Pregenerated sensors for POLR2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029250Ensembl transcript IDs: ENSMUST00000031167.6
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTCTCCACTGGCGTGCTaGGCTTCGGCCTGTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELSPLAC*ASACRS Trigger: TGACCTACAGGCCGAAGCTCAGCACGCCAGTGGAGA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAGATCACGATCCAGCATaGTTCCTGCCACAGATCCGG | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLADHDPA*FLPQIR Trigger: CCGGATCTGTGGCAGGAAGCATGCTGGATCGTGATC...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTGTAGCGCCTGTTGGTaGTCTCCAGCTCATCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLCSACW*SPAHPR Trigger: ACGAGGATGAGCTGGAGAGCACCAACAGGCGCTACA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCACCATCACGAGATCTaGCCTCCATGGGCTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLHHHEI*PPWAVC Trigger: ACAGACAGCCCATGGAGGGCAGATCTCGTGATGGTG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCTTCAACTTCTCCACTaGCGTGCTGAGCTTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLLQLLH*RAELRP Trigger: AGGCCGAAGCTCAGCACGCCAGTGGAGAAGTTGAAG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATGCCTCATTCCCTaGCATGTCTCACGTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLACLIP*HVSRVG Trigger: GCCTACACGTGAGACATGCCAGGGAATGAGGCATGC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAAGAGTGACCATGACCTaGTCCACGATGCCCGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLARVTMT*STMPVS Trigger: TGAGACGGGCATCGTGGACCAGGTCATGGTCACTCT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCACGGGAGGGGATGGCGTaGGGGTTTATGATGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAREGMA*GFMMMS Trigger: TGACATCATCATAAACCCCCACGCCATCCCCTCCCG...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATGGCCACAATTGAGTTaGTTCCTGCTGGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAWPQLS*FLLAAL Trigger: GAGAGCTGCCAGCAGGAATCAACTCAATTGTGGCCA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTACAGCATGGCCCTCTaGAGTTTCAGCAGGACACAC | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLYSMAL*SFSRTH Trigger: GTGTGTCCTGCTGAAACTCCAGAGGGCCATGCTGTA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGACAAGCCCTACAGCATaGCCCTCTGGAGTTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLTSPTA*PSGVSA Trigger: TGCTGAAACTCCAGAGGGCCATGCTGTAGGGCTTGT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTCACTGACACCAACGTaGGGGAGCATTTCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLSLTPT*GSISFC Trigger: ACAGAAAGAAATGCTCCCTCACGTTGGTGTCAGTGA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCCTCGATCCACAGCTaGACGATTCATGATAACAGA | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLASIHS*TIHDNR Trigger: TCTGTTATCATGAATCGTTCAGCTGTGGATCGAGGC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTATCCAGCATGCTTCCTaGCACAGATCCGGAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELIQHAS*HRSGVI Trigger: GATCACTCCGGATCTGTGGCAGGAAGCATGCTGGAT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATATTGCGGCATCCCCTaGACTCATATGTATGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAYCGIP*THMYES Trigger: GGACTCATACATATGAGTGCAGGGGATGCCGCAATA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTTCATTTGGCATCATTaGCGAAGGGGCACCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLFIWHH*RRGTIS Trigger: AGAGATGGTGCCCCTTCGCCAATGATGCCAAATGAA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCACCCCAGTTCCCAGTaGCTAAAGAGTATTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLHPSSQ*LKSILA Trigger: GGCTAAAATACTCTTTAGCCACTGGGAACTGGGGTG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAGGCGGTTCAATACCTaGGATACTCCAGCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELRRFNT*DTPALA Trigger: AGCCAGAGCTGGAGTATCCCAGGTATTGAACCGCCT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTACTCTACTACCCCACTaGCTACCAGATCCTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELTLLPH*LPDPAN Trigger: GTTGGCAGGATCTGGTAGCCAGTGGGGTAGTAGAGT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCACAATTTCACCCTTGTTaGCAGAGACCTTCCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAQFHPC*QRPSLG Trigger: TCCAAGGGAAGGTCTCTGCCAACAAGGGTGAAATTG...