Pregenerated sensors for POLK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021668Ensembl transcript IDs: ENSMUST00000022172.12, ENSMUST00000091387.4, ENSMUST00000220977.2, ENSMUST00000221645.2, ENSMUST00000221899.2, ENSMUST00000222075.2, ENSMUST00000222143.2, ENSMUST00000222389.2, ENSMUST00000223475.2
Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGTTGTCCTCAAATTCAGAGATCCACCTaGCTCTGCCTCTGCCTCCCAGTGCTGGGATTAAAGGCGTGCACC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGCPQIQRST*LCLCLPVLGLKACT Trigger: GGTGCACGCCTTTAATCCCAGCACTGGGAGGCAGAGGCAGAGGCAGGTGGATCTCTGAATTTGAGGACAACCTGGTCTACAGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR CCA 90 bp | AGTCCTTCCTTCTGGAGGTCGTGGGCGAGCTCAGCGCACAGTTCTTaGCACAGGCTGTACTGTTCCTCTGTCTTACTTATCTCACTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SPSFWRSWASSAHSS*HRLYCSSVLLISLN Trigger: ATTCAGTGAGATAAGTAAGACAGAGGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGAGCTCGCCCACGACCTCCAGAAGGAAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222075.2 |
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| 3UTR GCA 90 bp | AAGCTAATGTTCTTCATGGACATCATGGCCGATTCTAACTGCATCTaGTCACAGGACACAGAGATGCACACAGGTAGGTACGGAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: KLMFFMDIMADSNCI*SQDTEMHTGRYGSI Trigger: GATGCTTCCGTACCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCATGATGTCCATGAAGAACATTAGCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR TCA 90 bp | CTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCCTGAAGCCTTCTaGAGTCTGTCAGTACTTCTCGAGCTTTCTTTGGGTTGTTTAACT | + |
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Preference number: 1 (lower is better) Translates to: LFVFVPGLLVLPEAF*SLSVLLELSLGCLT Trigger: AGTTAAACAACCCAAAGAAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGGCCAGGAACGAAGACAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR GCA 90 bp | GCTCGTCCTGTTACTACCTCATCTGTACAAGGCTGGACAGAGTCTTaGCTACTTAATGTACTGATGGTTTCATTTTCCAGTGATATAGGA | + |
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Preference number: 1 (lower is better) Translates to: ARPVTTSSVQGWTES*LLNVLMVSFSSDIG Trigger: TCCTATATCACTGGAAAATGAAACCATCAGTACATTAAGTAGGCAAGACTCTGTCCAGCCTTGTACAGATGAGGTAGTAACAGGACGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR GCA 90 bp | GGCAAATATTTCCTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAAATTCACGTTCTTCAGCTTAATGGT | + |
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Preference number: 1 (lower is better) Translates to: GKYFLCSRNGGRNGR*TSFYFKIHVLQLNG Trigger: ACCATTAAGCTGAAGAACGTGAATTTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAGGAAATATTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR TCA 90 bp | TGTAAGATAAGTAAGAATACAAATCACAGGTTTGGACAGGTCCTCTaGACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCC | + |
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Preference number: 1 (lower is better) Translates to: CKISKNTNHRFGQVL*TQIILCITFLKGTA Trigger: GGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAACCTGTGATTTGTATTCTTACTTATCTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR CCA 90 bp | ATGGTTCCAAGATCTGTAAAGCTTGCTGACCCGCAGTTTTACATCTaGATGTGTCTTGACAGTTGGAGATTCTTTCTGATCGCTTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: MVPRSVKLADPQFYI*MCLDSWRFFLIAFY Trigger: ATAAAAAGCGATCAGAAAGAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTACAGATCTTGGAACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR CCA 90 bp | AAAGCTTGGTTTCCAGCTTGTAAGAAACCAATGATGCTCCTTTGTTaGTGTTTCCTGTCATCTTCACTGGAAAAAGTAGACATTCGGACA | + |
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Preference number: 1 (lower is better) Translates to: KAWFPACKKPMMLLC*CFLSSSLEKVDIRT Trigger: TGTCCGAATGTCTACTTTTTCCAGTGAAGATGACAGGAAACACCAACAAAGGAGCATCATTGGTTTCTTACAAGCTGGAAACCAAGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR TCA 90 bp | CTGAAGTCTGTCAGTACTTCTCGAGCTTTCTTTGGGTTGTTTAACTaGATTACCTTCACTATTTCTCAGTTCTTGGATAATACCTTTATT | + |
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Preference number: 1 (lower is better) Translates to: LKSVSTSRAFFGLFN*ITFTISQFLDNTFI Trigger: AATAAAGGTATTATCCAAGAACTGAGAAATAGTGAAGGTAATTCAGTTAAACAACCCAAAGAAAGCTCGAGAAGTACTGACAGACTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR CAA 90 bp | AAGTCCTTCCTTCTGGAGGTCGTGGGCGAGCTCAGCGCACAGTTCTaGGCACAGGCTGTACTGTTCCTCTGTCTTACTTATCTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: KSFLLEVVGELSAQF*AQAVLFLCLTYLTE Trigger: TTCAGTGAGATAAGTAAGACAGAGGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGAGCTCGCCCACGACCTCCAGAAGGAAGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222075.2 |
