Pregenerated sensors for POLR2G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071662Ensembl transcript IDs: ENSMUST00000096261.5, ENSMUST00000235964.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACAGAATAAAGTCTCAGGGCACAGCTCAGCTGGAAGAAACAGCTaGGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTG | + |
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Preference number: 1 (lower is better) Translates to: AQNKVSGHSSAGRNS*GQGAFLASLTVARL Trigger: CAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCTGAGCTGTGCCCTGAGACTTTATTCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| 3UTR GCA 90 bp | GCACAGCTCAGCTGGAAGAAACAGCTGAGGACAAGGAGCCTTTCTTaGCTCCCTAACAGTGGCCAGATTGAACCTCCGGTAGGAAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: AQLSWKKQLRTRSLS*LPNSGQIEPPVGKL Trigger: TAACTTTCCTACCGGAGGTTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCTGAGCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| 3UTR TCA 72 bp | AAAGTCTCAGGGCACAGCTCAGCTGGAAGAAACAGCTaGGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: KVSGHSSAGRNS*GQGAFLASLTV Trigger: CACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCTGAGCTGTGCCCTGAGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| 3UTR GCA 72 bp | AGCTGGAAGAAACAGCTGAGGACAAGGAGCCTTTCTTaGCTCCCTAACAGTGGCCAGATTGAACCTCCGGTA | + |
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Preference number: 3 (lower is better) Translates to: SWKKQLRTRSLS*LPNSGQIEPPV Trigger: TACCGGAGGTTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCAGCTGGAAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACTCTGCTTCACCGTGTTaGGCAAGTTTGGACCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QLSWKKQLRTRSLSCLPNSASPC*ASLDRS Trigger: ACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGA...GTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCTGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR TCA 90 bp | AAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTCCAACCTTGTTGACCTaGGTGACCACAGCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: KKQLRTRSLSCLPNSGQIPTLLT*VTTAST Trigger: GGTGGATGCTGTGGTCACTCAGGTCAACAAGGTTGG...AATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR TCA 90 bp | AGCTGGAAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCATCTCATCGTCCTGCTaGATCACAATGTCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SWKKQLRTRSLSCLPNSGISSSC*ITMSSS Trigger: GGACGAGGACATTGTGATTCAGCAGGACGATGAGAT...GCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS-3UTR GCA 90 bp | ATGGTTAGAGCACAGAATAAAGTCTCAGGGCACAGCTCAGCTGGAAGAAACAGCAGCCATATTTCCCAGTaGAGGTCCCCTCCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: MVRAQNKVSGHSSAGRNSSHISQ*RSPPPR Trigger: CCGAGGTGGAGGGGACCTGCACTGGGAAATATGGCT...GCTGTTTCTTCCAGCTGAGCTGTGCCCTGAGACTTTATTCTGTGCTCTAACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR CCA 90 bp | AAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTGAAAAACCTCGGCCTGGCTaGATCACACCAGCACCAATA | + |
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Preference number: 4 (lower is better) Translates to: KQLRTRSLSCLPNSGQIEKPRPG*ITPAPI Trigger: TATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGTTT...TTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR TCA 90 bp | AGCTGGAAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCATCAAACTCCATCTCTaGAGGGATGGAATGTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SWKKQLRTRSLSCLPNSGIKLHL*RDGMSR Trigger: TCTCGACATTCCATCCCTTCAGAGATGGAGTTTGAT...GCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTTCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS-3UTR TCA 90 bp | AAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTATCTCATCGTCCTGCTaGATCACAATGTCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: KKQLRTRSLSCLPNSGQIISSSC*ITMSSS Trigger: GGACGAGGACATTGTGATTCAGCAGGACGATGAGAT...AATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS-3UTR CCA 90 bp | AAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTCGTGTTGAGCAAGTTTaGACCGAAGTATCGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KKQLRTRSLSCLPNSGQIRVEQV*TEVSWV Trigger: CACCCACGATACTTCGGTCCAAACTTGCTCAACACG...AATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR GCA 90 bp | AAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTGAATCGGTAAACAGCTTCTaGTTCACCGTGTTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KQLRTRSLSCLPNSGQIESVNSF*FTVLSK Trigger: CTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGA...TTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR CCA 90 bp | AACAAGGACAACATGTTTATGGTTAGAGCACAGAATAAAGTCTCAGGGCACAGCAACAAAACCTCGGCCTaGCTGGATCACACCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: NKDNMFMVRAQNKVSGHSNKTSA*LDHTST Trigger: GGTGCTGGTGTGATCCAGCCAGGCCGAGGTTTTGTT...GCTGTGCCCTGAGACTTTATTCTGTGCTCTAACCATAAACATGTTGTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR TCA 90 bp | AAGAAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTTATTGTCGATGGTGGTaGCAGCAATTACAAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KKQLRTRSLSCLPNSGQIYCRWW*QQLQSH Trigger: ATGGCTTTGTAATTGCTGTCACCACCATCGACAATA...AATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR TCA 90 bp | ATGGTTAGAGCACAGAATAAAGTCTCAGGGCACAGCTCAGCTGGAAGAAACAGCATCAAACTCCATCTCTaGAGGGATGGAATGTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: MVRAQNKVSGHSSAGRNSIKLHL*RDGMSR Trigger: TCTCGACATTCCATCCCTTCAGAGATGGAGTTTGAT...GCTGTTTCTTCCAGCTGAGCTGTGCCCTGAGACTTTATTCTGTGCTCTAACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTAGAGCACAGAATAAAGTCTCAGGGCACAGCTCAGCTGGAAGAAACAGCAGCTTTGTATTTCACTaGATAAAGAACAAAACCTCG | + |
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Preference number: 4 (lower is better) Translates to: MVRAQNKVSGHSSAGRNSSFVFH*IKNKTS Trigger: CGAGGTTTTGTTCTTTATCCAGTGAAATACAAAGCT...GCTGTTTCTTCCAGCTGAGCTGTGCCCTGAGACTTTATTCTGTGCTCTAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR CCA 90 bp | GGTAGGAAAGTTAAGTTGGTGCTGAACTCAAGTCGGAAAGCCACACTTCCTAAACCATCAGAGAGCCAATaGCAAAAATGTCATTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GRKVKLVLNSSRKATLPKPSESQ*QKCHSC Trigger: ACAAGAATGACATTTTTGCCATTGGCTCTCTGATGG...TTTAGGAAGTGTGGCTTTCCGACTTGAGTTCAGCACCAACTTAACTTTCCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS CCA 90 bp | CTCCACCTCGGTAAACAGCTTCTGCTTCACCGTGTTGAGCAAGTTTaGACCGAAGTATCGTGGGTGCAGGAGGATCTCGTGCTCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LHLGKQLLLHRVEQV*TEVSWVQEDLVLQG Trigger: TCCCTGGAGCACGAGATCCTCCTGCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS GCA 90 bp | CCATATTTCCCAGTGCAGGTCCCCTCCACCTCGGTAAACAGCTTCTaGTTCACCGTGTTGAGCAAGTTTGGACCGAAGTATCGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PYFPVQVPSTSVNSF*FTVLSKFGPKYRGC Trigger: GCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAGGGGACCTGCACTGGGAAATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTGAACCTACACCAGCACCAATATaGTCGATGGTGGTGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: QLRTRSLSCLPNSGQIEPTPAPI*SMVVTA Trigger: TGCTGTCACCACCATCGACAATATTGGTGCTGGTGT...AGGTTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS-3UTR CAA 90 bp | AAACAGCTGAGGACAAGGAGCCTTTCTTGCCTCCCTAACAGTGGCCAGATTGAATTCTGCTTCACCGTGTaGAGCAAGTTTGGACCGAAG | + |
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Preference number: 5 (lower is better) Translates to: KQLRTRSLSCLPNSGQIEFCFTV*SKFGPK Trigger: CTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAA...TTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAGCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS GCA 90 bp | CCATCAGAGAGCCAATGGCAAAAATGTCATTCTTGTCTACACGCGTaGCTACAATCTTCAAGCGTATCTCATCGTCCTGCTGAATCACAA | + |