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCCCCTCTTGAACCGATaGAGTTTAAGGCAACATTCT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLPLLNR*SLRQHS Trigger: AGAATGTTGCCTTAAACTTCATCGGTTCAAGAGGGG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATTTAGACGACGCAGGTaGGAAAGAGTAGATGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAFRRRR*ERVDAN Trigger: GTTTGCATCTACTCTTTCTCACCTGCGTCGTCTAAA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGACTCCAAGAATCATTaGTGGGTGAATCTCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLDSKNH*WVNLTV Trigger: CACTGTGAGATTCACCCATCAATGATTCTTGGAGTC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGCACCGTGGGCAATTTaGCAGTCTCGTTCCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELAPWAI*QSRSIS Trigger: AGAAATGGAACGAGACTGTCAAATTGCCCACGGTGC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAATAGCACTCTTCTTTaGACCCTGTCCTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNSTLL*TLSSSG Trigger: GCCAGAGGAGGACAGGGTGCAAAGAAGAGTGCTATT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCGTCTAGTTCTCTTCTaGCTAGGGCTGCTAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELRLVLF*LGLLEA Trigger: TGCTTCTAGCAGCCCTAGGCAGAAGAGAACTAGACG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAGTGAGAAAGAGTAGATaGAAACGTCAGGCGGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAVRKSR*KRQAVQ Trigger: TTGAACCGCCTGACGTTTGCATCTACTCTTTCTCAC...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGTTGCCACGATGCGCTaGCCAATAGCACTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELVATMR*PIALFF Trigger: AAAGAAGAGTGCTATTGGCCAGCGCATCGTGGCAAC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTGTTCGGGGTCTTTATaGATTCCAACCCAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELCSGSL*IPTQQP Trigger: TGGCTGCTGGGTTGGAATCCATAAAGACCCCGAACA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCACTCCTGCAAATCATCTaGAGTCATTGCAAGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLALLQII*SHCKHH Trigger: GTGATGCTTGCAATGACTCCAGATGATTTGCAGGAG...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAACGTTTTCTGGTGCTaGGTCTGCAGCTGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNVFWC*VCSCSS Trigger: TGAAGAACAGCTGCAGACTCAGCACCAGAAAACGTT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCATTCTGCTCTTGGATaGCAAACGCTTCATCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELHSALG*QTLHRE Trigger: CTCTCGATGAAGCGTTTGTCATCCAAGAGCAGAATG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGGGTTGAGATCCAACTaGAATATAAGCCATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELGLRSN*NISHQG Trigger: GCCCTGATGGCTTATATTTCAGTTGGATCTCAACCC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGGTAGAAAACAGACCTaGAAAAGCCTCGATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELGRKQT*KSLDPQ Trigger: CTGTGGATCGAGGCTTTTTCAGGTCTGTTTTCTACC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATCCTCTTGTCTATACTaGATACCACAAGTTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLASSCLY*IPQVPF Trigger: GAAGGGAACTTGTGGTATTCAGTATAGACAAGAGGA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTGTCTGTTAAGAATCTaGATGGGTCCCCTAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELCLLRI*MGPLAR Trigger: TCGTGCTAGGGGACCCATTCAGATTCTTAACAGACA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTACAATGATGTCCATCTaGCGCCGTAACTTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELTMMSI*RRNFLS Trigger: GCTAAGGAAGTTACGGCGGCAGATGGACATCATTGT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTATCATCTGGAGTCATTaGAAGCATCACGGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELIIWSH*KHHGLL Trigger: GAGGAGACCGTGATGCTTGCAATGACTCCAGATGAT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAATCCAGCTGTTGTCTaGCCAAGCCTTTCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNPAVV*PSLSHQ Trigger: TTGATGAGAAAGGCTTGGTCAGACAACAGCTGGATT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGTTGCCATTTTCTCTTaGGCTATCAGAACCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLVAIFS*AIRTFS Trigger: AGAAAAGGTTCTGATAGCTCAAGAGAAAATGGCAAC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCCCCTAGCACGAGAATaGATTTTGTCATCCACCATA | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELPLARE*ILSSTI Trigger: TATGGTGGATGACAAAATTCATTCTCGTGCTAGGGG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAAATCTGGGTTTTATTaGGGCATCCCCTGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELKSGFY*GIPCTH Trigger: ATGAGTGCAGGGGATGCCGCAATAAAACCCAGATTT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCGCTTCATCGAGAGATaGTTTAACCATTTCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLRFIER*FNHFHH Trigger: ATGATGGAAATGGTTAAACCATCTCTCGATGAAGCG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTATTATGCAACTGTCTaGGCTTCGCTAGCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELYYATV*ASLACH Trigger: ATGGCAAGCTAGCGAAGCCCAGACAGTTGCATAATA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAAATTTATATCCTTCCTaGTTGAGAGTGACCATGACC | + |