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| 3UTR-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTTCAATGGCACCATGGTaGCTAAGCATGGAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTSMAPW*LSMEEL Trigger: CAGCTCCTCCATGCTTAGTCACCATGGTGCCATTGA...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATGCACGAGTTTTTACTTCAAATCAGCGCACAGTTCTTaGCACAGGCTGTACTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LCSRNGGRNGRCTSFYFKSAHSS*HRLYCS Trigger: GGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGA...TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCTTAAGTCCTTCCTTCTaGAGGTCGTGGGCGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: KLADPQFYIWMCLDSWRFLSPSF*RSWASS Trigger: TGAGCTCGCCCACGACCTCCAGAAGGAAGGACTTAA...GAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTTTGGACAGGTCCTCTaGACACAGATAATACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: PTTISRDDREAATVSAVTFGQVL*TQIILC Trigger: GCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCCCTTTTGGTCCTTCCTaGAGCCTTCTGAAGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VCLGSRGFVFFKVELFVFPFGPS*SLLKSV Trigger: GACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGG...GAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTAGAGCTCGTCCTGTTACTTTAAGTCCTTCCTTCTaGAGGTCGTGGGCGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: EVSCSRLQTGHTRARPVTLSPSF*RSWASS Trigger: TGAGCTCGCCCACGACCTCCAGAAGGAAGGACTTAA...AGTAACAGGACGAGCTCTAGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTCTTTGGGTTGTTCCTTGCTGCTTTCAATaGTCTGTCTTCCGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FLKPSEVCQYFSSFLWVVPCCFQ*SVFRPC Trigger: ACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGG...AACAACCCAAAGAAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCCCTTGCTGCTTTCAATaGTCTGTCTTCCGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LEYQDIPLCCDYSLECPSPCCFQ*SVFRPC Trigger: ACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGG...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTTGGTCCTTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTAGACTGACACCTTCTTaGTCCCTAAAGCAAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: AFWSFLKPSEVCQYFSSFRLTPS*SLKQTG Trigger: TCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCT...AAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCGCAGCTCCTTGGCAATaGCAAATATTTCCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KLADPQFYIWMCLDSWRFAAPWQ*QIFPLQ Trigger: CTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGC...GAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR CAA 90 bp | CAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTaGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACAC | + |
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Preference number: 2 (lower is better) Translates to: QDIPLCCDYSLECPS*LLSMICLPSLLDLH Trigger: GTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTTTCAAAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCCCTTGCTGCTTTCAATaGTCTGTCTTCCGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: DVSKLSLSFFNAWDGSKIPCCFQ*SVFRPC Trigger: ACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGG...GATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTTTGAAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTGTTCTAGGTTACAAACAGGACACACTAGAGCTCGTCCTGTTACTACCTCTTCCTGAAGCCTTCTaGAGTCTGTCAGTACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SLVLGYKQDTLELVLLLPLPEAF*SLSVLL Trigger: GAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAG...AGGTAGTAACAGGACGAGCTCTAGTGTGTCCTGTTTGTAACCTAGAACAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | CGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCACTATCCCCAGTAGATaGCAAAGCTTGGTTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RLFSRVSILAAFNDLSSVTIPSR*QSLVSS Trigger: GCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGT...GACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCAGACTGACACCTTCTTaGTCCCTAAAGCAAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: VWDLGALFSSKLSSLSSFRLTPS*SLKQTG Trigger: TCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCT...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KLADPQFYIWMCLDSWRFGRNGR*TSFYFK Trigger: TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCC...GAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LGALFSSKLSSLSSFLAFGRNGR*TSFYFK Trigger: TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCC...AAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTGGCAAATATTTCCTCTaGAGTAGAAATGGCGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: LLRLFSRVSILAAFNDLSGKYFL*SRNGGR Trigger: CCGGCCGCCATTTCTACTGCAGAGGAAATATTTGCC...