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Preference number: 5 (lower is better) Translates to: PSESQWQKCHSCLHA*LQSSSVSHRPAESQ Trigger: TTGTGATTCAGCAGGACGATGAGATACGCTTGAAGATTGTAGGCACGCGTGTAGACAAGAATGACATTTTTGCCATTGGCTCTCTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS CCA 90 bp | AACAATAGCTTTGTATTTCACTGGATAAAGAACAAAACCTCGGCCTaGCTGGATCACACCAGCACCAATATTGTCGATGGTGGTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: NNSFVFHWIKNKTSA*LDHTSTNIVDGGDS Trigger: GCTGTCACCACCATCGACAATATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGTTTTGTTCTTTATCCAGTGAAATACAAAGCTATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS CAA 90 bp | GTGCAGGTCCCCTCCACCTCGGTAAACAGCTTCTGCTTCACCGTGTaGAGCAAGTTTGGACCGAAGTATCGTGGGTGCAGGAGGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: VQVPSTSVNSFCFTV*SKFGPKYRGCRRIS Trigger: CGAGATCCTCCTGCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAGGGGACCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS CAA 72 bp | CCCTCCACCTCGGTAAACAGCTTCTGCTTCACCGTGTaGAGCAAGTTTGGACCGAAGTATCGTGGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSTSVNSFCFTV*SKFGPKYRGCR Trigger: CCTGCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS GCA 72 bp | CCAGTGCAGGTCCCCTCCACCTCGGTAAACAGCTTCTaGTTCACCGTGTTGAGCAAGTTTGGACCGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: PVQVPSTSVNSF*FTVLSKFGPKY Trigger: ATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAGGGGACCTGCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS CCA 72 bp | GGTAAACAGCTTCTGCTTCACCGTGTTGAGCAAGTTTaGACCGAAGTATCGTGGGTGCAGGAGGATCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: GKQLLLHRVEQV*TEVSWVQEDLV Trigger: CACGAGATCCTCCTGCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS CCA 72 bp | TCACGAGCCCCAAGTAGTCGTCCATCAGAGAGCCAATaGCAAAAATGTCATTCTTGTCTACACGCGTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: SRAPSSRPSESQ*QKCHSCLHACL Trigger: TAGGCACGCGTGTAGACAAGAATGACATTTTTGCCATTGGCTCTCTGATGGACGACTACTTGGGGCTCGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS CAA 72 bp | AAACCTCGGCCTGGCTGGATCACACCAGCACCAATATaGTCGATGGTGGTGACAGCAATTACAAAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: KPRPGWITPAPI*SMVVTAITKPY Trigger: ATATGGCTTTGTAATTGCTGTCACCACCATCGACAATATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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| CDS GCA 72 bp | AGCCAATGGCAAAAATGTCATTCTTGTCTACACGCGTaGCTACAATCTTCAAGCGTATCTCATCGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQWQKCHSCLHA*LQSSSVSHRPA Trigger: AGCAGGACGATGAGATACGCTTGAAGATTGTAGGCACGCGTGTAGACAAGAATGACATTTTTGCCATTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS CAA 72 bp | TCGTCCATCAGAGAGCCAATGGCAAAAATGTCATTCTaGTCTACACGCGTGCCTACAATCTTCAAGCGTATC | + |
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Preference number: 6 (lower is better) Translates to: SSIREPMAKMSF*STRVPTIFKRI Trigger: GATACGCTTGAAGATTGTAGGCACGCGTGTAGACAAGAATGACATTTTTGCCATTGGCTCTCTGATGGACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096261.5 ENSMUST00000235964.2 |
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| CDS CCA 72 bp | TTTGTATTTCACTGGATAAAGAACAAAACCTCGGCCTaGCTGGATCACACCAGCACCAATATTGTCGATGGT | + |
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Preference number: 6 (lower is better) Translates to: FVFHWIKNKTSA*LDHTSTNIVDG Trigger: ACCATCGACAATATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGTTTTGTTCTTTATCCAGTGAAATACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096261.5 |
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