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Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLANLYPS*LRVTMT Trigger: GGTCATGGTCACTCTCAACCAGGAAGGATATAAATT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAACACTCATCATTCGTaGTGCGATGCTCATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNTHHS*CDAHGH Trigger: ATGTCCATGAGCATCGCACCACGAATGATGAGTGTT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTTGGAATTTTCCCTATaGACGTTTTCTGGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELLEFSL*TFSGAE Trigger: CTCAGCACCAGAAAACGTTCATAGGGAAAATTCCAA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAATTTGTCTCCAATCTaGGGAATTCTAACAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNLSPI*GILTER Trigger: GCGCTCTGTTAGAATTCCGCAGATTGGAGACAAATT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAACTTGGAATCCTTTTTaGCAAACACATAGACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLATWNPF*QTHRLC Trigger: ACACAGTCTATGTGTTTGCCAAAAAGGATTCCAAGT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCACTGTATAGGCATACTTaGAATCCTTTTTGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLALYRHT*NPFWQT Trigger: TGTTTGCCAAAAAGGATTCCAAGTATGCCTATACAG...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTAGGGGACTGGTTATaGTCAGGAAAAGGAATAATA | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELLGDWL*SGKGII Trigger: TATTATTCCTTTTCCTGATCATAACCAGTCCCCTAG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR TCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTCTTGTTCTTTGTATaGTCGGTAGAAAACAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELLLFFV*SVENRP Trigger: AGGTCTGTTTTCTACCGATCATACAAAGAACAAGAG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAATAGACTGTGTTTGTTaGCATTTTCTCTTGAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NHRNKIVIVTVSDHELLAIDCVC*HFLLSY Trigger: ATAGCTCAAGAGAAAATGGCAACAAACACAGTCTAT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGATGATAGGAACTTCTTaGTTGATGTATGGTAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNHRNKIVIVTVSDHELLMIGTS*LMYGNV Trigger: AACGTTACCATACATCAAGCAAGAAGTTCCTATCAT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTTTAAGGCAACATTCTaGTCTTGGATGACAAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELFKATF*SWMTNA Trigger: AGCGTTTGTCATCCAAGAGCAGAATGTTGCCTTAAA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTAACAAAAATCTTGGTTaGATCAGCAATAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELNKNLG*ISNSCR Trigger: CCTGCAGCTATTGCTGATGCAACCAAGATTTTTGTT...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTCTACAAATACGGCCTaGATCTGTATAGATCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELSTNTA*ICIDPN Trigger: ATTCGGATCTATACAGATGCAGGCCGTATTTGTAGA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTTCAAAAGCAGCTTCTaGTTTTCCACAATCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELFKSSF*FSTIRR Trigger: CCTTCTGATTGTGGAAAAGCAGAAGCTGCTTTTGAA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTTCTCTCTCTTTCAACTaGTCAATGTGTCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELSLSFN*SMCLFF Trigger: GAAGAAGAGACACATTGACCAGTTGAAAGAGAGAGA...