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCTCATCTGTACAAGGCTaGACAGAGTCTTGCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: VWDLGALFSSKLSSLSSFSSVQG*TESCLL Trigger: AAGTAGGCAAGACTCTGTCCAGCCTTGTACAGATGA...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTTCAGCGCACAGTTCTTaGCACAGGCTGTACTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LKRVRSEVSCSRLQTGHTSAHSS*HRLYCS Trigger: GGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGA...AGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | GATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCGCAGCTCCTTGGCAATaGCAAATATTTCCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: DYSLECPSLLLSMICLPSAAPWQ*QIFPLQ Trigger: CTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGC...GGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGTTGACTATCCCCAGTAGATaGCAAAGCTTGGTTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CLQRKHVSNRIFLSSHWLTIPSR*QSLVSS Trigger: GCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGT...CAACCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | GACGGTCCATCAAGACACTCATCTACATGTTCATTAAAGGCTTCCAGACTGACAAGACTGACACCTTCTTaGTCCCTAAAGCAAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: DGPSRHSSTCSLKASRLTRLTPS*SLKQTG Trigger: TCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCT...TGTCAGTCTGGAAGCCTTTAATGAACATGTAGATGAGTGTCTTGATGGACCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTTGGTCCTTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTGACATTCCTCTTTGCTaGGATTATTCTCTAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: AFWSFLKPSEVCQYFSSFDIPLC*DYSLEC Trigger: ACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTC...AAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTACTATGTACATCTTCCTTCTaGCCAATGTCTGCAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLLSMICLPSLLDLHHLLCTSSF*PMSAEE Trigger: TTCCTCTGCAGACATTGGTCAGAAGGAAGATGTACA...TAGTAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTGGCAAATATTTCCTCTaGAGTAGAAATGGCGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: IFLSSHWLTVHQDTHLHVGKYFL*SRNGGR Trigger: CCGGCCGCCATTTCTACTGCAGAGGAAATATTTGCC...AACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCATGTGTCTTGACAGTTaGAGATTCTTTCTGATCGCT | + |
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Preference number: 2 (lower is better) Translates to: VWDLGALFSSKLSSLSSFMCLDS*RFFLIA Trigger: AGCGATCAGAAAGAATCTCCAACTGTCAAGACACAT...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | AAATATTTCCTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATGCACGAGTTTTATGTGTCTTGACAGTTaGAGATTCTTTCTGATCGCT | + |
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Preference number: 2 (lower is better) Translates to: KYFLCSRNGGRNGRCTSFMCLDS*RFFLIA Trigger: AGCGATCAGAAAGAATCTCCAACTGTCAAGACACAT...AAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAGGAAATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCAGGACAAGACTTGTCTaGAATATCAGGACATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LRLFSRVSILAAFNDLSSRTRLV*NIRTFL Trigger: GAGGAATGTCCTGATATTCCAGACAAGTCTTGTCCT...GGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTCTTTGGGTTGTTAGGACAAGACTTGTCTaGAATATCAGGACATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FLKPSEVCQYFSSFLWVVRTRLV*NIRTFL Trigger: GAGGAATGTCCTGATATTCCAGACAAGTCTTGTCCT...AACAACCCAAAGAAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTATCCCCAGTAGATGACAAAGCTTGGTTTCCAGCTTGTAAGAAACCAATGCATCTGGATGTGTCTTaGCAGTTGGAGATTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLSPVDDKAWFPACKKPMHLDVS*QLEILS Trigger: AGAAAGAATCTCCAACTGTCAAGACACATCCAGATG...CATTGGTTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGCACCATCTACTAAAGTaGTCTCTCCATTTTCATGCC | + |
|
Preference number: 2 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWHHLLK*SLHFHA Trigger: GGCATGAAAATGGAGAGATCACTTTAGTAGATGGTG...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTGTTCTAGGTTACAAACAGGACACACTAGAGCTCGTCCTGTTACTACCTGACATTCCTCTTTGCTaGGATTATTCTCTAGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLVLGYKQDTLELVLLLPDIPLC*DYSLEC Trigger: ACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTC...AGGTAGTAACAGGACGAGCTCTAGTGTGTCCTGTTTGTAACCTAGAACAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTGTGGCTCAGAGTCCTTaGAAATATTTTATATCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTVAQSP*KYFISI Trigger: AATGGATATAAAATATTTCCAAGGACTCTGAGCCAC...