACAAGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp AGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTaGTTGACCATCGTGTACTGGATCTCGTTGATGATA +
Preference number: 3 (lower is better)
Translates to: SSITCLLSMLMP*LTIVYWISLMI
Trigger: TATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp CAAAGGAGGCCAGCATCAACACACTCTCCTTCATCTTaGCCAGGCCAAACCTGGTTATACCCAGGACTTCAC +
Preference number: 3 (lower is better)
Translates to: QRRPASTHSPSS*PGQTWLYPGLH
Trigger: GTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGTTGATGCTGGCCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp AGCACAAGGCAAATCCTGCTCCATTTCCCACAACAGATTGCTATGCAATTGCTGGGCTGCTGCTGCAGCTaGCCTGTGTTCAGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: STRQILLHFPQQIAMQLLGCCCS*PVFRAS
Trigger: TGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCC...CAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp AATGCTCTGTGCACAGAGTGCACCTACCGCAGAGCCTaGCTCCATCTGTGCTCTCATATACTTATCCCTACA +
Preference number: 3 (lower is better)
Translates to: NALCTECTYRRA*LHLCSHILIPT
Trigger: TGTAGGGATAAGTATATGAGAGCACAGATGGAGCCAGGCTCTGCGGTAGGTGCACTCTGTGCACAGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp GGCAAATCCTGCTCCATTTCCCACAACAGATTGCTATaGAATTGCTGGGAGAAGAGAGAGCAAATGTCGGGG +
Preference number: 3 (lower is better)
Translates to: GKSCSISHNRLL*NCWEKREQMSG
Trigger: CCCCGACATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATaGACTTTGTCTGACCATGGTAAATTTATGCAGACA +
Preference number: 3 (lower is better)
Translates to: SQFPSKELLLRA*TLSDHGKFMQT
Trigger: TGTCTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CCA 72 bp GAGGTCGTTCTTACTGAGAGCAGGTTCAGTCTGACATaGATACACTGCCTTGATGTTGTCCAGAACCCGCTT +
Preference number: 3 (lower is better)
Translates to: EVVLTESRFSLT*IHCLDVVQNPL
Trigger: AAGCGGGTTCTGGACAACATCAAGGCAGTGTATCCATGTCAGACTGAACCTGCTCTCAGTAAGAACGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp TCAACACACTCTCCTTCATCTTGGCCAGGCCAAACCTaGTTATACCCAGGACTTCACCCTTGTAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: STHSPSSWPGQT*LYPGLHPCRSS
Trigger: TGATGACCTACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGACTGAGGGCATGGACTTaGTCTGACCATGGTAAATTT +
Preference number: 3 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRLRAWT*SDHGKF
Trigger: AAATTTACCATGGTCAGACAAAGTCCATGCCCTCAG...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp TCCAACTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTTATGAAGGAACCTTaGGAGCCACACAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: SNWYSTRGSVVPLSLIPYFMKEP*EPHRAM
Trigger: CATGGCCCTGTGTGGCTCCAAAGGTTCCTTCATAAA...ATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp CTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTGGATCTCGTTGATGATATACACTGCCTTGATGTaGTCCAGAACCCGCTTAAAC +
Preference number: 3 (lower is better)
Translates to: LSMLMPWLTIVYWISLMIYTALM*SRTRLN
Trigger: GTTTAAGCGGGTTCTGGACAACATCAAGGCAGTGTA...TATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp TCAATATACTCTGAGATCTCCCCCAGGAGGGTTTTCTCAATCCTGCCCTTCACCATGGCCTTGGAAGCGTaGATGATCTCTTTGATCCGA +
Preference number: 3 (lower is better)
Translates to: SIYSEISPRRVFSILPFTMALEA*MISLIR
Trigger: TCGGATCAAAGAGATCATCAACGCTTCCAAGGCCAT...GGTGAAGGGCAGGATTGAGAAAACCCTCCTGGGGGAGATCTCAGAGTATATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp GAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTaGGGGCATGGACTTTGTCTGACCATGGTAAATTTA +
Preference number: 3 (lower is better)
Translates to: EENPSSHPRSSC*GHGLCLTMVNL
Trigger: TAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR TCA 72 bp CCTTTGGCAGCAGGGAGCTTTGAATGCTTCTCAAAGTaGGGCAAAGATCTGTTCTCAAAGCCATCTGGAACC +
Preference number: 3 (lower is better)
Translates to: PLAAGSFECFSK*GKDLFSKPSGT
Trigger: GGTTCCAGATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp GCTATTGGCCACAAAGCCTTTGGCAGCAGGGAGCTTTaGATGCTTCTCAAAGTGAGGCAAAGATCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: AIGHKAFGSREL*MLLKVRQRSVL
Trigger: GAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp AAGGTGAGGTCGTTCTTACTGAGAGCAGGTTCAGTCTaGCATGGATACACTGCCTTGATGTTGTCCAGAACC +
Preference number: 3 (lower is better)
Translates to: KVRSFLLRAGSV*HGYTALMLSRT
Trigger: GGTTCTGGACAACATCAAGGCAGTGTATCCATGTCAGACTGAACCTGCTCTCAGTAAGAACGACCTCACCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp GGATGCCTTGTACAACCACCTTGGGCAGATCCTCTTTaGGAAACTGCAGCACATAATACATGGAGCTCTTGC +
Preference number: 3 (lower is better)
Translates to: GCLVQPPWADPL*ETAAHNTWSSC
Trigger: GCAAGAGCTCCATGTATTATGTGCTGCAGTTTCTCAAAGAGGATCTGCCCAAGGTGGTTGTACAAGGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp GAGCAGAGGTCTTCCAGGGATTTGACCAGTCTTCTCTaGATGTATCCTGTTTCAGCAGTCTTTACAGCTGTG +
Preference number: 3 (lower is better)
Translates to: EQRSSRDLTSLL*MYPVSAVFTAV
Trigger: CACAGCTGTAAAGACTGCTGAAACAGGATACATGCAGAGAAGACTGGTCAAATCCCTGGAAGACCTCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp AACTTCTCTATTTGGGTAGGGGTAATACGGTCCAACTaGTACAGCACACGAGGCTCTGTTGTGCCGTTATCA +
Preference number: 3 (lower is better)
Translates to: NFSIWVGVIRSN*YSTRGSVVPLS
Trigger: TGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAGTTGGACCGTATTACCCCTACCCAAATAGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp TGCTCCATTTCCCACAACAGATTGCTATGCAATTGCTaGGAGAAGAGAGAGCAAATGTCGGGGTCAGCAACT +
Preference number: 3 (lower is better)
Translates to: CSISHNRLLCNC*EKREQMSGSAT
Trigger: AGTTGCTGACCCCGACATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp TGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTaGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACA +
Preference number: 3 (lower is better)
Translates to: CGIHVCQISGVS*VVWGPCWLCVT
Trigger: TGTTACACAAAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp AACAAGAGGGATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTTTAGTAGCTCATACTaGGCTTTCAGCAGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: NKRDVEFMCVKYQGSPGWFSSSY*AFSSPW
Trigger: CCAGGGACTGCTGAAAGCCAAGTATGAGCTACTAAA...CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp ACTGATGGCTTGCTGTCCCACACAGGCAATCATCTGTaGTATGTTTATGAAGGAACCTTTGGAGCCACACAG +
Preference number: 3 (lower is better)
Translates to: TDGLLSHTGNHL*YVYEGTFGATQ
Trigger: CTGTGTGGCTCCAAAGGTTCCTTCATAAACATATCACAGATGATTGCCTGTGTGGGACAGCAAGCCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR-3UTR CAA 90 bp TCAATATACTCTGAGATCTCCCCCAGGAGGGTTTTCTCAATCCTGCCCTTCACCGTTGTGCCGTTATCATaGATCCCATATTTATCTCTG +
Preference number: 3 (lower is better)
Translates to: SIYSEISPRRVFSILPFTVVPLS*IPYLSL
Trigger: CAGAGATAAATATGGGATCAATGATAACGGCACAAC...GGTGAAGGGCAGGATTGAGAAAACCCTCCTGGGGGAGATCTCAGAGTATATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp CACAAGGCAAATCCTGCTCCATTTCCCACAACAGATTaGTATGCAATTGCTGGGAGAAGAGAGAGCAAATGT +
Preference number: 3 (lower is better)
Translates to: HKANPAPFPTTD*YAIAGRRESKC
Trigger: ACATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CCA 72 bp TACTTATCCCTACAGGTCTCCAGAAACTTCTCTATTTaGGTAGGGGTAATACGGTCCAACTGGTACAGCACA +
Preference number: 3 (lower is better)
Translates to: YLSLQVSRNFSI*VGVIRSNWYST
Trigger: TGTGCTGTACCAGTTGGACCGTATTACCCCTACCCAAATAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR GCA 72 bp ATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTaGCACAAACTATGTAACAAGAGGGATGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: IGQGSRSEMVTS*HKLCNKRDVEF
Trigger: GAATTCCACATCCCTCTTGTTACATAGTTTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR TCA 72 bp TTTACATTGGTACATCAGTGGAAAATCTGGTATAACTaGGCATTGAGAAACCAGGACTGGGTCCTAGTCTCT +
Preference number: 3 (lower is better)
Translates to: FTLVHQWKIWYN*ALRNQDWVLVS
Trigger: AGAGACTAGGACCCAGTCCTGGTTTCTCAATGCTCAGTTATACCAGATTTTCCACTGATGTACCAATGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CAA 72 bp GAGCCACACAGGGCCATGGTGAGGGGGCTGTTGCTCTaGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: EPHRAMVRGLLL*SSSRRQALPAW
Trigger: CCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGAGCAACAGCCCCCTCACCATGGCCCTGTGTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGCGTCTCCTCGGCCGTaGAGCCTGGCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTASPRP*SLAAAA
Trigger: TGCAGCAGCAGCCAGGCTGCACGGCCGAGGAGACGC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TCTGGGTGCCGGGCTCACCAATGCTCTGTGCACAGAGTGCACCTACCGCAGAGCGGATTCAAGTTCTCCTaGGCCCTTCCCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SGCRAHQCSVHRVHLPQSGFKFS*ALPSRG
Trigger: ACCCCTGCTGGGAAGGGCCCAGGAGAACTTGAATCC...GCTCTGCGGTAGGTGCACTCTGTGCACAGAGCATTGGTGAGCCCGGCACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATCTCGGCCGTGCAGCCTaGCTGCTGCTGCAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHLGRAA*LLLQLA
Trigger: GGCAAGCTGCAGCAGCAGCCAGGCTGCACGGCCGAG...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGACCACAGCCTCCCCATaGACGGCCACATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLTTASP*TATSPG
Trigger: GCCTGGTGATGTGGCCGTTCATGGGGAGGCTGTGGT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTCACCGTGGGTGGCCATaGCTGCCCGCAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGHRGWP*LPAGCH
Trigger: GTGACAACCTGCGGGCAGTCATGGCCACCCACGGTG...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATCGCGGAGGCAGGCACTaGCAGCATGGTCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHRGGRH*QHGPGS
Trigger: TGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCG...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGGTGCCTTTCACACCGTaGGTGGCCATGACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLVPFTP*VAMTAR
Trigger: GCGGGCAGTCATGGCCACCCACGGTGTGAAAGGCAC...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTGAACCCGGGAGCCACTaGTGGCTTGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGEPGSH*WLAVPH
Trigger: GTGTGGGACAGCAAGCCATCAGTGGCTCCCGGGTTC...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGAGTACTGCTTGCCCTTaGTTCGGAGGTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVESTACP*FGGWPA
Trigger: TGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACT...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGGTCTTCAGCGTCATCTaGGTGCCGGGCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVEVFSVI*VPGSPM