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGACAGCATCATTAAATaGAGTAGCGTCACCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELDSIIK*SSVTNF Trigger: GAAATTGGTGACGCTACTCCATTTAATGATGCTGTC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCATTTCCATCATCTCTaGATCCTCGAAGTCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDNHRNKIVIVTVSDHELHFHHL*ILEVIN Trigger: ATTTATGACTTCGAGGATCCAGAGATGATGGAAATG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 90 bp | TCACCCTTGTTGGCAGAGACCTTCCCTTGGAGACATTCGATCAAGTaGCCAATTGTCATCCGGGAGGGGATGGCGTGGGGGTTTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPLLAETFPWRHSIK*PIVIREGMAWGFMM Trigger: CATCATAAACCCCCACGCCATCCCCTCCCGGATGACAATTGGTCACTTGATCGAATGTCTCCAAGGGAAGGTCTCTGCCAACAAGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 90 bp | CCCTCTGGAGTTTCAGCAGGACACACCATTCCCCACAAGGTATTATaGAACTGTCTGGGCTTCGCTAGCTTGCCATCTCTGCCAATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSGVSAGHTIPHKVL*NCLGFASLPSLPIG Trigger: TCCTATTGGCAGAGATGGCAAGCTAGCGAAGCCCAGACAGTTGCATAATACCTTGTGGGGAATGGTGTGTCCTGCTGAAACTCCAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 90 bp | ATAGGAACTTCTTGCTTGATGTATGGTAACGTTGCCACGATGCGCTaGCCAATAGCACTCTTCTTTGCACCCTGTCCTCCTCTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGTSCLMYGNVATMR*PIALFFAPCPPLAS Trigger: GCTGGCCAGAGGAGGACAGGGTGCAAAGAAGAGTGCTATTGGCCAGCGCATCGTGGCAACGTTACCATACATCAAGCAAGAAGTTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 90 bp | TTCAGTAAATATCTTGGCGGCTCTTCAACTTCTCCACTGGCGTGCTaGGCTTCGGCCTGTAGGTCAATCGGTGGTGCATCTTCCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FSKYLGGSSTSPLAC*ASACRSIGGASSTI Trigger: AATTGTGGAAGATGCACCACCGATTGACCTACAGGCCGAAGCTCAGCACGCCAGTGGAGAAGTTGAAGAGCCGCCAAGATATTTACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 90 bp | GCTAGCTTGCCATCTCTGCCAATAGGAGAGTTTAGACGACGCAGGTaGGAAAGAGTAGATGCAAACGTCAGGCGGTTCAATACCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASLPSLPIGEFRRRR*ERVDANVRRFNTWD Trigger: ATCCCAGGTATTGAACCGCCTGACGTTTGCATCTACTCTTTCTCACCTGCGTCGTCTAAACTCTCCTATTGGCAGAGATGGCAAGCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 90 bp | GCTAACCCATATAGTACTGGTGGGTCGGGAAGAATTCTCCAGGCATaGGCGACATTCTCCTGTATAGGCATACTTGGAATCCTTTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ANPYSTGGSGRILQA*ATFSCIGILGILFG Trigger: GCCAAAAAGGATTCCAAGTATGCCTATACAGGAGAATGTCGCTCATGCCTGGAGAATTCTTCCCGACCCACCAGTACTATATGGGTTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 90 bp | GACACAAAGCCTAGTGCTCTGAACACAATGATGATAGGAACTTCTTaGTTGATGTATGGTAACGTTGCCACGATGCGCTGGCCAATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTKPSALNTMMIGTS*LMYGNVATMRWPIA Trigger: TGCTATTGGCCAGCGCATCGTGGCAACGTTACCATACATCAAGCAAGAAGTTCCTATCATCATTGTGTTCAGAGCACTAGGCTTTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 90 bp | CAGCTTCTGCTTTTCCACAATCAGAAGGGGTCTACAAATACGGCCTaGATCTGTATAGATCCGAATCTCCCGCTCTCGAATATCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLFHNQKGSTNTA*ICIDPNLPLSNISD Trigger: ATCAGAGATATTCGAGAGCGGGAGATTCGGATCTATACAGATGCAGGCCGTATTTGTAGACCCCTTCTGATTGTGGAAAAGCAGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 90 bp | CCAGGCTTTGCCCCTCTTGAACCGATGAAGTTTAAGGCAACATTCTaGTCTTGGATGACAAACGCTTCATCGAGAGATGGTTTAACCATT | + |
|
Preference number: 5 (lower is better) Translates to: PGFAPLEPMKFKATF*SWMTNASSRDGLTI Trigger: AATGGTTAAACCATCTCTCGATGAAGCGTTTGTCATCCAAGAGCAGAATGTTGCCTTAAACTTCATCGGTTCAAGAGGGGCAAAGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 90 bp | CGAATATCTCTGATCATAGAAACTTCGGATACAATGATGTCCATCTaGCGCCGTAACTTCCTTAGCGTGTTCATGAGTTGTTCGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RISLIIETSDTMMSI*RRNFLSVFMSCSGS Trigger: AGACCCCGAACAACTCATGAACACGCTAAGGAAGTTACGGCGGCAGATGGACATCATTGTATCCGAAGTTTCTATGATCAGAGATATTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 90 bp | TCACGGTCTCCTCTTCCAGGGTATCAATATACTCTACTACCCCACTaGCTACCAGATCCTGCCAACTGTAGTTGTTATATTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSPLPGYQYTLLPH*LPDPANCSCYILSL Trigger: AAGAGAGAGAATATAACAACTACAGTTGGCAGGATCTGGTAGCCAGTGGGGTAGTAGAGTATATTGATACCCTGGAAGAGGAGACCGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 90 bp | GGTGTAGGTAGAACAATAAGCTACTTCCTTCTCCTGCAAATCATCTaGAGTCATTGCAAGCATCACGGTCTCCTCTTCCAGGGTATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GVGRTISYFLLLQII*SHCKHHGLLFQGIN Trigger: ATTGATACCCTGGAAGAGGAGACCGTGATGCTTGCAATGACTCCAGATGATTTGCAGGAGAAGGAAGTAGCTTATTGTTCTACCTACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 90 bp | ATTTTACAAAATTTATATCCTTCCTGGTTGAGAGTGACCATGACCTaGTCCACGATGCCCGTCTCACTAGTTCTGAGGAAAGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILQNLYPSWLRVTMT*STMPVSLVLRKVLQ Trigger: CTGCAGCACTTTCCTCAGAACTAGTGAGACGGGCATCGTGGACCAGGTCATGGTCACTCTCAACCAGGAAGGATATAAATTTTGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGCGATCAAGTGACCAATaGTCATCCGGGAGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLRSSDQ*SSGRGW Trigger: CCATCCCCTCCCGGATGACAATTGGTCACTTGATCG...