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCAGCTTCTTTAATGCTTaGGATGGTTCCAAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRLFSRVSILAAFNDLSSSFFNA*DGSKIC Trigger: ACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCT...GGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCTTTTTGAGTTCTCACTaGTTGACGGTCCATCAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LFSSKLSSLSSFLAFWSFFLSSH*LTVHQD Trigger: GTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA...GAAGGACCAAAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTTGCTCCCTAAAGCAAACTTCCTTAGCAGCTCCTTaGCAATGGCAAATATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TCSLKASRLTPSCSLKQTSLAAP*QWQIFP Trigger: AGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGA...AGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGTTGTCCTTAGCAGCTCCTTaGCAATGGCAAATATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLQRKHVSNRIFLSSHWLSLAAP*QWQIFP Trigger: AGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGA...CAACCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CAA 90 bp | CATGGAGGAGCTGATGGTGAGGTTGCTCCATGTGGCTCAGAGTCCTaGGAAATATTTTATATCCATTATAAAATAACGCATCACTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HGGADGEVAPCGSES*EIFYIHYKITHHFL Trigger: CAGAAAGTGATGCGTTATTTTATAATGGATATAAAATATTTCCAAGGACTCTGAGCCACATGGAGCAACCTCACCATCAGCTCCTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR CAA 90 bp | AGTGATATAGGACAAGACTTGTCTGGAATATCAGGACATTCCTCTTaGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SDIGQDLSGISGHSS*LRLFSRVSILAAFN Trigger: ATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAGACAAGTCTTGTCCTATATCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGGCCTACTTAATGTACTaGTGGTTTCATTTTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWAYLMY*WFHFPV Trigger: CACTGGAAAATGAAACCATCAGTACATTAAGTAGGC...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCGCCTACTTAATGTACTaGTGGTTTCATTTTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LFSSKLSSLSSFLAFWSFAYLMY*WFHFPV Trigger: CACTGGAAAATGAAACCATCAGTACATTAAGTAGGC...GAAGGACCAAAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCTGTTTTCTTCAAAGTTaGGCTCTTTGTCTTCGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFSSKLSSLSSFLAFWSFCFLQS*ALCLRS Trigger: GGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACA...GAAGGACCAAAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTCTTGTAAGAAACCAATaGTGCTCCTTTGTTGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLRLFSRVSILAAFNDLSLVRNQ*CSFVGV Trigger: AACACCAACAAAGGAGCATCATTGGTTTCTTACAAG...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCGTAGATGACAAAGCTTaGTTTCCAGCTTGTAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LEYQDIPLCCDYSLECPSVDDKA*FPACKK Trigger: TTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTAC...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CAA 90 bp | ACACTCATCTACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGGACATATAAATGTCTGACAGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: TLIYMFIKGFQTDTF*LPKANWTYKCLTVI Trigger: AATGACTGTCAGACATTTATATGTCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGTAGATGAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTAGCTTCTTTAATGCTTaGGATGGTTCCAAGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LKRVRSEVSCSRLQTGHTSFFNA*DGSKIC Trigger: ACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCT...AGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGCTCCCTAAAGCAAACTaGACATATAAATGTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWLPKAN*TYKCLT Trigger: TGTCAGACATTTATATGTCCAGTTTGCTTTAGGGAG...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTTGCTCCCTAAAGCAAACTCTCCCTAAAGCAAACTaGACATATAAATGTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: TCSLKASRLTPSCSLKQTLPKAN*TYKCLT Trigger: TGTCAGACATTTATATGTCCAGTTTGCTTTAGGGAG...AGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATCCACATGTATGTTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTATCATCTGTACAAGGCTaGACAGAGTCTTGCCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: ISTCMLKRVRSEVSCSRLSSVQG*TESCLL Trigger: AAGTAGGCAAGACTCTGTCCAGCCTTGTACAGATGA...TAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAACATACATGTGGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATCCACATGTATGTTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACATCTGGATGTGTCTTaGCAGTTGGAGATTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ISTCMLKRVRSEVSCSRLHLDVS*QLEILS Trigger: AGAAAGAATCTCCAACTGTCAAGACACATCCAGATG...TAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAACATACATGTGGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR GCA 72 bp | CCAGGTTGTCCTCAAATTCAGAGATCCACCTGCCTCTaGCTCTGCCTCCCAGTGCTGGGATTAAAGGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGCPQIQRSTCL*LCLPVLGLKAC Trigger: GCACGCCTTTAATCCCAGCACTGGGAGGCAGAGGCAGAGGCAGGTGGATCTCTGAATTTGAGGACAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR CCA 72 bp | TTAATGGTGACGGTTCTTCCCTTAAGTCCTTCCTTCTaGAGGTCGTGGGCGAGCTCAGCGCACAGTTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LMVTVLPLSPSF*RSWASSAHSSW Trigger: CCAAGAACTGTGCGCTGAGCTCGCCCACGACCTCCAGAAGGAAGGACTTAAGGGAAGAACCGTCACCATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGGAGCTGATGGTGAGGTaGCTCCATGTGGCTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: MADSNCICSQDTEMHTGRELMVR*LHVAQS Trigger: ACTCTGAGCCACATGGAGCAACCTCACCATCAGCTC...