Trigger: CATTGGTGAGCCCGGCACCCAGATGACGCTGAAGAC...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGAGGTTGGGGTCAGGTaGGATGACTGTTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHEVGVR*DDCSAG
Trigger: TCCGGCCGAACAGTCATCTCACCTGACCCCAACCTC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CTGGCAAGCCGAGACATGGCATCGGCAGCCTCATTCTGCCCCCAGTCTCGTAGCCCGAACTTGAGCTCCTaGGCCATCTTTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: LASRDMASAASFCPQSRSPNLSS*AIFSRF
Trigger: AAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGG...GCTACGAGACTGGGGGCAGAATGAGGCTGCCGATGCCATGTCTCGGCTTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGTCGGCAGCCTCATTCTaGCCCCAGTCTCGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLSAASF*PQSRSK
Trigger: CTTGCTACGAGACTGGGGGCAGAATGAGGCTGCCGA...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTGTGGGTGGCCATGACTaGCCGCAGGTTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGVGGHD*PQVVTF
Trigger: GAAGGTGACAACCTGCGGGCAGTCATGGCCACCCAC...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAATCTGAAGGTCCGGTaGGGCTTAACCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLNLKVR*GLTLAR
Trigger: CCTGGCCAGGGTTAAGCCCCACCGGACCTTCAGATT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCCCTTGGTTCGGAGGTTaGCCCGCACTGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGPWFGG*PALDCH
Trigger: ATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGG...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GTTGTCCAGAACCCGCTTAAACTCCAGCGGTTCGTCTTTGCCCTCCATGGCAGCAGTACTGCTTGCCCTTaGTTCGGAGGTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VVQNPLKLQRFVFALHGSSTACP*FGGWPA
Trigger: TGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACT...GCTGCCATGGAGGGCAAAGACGAACCGCTGGAGTTTAAGCGGGTTCTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGACAGGAGCCAGCCTaGCAAGCCGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLRQEPA*QAETWH
Trigger: ATGCCATGTCTCGGCTTGCCAGGCTGGCTCCTGTCT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CTGGCAAGCCGAGACATGGCATCGGCAGCCTCATTCTGCCCCCAGTCTCGTAGCCTTCCGGCATTTATCTaGGATCTTCTTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LASRDMASAASFCPQSRSLPAFI*DLLLQA
Trigger: GGCCTGAAGAAGAAGATCTCAGATAAATGCCGGAAG...GCTACGAGACTGGGGGCAGAATGAGGCTGCCGATGCCATGTCTCGGCTTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTGAGGTTGGGGTCAGGTaGGATGACTGTTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVEVGVR*DDCSAG
Trigger: TCCGGCCGAACAGTCATCTCACCTGACCCCAACCTC...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATGGTCCCGGATCACAGACAAGAATTTTGGCCACATaGACTGGCACGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SCPARGGRHCQHGPGSQTRILAT*TGTATS
Trigger: TGAAGTAGCCGTGCCAGTTCATGTGGCCAAAATTCT...TGTCTGTGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACACCTGAATGGCAGCAATaGGTGGCTCCCCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTPEWQQ*VAPHFV
Trigger: CACGAAATGGGGAGCCACTCATTGCTGCCATTCAGG...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTGAGGCACACCCAGGGTaGTGTTCATGGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGEAHPG*CSWRLL
Trigger: GAGTAGCCTCCATGAACATCACCCTGGGTGTGCCTC...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGGACAACCTGGATATGTaGCTGCTGGCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HQASLGAWMCRWSTALSQDNLDM*LLAHLL
Trigger: GAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTC...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCAGGGCACACTGCAGCTaGAGGAAATCCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVRAHCS*RKSQSS
Trigger: GGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCT...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAGCCGTGCAGCCTGGCTaGTGCTGCAGCTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQAVQPG*CCSLPV
Trigger: CACAGGCAAGCTGCAGCAGCAGCCAGGCTGCACGGC...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGAGCCACTGATGGCTTaGTGTCCCACACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTEPLMA*CPTQAI
Trigger: GATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCACTGTCAGATCGTACTaGGAGCAGAGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGTVRSY*EQRSSR
Trigger: CCTGGAAGACCTCTGCTCGCAGTACGATCTGACAGT...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCAATCTGAAGGTCCGGTaGGGCTTAACCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVNLKVR*GLTLAR
Trigger: CCTGGCCAGGGTTAAGCCCCACCGGACCTTCAGATT...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACACAAGGGCCTCTGCTTTaGCTTCCTCTGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTQGPLL*LPLSGE
Trigger: TTCCCCAGACAGAGGAAGCCAAAGCAGAGGCCCTTG...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGCTTTCAGCAGTCCCTaGCCAGGCGTGACATCACCA +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHAFSSP*PGVTSP
Trigger: TGGTGATGTCACGCCTGGCCAGGGACTGCTGAAAGC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTGGGAGGGCTGCCGGTTaGACAAGACCACATCTCCAT +
Preference number: 4 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVGRAAG*TRPHLH
Trigger: ATGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCC...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCGCTTTGGTCCCCATaGGAACAAGGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSSLWSP*EQGPLL
Trigger: AAGCAGAGGCCCTTGTTCTCATGGGGACCAAAGCGA...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATTCGCTTTGGTCCCCATaGGAACAAGGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHSLWSP*EQGPLL
Trigger: AAGCAGAGGCCCTTGTTCTCATGGGGACCAAAGCGA...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGCTTCCACCAGAAGCTTaGACTTCTCCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVELPPEA*TSPSHS
Trigger: AGAGTGGGAAGGAGAAGTTCAAGCTTCTGGTGGAAG...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTACCTGGATATGTGCCTaGTGGCGCATCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVTWICA*WRISSG
Trigger: CCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGT...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACATGATGCTCAGTTTGTaGAGGGAGGGCTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDMMLSL*REGCRL
Trigger: CAACCGGCAGCCCTCCCTGCACAAACTGAGCATCAT...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGATCCCCATCAAAGTCTaGATTGTAGGGGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVEIPIKV*IVGGAD
Trigger: GTCTGCACCCCCTACAATGCAGACTTTGATGGGGAT...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACTGCCACAGTACTGCTTaGCCTTGGTTCGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDCHSTA*PWFGGW
Trigger: CCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCA...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGGTCCCTTTGTCCATaGTGCCGCACATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHGSLCP*CRTSTH
Trigger: GTGAGTTGATGTGCGGCAGCATGGACAAAGGGACCC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGAGAGCAGCATCACGTaGCTCCTGTCGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHESSIT*LLSMLM
Trigger: CATGAGCATCGACAGGAGGCACGTGATGCTGCTCTC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCCAAGGGCCTCTGCTTTaGCTTCCTCTGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVQGPLL*LPLSGE
Trigger: TTCCCCAGACAGAGGAAGCCAAAGCAGAGGCCCTTG...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACAGAAGATGTTGTTCTTaGACCCCGACCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDRRCCS*TPTPGS
Trigger: GGACCCTGGGGTCGGGGTCCAAGAACAACATCTTCT...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
3UTR CAA 72 bp CTCATGCCGTGGTTGACCATCGTGTACTGGATCTCGTaGATGATAGTTGTCCGGGCAGCCTCAATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LMPWLTIVYWIS*MIVVRAASMPR
Trigger: CCTGGGCATTGAGGCTGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp AGGGGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTaGTGTAACAGCTTGAAGAGCCCAGTTCCGATGTTC +
Preference number: 4 (lower is better)
Translates to: RGLLGGLGSLLA*CNSLKSPVPMF
Trigger: GAACATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATAATCCCAGTCCTCCATaGTCATCTGCGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHNPSPP*SSASWL
Trigger: GAGCCAAGACGCAGATGATCATGGAGGACTGGGATT...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACACAATGTCGCCGAACTTaGGCTCCTGAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTQCRRT*APEPSF
Trigger: AAAAGATGGCTCAGGAGCTCAAGTTCGGCGACATTG...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCCCAGTATTGAAGCGATaGTCTGGCAAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVPVLKR*SGKPWL
Trigger: GAGCCAAGGCTTGCCAGATCATCGCTTCAATACTGG...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGCACTGTCTCAGCATTaGCCTCCAGTCTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVALSQH*PPVSEV
Trigger: GACTTCTGAGACTGGAGGTCAATGCTGAGACAGTGC...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAACCTGGATATGTGCCTaGTGGCGCATCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRTWICA*WRISSG
Trigger: CCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGT...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATTCCTCCATGATCATCTaGGTCTTGGCTCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHSSMII*VLAPEI
Trigger: GATCTCCGGAGCCAAGACGCAGATGATCATGGAGGA...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GGATGTGCAGATGGAGTACCGCACTGTCTCAGCATTGACCTCCAGTCTCAGAAGATGATGCTCAGTTTGTaGAGGGAGGGCTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GCADGVPHCLSIDLQSQKMMLSL*REGCRL
Trigger: CAACCGGCAGCCCTCCCTGCACAAACTGAGCATCAT...CTTCTGAGACTGGAGGTCAATGCTGAGACAGTGCGGTACTCCATCTGCACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGACCCTTGCCACAGTACTaGTTGCCCTTGGTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRPLPQY*LPLVRR
Trigger: CCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGG...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGCCGGGCTCACCAATaGTCTGTGCACAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRCRAHQ*SVHRVH
Trigger: GTGCACTCTGTGCACAGAGCATTGGTGAGCCCGGCA...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAGCCCTTCACCAGGCGTaGATAATCCGCGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRALHQA*IIRVVI
Trigger: GATGACGACGCGGATTATGCACGCCTGGTGAAGGGC...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGATTCAAGTTCTCCTaGGCCCTTCCCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HMQVWAHLTILCSNSEMAGFKFS*ALPSRG