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAACTCCCATAGCCTGCTaGCCCATAGCAGACTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLATPIAC*PIADWY Trigger: ATACCAGTCTGCTATGGGCAAGCAGGCTATGGGAGT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTTAACCTGGCTTCATTaGGCATCATTGGCGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLLTWLH*ASLAKG Trigger: CCCCTTCGCCAATGATGCCAAATGAAGCCAGGTTAA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGGCTTCGCTAGCTaGCCATCTCTGCCAATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NDNHRNKIVIVTVSDHELLGFAS*PSLPIG Trigger: TCCTATTGGCAGAGATGGCAAGCTAGCGAAGCCCAG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGATGGCCACAATTGAGTaGATTCCTGCTGGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLMATIE*IPAGSS Trigger: AGAGCTGCCAGCAGGAATCAACTCAATTGTGGCCAT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTCACCAATTTCACCCTaGTTGGCAGAGACCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLSPISP*LAETFP Trigger: AGGGAAGGTCTCTGCCAACAAGGGTGAAATTGGTGA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATGCACCGTGGGCAATTaGACAGTCTCGTTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLACTVGN*TVSFHF Trigger: GAAATGGAACGAGACTGTCAAATTGCCCACGGTGCA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 90 bp | AAGGAAATCTGGGTTTTATTGCGGCATCCCCTGCACTCATATGTATaGGTCCTCGTGTTAGCAATTGCCATTATTCCACAAAGATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KEIWVLLRHPLHSYV*VLVLAIAIIPQRLQ Trigger: CTGTAATCTTTGTGGAATAATGGCAATTGCTAACACGAGGACTCATACATATGAGTGCAGGGGATGCCGCAATAAAACCCAGATTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGAAAGGAATCCAGCTGTaGTCTGACCAAGCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLKGIQL*SDQAFL Trigger: GAGAAAGGCTTGGTCAGACAACAGCTGGATTCCTTT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAAATCATCTGGAGTCATaGCAAGCATCACGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLANHLES*QASRSP Trigger: AGGAGACCGTGATGCTTGCAATGACTCCAGATGATT...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCCAATTTCACCCTTGTaGGCAGAGACCTTCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NDNHRNKIVIVTVSDHELPISPL*AETFPW Trigger: CCAAGGGAAGGTCTCTGCCAACAAGGGTGAAATTGG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 90 bp | AAGAATTCTCCAGGCATGAGCGACATTCTCCTGTATAGGCATACTTaGAATCCTTTTTGGCAAACACATAGACTGTGTTTGTTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KNSPGMSDILLYRHT*NPFWQTHRLCLLPF Trigger: AAATGGCAACAAACACAGTCTATGTGTTTGCCAAAAAGGATTCCAAGTATGCCTATACAGGAGAATGTCGCTCATGCCTGGAGAATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGGTAAGGTGACTGTCTaGCCGATAATAACGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLGKVTV*PIITSS Trigger: AGATGACGTTATTATCGGCAAGACAGTCACCTTACC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGTGTCGGCTAGCAAATTaGTCTCCAATCTGCGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLCRLAN*SPICGI Trigger: AATTCCGCAGATTGGAGACAAATTTGCTAGCCGACA...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
||
| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGAACGGCATGTCCTCTaGTCTATACTGAATACCACA | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLERHVL*SILNTT Trigger: TGTGGTATTCAGTATAGACAAGAGGACATGCCGTTC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
||
| CDS-3UTR CAA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGAAATCTGGGTTTTATaGCGGCATCCCCTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NDNHRNKIVIVTVSDHELEIWVL*RHPLHS Trigger: TGAGTGCAGGGGATGCCGCAATAAAACCCAGATTTC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
||