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR GCA 72 bp | TTCTTCATGGACATCATGGCCGATTCTAACTGCATCTaGTCACAGGACACAGAGATGCACACAGGTAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FFMDIMADSNCI*SQDTEMHTGRY Trigger: GTACCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCATGATGTCCATGAAGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTATACAAATCACAGGTTaGGACAGGTCCTCTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PTTISRDDREAATVSAVTIQITG*DRSSEH Trigger: GTGTTCAGAGGACCTGTCCAAACCTGTGATTTGTAT...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTAGTAGGGGAGGCATTATaGCACTTGTCTTCCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLVGEAL*HLSSLK Trigger: CTTTAAGGAAGACAAGTGCAATAATGCCTCCCCTAC...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRLFSRVSILAAFNDLSSQTDTF*LPKANW Trigger: CCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTG...GGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR GCA 72 bp | CTAATGTTCTTCATGGACATCATGGCCGATTCTAACTaGATCTGCTCACAGGACACAGAGATGCACACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LMFFMDIMADSN*ICSQDTEMHTG Trigger: ACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCATGATGTCCATGAAGAACATTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR CCA 72 bp | AGTAGGGTTTCTCTGTGTGGTCCAGGCTGTTCTTTCTaGAACTCACTCTGTAGACCAGGTTGTCCTCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SRVSLCGPGCSF*NSLCRPGCPQI Trigger: AATTTGAGGACAACCTGGTCTACAGAGTGAGTTCCAGAAAGAACAGCCTGGACCACACAGAGAAACCCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTGAGGCATTATTGCACTaGTCTTCCTTAAAGGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: PTTISRDDREAATVSAVTEALLH*SSLKEY Trigger: GTATTCCTTTAAGGAAGACAAGTGCAATAATGCCTC...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | ATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISGHSSLLRLFSRVSILAQTDTF*LPKANW Trigger: CCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTG...AGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTATCCCCAGTAGATGACAAAGCTTGGTTTCCAGCTTGTAAGAAACCAATGCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLSPVDDKAWFPACKKPMQTDTF*LPKANW Trigger: CCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTG...CATTGGTTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGAGTTCTCACTGGTaGACGGTCCATCAAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: LEYQDIPLCCDYSLECPSLSSHW*TVHQDT Trigger: AGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAA...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR GCA 72 bp | TTCCTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAAATTCACGTTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLCSRNGGRNGR*TSFYFKIHVLQ Trigger: CTGAAGAACGTGAATTTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CCA 72 bp | AGAGCTCGTCCTGTTACTACCTCATCTGTACAAGGCTaGACAGAGTCTTGCCTACTTAATGTACTGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RARPVTTSSVQG*TESCLLNVLMV Trigger: AACCATCAGTACATTAAGTAGGCAAGACTCTGTCCAGCCTTGTACAGATGAGGTAGTAACAGGACGAGCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTTGCTCCCTAAAGCAAACTTTGAGTTCTCACTGGTaGACGGTCCATCAAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: TCSLKASRLTPSCSLKQTLSSHW*TVHQDT Trigger: AGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAA...AGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGAAATGATGCTCCTTTGTaGGTGTTTCCTGTCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VKLADPQFYIWMCLDSWRNDAPL*VFPVIF Trigger: GAAGATGACAGGAAACACCAACAAAGGAGCATCATT...TCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTATGTGGCTCAGAGTCCTaGGAAATATTTTATATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLCGSES*EIFYIH Trigger: ATGGATATAAAATATTTCCAAGGACTCTGAGCCACA...