Trigger: ACCCCTGCTGGGAAGGGCCCAGGAGAACTTGAATCC...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CAA 72 bp TTGTCCAGAACCCGCTTAAACTCCAGCGGTTCGTCTTaGCCCTCCATGGCAGCAGGATCTAAGCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSRTRLNSSGSS*PSMAAGSKPSP
Trigger: AGGAGATGGCTTAGATCCTGCTGCCATGGAGGGCAAAGACGAACCGCTGGAGTTTAAGCGGGTTCTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp GGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTaGAAGAGCCCAGTTCCGATGTTCATCGGGATTCCC +
Preference number: 4 (lower is better)
Translates to: GGLGSLLALCNS*KSPVPMFIGIP
Trigger: GGGAATCCCGATGAACATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCTGTACAGGTTCTTACTaGCAACCTGGATATGTGCCT +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGCTGSY*QPGYVP
Trigger: AGGCACATATCCAGGTTGTCAGTAAGAACCTGTACA...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGACTGCAGGAAGTTTaGTACAATGGGATCCACGAC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHGLQEV*YNGIHD
Trigger: GTCGTGGATCCCATTGTATCAAACTTCCTGCAGTCC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACGCACCAAAAGTCGGGTaGGAATCAAATCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDAPKVG*ESNQRA
Trigger: AGCCCTCTGATTTGATTCTCACCCGACTTTTGGTGC...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAATCCACCCTCTTCCCTaGCAGATTACCTCTAAATCG +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTIHPLP*QITSKS
Trigger: CGATTTAGAGGTAATCTGTCAGGGAAGAGGGTGGAT...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTCCGAACTTGAGCTCCTaGGCCATCTTTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGPNLSS*AIFSRF
Trigger: AAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGG...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATCCTGTTAAGAAGTCCTaGATGGCAGCAATGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHPVKKS*MAAMSG
Trigger: GCCACTCATTGCTGCCATTCAGGACTTCTTAACAGG...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTACTCATTCTTCTTCATaGTGGCCTCAGCGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGTHSSS*WPQRSR
Trigger: CCTTGACCGCTGAGGCCATCATGAAGAAGAATGAGT...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TCTTGTCCAGCTCGCGGAGGCAGGCACTGCCAGCATGGTCCCGGATCACAGACACACAGTAGTGACAAGTaGTTTTCTTCCGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: SCPARGGRHCQHGPGSQTHSSDK*FSSGIY
Trigger: ATAAATGCCGGAAGAAAAGCACTTGTCACTACTGTG...TGTCTGTGATCCGGGACCATGCTGGCAGTGCCTGCCTCCGCGAGCTGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CTCAGCGGTCAAGGTGAGGTCGTTCTTACTGAGAGCAGGTTCAGTCTGACATGGTCCTCCATGATCATCTaGGTCTTGGCTCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: LSGQGEVVLTESRFSLTWSSMII*VLAPEI
Trigger: GATCTCCGGAGCCAAGACGCAGATGATCATGGAGGA...CCATGTCAGACTGAACCTGCTCTCAGTAAGAACGACCTCACCTTGACCGCTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TCTGGGTGCCGGGCTCACCAATGCTCTGTGCACAGAGTGCACCTACCGCAGAGCAGGAACCTCTTCATCTaGATGTGTCTTTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: SGCRAHQCSVHRVHLPQSRNLFI*MCLCWI
Trigger: TATCCAACAAAGACACATGCAGATGAAGAGGTTCCT...GCTCTGCGGTAGGTGCACTCTGTGCACAGAGCATTGGTGAGCCCGGCACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAAGAGGTCTTCCCCCTTaGCACAGTACTGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRRGLPP*HSTACP
Trigger: AGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCT...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGCGACACCTCTGGGATaGCTTGTACAACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HMQVWAHLTILCSNSEMAATPLG*LVQPPW
Trigger: CCAAGGTGGTTGTACAAGGCATCCCAGAGGTGTCGC...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGCGTGGTTGTTGTCTTaGCTGTACAGGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTAWLLS*LYRFLL
Trigger: CAGTAAGAACCTGTACAGCCAAGACAACAACCACGC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACTGCTGCTTCTCTTCCTaGGACAGCATAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDCCFSS*DSIMWQ
Trigger: CTGCCACATTATGCTGTCCCAGGAAGAGAAGCAGCA...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGCGGGACATCTTCAGCTaGGATGCGCTTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: HQASLGAWMCRWSTALSQRDIFS*DALKQV
Trigger: AACTTGTTTAAGCGCATCCCAGCTGAAGATGTCCCG...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCATTGAAGCGATGATCTaGCAAGCCTTGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSIEAMI*QALARS
Trigger: TGACCGAGCCAAGGCTTGCCAGATCATCGCTTCAAT...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CATGAACGGCCACATCACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTATTGAAGCGATGATCTaGCAAGCCTTGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: HERPHHQASLGAWMCRWSIEAMI*QALARS
Trigger: TGACCGAGCCAAGGCTTGCCAGATCATCGCTTCAAT...ACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTGATGTGGCCGTTCATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACTGGCCACAAAGCCTTTaGCAGCAGGGAGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDWPQSL*QQGALN
Trigger: ATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCA...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCCAGAGTAAAAGCTATTaGCCACAAAGCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGQSKSY*PQSLWQ
Trigger: CTGCCAAAGGCTTTGTGGCCAATAGCTTTTACTCTG...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAACCTACCGCAGAGCCTaGCTCCATCTGTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HMQVWAHLTILCSNSEMATYRRA*LHLCSH
Trigger: ATGAGAGCACAGATGGAGCCAGGCTCTGCGGTAGGT...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTTTTGCCAACCAGTATTaGAGCGATGATCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGFANQY*SDDLAS
Trigger: GCTTGCCAGATCATCGCTTCAATACTGGTTGGCAAA...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGCTCATGCCGTGGTTaGCCATCGTGTACTGGATCT +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRCSCRG*PSCTGS
Trigger: AGATCCAGTACACGATGGTCAACCACGGCATGAGCA...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAGACAACCTGGATATGTaGCTGCTGGCGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQDNLDM*LLAHLL
Trigger: GAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTC...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCTGTGGCAGCAGGTTTTaGAGATCATCTGTAAGATAC +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGCGSRF*RSSVRY
Trigger: GTATCTTACAGATGATCTGCAAAACCTGCTGCCACA...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CTCCTTCATCTTGGCCAGGCCAAACCTGGTTATACCCAGGACTTCACCCTTGTAGAGAACAAGGGCCTCTaGTTTGGCTTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLHLGQAKPGYTQDFTLVENKGL*FGFLCL
Trigger: CAGACAGAGGAAGCCAAAGCAGAGGCCCTTGTTCTC...TACAAGGGTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGCCCTTGCCACAGTACTaGTTGCCCTTGGTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQPLPQY*LPLVRR
Trigger: CCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGG...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCGCCTGGCTCCATCTGTaGTCTCATATACTTATCCCT +
Preference number: 4 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSAWLHL*SHILIP
Trigger: AGGGATAAGTATATGAGAGCACAGATGGAGCCAGGC...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCGGGACATCTTCAGCTaGGATGCGCTTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDRDIFS*DALKQV
Trigger: AACTTGTTTAAGCGCATCCCAGCTGAAGATGTCCCG...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACATTTGGCCACATGAACTaGCACGGCTACTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTFGHMN*HGYFIN
Trigger: ATTGATGAAGTAGCCGTGCCAGTTCATGTGGCCAAA...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTGGTTTGGCCACATGAACTaGCACGGCTACTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: SITCLLSMLMPWLTIVYWFGHMN*HGYFIN
Trigger: ATTGATGAAGTAGCCGTGCCAGTTCATGTGGCCAAA...CCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTTCCTGGGTGAACATCTaGGCCATTTCGAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGSWVNI*AISNQF
Trigger: AAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGA...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTTGGCTCCCCATTTCGTaGGGTTACAAGGTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVWLPIS*GYKVRF
Trigger: AAAGCGAACCTTGTAACCCCACGAAATGGGGAGCCA...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TGCACTCAGACACTCCGCATACAGAGTCTTTCTGCCCAAAGTAGGCAGCATCAACCTTGGTTCGGAGGTTaGCCCGCACTGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: CTQTLRIQSLSAQSRQHQPWFGG*PALDCH
Trigger: ATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGG...TTGATGCTGCCTACTTTGGGCAGAAAGACTCTGTATGCGGAGTGTCTGAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACTTAGTAGCTCATACTTaGCTTTCAGCAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDLVAHT*LSAVPG
Trigger: GCCAGGGACTGCTGAAAGCCAAGTATGAGCTACTAA...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGCAGCACATAATACATaGAGCTCTTGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTAAHNT*SSCCFP
Trigger: GGGAAAACAGCAAGAGCTCCATGTATTATGTGCTGC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp TGCACTCAGACACTCCGCATACAGAGTCTTTCTGCCCAAAGTAGGCAGCATCAAAATCCCAGTCCTCCATaGTCATCTGCGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CTQTLRIQSLSAQSRQHQNPSPP*SSASWL
Trigger: GAGCCAAGACGCAGATGATCATGGAGGACTGGGATT...TTGATGCTGCCTACTTTGGGCAGAAAGACTCTGTATGCGGAGTGTCTGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGTCTGTGATATGTTTATaGAGGAACCTTTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLSVICL*RNLWSH
Trigger: GTGGCTCCAAAGGTTCCTTCATAAACATATCACAGA...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGACAGGCAATCATCTGTaGTATGTTTATGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVETGNHL*YVYEGT
Trigger: GGTTCCTTCATAAACATATCACAGATGATTGCCTGT...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCTTGTGCCGTTATCATTaGTCCCATATTTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGLCRYH*SHIYLW
Trigger: CCAGAGATAAATATGGGATCAATGATAACGGCACAA...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCAAATCTAGAAACTGCTaGTTCTCTTCCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSKSRNC*FSSWDS
Trigger: GCTGTCCCAGGAAGAGAAGCAGCAGTTTCTAGATTT...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACAAATCTAGAAACTGCTaGTTCTCTTCCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDKSRNC*FSSWDS
Trigger: GCTGTCCCAGGAAGAGAAGCAGCAGTTTCTAGATTT...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAAGAAAATCTAGAAACTaGTGCTTCTCTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTRKSRN*CFSSWD