| CDS TCA 90 bp | ATGATCAGGAAAAGGAATAATAGATGCACAGACTCCAAGAATCATTaGTGGGTGAATCTCACAGTGGGTGTAGGTAGAACAATAAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: MIRKRNNRCTDSKNH*WVNLTVGVGRTISY Trigger: GTAGCTTATTGTTCTACCTACACCCACTGTGAGATTCACCCATCAATGATTCTTGGAGTCTGTGCATCTATTATTCCTTTTCCTGATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGATAGGAACTTCTTGCTaGATGTATGGTAACGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLIGTSC*MYGNVA Trigger: GGCAACGTTACCATACATCAAGCAAGAAGTTCCTAT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGAGACTCCAAGAATCATaGATGGGTGAATCTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLRLQES*MGESHS Trigger: ACTGTGAGATTCACCCATCAATGATTCTTGGAGTCT...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCAGATAACAGAGTCTTCTaGATTATAGCCCGTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLADNRVF*IIARVG Trigger: TCCTACACGGGCTATAATCAAGAAGACTCTGTTATC...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCATGTTGCCATTTTCTCTaGAGCTATCAGAACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLACCHFL*SYQNLF Trigger: GAAAAGGTTCTGATAGCTCAAGAGAAAATGGCAACA...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGCACATAGACTGTGTTTGTaGCCATTTTCTCTTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NHRNKIVIVTVSDHELLAHRLCL*PFSLEL Trigger: TAGCTCAAGAGAAAATGGCAACAAACACAGTCTATG...TGCCAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | GACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCTGGAAATCTTCTGCACATaGACAGCATCATTAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: DNHRNKIVIVTVSDHELLEIFCT*TASLNG Trigger: TCCATTTAATGATGCTGTCAATGTGCAGAAGATTTC...CAGAAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTGATATGATCCTTGTCTaGATTGCCAGCTCTAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NDNHRNKIVIVTVSDHELDMILV*IASSKL Trigger: TAACTTAGAGCTGGCAATCAAGACAAGGATCATATC...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS-3UTR CAA 90 bp | AATGACAATCACAGAAACAAGATAGTGATAGTCACAGTATCTGACCATGAACTTCCATTAACAAAAATCTaGGTTGCATCAGCAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NDNHRNKIVIVTVSDHELPLTKI*VASAIA Trigger: AGCTATTGCTGATGCAACCAAGATTTTTGTTAATGG...AAGTTCATGGTCAGATACTGTGACTATCACTATCTTGTTTCTGTGATTGTCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 90 bp | TTGGTGCTCTCCAGCTCATCCTCGTTCTCGGGTAAGGTGACTGTCTaGCCGATAATAACGTCATCTCCGGAGACTCGGACCCCCGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSSSSSFSGKVTV*PIITSSPETRTPGA Trigger: AGCTCCGGGGGTCCGAGTCTCCGGAGATGACGTTATTATCGGCAAGACAGTCACCTTACCCGAGAACGAGGATGAGCTGGAGAGCACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TTGGCAGAGACCTTCCCTTGGAGACATTCGATCAAGTaGCCAATTGTCATCCGGGAGGGGATGGCGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAETFPWRHSIK*PIVIREGMAWG Trigger: CCCCCACGCCATCCCCTCCCGGATGACAATTGGTCACTTGATCGAATGTCTCCAAGGGAAGGTCTCTGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TATCTTGGCGGCTCTTCAACTTCTCCACTGGCGTGCTaGGCTTCGGCCTGTAGGTCAATCGGTGGTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: YLGGSSTSPLAC*ASACRSIGGAS Trigger: AGATGCACCACCGATTGACCTACAGGCCGAAGCTCAGCACGCCAGTGGAGAAGTTGAAGAGCCGCCAAGATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 72 bp | ATCATTCGTGGTGCGATGCTCATGGACATGAGCTCCTaGAACAACAGCTTGCACGCGTACGGCATTCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IIRGAMLMDMSS*NNSLHAYGIRT Trigger: GGTGCGAATGCCGTACGCGTGCAAGCTGTTGTTCCAGGAGCTCATGTCCATGAGCATCGCACCACGAATGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | GCGATGCTCATGGACATGAGCTCCTGGAACAACAGCTaGCACGCGTACGGCATTCGCACCAAGGAAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AMLMDMSSWNNS*HAYGIRTKEIW Trigger: CCAGATTTCCTTGGTGCGAATGCCGTACGCGTGCAAGCTGTTGTTCCAGGAGCTCATGTCCATGAGCATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | TCCAGCTCATCCTCGTTCTCGGGTAAGGTGACTGTCTaGCCGATAATAACGTCATCTCCGGAGACTCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSFSGKVTV*PIITSSPETRT Trigger: GGTCCGAGTCTCCGGAGATGACGTTATTATCGGCAAGACAGTCACCTTACCCGAGAACGAGGATGAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | AAACACTCATCATTCGTGGTGCGATGCTCATGGACATaGGCTCCTGGAACAACAGCTTGCACGCGTACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KHSSFVVRCSWT*APGTTACTRTA Trigger: TGCCGTACGCGTGCAAGCTGTTGTTCCAGGAGCTCATGTCCATGAGCATCGCACCACGAATGATGAGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 90 bp | ATTCGTGGTGCGATGCTCATGGACATGAGCTCCTGGAACAACAGCTaGCACGCGTACGGCATTCGCACCAAGGAAATCTGGGTTTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: IRGAMLMDMSSWNNS*HAYGIRTKEIWVLL Trigger: CAATAAAACCCAGATTTCCTTGGTGCGAATGCCGTACGCGTGCAAGCTGTTGTTCCAGGAGCTCATGTCCATGAGCATCGCACCACGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TGTCCATCTGCCGCCGTAACTTCCTTAGCGTGTTCATaGGTTGTTCGGGGTCTTTATGGATTCCAACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPSAAVTSLACS*VVRGLYGFQPS