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTAGTAACAGGATATTTTaGAGTTCTCACTGGTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: LGALFSSKLSSLSSFLAFSNRIF*SSHWLT Trigger: CGTCAACCAGTGAGAACTCAAAAATATCCTGTTACT...AAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CCA 72 bp | AGATCTGTAAAGCTTGCTGACCCGCAGTTTTACATCTaGATGTGTCTTGACAGTTGGAGATTCTTTCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RSVKLADPQFYI*MCLDSWRFFLI Trigger: GATCAGAAAGAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTACAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTTTGCAAGCTCAGTTTaGTCAGTTTTGTCTAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: LGALFSSKLSSLSSFLAFFASSV*SVLSRL Trigger: TAGTCTAGACAAAACTGACAAAACTGAGCTTGCAAA...AAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CCA 72 bp | GTTTTGTCTAGACTATCCCCAGTAGATGACAAAGCTTaGTTTCCAGCTTGTAAGAAACCAATGATGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLSRLSPVDDKA*FPACKKPMMLL Trigger: AAGGAGCATCATTGGTTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCTAGACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTAATGATGCTCCTTTGTaGGTGTTTCCTGTCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LKRVRSEVSCSRLQTGHTNDAPL*VFPVIF Trigger: GAAGATGACAGGAAACACCAACAAAGGAGCATCATT...AGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | GATATAGGACAAGACTTGTCTGGAATATCAGGACATTCCTCTTTGCTGCGATTAAGTAACAGGATATTTTaGAGTTCTCACTGGTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: DIGQDLSGISGHSSLLRLSNRIF*SSHWLT Trigger: CGTCAACCAGTGAGAACTCAAAAATATCCTGTTACT...TAATCGCAGCAAAGAGGAATGTCCTGATATTCCAGACAAGTCTTGTCCTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTGATATAGGACAAGACTaGTCTGGAATATCAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LKRVRSEVSCSRLQTGHTDIGQD*SGISGH Trigger: ATGTCCTGATATTCCAGACAAGTCTTGTCCTATATC...AGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGGGCAAATATTTCCTCTaGAGTAGAAATGGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MADSNCICSQDTEMHTGRGKYFL*SRNGGR Trigger: CCGGCCGCCATTTCTACTGCAGAGGAAATATTTGCC...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTTAAGTCCTTCCTTCTaGAGGTCGTGGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTLSPSF*RSWASS Trigger: TGAGCTCGCCCACGACCTCCAGAAGGAAGGACTTAA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTAAATCCTGGCATGGCTaGACGGACACCAAACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTKSWHG*TDTKPP Trigger: AGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTT...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTCTTAGCAATAAATCCTaGCATGGCTGCACGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTLSNKS*HGCTDT Trigger: GGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAG...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGTTGCTAACATTGTATTaGGGGCGATGCCTGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATLLTLY*GRCLRW Trigger: CCAGCGCAGGCATCGCCCCCAATACAATGTTAGCAA...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTTCAGCGCACAGTTCTTaGCACAGGCTGTACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTSAHSS*HRLYCS Trigger: GGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGA...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTTGCTGACCCGCAGTCAGCGCACAGTTCTTaGCACAGGCTGTACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLMLGMVPRSVKLADPQSAHSS*HRLYCS Trigger: GGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGA...CTGCGGGTCAGCAAGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTCGTTCCTGGCCTTTTaGTCCTTCCTGAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTSFLAF*SFLKPS Trigger: AGAAGGCTTCAGGAAGGACCAAAAGGCCAGGAACGA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGCCTTGCTGCTTTCAATaGTCTGTCTTCCGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATPCCFQ*SVFRPC Trigger: ACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGG...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCCTTTTGGTCCTTCCTaGAGCCTTCTGAAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTPFGPS*SLLKSV Trigger: GACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTPHFHS*IESVHV Trigger: GACATGGACGCTTTCTATGCAGCTGTGGAAATGAGG...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGTCCTCAGGCCAATCTTaGCTTTCCTGCAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGSSGQS*LSCKCC Trigger: ACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGA...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGTGGATCCTACAGCAATaGGTTTATCCTTCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MADSNCICSQDTEMHTGRWILQQ*VYPSVP Trigger: CGGAACTGAAGGATAAACCCATTGCTGTAGGATCCA...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGGCAGGAGGTCGTCTTTaGAGTTGTCCTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGAGGRL*SCPFPL Trigger: CAAAGGAAAAGGACAACTTCAAAGACGACCTCCTGC...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTACTATCCCCAGTAGATaGCAAAGCTTGGTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTTIPSR*QSLVSS Trigger: GCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGT...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTCCTGAAGCCTTCTaGAGTCTGTCAGTACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTLPEAF*SLSVLL Trigger: GAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | GTAAAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATCCTCAGGCCAATCTTaGCTTTCCTGCAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLADPQFYIWMCLDSWRSSGQS*LSCKCC Trigger: ACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGA...TCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGGACTTCCTTGGGGTTaGAAATCAGGAGGACTATCT | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATGLPWG*KSGGLS Trigger: AGATAGTCCTCCTGATTTGCAACCCCAAGGAAGTCC...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTGGCAAATATTTCCTCTaGAGTAGAAATGGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGALFSSKLSSLSSFLAFGKYFL*SRNGGR Trigger: CCGGCCGCCATTTCTACTGCAGAGGAAATATTTGCC...AAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTTAGCAATAAATCCTaGCATGGCTGCACGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: VWDLGALFSSKLSSLSSFLSNKS*HGCTDT Trigger: GGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAG...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CCA 90 bp | CTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCTTAAGTCCTTCCTTCTaGAGGTCGTGGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLFSRVSILAAFNDLSSLSPSF*RSWASS Trigger: TGAGCTCGCCCACGACCTCCAGAAGGAAGGACTTAA...GGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGGCAGCTCCTTGGCAATaGCAAATATTTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGAAPWQ*QIFPLQ Trigger: CTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGC...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGTTTTTGAGTTCTCACTaGTTGACGGTCCATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MADSNCICSQDTEMHTGRFLSSH*LTVHQD Trigger: GTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCACTATCCCCAGTAGATaGCAAAGCTTGGTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLADPQFYIWMCLDSWRFTIPSR*QSLVSS Trigger: GCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGT...GAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTTGTACATCTTCCTTCTaGCCAATGTCTGCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTCTSSF*PMSAEE Trigger: TTCCTCTGCAGACATTGGTCAGAAGGAAGATGTACA...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGACACCAAACCTCCTTaGATGGTAATTCGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATDTKPP*MVIRSS Trigger: GCTACTTCGAATTACCATGCAAGGAGGTTTGGTGTC...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | ACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTTGCTCCCTAAAGCAAACTAAATCCTGGCATGGCTaGACGGACACCAAACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCSLKASRLTPSCSLKQTKSWHG*TDTKPP Trigger: AGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTT...AGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | TTAACTTCTGTCCTTAGCAGCTCCTTGGCAATGGCAAATATTTCCTCTGCAGTAAAATCCTGGCATGGCTaGACGGACACCAAACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLSSSLAMANISSAVKSWHG*TDTKPP Trigger: AGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTT...TACTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGACAGAAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGAAATCCTGGCATGGCTaGACGGACACCAAACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWKSWHG*TDTKPP Trigger: AGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTT...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTAGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLGRNGR*TSFYFK Trigger: TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCC...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGAGACTGACACCTTCTTaGTCCCTAAAGCAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATRLTPS*SLKQTG Trigger: TCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCT...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGGCTGGACAGAGTCTTaGCTACTTAATGTACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATGWTES*LLNVLM Trigger: CATCAGTACATTAAGTAGGCAAGACTCTGTCCAGCC...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTTCTAGGTTACAAACAGGACACACTAGAGCTCGTCCTGTTACTACCTCTTAGCAATAAATCCTaGCATGGCTGCACGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLVLGYKQDTLELVLLLPLSNKS*HGCTDT Trigger: GGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAG...AGGTAGTAACAGGACGAGCTCTAGTGTGTCCTGTTTGTAACCTAGAACAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGTCTTCAGAGTTCAGTTaGAAAGGACTTCCTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATSSEFS*KGLPWG Trigger: ACCCCAAGGAAGTCCTTTCCAACTGAACTCTGAAGA...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTAGGACAAGACTTGTCTaGAATATCAGGACATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTRTRLV*NIRTFL Trigger: GAGGAATGTCCTGATATTCCAGACAAGTCTTGTCCT...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTATCATCTGTACAAGGCTaGACAGAGTCTTGCCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLSSVQG*TESCLL Trigger: AAGTAGGCAAGACTCTGTCCAGCCTTGTACAGATGA...