Trigger: GTCCCAGGAAGAGAAGCAGCAGTTTCTAGATTTTCT...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGTGCCACAGTACTGCTTaGCCTTGGTTCGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQCHSTA*PWFGGW
Trigger: CCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCA...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATCCCTTTGTCCATGCTaGCGCACATCAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRSLCPC*RTSTHC
Trigger: ACAGTGAGTTGATGTGCGGCAGCATGGACAAAGGGA...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGCTGCTTCTCTTCCTaGGACAGCATAATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRCCFSS*DSIMWQ
Trigger: CTGCCACATTATGCTGTCCCAGGAAGAGAAGCAGCA...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACATCAGGTCATCTTCATTaGTTCCAGACTTCAGATCAC +
Preference number: 4 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTSGHLH*FQTSDH
Trigger: GTGATCTGAAGTCTGGAACCAATGAAGATGACCTGA...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAATTAACCCTGGCCAGGTaGGCCATGATGCTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQLTLAR*AMMLSL
Trigger: CAAACTGAGCATCATGGCCCACCTGGCCAGGGTTAA...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAGCTTCACTCGGAGCTTaGATGTGCAGATGGAGTACC +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQASLGA*MCRWST
Trigger: GGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGC...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
3UTR CAA 72 bp AGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTaGACCATCGTGTACTGGATCTCGTTGATGATAGTT +
Preference number: 4 (lower is better)
Translates to: SITCLLSMLMPW*TIVYWISLMIV
Trigger: AACTATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp TCAAAGGAGGCCAGCATCAACACACTCTCCTTCATCTaGGCCAGGCCAAACCTGGTTATACCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SKEASINTLSFI*ARPNLVIPRTS
Trigger: TGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGTTGATGCTGGCCTCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAGCACCAAAAGTCGGGTaGGAATCAAATCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQAPKVG*ESNQRA
Trigger: AGCCCTCTGATTTGATTCTCACCCGACTTTTGGTGC...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCAGAAAATCTAGAAACTaGTGCTTCTCTTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSRKSRN*CFSSWD
Trigger: GTCCCAGGAAGAGAAGCAGCAGTTTCTAGATTTTCT...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAATGTTTTTATTTCCTaGAGGAAGCTGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLNVFIS*RKLSWQ
Trigger: CTGCCAAGACAGCTTCCTGCAGGAAATAAAAACATT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAATTCTTACTGACAACCTaGATATGTGCCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQFLLTT*ICACWR
Trigger: GCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAA...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTTGCATGTGTCTTTGTTaGATAAAATTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGCMCLC*IKLAPG
Trigger: CCCAGGAGCCAATTTTATCCAACAAAGACACATGCA...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGTTAACCCTGGCCAGGTaGGCCATGATGCTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQLTLAR*AMMLSL
Trigger: CAAACTGAGCATCATGGCCCACCTGGCCAGGGTTAA...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CAA 72 bp AATATGGATGACAGCTCGCGACACCTCTGGGATGCCTaGTACAACCACCTTGGGCAGATCCTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: NMDDSSRHLWDA*YNHLGQILFEK
Trigger: TTTCTCAAAGAGGATCTGCCCAAGGTGGTTGTACAAGGCATCCCAGAGGTGTCGCGAGCTGTCATCCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp ATCCTGCTCCATTTCCCACAACAGATTGCTATGCAATaGCTGGGAGAAGAGAGAGCAAATGTCGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ILLHFPQQIAMQ*LGEERANVGVS
Trigger: GCTGACCCCGACATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAAGAATTTTGGCCACATaGACTGGCACGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQRILAT*TGTATS
Trigger: TGAAGTAGCCGTGCCAGTTCATGTGGCCAAAATTCT...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGCCTGTTAAGAAGTCCTaGATGGCAGCAATGAGTGGC +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQPVKKS*MAAMSG
Trigger: GCCACTCATTGCTGCCATTCAGGACTTCTTAACAGG...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTATCCCAGTATTGAAGCGATaGTCTGGCAAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVQHTRLCCAVIIDPIFIPVLKR*SGKPWL
Trigger: GAGCCAAGGCTTGCCAGATCATCGCTTCAATACTGG...GATAAATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTCACAGTAGTGACAAGTaGTTTTCTTCCGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGHSSDK*FSSGIY
Trigger: ATAAATGCCGGAAGAAAAGCACTTGTCACTACTGTG...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CTGGGTGGTTTGGGGTCCCTGTTGGCTTTGTGTAACAGCTTGAAGAGCCCAGTTGCTGTCTCAAAGGACTaGAGGAAGTTTGATACAATG +
Preference number: 4 (lower is better)
Translates to: LGGLGSLLALCNSLKSPVAVSKD*RKFDTM
Trigger: CATTGTATCAAACTTCCTGCAGTCCTTTGAGACAGC...AACTGGGCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCCCAAACCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCAGGAACCTCTTCATCTaGATGTGTCTTTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVRNLFI*MCLCWI
Trigger: TATCCAACAAAGACACATGCAGATGAAGAGGTTCCT...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GGAGCTTTGAATGCTTCTCAAAGTGAGGCAAAGATCTGTTCTCAAAGCCATCTGAGAGGTCTTCCCCCTTaGCACAGTACTGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GALNASQSEAKICSQSHLRGLPP*HSTACP
Trigger: AGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCT...CAGATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AAGCTTGAACTTCTCCTTCCCACTCTGCTCGTCAATATGGATGACAGCTCGCGATGGGACAGCATAATGTaGCAGCAGGTTTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: KLELLLPTLLVNMDDSSRWDSIM*QQVLQI
Trigger: GATCTGCAAAACCTGCTGCCACATTATGCTGTCCCA...TCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTATCAATGGCAGCAATGAGTaGCTCCCCATTTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVQHTRLCCAVIIDPIFINGSNE*LPISWG
Trigger: ACCCCACGAAATGGGGAGCCACTCATTGCTGCCATT...GATAAATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGGTAATACGGTCCAACTaGTACAGCACACGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQVIRSN*YSTRGS
Trigger: AGAGCCTCGTGTGCTGTACCAGTTGGACCGTATTAC...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp AAGCTTGAACTTCTCCTTCCCACTCTGCTCGTCAATATGGATGACAGCTCGCGATGTACAGGTTCTTACTaGCAACCTGGATATGTGCCT +
Preference number: 4 (lower is better)
Translates to: KLELLLPTLLVNMDDSSRCTGSY*QPGYVP
Trigger: AGGCACATATCCAGGTTGTCAGTAAGAACCTGTACA...TCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGTTTCCTCAAAAAGTTaGTGTTTGCTTTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHVSSKS*CLLCSP
Trigger: AGGTGAACAAAGCAAACATCAACTTTTTGAGGAAAC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGAATGCTTCTCAAAGTaGGGCAAAGATCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HMQVWAHLTILCSNSEMAECFSK*GKDLFS
Trigger: TGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTC...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGCTCTGTGCACAGAGTaGACCTACCGCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRALCTE*TYRRAW
Trigger: CCAGGCTCTGCGGTAGGTGCACTCTGTGCACAGAGC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGCAGGCACTGCCAGCATaGTCCCGGATCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRQALPA*SRITDS
Trigger: GCTGTCTGTGATCCGGGACCATGCTGGCAGTGCCTG...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp CTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTATCATCCACCCTCTTCCCTaGCAGATTACCTCTAAATCG +
Preference number: 4 (lower is better)
Translates to: LVQHTRLCCAVIIDPIFIIHPLP*QITSKS
Trigger: CGATTTAGAGGTAATCTGTCAGGGAAGAGGGTGGAT...GATAAATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGGGAGGGCTGCCGGTTaGACAAGACCACATCTCCAT +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRGRAAG*TRPHLH
Trigger: ATGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGAGGGCACACTGCAGCTaGAGGAAATCCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRRAHCS*RKSQSS
Trigger: GGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCT...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GGAGCTTTGAATGCTTCTCAAAGTGAGGCAAAGATCTGTTCTCAAAGCCATCTGATGACACTGAAGATCTaGTTTCCGGTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GALNASQSEAKICSQSHLMTLKI*FPVHRV
Trigger: CACCCTGTGGACCGGAAAGCAGATCTTCAGTGTCAT...CAGATGGCTTTGAGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GCTCCATCTGTGCTCTCATATACTTATCCCTACAGGTCTCCAGAAACTTCTCTATTCTTACTGACAACCTaGATATGTGCCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: APSVLSYTYPYRSPETSLFLLTT*ICACWR
Trigger: GCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAA...TAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTATATGAGAGCACAGATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AGCACAAGGCAAATCCTGCTCCATTTCCCACAACAGATTGCTATGCAATTGCTGGCGTGGTTGTTGTCTTaGCTGTACAGGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: STRQILLHFPQQIAMQLLAWLLS*LYRFLL
Trigger: CAGTAAGAACCTGTACAGCCAAGACAACAACCACGC...CAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGCTCGTACCCATTCTATaGTCAAGCACTCCATACAAC +
Preference number: 4 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQLVPIL*SSTPYN
Trigger: GTTGTATGGAGTGCTTGACCATAGAATGGGTACGAG...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp CTGTCGATGCTCATGCCGTGGTTGACCATCGTGTACTGGATCTCGTTGATGATATCAGGTCATCTTCATTaGTTCCAGACTTCAGATCAC +
Preference number: 4 (lower is better)
Translates to: LSMLMPWLTIVYWISLMISGHLH*FQTSDH
Trigger: GTGATCTGAAGTCTGGAACCAATGAAGATGACCTGA...TATCATCAACGAGATCCAGTACACGATGGTCAACCACGGCATGAGCATCGACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp TTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTaGTCTGACCATGGTAAATTTATGCAGACATCTGTT +
Preference number: 4 (lower is better)
Translates to: FPSKELLLRAWT*SDHGKFMQTSV
Trigger: AACAGATGTCTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
3UTR CAA 72 bp AGCTATTGGCCACAAAGCCTTTGGCAGCAGGGAGCTTaGAATGCTTCTCAAAGTGAGGCAAAGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYWPQSLWQQGA*NASQSEAKICS
Trigger: AGAACAGATCTTTGCCTCACTTTGAGAAGCATTCAAAGCTCCCTGCTGCCAAAGGCTTTGTGGCCAATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp TCCAGTCTCAGAAGTCGGATCCGTTCCAGGGAGAGCTaGACAAGAATAAAGCAGTCATCAGGAAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SSLRSRIRSRES*TRIKQSSGRNT