Trigger: GCTGGGTTGGAATCCATAAAGACCCCGAACAACTCATGAACACGCTAAGGAAGTTACGGCGGCAGATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | GTTTCAGCAGGACACACCATTCCCCACAAGGTATTATaGAACTGTCTGGGCTTCGCTAGCTTGCCATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSAGHTIPHKVL*NCLGFASLPSL Trigger: CAGAGATGGCAAGCTAGCGAAGCCCAGACAGTTGCATAATACCTTGTGGGGAATGGTGTGTCCTGCTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 72 bp | TCTTGCTTGATGTATGGTAACGTTGCCACGATGCGCTaGCCAATAGCACTCTTCTTTGCACCCTGTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCLMYGNVATMR*PIALFFAPCPP Trigger: AGGAGGACAGGGTGCAAAGAAGAGTGCTATTGGCCAGCGCATCGTGGCAACGTTACCATACATCAAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TCACGATCCAGCATGCTTCCTGCCACAGATCCGGAGTaGTCTCATCGTCGTCTTCATCATATTGCATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSMLPATDPE*SHRRLHHIACP Trigger: AGGACATGCAATATGATGAAGACGACGATGAGATCACTCCGGATCTGTGGCAGGAAGCATGCTGGATCGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | CACAAGGTATTATGCAACTGTCTGGGCTTCGCTAGCTaGCCATCTCTGCCAATAGGAGAGTTTAGACGACGC | + |
|
Preference number: 6 (lower is better) Translates to: HKVLCNCLGFAS*PSLPIGEFRRR Trigger: GCGTCGTCTAAACTCTCCTATTGGCAGAGATGGCAAGCTAGCGAAGCCCAGACAGTTGCATAATACCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | CCATCTCTGCCAATAGGAGAGTTTAGACGACGCAGGTaGGAAAGAGTAGATGCAAACGTCAGGCGGTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PSLPIGEFRRRR*ERVDANVRRFN Trigger: ATTGAACCGCCTGACGTTTGCATCTACTCTTTCTCACCTGCGTCGTCTAAACTCTCCTATTGGCAGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 90 bp | GATGATGTCAGGAGTTATGCCTTCGCAAGTGAACGGCATGTCCTCTaGTCTATACTGAATACCACAAGTTCCCTTCTGACCATGTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DDVRSYAFASERHVL*SILNTTSSLLTMSA Trigger: AGCCGACATGGTCAGAAGGGAACTTGTGGTATTCAGTATAGACAAGAGGACATGCCGTTCACTTGCGAAGGCATAACTCCTGACATCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 90 bp | ACAAAGCCTAGTGCTCTGAACACAATGATGATAGGAACTTCTTGCTaGATGTATGGTAACGTTGCCACGATGCGCTGGCCAATAGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: TKPSALNTMMIGTSC*MYGNVATMRWPIAL Trigger: GAGTGCTATTGGCCAGCGCATCGTGGCAACGTTACCATACATCAAGCAAGAAGTTCCTATCATCATTGTGTTCAGAGCACTAGGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TATAGTACTGGTGGGTCGGGAAGAATTCTCCAGGCATaGGCGACATTCTCCTGTATAGGCATACTTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: YSTGGSGRILQA*ATFSCIGILGI Trigger: GATTCCAAGTATGCCTATACAGGAGAATGTCGCTCATGCCTGGAGAATTCTTCCCGACCCACCAGTACTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | TTTCTCATCAAAGTAAGAACTGATCACGATCCAGCATaGTTCCTGCCACAGATCCGGAGTGATCTCATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLIKVRTDHDPA*FLPQIRSDLIV Trigger: GACGATGAGATCACTCCGGATCTGTGGCAGGAAGCATGCTGGATCGTGATCAGTTCTTACTTTGATGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | CCTAGTGCTCTGAACACAATGATGATAGGAACTTCTTaGTTGATGTATGGTAACGTTGCCACGATGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSALNTMMIGTS*LMYGNVATMRW Trigger: CCAGCGCATCGTGGCAACGTTACCATACATCAAGCAAGAAGTTCCTATCATCATTGTGTTCAGAGCACTAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | GCCCCTCTTGAACCGATGAAGTTTAAGGCAACATTCTaGTCTTGGATGACAAACGCTTCATCGAGAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: APLEPMKFKATF*SWMTNASSRDG Trigger: ACCATCTCTCGATGAAGCGTTTGTCATCCAAGAGCAGAATGTTGCCTTAAACTTCATCGGTTCAAGAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | CTTTTCCACAATCAGAAGGGGTCTACAAATACGGCCTaGATCTGTATAGATCCGAATCTCCCGCTCTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LFHNQKGSTNTA*ICIDPNLPLSN Trigger: ATTCGAGAGCGGGAGATTCGGATCTATACAGATGCAGGCCGTATTTGTAGACCCCTTCTGATTGTGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 72 bp | AATTTATATCCTTCCTGGTTGAGAGTGACCATGACCTaGTCCACGATGCCCGTCTCACTAGTTCTGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NLYPSWLRVTMT*STMPVSLVLRK Trigger: TTTCCTCAGAACTAGTGAGACGGGCATCGTGGACCAGGTCATGGTCACTCTCAACCAGGAAGGATATAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | AGGAGTTATGCCTTCGCAAGTGAACGGCATGTCCTCTaGTCTATACTGAATACCACAAGTTCCCTTCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSYAFASERHVL*SILNTTSSLLT Trigger: GGTCAGAAGGGAACTTGTGGTATTCAGTATAGACAAGAGGACATGCCGTTCACTTGCGAAGGCATAACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | GCATCATTAAATGGAGTAGCGTCACCAATTTCACCCTaGTTGGCAGAGACCTTCCCTTGGAGACATTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: ASLNGVASPISP*LAETFPWRHSI Trigger: GATCGAATGTCTCCAAGGGAAGGTCTCTGCCAACAAGGGTGAAATTGGTGACGCTACTCCATTTAATGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | TGTTGCCATAGTGATCTCTGTCGTCTAGTTCTCTTCTaGCTAGGGCTGCTAGAAGCAACCTATGAACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CCHSDLCRLVLF*LGLLEATYEPY Trigger: ATATGGTTCATAGGTTGCTTCTAGCAGCCCTAGGCAGAAGAGAACTAGACGACAGAGATCACTATGGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 72 bp | AGAACAATAAGCTACTTCCTTCTCCTGCAAATCATCTaGAGTCATTGCAAGCATCACGGTCTCCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTISYFLLLQII*SHCKHHGLLFQ Trigger: CTGGAAGAGGAGACCGTGATGCTTGCAATGACTCCAGATGATTTGCAGGAGAAGGAAGTAGCTTATTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | TCATTAAATGGAGTAGCGTCACCAATTTCACCCTTGTaGGCAGAGACCTTCCCTTGGAGACATTCGATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLNGVASPISPL*AETFPWRHSIK Trigger: CTTGATCGAATGTCTCCAAGGGAAGGTCTCTGCCAACAAGGGTGAAATTGGTGACGCTACTCCATTTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TGGGTTTTATTGCGGCATCCCCTGCACTCATATGTATaGGTCCTCGTGTTAGCAATTGCCATTATTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: WVLLRHPLHSYV*VLVLAIAIIPQ Trigger: TTGTGGAATAATGGCAATTGCTAACACGAGGACTCATACATATGAGTGCAGGGGATGCCGCAATAAAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS GCA 72 bp | CTGATCATAGAAACTTCGGATACAATGATGTCCATCTaGCGCCGTAACTTCCTTAGCGTGTTCATGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LIIETSDTMMSI*RRNFLSVFMSC Trigger: ACAACTCATGAACACGCTAAGGAAGTTACGGCGGCAGATGGACATCATTGTATCCGAAGTTTCTATGATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CCA 72 bp | CCTCTTCCAGGGTATCAATATACTCTACTACCCCACTaGCTACCAGATCCTGCCAACTGTAGTTGTTATATT | + |
|
Preference number: 6 (lower is better) Translates to: PLPGYQYTLLPH*LPDPANCSCYI Trigger: AATATAACAACTACAGTTGGCAGGATCTGGTAGCCAGTGGGGTAGTAGAGTATATTGATACCCTGGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 90 bp | CCAGTGGCTAAAGAGTATTTTAGCCCATCAGATATGATCCTTGTCTaGATTGCCAGCTCTAAGTTAAAATCCTTCCCGCGATCAATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PVAKEYFSPSDMILV*IASSKLKSFPRSIN Trigger: GTTTATTGATCGCGGGAAGGATTTTAACTTAGAGCTGGCAATCAAGACAAGGATCATATCTGATGGGCTAAAATACTCTTTAGCCACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | TCTTTGTTATGTCAACGTAAAGCGGAGCAGAATACGTaGGATTTCTTAACCTGGCTTCATTTGGCATCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLCQRKAEQNT*DFLTWLHLASL Trigger: CAATGATGCCAAATGAAGCCAGGTTAAGAAATCTCACGTATTCTGCTCCGCTTTACGTTGACATAACAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | AAAAGGAATAATAGATGCACAGACTCCAAGAATCATTaGTGGGTGAATCTCACAGTGGGTGTAGGTAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: KRNNRCTDSKNH*WVNLTVGVGRT Trigger: TGTTCTACCTACACCCACTGTGAGATTCACCCATCAATGATTCTTGGAGTCTGTGCATCTATTATTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | AAAGAGTATTTTAGCCCATCAGATATGATCCTTGTCTaGATTGCCAGCTCTAAGTTAAAATCCTTCCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: KEYFSPSDMILV*IASSKLKSFPR Trigger: TCGCGGGAAGGATTTTAACTTAGAGCTGGCAATCAAGACAAGGATCATATCTGATGGGCTAAAATACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
||
| CDS TCA 72 bp | GTAGAAAACAGACCTGAAAAAGCCTCGATCCACAGCTaGACGATTCATGATAACAGAGTCTTCTTGATTATA | + |
|
Preference number: 6 (lower is better) Translates to: VENRPEKASIHS*TIHDNRVFLII Trigger: TATAATCAAGAAGACTCTGTTATCATGAATCGTTCAGCTGTGGATCGAGGCTTTTTCAGGTCTGTTTTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS TCA 72 bp | CATGTCTCACGTGTAGGCTTCTCAAACACTTCTTCTTaGTCAAATCCCTTTTTAGACTCTTGTTCTTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: HVSRVGFSNTSS*SNPFLDSCSLY Trigger: ATACAAAGAACAAGAGTCTAAAAAGGGATTTGATCAAGAAGAAGTGTTTGAGAAGCCTACACGTGAGACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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| CDS CAA 72 bp | ACTTGGAATCCTTTTTGGCAAACACATAGACTGTGTTaGTTGCCATTTTCTCTTGAGCTATCAGAACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TWNPFWQTHRLC*LPFSLELSEPF Trigger: AAAAGGTTCTGATAGCTCAAGAGAAAATGGCAACAAACACAGTCTATGTGTTTGCCAAAAAGGATTCCAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031167.6 |
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