Trigger: AGTGTTTCTTCCTGATGACTGCTTTATTCTTGTCAAGCTCTCCCTGGAACGGATCCGACTTCTGAGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
3UTR CAA 72 bp GCACAAGGCAAATCCTGCTCCATTTCCCACAACAGATaGCTATGCAATTGCTGGGAGAAGAGAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: AQGKSCSISHNR*LCNCWEKREQM
Trigger: CATTTGCTCTCTCTTCTCCCAGCAATTGCATAGCAATCTGTTGTGGGAAATGGAGCAGGATTTGCCTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGGAGAACAAGGGCCTCTaGTTTGGCTTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRENKGL*FGFLCL
Trigger: CAGACAGAGGAAGCCAAAGCAGAGGCCCTTGTTCTC...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGTCGATGCTCATGCCGTaGTTGACCATCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRSMLMP*LTIVYW
Trigger: CCAGTACACGATGGTCAACCACGGCATGAGCATCGA...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
3UTR CAA 72 bp ATACTTATCCCTACAGGTCTCCAGAAACTTCTCTATTaGGGTAGGGGTAATACGGTCCAACTGGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: ILIPTGLQKLLY*GRGNTVQLVQH
Trigger: GTGCTGTACCAGTTGGACCGTATTACCCCTACCCAAATAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAACAAAAAGTTGATGTTTaGTTTGTTCACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQQKVDV*FVHLLR
Trigger: CCTGAGAAGGTGAACAAAGCAAACATCAACTTTTTG...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGTGGCCAGGCCAAACCTaGTTATACCCAGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRWPGQT*LYPGLH
Trigger: GTGAAGTCCTGGGTATAACCAGGTTTGGCCTGGCCA...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR GCA 90 bp TCCAACTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATCAAAAAGTTGATGTTTaGTTTGTTCACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SNWYSTRGSVVPLSLIPYQKVDV*FVHLLR
Trigger: CCTGAGAAGGTGAACAAAGCAAACATCAACTTTTTG...ATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGATCCCCATCAAAGTCTaGATTGTAGGGGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRIPIKV*IVGGAD
Trigger: GTCTGCACCCCCTACAATGCAGACTTTGATGGGGAT...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGATGACACTGAAGATCTaGTTTCCGGTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRMTLKI*FPVHRV
Trigger: CACCCTGTGGACCGGAAAGCAGATCTTCAGTGTCAT...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATCTCGGAGCTTGGATGTaGAGATGGAGTACCGCACTG +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHLGAWM*RWSTAL
Trigger: CAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAG...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGTGGGACAGCATAATGTaGCAGCAGGTTTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRWDSIM*QQVLQI
Trigger: GATCTGCAAAACCTGCTGCCACATTATGCTGTCCCA...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GCTCCATCTGTGCTCTCATATACTTATCCCTACAGGTCTCCAGAAACTTCTCTATGCATGTGTCTTTGTTaGATAAAATTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: APSVLSYTYPYRSPETSLCMCLC*IKLAPG
Trigger: CCCAGGAGCCAATTTTATCCAACAAAGACACATGCA...TAGAGAAGTTTCTGGAGACCTGTAGGGATAAGTATATGAGAGCACAGATGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGCTGTGCTGTGATAATTaGAGTGCTGATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRLCCDN*SADGLG
Trigger: TCCAAGGCCATCAGCACTCCAATTATCACAGCACAG...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGCTTCCGGCATTTATCTaGGATCTTCTTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRLPAFI*DLLLQA
Trigger: GGCCTGAAGAAGAAGATCTCAGATAAATGCCGGAAG...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR TCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGTTTGCCAACCAGTATTaGAGCGATGATCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRFANQY*SDDLAS
Trigger: GCTTGCCAGATCATCGCTTCAATACTGGTTGGCAAA...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAATGGCAGCAATGAGTaGCTCCCCATTTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHNGSNE*LPISWG
Trigger: ACCCCACGAAATGGGGAGCCACTCATTGCTGCCATT...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGTGCAGGAAGCTGTCTTaGCAGCATAGGAACTCATTC +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRCRKLS*QHRNSF
Trigger: GAATGAGTTCCTATGCTGCCAAGACAGCTTCCTGCA...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATCTCTGCTCGTCAATATaGATGACAGCTCGCGACACC +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHLCSSI*MTARDT
Trigger: GGTGTCGCGAGCTGTCATCCATATTGACGAGCAGAG...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATTGGCTCCCCATTTCGTaGGGTTACAAGGTTCGCTTT +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHWLPIS*GYKVRF
Trigger: AAAGCGAACCTTGTAACCCCACGAAATGGGGAGCCA...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR GCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGCTGTCTCAAAGGACTaGAGGAAGTTTGATACAATG +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRAVSKD*RKFDTM
Trigger: CATTGTATCAAACTTCCTGCAGTCCTTTGAGACAGC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATTCCTGGGTGAACATCTaGGCCATTTCGAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHSWVNI*AISNQF
Trigger: AAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGA...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATGCTACTCCTGCAAAGTaGAATGTCTTCAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: IYADICSSKTKFFHSAAHATPAK*NVFSVI
Trigger: GATGACGCTGAAGACATTCCACTTTGCAGGAGTAGC...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGCAGCATCAAAGAGATaGTCAGCTGTCTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRAASKR*SAVFSK
Trigger: CTTTGAAAAGACAGCTGACCATCTCTTTGATGCTGC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR TCA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGGTTTCCTCAAAAAGTTaGTGTTTGCTTTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRVSSKS*CLLCSP
Trigger: AGGTGAACAAAGCAAACATCAACTTTTTGAGGAAAC...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CCA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGTAACAAGAGGGATGTaGAATTCATGTGTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: YADICSSKTKFFHSAAHRVTRGM*NSCVSN
Trigger: ATTTGACACACATGAATTCCACATCCCTCTTGTTAC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CTGGCAAGCCGAGACATGGCATCGGCAGCCTCATTCTGCCCCCAGTCTCGTAGCATGATCATCTGCGTCTaGGCTCCGGAGATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: LASRDMASAASFCPQSRSMIICV*APEIRC
Trigger: GCACCGGATCTCCGGAGCCAAGACGCAGATGATCAT...GCTACGAGACTGGGGGCAGAATGAGGCTGCCGATGCCATGTCTCGGCTTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCGCCATGATGCTCAGTTaGTGCAGGGAGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGAMMLS*CREGCR
Trigger: CCGGCAGCCCTCCCTGCACAAACTGAGCATCATGGC...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGGGGGCTGTTGCTCTaGTCCAGCTCGCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLRGLLL*SSSRRQ
Trigger: CTGCCTCCGCGAGCTGGACAAGAGCAACAGCCCCCT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CTGGCAAGCCGAGACATGGCATCGGCAGCCTCATTCTGCCCCCAGTCTCGTAGCTTGCCACAGTACTGCTaGCCCTTGGTTCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LASRDMASAASFCPQSRSLPQYC*PLVRRL
Trigger: CAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAA...GCTACGAGACTGGGGGCAGAATGAGGCTGCCGATGCCATGTCTCGGCTTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTATGGTGAGGGGGCTGTaGCTCTTGTCCAGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: QFPSKELLLRAWTLSDHGMVRGL*LLSSSR
Trigger: CCGCGAGCTGGACAAGAGCAACAGCCCCCTCACCAT...ACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp GTTGTCCAGAACCCGCTTAAACTCCAGCGGTTCGTCTTTGCCCTCCATGGCAGCAGGGAGGGCTGCCGGTaGAACAAGACCACATCTCCA +
Preference number: 5 (lower is better)
Translates to: VVQNPLKLQRFVFALHGSREGCR*NKTTSP
Trigger: TGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCCT...GCTGCCATGGAGGGCAAAGACGAACCGCTGGAGTTTAAGCGGGTTCTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AGCGTTGATGATCTCTTTGATCCGAGGCACACCCAGGGTGATGTTCATGGAGGCGCCATGATGCTCAGTTaGTGCAGGGAGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SVDDLFDPRHTQGDVHGGAMMLS*CREGCR
Trigger: CCGGCAGCCCTCCCTGCACAAACTGAGCATCATGGC...GCCTCCATGAACATCACCCTGGGTGTGCCTCGGATCAAAGAGATCATCAACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCCAGAGGTCTTCCCCCTaGCCACAGTACTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVQRSSP*PQYCLP
Trigger: GGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTG...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACTCCAGCGGTTCGTCTTaGCCCTCCATGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDSSGSS*PSMAAG
Trigger: TCCTGCTGCCATGGAGGGCAAAGACGAACCGCTGGA...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTCTCCTGGGTGGTTaGGGGTCCCTGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHGLLGG*GSLLAL
Trigger: CAAAGCCAACAGGGACCCCAAACCACCCAGGAGACC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS GCA 90 bp GATAAGGAGTCGTTGACGCAGAGGTCTTCCCCCTTGCCACAGTACTaGTTGCCCTTGGTTCGGAGGTTGGCCCGCACTGGATTGTCATCA +
Preference number: 5 (lower is better)
Translates to: DKESLTQRSSPLPQY*LPLVRRLARTGLSS
Trigger: TGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAACAAGGGGGCGTGGTaGTTGTCTTGGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLNKGAW*LSWLYR
Trigger: CCTGTACAGCCAAGACAACAACCACGCCCCCTTGTT...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGAACAAGGGGGCGTGGTaGTTGTCTTGGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: HQASLGAWMCRWSTALSQNKGAW*LSWLYR
Trigger: CCTGTACAGCCAAGACAACAACCACGCCCCCTTGTT...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCATGATCATCTGCGTCTaGGCTCCGGAGATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVMIICV*APEIRC
Trigger: GCACCGGATCTCCGGAGCCAAGACGCAGATGATCAT...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCGGAGTGCTGATGGCCTaGGAAGCGTTGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGGVLMA*EALMIS
Trigger: AGAGATCATCAACGCTTCCAAGGCCATCAGCACTCC...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACAGGCTTCACTCGGAGCTaGGATGTGCAGATGGAGTAC +
Preference number: 5 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTGFTRS*DVQMEY
Trigger: GTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCC...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp AGCATTGAGAAACCAGGACTGGGTCCTAGTCTCTGTGGGCCAGCCTGGCTCACATTCTTAGGTGCCATGTaGAGAGGGATGCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SIEKPGLGPSLCGPAWLTFLGAM*RGMPES
Trigger: GCTCTCTGGCATCCCTCTCAACATGGCACCTAAGAA...TGTGAGCCAGGCTGGCCCACAGAGACTAGGACCCAGTCCTGGTTTCTCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CACCAGGCTTCACTCGGAGCTTGGATGTGCAGATGGAGTACCGCACTGTCTCAGATGATCTGGCAAGCCTaGGCTCGGTCAAAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HQASLGAWMCRWSTALSQMIWQA*ARSKKV
Trigger: CACCTTCTTTGACCGAGCCAAGGCTTGCCAGATCAT...CTGAGACAGTGCGGTACTCCATCTGCACATCCAAGCTCCGAGTGAAGCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATTTGCCACAGTACTGCTaGCCCTTGGTTCGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHLPQYC*PLVRRL
Trigger: CAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAA...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGTTTATGAAGGAACCTTaGGAGCCACACAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVEFMKEP*EPHRAM
Trigger: CATGGCCCTGTGTGGCTCCAAAGGTTCCTTCATAAA...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGTCCGCGTCGTCATCCTaGTCTAGCTGTGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: HLTILCSNSEMAGVVSWLSASSS*SSCAVI
Trigger: TATCACAGCACAGCTAGACAAGGATGACGACGCGGA...CAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS TCA 90 bp ACAACAAGGGGGCGTGGTTGTTGTCTTGGCTGTACAGGTTCTTACTaGCAACCTGGATATGTGCCTGCTGGCGCATCTCCTCAGGGGACT +
Preference number: 5 (lower is better)
Translates to: TTRGRGCCLGCTGSY*QPGYVPAGASPQGT
Trigger: AGTCCCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 90 bp GGGGCGTGGTTGTTGTCTTGGCTGTACAGGTTCTTACTGACAACCTaGATATGTGCCTGCTGGCGCATCTCCTCAGGGGACTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: GAWLLSWLYRFLLTT*ICACWRISSGDFIP
Trigger: TGGAATGAAGTCCCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGCAGTACTGCTTGCCCTaGGTTCGGAGGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQQYCLP*VRRLAR
Trigger: GCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTG...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 90 bp TTTCCCCTTCAGGCGCTGCACAAAGCCTCGCGTCCATTTCTTAGGTaGCATGTTGAGAGGGATGCCAGAGAGCTCACTGTTGATGTAGAG +
Preference number: 5 (lower is better)
Translates to: FPLQALHKASRPFLR*HVERDARELTVDVE
Trigger: CTCTACATCAACAGTGAGCTCTCTGGCATCCCTCTCAACATGGCACCTAAGAAATGGACGCGAGGCTTTGTGCAGCGCCTGAAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 90 bp CCTGACAGATTACCTCTAAATCGACCCTGTTTCCCCTTCAGGCGCTaGACAAAGCCTCGCGTCCATTTCTTAGGTGCCATGTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: PDRLPLNRPCFPFRR*TKPRVHFLGAMLRG
Trigger: CCCTCTCAACATGGCACCTAAGAAATGGACGCGAGGCTTTGTGCAGCGCCTGAAGGGGAAACAGGGTCGATTTAGAGGTAATCTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 90 bp CTTGCCACAGTACTGCTTGCCCTTGGTTCGGAGGTTGGCCCGCACTaGATTGTCATCACTAGGTCTGAGGATGACACTGAAGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: LATVLLALGSEVGPH*IVITRSEDDTEDLL
Trigger: AAGCAGATCTTCAGTGTCATCCTCAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GTTGTCCAGAACCCGCTTAAACTCCAGCGGTTCGTCTTTGCCCTCCATGGCAGCAGGACTGCAGGAAGTTaGATACAATGGGATCCACGA +
Preference number: 5 (lower is better)
Translates to: VVQNPLKLQRFVFALHGSRTAGS*IQWDPR
Trigger: TCGTGGATCCCATTGTATCAAACTTCCTGCAGTCCT...GCTGCCATGGAGGGCAAAGACGAACCGCTGGAGTTTAAGCGGGTTCTGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCGTCAGGTCATCTTCATaGGTTCCAGACTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGVRSSS*VPDFRS
Trigger: TGATCTGAAGTCTGGAACCAATGAAGATGACCTGAC...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCCTGCATGTGTCTTTGTaGGATAAAATTGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GPSVKRIPVPIQGAPAEGLHVSL*DKIGSW
Trigger: CCAGGAGCCAATTTTATCCAACAAAGACACATGCAG...GCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GAATCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACGTGTACTGGATCTCGTaGATGATAGTTGTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: ESQFPSKELLLRAWTLSDVYWIS*MIVVRA
Trigger: TGCCCGGACAACTATCATCAACGAGATCCAGTACAC...GTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCGCTTTGTGTAACAGCTaGAAGAGCCCAGTTCCGATG +
Preference number: 5 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVALCNS*KSPVPM
Trigger: CATCGGAACTGGGCTCTTCAAGCTGTTACACAAAGC...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp GTTGACCATCGTGTACTGGATCTCGTTGATGATAGTTGTCCGGGCAGCCTCAATAAGGGGGCGTGGTTGTaGTCTTGGCTGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: VDHRVLDLVDDSCPGSLNKGAWL*SWLYRF
Trigger: GAACCTGTACAGCCAAGACAACAACCACGCCCCCTT...ATTGAGGCTGCCCGGACAACTATCATCAACGAGATCCAGTACACGATGGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TGCAGCAACAGTGAGATGGCAGGGGTCGTGAGCTGGCTGAGCAGCAGTGTTGAGATGTGGCAGCAGGTTTaGCAGATCATCTGTAAGATA +
Preference number: 5 (lower is better)
Translates to: CSNSEMAGVVSWLSSSVEMWQQV*QIICKI
Trigger: TATCTTACAGATGATCTGCAAAACCTGCTGCCACAT...CTCAACACTGCTGCTCAGCCAGCTCACGACCCCTGCCATCTCACTGTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCATCATCAATCCGGAGGTaGGGGTCAGGTGAGATGACT +
Preference number: 5 (lower is better)
Translates to: HMQVWAHLTILCSNSEMASSIRR*GSGEMT
Trigger: AGTCATCTCACCTGACCCCAACCTCCGGATTGATGA...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAATGATCTGGCAAGCCTaGGCTCGGTCAAAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRMIWQA*ARSKKV
Trigger: CACCTTCTTTGACCGAGCCAAGGCTTGCCAGATCAT...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTATCCCCTTGGTTCGGAGGTaGGCCCGCACTGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LVQHTRLCCAVIIDPIFIPLVRR*ARTGLS
Trigger: TGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGG...GATAAATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATTTTAGTAGCTCATACTaGGCTTTCAGCAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHFSSSY*AFSSPW
Trigger: CCAGGGACTGCTGAAAGCCAAGTATGAGCTACTAAA...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGGGAGCCACTGATGGCTaGCTGTCCCACACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQGATDG*LSHTGN
Trigger: ATTGCCTGTGTGGGACAGCAAGCCATCAGTGGCTCC...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAACCTCCCGACCGGCCATaGTGTGGAAGAAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQPPDRP*CGRKTQ
Trigger: CTGAGTTTTTCTTCCACACAATGGCCGGTCGGGAGG...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCACGCACTGTCTCAGCATaGACCTCCAGTCTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HMQVWAHLTILCSNSEMARTVSA*TSSLRS
Trigger: ACTTCTGAGACTGGAGGTCAATGCTGAGACAGTGCG...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAATGCTCATGCCGTGGTaGACCATCGTGTACTGGATC +
Preference number: 5 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRMLMPW*TIVYWI
Trigger: GATCCAGTACACGATGGTCAACCACGGCATGAGCAT...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS GCA 90 bp CGCACTGGATTGTCATCACTAGGTCTGAGGATGACACTGAAGATCTaGTTTCCGGTCCACAGGGTGACAGGCTTTAGTATTGTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: RTGLSSLGLRMTLKI*FPVHRVTGFSIVGG
Trigger: ACCCCCTACAATACTAAAGCCTGTCACCCTGTGGACCGGAAAGCAGATCTTCAGTGTCATCCTCAGACCTAGTGATGACAATCCAGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 90 bp CTATGGTCAAGCACTCCATACAACAAGGGGGCGTGGTTGTTGTCTTaGCTGTACAGGTTCTTACTGACAACCTGGATATGTGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LWSSTPYNKGAWLLS*LYRFLLTTWICACW
Trigger: CCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGAAGGGGGCGTGGTTGTaGTCTTGGCTGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQKGAWL*SWLYRF
Trigger: GAACCTGTACAGCCAAGACAACAACCACGCCCCCTT...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TCCCAGTTCCCATCCAAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGTCAGGTCATCTTCATaGGTTCCAGACTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: SQFPSKELLLRAWTLSDHVRSSS*VPDFRS
Trigger: TGATCTGAAGTCTGGAACCAATGAAGATGACCTGAC...ATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTTGGATGGGAACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AAGCTTGAACTTCTCCTTCCCACTCTGCTCGTCAATATGGATGACAGCTCGCGATCATCAATCCGGAGGTaGGGGTCAGGTGAGATGACT +
Preference number: 5 (lower is better)
Translates to: KLELLLPTLLVNMDDSSRSSIRR*GSGEMT
Trigger: AGTCATCTCACCTGACCCCAACCTCCGGATTGATGA...TCGCGAGCTGTCATCCATATTGACGAGCAGAGTGGGAAGGAGAAGTTCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGGCGTTGATGATCTCTTaGATCCGAGGCACACCCAGG +
Preference number: 5 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQALMIS*IRGTPR
Trigger: CCTGGGTGTGCCTCGGATCAAAGAGATCATCAACGC...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp CACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCACCTTGTACAACCACCTaGGGCAGATCCTCTTTGAGA +
Preference number: 5 (lower is better)
Translates to: HMQVWAHLTILCSNSEMAPCTTT*GRSSLR
Trigger: TCTCAAAGAGGATCTGCCCAAGGTGGTTGTACAAGG...TGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS GCA 90 bp AGGGCACACTGCAGCTGCAGGAAATCCCAGTCCTCCATGATCATCTaGGTCTTGGCTCCGGAGATCCGGTGCTTTTTAATAACATCATTT +
Preference number: 5 (lower is better)
Translates to: RAHCSCRKSQSSMII*VLAPEIRCFLITSF
Trigger: AAATGATGTTATTAAAAAGCACCGGATCTCCGGAGCCAAGACGCAGATGATCATGGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TGGCTCACATGCAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGAAGGACTGCAGGAAGTTaGATACAATGGGATCCACGA +
Preference number: 5 (lower is better)
Translates to: WLTCRYGHTLQSSAATVRRTAGS*IQWDPR
Trigger: TCGTGGATCCCATTGTATCAAACTTCCTGCAGTCCT...TCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTGCATGTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GAGAGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTGGTTGACCATCGTGAAGTTGATGTTTGCTTaGTTCACCTTCTCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ESSITCLLSMLMPWLTIVKLMFA*FTFSGK
Trigger: TTTTCCTGAGAAGGTGAACAAAGCAAACATCAACTT...CACGATGGTCAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGTTTGGGGTCCCTGTTGGCTTCTGCATGTGTCTTTGTaGGATAAAATTGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HVCQISGVSWVVWGPCWLLHVSL*DKIGSW
Trigger: CCAGGAGCCAATTTTATCCAACAAAGACACATGCAG...AAGCCAACAGGGACCCCAAACCACCCAGGAGACCCCTGATATTTGACACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCCATCTGCATGTGTCTTaGTTGGATAAAATTGGCTCC +
Preference number: 5 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVHLHVS*LDKIGS
Trigger: GGAGCCAATTTTATCCAACAAAGACACATGCAGATG...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TCAGCAGCACATAGGACAAGGATCAAGGTCAGAGATGGTGACCTCTTGCCACAAGTGCAGACACATTCATaGAATCTGAAGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: SAAHRTRIKVRDGDLLPQVQTHS*NLKVRW
Trigger: CCACCGGACCTTCAGATTCAATGAATGTGTCTGCAC...TTGTGGCAAGAGGTCACCATCTCTGACCTTGATCCTTGTCCTATGTGCTGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 90 bp CCACATCTCCATCTATCAGGTGTCTCTCTACAATGTCGCCGAACTTaGGCTCCTGAGCCATCTTTTCCCGATTTCCATACTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: PHLHLSGVSLQCRRT*APEPSFPDFHTSGT
Trigger: GGTTCCTGAAGTATGGAAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGGCGACATTGTAGAGAGACACCTGATAGATGGAGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 90 bp TTGTCTTGGCTGTACAGGTTCTTACTGACAACCTGGATATGTGCCTaGTGGCGCATCTCCTCAGGGGACTTCATTCCAAAACAGATATGG +
Preference number: 5 (lower is better)
Translates to: LSWLYRFLLTTWICA*WRISSGDFIPKQIW
Trigger: CCATATCTGTTTTGGAATGAAGTCCCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 90 bp GTTGTTGTCTTGGCTGTACAGGTTCTTACTGACAACCTGGATATGTaGCTGCTGGCGCATCTCCTCAGGGGACTTCATTCCAAAACAGAT +
Preference number: 5 (lower is better)
Translates to: VVVLAVQVLTDNLDM*LLAHLLRGLHSKTD
Trigger: ATCTGTTTTGGAATGAAGTCCCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 90 bp CTCGTACCCATTCTATGGTCAAGCACTCCATACAACAAGGGGGCGTaGTTGTTGTCTTGGCTGTACAGGTTCTTACTGACAACCTGGATA +
Preference number: 5 (lower is better)
Translates to: LVPILWSSTPYNKGA*LLSWLYRFLLTTWI
Trigger: TATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAGAATGGGTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CTGGTACAGCACACGAGGCTCTGTTGTGCCGTTATCATTGATCCCATATTTATCTTCTTAGGTGCCATGTaGAGAGGGATGCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LVQHTRLCCAVIIDPIFIFLGAM*RGMPES
Trigger: GCTCTCTGGCATCCCTCTCAACATGGCACCTAAGAA...GATAAATATGGGATCAATGATAACGGCACAACAGAGCCTCGTGTGCTGTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AAGGAGCTCCTGCTGAGGGCATGGACTTTGTCTGACCATGGTAAATTTATGCAGGTGCAGACACATTCATaGAATCTGAAGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: KELLLRAWTLSDHGKFMQVQTHS*NLKVRW
Trigger: CCACCGGACCTTCAGATTCAATGAATGTGTCTGCAC...CTGCATAAATTTACCATGGTCAGACAAAGTCCATGCCCTCAGCAGGAGCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGCCCTTGGTTCGGAGGTaGGCCCGCACTGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRPLVRR*ARTGLS
Trigger: TGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGG...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGACCCCAGGGTCCCTTaGTCCATGCTGCCGCACATC +
Preference number: 5 (lower is better)
Translates to: YADICSSKTKFFHSAAHRDPRVP*SMLPHI
Trigger: GATGTGCGGCAGCATGGACAAAGGGACCCTGGGGTC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp GCAGCAGTGTTGAGGTCCCTCAGTGAAGAGAATCCCAGTTCCCATCCAAGGAGCGTTGTGCCGTTATCATaGATCCCATATTTATCTCTG +
Preference number: 5 (lower is better)
Translates to: AAVLRSLSEENPSSHPRSVVPLS*IPYLSL
Trigger: CAGAGATAAATATGGGATCAATGATAACGGCACAAC...GCTCCTTGGATGGGAACTGGGATTCTCTTCACTGAGGGACCTCAACACTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS TCA 90 bp CCATCTATCAGGTGTCTCTCTACAATGTCGCCGAACTTGAGCTCCTaGGCCATCTTTTCCCGATTTCCATACTTCAGGAACCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: PSIRCLSTMSPNLSS*AIFSRFPYFRNLFI
Trigger: GATGAAGAGGTTCCTGAAGTATGGAAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGGCGACATTGTAGAGAGACACCTGATAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp CAGGTATGGGCACACCTTACAATCCTCTGCAGCAACAGTGAGATGGCAGGGGTCAAGTTGATGTTTGCTTaGTTCACCTTCTCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: QVWAHLTILCSNSEMAGVKLMFA*FTFSGK
Trigger: TTTTCCTGAGAAGGTGAACAAAGCAAACATCAACTT...GACCCCTGCCATCTCACTGTTGCTGCAGAGGATTGTAAGGTGTGCCCATACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGAGGGAGGGCTGCCGGTaGAACAAGACCACATCTCCA +
Preference number: 5 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRREGCR*NKTTSP
Trigger: TGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCCT...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGGCTGCTGCTGCAGCTaGCCTGTGTTCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: YADICSSKTKFFHSAAHRGCCCS*PVFRAS
Trigger: TGAAGCCCTGAACACAGGCAAGCTGCAGCAGCAGCC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATCAGTACTGCTTGCCCTaGGTTCGGAGGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: IYADICSSKTKFFHSAAHQYCLP*VRRLAR
Trigger: GCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTG...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp AACAAGAGGGATGTGGAATTCATGTGTGTCAAATATCAGGGGTCTCCTGGGTGGCATCTGCATGTGTCTTaGTTGGATAAAATTGGCTCC +
Preference number: 5 (lower is better)
Translates to: NKRDVEFMCVKYQGSPGWHLHVS*LDKIGS
Trigger: GGAGCCAATTTTATCCAACAAAGACACATGCAGATG...CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATCAGAGGTCTTCCCCCTaGCCACAGTACTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: IYADICSSKTKFFHSAAHQRSSP*PQYCLP
Trigger: GGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTG...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGACACTCTCCTTCATCTaGGCCAGGCCAAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRTLSFI*ARPNLV
Trigger: AACCAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGT...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp ATTTATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATATGACTGCCCGCAGGTaGTCACCTTCCACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: IYADICSSKTKFFHSAAHMTARR*SPSTRS
Trigger: GCTTCTGGTGGAAGGTGACAACCTGCGGGCAGTCAT...ATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGGGGTCCCTGTTGGCTTaGTGTAACAGCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: YADICSSKTKFFHSAAHRGSLLA*CNSLKS
Trigger: GCTCTTCAAGCTGTTACACAAAGCCAACAGGGACCC...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS TCA 90 bp CTCTTCATCTGCATGTGTCTTTGTTGGATAAAATTGGCTCCTGGGTaGACATCTGGGCCATTTCGAACCAGTTTCCTCAAAAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: LFICMCLCWIKLAPG*TSGPFRTSFLKKLM
Trigger: CATCAACTTTTTGAGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGACACATGCAGATGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 90 bp GAACCTCTTCATCTGCATGTGTCTTTGTTGGATAAAATTGGCTCCTaGGTGAACATCTGGGCCATTTCGAACCAGTTTCCTCAAAAAGTT +
Preference number: 5 (lower is better)
Translates to: EPLHLHVSLLDKIGS*VNIWAISNQFPQKV
Trigger: AACTTTTTGAGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGACACATGCAGATGAAGAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGATGGCCTTGGAAGCGTaGATGATCTCTTTGATCCGA +
Preference number: 5 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRMALEA*MISLIR
Trigger: TCGGATCAAAGAGATCATCAACGCTTCCAAGGCCAT...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS-3UTR CAA 90 bp GACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGACAAGGCGTTCCAGGGAGAGCTaGACAAGAATAAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: DICSSKTKFFHSAAHRTRRSRES*TRIKQS
Trigger: TGACTGCTTTATTCTTGTCAAGCTCTCCCTGGAACG...CCTTGTCCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS CCA 90 bp CTGCATGTGTCTTTGTTGGATAAAATTGGCTCCTGGGTGAACATCTaGGCCATTTCGAACCAGTTTCCTCAAAAAGTTGATGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: LHVSLLDKIGSWVNI*AISNQFPQKVDVCF
Trigger: AAAGCAAACATCAACTTTTTGAGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGACACATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS-3UTR CAA 90 bp TATGCAGACATCTGTTCAAGTAAAACAAAGTTCTTCCATTCAGCAGCACATAGGTACACTGCCTTGATGTaGTCCAGAACCCGCTTAAAC +
Preference number: 5 (lower is better)
Translates to: YADICSSKTKFFHSAAHRYTALM*SRTRLN
Trigger: GTTTAAGCGGGTTCTGGACAACATCAAGGCAGTGTA...CCTATGTGCTGCTGAATGGAAGAACTTTGTTTTACTTGAACAGATGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS GCA 72 bp TCGTTGACGCAGAGGTCTTCCCCCTTGCCACAGTACTaGTTGCCCTTGGTTCGGAGGTTGGCCCGCACTGGA +
Preference number: 6 (lower is better)
Translates to: SLTQRSSPLPQY*LPLVRRLARTG
Trigger: TCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp AATCTGAAGGTCCGGTGGGGCTTAACCCTGGCCAGGTaGGCCATGATGCTCAGTTTGTGCAGGGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: NLKVRWGLTLAR*AMMLSLCREGC
Trigger: GCAGCCCTCCCTGCACAAACTGAGCATCATGGCCCACCTGGCCAGGGTTAAGCCCCACCGGACCTTCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp TTGACGCAGAGGTCTTCCCCCTTGCCACAGTACTGCTaGCCCTTGGTTCGGAGGTTGGCCCGCACTGGATTG +
Preference number: 6 (lower is better)
Translates to: LTQRSSPLPQYC*PLVRRLARTGL
Trigger: CAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp ATCTGGAAGGGCGATAAGGAGTCGTTGACGCAGAGGTCTTCCCCCTaGCCACAGTACTGCTTGCCCTTGGTTCGGAGGTTGGCCCGCACT +
Preference number: 6 (lower is better)
Translates to: IWKGDKESLTQRSSP*PQYCLPLVRRLART
Trigger: AGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTTATCGCCCTTCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS CAA 90 bp TCGTTGACGCAGAGGTCTTCCCCCTTGCCACAGTACTGCTTGCCCTaGGTTCGGAGGTTGGCCCGCACTGGATTGTCATCACTAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SLTQRSSPLPQYCLP*VRRLARTGLSSLGL
Trigger: CAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp AGAGGTCTTCCCCCTTGCCACAGTACTGCTTGCCCTTaGTTCGGAGGTTGGCCCGCACTGGATTGTCATCAC +
Preference number: 6 (lower is better)
Translates to: RGLPPCHSTACP*FGGWPALDCHH
Trigger: GTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp CCCTTGCCACAGTACTGCTTGCCCTTGGTTCGGAGGTaGGCCCGCACTGGATTGTCATCACTAGGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PLPQYCLPLVRR*ARTGLSSLGLR
Trigger: CCTCAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp CAGAGGTCTTCCCCCTTGCCACAGTACTGCTTGCCCTaGGTTCGGAGGTTGGCCCGCACTGGATTGTCATCA +
Preference number: 6 (lower is better)
Translates to: QRSSPLPQYCLP*VRRLARTGLSS
Trigger: TGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp GGCGATAAGGAGTCGTTGACGCAGAGGTCTTCCCCCTaGCCACAGTACTGCTTGCCCTTGGTTCGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GDKESLTQRSSP*PQYCLPLVRRL
Trigger: CAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTTATCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS CAA 90 bp AGGTCTTCCCCCTTGCCACAGTACTGCTTGCCCTTGGTTCGGAGGTaGGCCCGCACTGGATTGTCATCACTAGGTCTGAGGATGACACTG +
Preference number: 6 (lower is better)
Translates to: RSSPLPQYCLPLVRR*ARTGLSSLGLRMTL
Trigger: CAGTGTCATCCTCAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp AAGGAGTCGTTGACGCAGAGGTCTTCCCCCTTGCCACAGTACTGCTaGCCCTTGGTTCGGAGGTTGGCCCGCACTGGATTGTCATCACTA +
Preference number: 6 (lower is better)
Translates to: KESLTQRSSPLPQYC*PLVRRLARTGLSSL
Trigger: TAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS CAA 72 bp CTGGATGGTGACATCTGGAAGGGCGATAAGGAGTCGTaGACGCAGAGGTCTTCCCCCTTGCCACAGTACTGC +
Preference number: 6 (lower is better)
Translates to: LDGDIWKGDKES*TQRSSPLPQYC
Trigger: GCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTTATCGCCCTTCCAGATGTCACCATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS TCA 72 bp TGGATGGTGACATCTGGAAGGGCGATAAGGAGTCGTTaGCGCAGAGGTCTTCCCCCTTGCCACAGTACTGCT +
Preference number: 6 (lower is better)
Translates to: WMVTSGRAIRSR*RRGLPPCHSTA
Trigger: AGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAACGACTCCTTATCGCCCTTCCAGATGTCACCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223718.2
CDS GCA 72 bp CAGGCGCTGCACAAAGCCTCGCGTCCATTTCTTAGGTaGCATGTTGAGAGGGATGCCAGAGAGCTCACTGTT +
Preference number: 6 (lower is better)
Translates to: QALHKASRPFLR*HVERDARELTV
Trigger: AACAGTGAGCTCTCTGGCATCCCTCTCAACATGGCACCTAAGAAATGGACGCGAGGCTTTGTGCAGCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp AGGTGGGCCATGATGCTCAGTTTGTGCAGGGAGGGCTaGCGGTTGAACAAGACCACATCTCCATCTATCAGG +
Preference number: 6 (lower is better)
Translates to: RWAMMLSLCREG*RLNKTTSPSIR
Trigger: CCTGATAGATGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCCTGCACAAACTGAGCATCATGGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp AAGATGTTGTTCTTGGACCCCGACCCCAGGGTCCCTTaGTCCATGCTGCCGCACATCAACTCACTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: KMLFLDPDPRVP*SMLPHINSLFW
Trigger: CCAGAACAGTGAGTTGATGTGCGGCAGCATGGACAAAGGGACCCTGGGGTCGGGGTCCAAGAACAACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026322.9
CDS CAA 90 bp GCCAGGTGGGCCATGATGCTCAGTTTGTGCAGGGAGGGCTGCCGGTaGAACAAGACCACATCTCCATCTATCAGGTGTCTCTCTACAATG +
Preference number: 6 (lower is better)
Translates to: ARWAMMLSLCREGCR*NKTTSPSIRCLSTM
Trigger: CATTGTAGAGAGACACCTGATAGATGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCCTGCACAAACTGAGCATCATGGCCCACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp CCACAGTACTGCTTGCCCTTGGTTCGGAGGTTGGCCCGCACTGGATaGTCATCACTAGGTCTGAGGATGACACTGAAGATCTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: PQYCLPLVRRLARTG*SSLGLRMTLKICFP
Trigger: CGGAAAGCAGATCTTCAGTGTCATCCTCAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCAGTACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp GGGCGTGGTTGTTGTCTTGGCTGTACAGGTTCTTACTaGCAACCTGGATATGTGCCTGCTGGCGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: GRGCCLGCTGSY*QPGYVPAGASP
Trigger: AGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp GCCATGATGCTCAGTTTGTGCAGGGAGGGCTGCCGGTaGAACAAGACCACATCTCCATCTATCAGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: AMMLSLCREGCR*NKTTSPSIRCL
Trigger: GAGACACCTGATAGATGGAGATGTGGTCTTGTTCAACCGGCAGCCCTCCCTGCACAAACTGAGCATCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp TGCTTGCCCTTGGTTCGGAGGTTGGCCCGCACTGGATaGTCATCACTAGGTCTGAGGATGACACTGAAGATC +
Preference number: 6 (lower is better)
Translates to: CLPLVRRLARTG*SSLGLRMTLKI
Trigger: GATCTTCAGTGTCATCCTCAGACCTAGTGATGACAATCCAGTGCGGGCCAACCTCCGAACCAAGGGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp CATTTCGTGGGGTTACAAGGTTCGCTTTGGTCCCCATaGGAACAAGGGCCTCTGCTTTGGCTTCCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: HFVGLQGSLWSP*EQGPLLWLPLS
Trigger: AGACAGAGGAAGCCAAAGCAGAGGCCCTTGTTCTCATGGGGACCAAAGCGAACCTTGTAACCCCACGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp TTGGCTGTACAGGTTCTTACTGACAACCTGGATATGTaGCTGCTGGCGCATCTCCTCAGGGGACTTCATTCC +
Preference number: 6 (lower is better)
Translates to: LAVQVLTDNLDM*LLAHLLRGLHS
Trigger: GGAATGAAGTCCCCTGAGGAGATGCGCCAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp TTACCTCTAAATCGACCCTGTTTCCCCTTCAGGCGCTaGACAAAGCCTCGCGTCCATTTCTTAGGTGCCATG +
Preference number: 6 (lower is better)
Translates to: LPLNRPCFPFRR*TKPRVHFLGAM
Trigger: CATGGCACCTAAGAAATGGACGCGAGGCTTTGTGCAGCGCCTGAAGGGGAAACAGGGTCGATTTAGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp TTGCCAACCAGTATTGAAGCGATGATCTGGCAAGCCTaGGCTCGGTCAAAGAAGGTGTCCTTGAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LPTSIEAMIWQA*ARSKKVSLRVR
Trigger: CCTCACCCTCAAGGACACCTTCTTTGACCGAGCCAAGGCTTGCCAGATCATCGCTTCAATACTGGTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp TGGTCAAGCACTCCATACAACAAGGGGGCGTGGTTGTaGTCTTGGCTGTACAGGTTCTTACTGACAACCTGG +
Preference number: 6 (lower is better)
Translates to: WSSTPYNKGAWL*SWLYRFLLTTW
Trigger: CCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp TCTATGGTCAAGCACTCCATACAACAAGGGGGCGTGGTTGTTGTCTaGGCTGTACAGGTTCTTACTGACAACCTGGATATGTGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SMVKHSIQQGGVVVV*AVQVLTDNLDMCLL
Trigger: CAGCAGGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp CCCATTCTATGGTCAAGCACTCCATACAACAAGGGGGCGTGGTTGTaGTCTTGGCTGTACAGGTTCTTACTGACAACCTGGATATGTGCC +
Preference number: 6 (lower is better)
Translates to: PILWSSTPYNKGAWL*SWLYRFLLTTWICA
Trigger: GGCACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp CTATGGTCAAGCACTCCATACAACAAGGGGGCGTGGTaGTTGTCTTGGCTGTACAGGTTCTTACTGACAACC +
Preference number: 6 (lower is better)
Translates to: LWSSTPYNKGAW*LSWLYRFLLTT
Trigger: GGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp AGGTGTCTCTCTACAATGTCGCCGAACTTGAGCTCCTaGGCCATCTTTTCCCGATTTCCATACTTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RCLSTMSPNLSS*AIFSRFPYFRN
Trigger: GTTCCTGAAGTATGGAAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGGCGACATTGTAGAGAGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp AGCACTCCATACAACAAGGGGGCGTGGTTGTTGTCTTaGCTGTACAGGTTCTTACTGACAACCTGGATATGT +
Preference number: 6 (lower is better)
Translates to: STPYNKGAWLLS*LYRFLLTTWIC
Trigger: ACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp GTACCCATTCTATGGTCAAGCACTCCATACAACAAGGGGGCGTGGTaGTTGTCTTGGCTGTACAGGTTCTTACTGACAACCTGGATATGT +
Preference number: 6 (lower is better)
Translates to: VPILWSSTPYNKGAW*LSWLYRFLLTTWIC
Trigger: ACATATCCAGGTTGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAGAATGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp CACTGCAGCTGCAGGAAATCCCAGTCCTCCATGATCATCTGCGTCTaGGCTCCGGAGATCCGGTGCTTTTTAATAACATCATTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: HCSCRKSQSSMIICV*APEIRCFLITSFRK
Trigger: TTTCCTAAATGATGTTATTAAAAAGCACCGGATCTCCGGAGCCAAGACGCAGATGATCATGGAGGACTGGGATTTCCTGCAGCTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp CATCTATCAGGTGTCTCTCTACAATGTCGCCGAACTTaGGCTCCTGAGCCATCTTTTCCCGATTTCCATACT +
Preference number: 6 (lower is better)
Translates to: HLSGVSLQCRRT*APEPSFPDFHT
Trigger: AGTATGGAAATCGGGAAAAGATGGCTCAGGAGCTCAAGTTCGGCGACATTGTAGAGAGACACCTGATAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp TTGTCATCACTAGGTCTGAGGATGACACTGAAGATCTaGTTTCCGGTCCACAGGGTGACAGGCTTTAGTATT +
Preference number: 6 (lower is better)
Translates to: LSSLGLRMTLKI*FPVHRVTGFSI
Trigger: AATACTAAAGCCTGTCACCCTGTGGACCGGAAAGCAGATCTTCAGTGTCATCCTCAGACCTAGTGATGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp ATTCTATGGTCAAGCACTCCATACAACAAGGGGGCGTaGTTGTTGTCTTGGCTGTACAGGTTCTTACTGACA +
Preference number: 6 (lower is better)
Translates to: ILWSSTPYNKGA*LLSWLYRFLLT
Trigger: TGTCAGTAAGAACCTGTACAGCCAAGACAACAACCACGCCCCCTTGTTGTATGGAGTGCTTGACCATAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp TTTTCATCTTTGCCAACCAGTATTGAAGCGATGATCTaGCAAGCCTTGGCTCGGTCAAAGAAGGTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: FSSLPTSIEAMI*QALARSKKVSL
Trigger: CAAGGACACCTTCTTTGACCGAGCCAAGGCTTGCCAGATCATCGCTTCAATACTGGTTGGCAAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 72 bp TTCTCTTCCTGGGACAGCATAATGTGGCAGCAGGTTTaGCAGATCATCTGTAAGATACCAATGACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: FSSWDSIMWQQV*QIICKIPMTAL
Trigger: CAGGGCTGTCATTGGTATCTTACAGATGATCTGCAAAACCTGCTGCCACATTATGCTGTCCCAGGAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp TTCACCTTCTCAGGAAAAGTTAGAATTTTGGCCACATaGACTGGCACGGCTACTTCATCAATCCGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: FTFSGKVRILAT*TGTATSSIRRL
Trigger: CAACCTCCGGATTGATGAAGTAGCCGTGCCAGTTCATGTGGCCAAAATTCTAACTTTTCCTGAGAAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp AGAAACTGCTGCTTCTCTTCCTGGGACAGCATAATGTaGCAGCAGGTTTTGCAGATCATCTGTAAGATACCA +
Preference number: 6 (lower is better)
Translates to: RNCCFSSWDSIM*QQVLQIICKIP
Trigger: TGGTATCTTACAGATGATCTGCAAAACCTGCTGCCACATTATGCTGTCCCAGGAAGAGAAGCAGCAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp CATCTGCATGTGTCTTTGTTGGATAAAATTGGCTCCTaGGTGAACATCTGGGCCATTTCGAACCAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: HLHVSLLDKIGS*VNIWAISNQFP
Trigger: AGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGACACATGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS TCA 72 bp TGCATGTGTCTTTGTTGGATAAAATTGGCTCCTGGGTaGACATCTGGGCCATTTCGAACCAGTTTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: CMCLCWIKLAPG*TSGPFRTSFLK
Trigger: TTTGAGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGACACATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp GGGAAGATGAAGGTTCATTTCATCCCCATCAAAGTCTaGATTGTAGGGGGTGCAGACACATTCATTGAATCT +
Preference number: 6 (lower is better)
Translates to: GKMKVHFIPIKV*IVGGADTFIES
Trigger: AGATTCAATGAATGTGTCTGCACCCCCTACAATGCAGACTTTGATGGGGATGAAATGAACCTTCATCTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CAA 90 bp TTTAGGAAAATGATCTCTGTCAGTTTCATTGTCAGGTCATCTTCATaGGTTCCAGACTTCAGATCACTCACGACGGACGGTCTGATACAC +
Preference number: 6 (lower is better)
Translates to: FRKMISVSFIVRSSS*VPDFRSLTTDGLIH
Trigger: GTGTATCAGACCGTCCGTCGTGAGTGATCTGAAGTCTGGAACCAATGAAGATGACCTGACAATGAAACTGACAGAGATCATTTTCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS GCA 72 bp TTTTCCCGATTTCCATACTTCAGGAACCTCTTCATCTaGATGTGTCTTTGTTGGATAAAATTGGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: FSRFPYFRNLFI*MCLCWIKLAPG
Trigger: CCCAGGAGCCAATTTTATCCAACAAAGACACATGCAGATGAAGAGGTTCCTGAAGTATGGAAATCGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2
CDS CCA 72 bp TCTTTGTTGGATAAAATTGGCTCCTGGGTGAACATCTaGGCCATTTCGAACCAGTTTCCTCAAAAAGTTGAT +
Preference number: 6 (lower is better)
Translates to: SLLDKIGSWVNI*AISNQFPQKVD
Trigger: ATCAACTTTTTGAGGAAACTGGTTCGAAATGGCCCAGATGTTCACCCAGGAGCCAATTTTATCCAACAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026322.9
ENSMUST00000223718.2