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCGCAGGAGGTCGTCTTTaGAGTTGTCCTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEYQDIPLCCDYSLECPSAGGRL*SCPFPL Trigger: CAAAGGAAAAGGACAACTTCAAAGACGACCTCCTGC...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTATTGTCAACCTGTAATTaGGCTTTCCTTAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLLSTCN*AFLSCW Trigger: CCAGCAACTAAGGAAAGCTCAATTACAGGTTGACAA...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGTCTTACTTATCTCACTaGATGTCCTTTCAACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MADSNCICSQDTEMHTGRSYLSH*MSFQHS Trigger: TGAGTGTTGAAAGGACATTCAGTGAGATAAGTAAGA...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTACATCTGGATGTGTCTTaGCAGTTGGAGATTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLHLDVS*QLEILS Trigger: AGAAAGAATCTCCAACTGTCAAGACACATCCAGATG...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGCACCATCTACTAAAGTaGTCTCTCCATTTTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGHHLLK*SLHFHA Trigger: GGCATGAAAATGGAGAGATCACTTTAGTAGATGGTG...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTGTTTTCTTCAAAGTTaGGCTCTTTGTCTTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTCFLQS*ALCLRS Trigger: GGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTCAATCTTGCCTTTCCTaGAAGTGCTGTGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTQSCLS*KCCVIF Trigger: GAATATAACACAGCACTTGCAGGAAAGGCAAGATTG...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCTCCTCAGGCCAATCTTaGCTTTCCTGCAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSSKLSSLSSFLAFWSFSSGQS*LSCKCC Trigger: ACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGA...GAAGGACCAAAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGTCCTTTCAACACTCATaGTTTTCCTTTCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATSFQHS*FSFLHP Trigger: GGGATGGAGAAAGGAAAAGCATGAGTGTTGAAAGGA...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCATTTCCATAAAATCTaGACCCCTTTGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTHFHKI*TPLWLP Trigger: TGGAAGCCACAAAGGGGTCCAGATTTTATGGAAATG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCGCACAGTTCTTGGCACAGGCTGTACTGTTCCTCTGTCTTACTTATCTCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQRTVLGTGCTVPLSYLSHYNKL*AEPLSN Trigger: ATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTG...AGATAAGTAAGACAGAGGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222075.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGCTGGTACTGTCCGTTTaGCTTATTCTTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATLVLSV*LILITA Trigger: TGCAGTGATAAGAATAAGCCAAACGGACAGTACCAG...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGTCCTTAGCAGCTCCTTaGCAATGGCAAATATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGSLAAP*QWQIFP Trigger: AGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGA...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGGTAGATGACAAAGCTTaGTTTCCAGCTTGTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MADSNCICSQDTEMHTGRVDDKA*FPACKK Trigger: TTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTAC...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTAGCTTCTTTAATGCTTaGGATGGTTCCAAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTTISRDDREAATVSAVTSFFNA*DGSKIC Trigger: ACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCT...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| 3UTR CAA 72 bp | CCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTaGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLCCDYSLECPS*LLSMICLPSLL Trigger: TAACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTGCAGGAGGTCGTCTTTaGAGTTGTCCTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSLSFFNAWDGSKICKAAGGRL*SCPFPL Trigger: CAAAGGAAAAGGACAACTTCAAAGACGACCTCCTGC...AGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | ATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCAGGAGGTCGTCTTTaGAGTTGTCCTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSSLLRLFSRVSILAAGGRL*SCPFPL Trigger: CAAAGGAAAAGGACAACTTCAAAGACGACCTCCTGC...AGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGTGCTGGCTGGTAATTTaGGCTTTTTGTTGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGCWLVI*AFCCII Trigger: TATGATGCAACAAAAAGCTCAAATTACCAGCCAGCA...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGCGTCCATGTCAACATaGACTATGGTATTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATASMST*TMVLFK Trigger: TTTGAACAATACCATAGTTCATGTTGACATGGACGC...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTGTAAGAAACCAATaGTGCTCCTTTGTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTLVRNQ*CSFVGV Trigger: AACACCAACAAAGGAGCATCATTGGTTTCTTACAAG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTAGCCTACTTAATGTACTaGTGGTTTCATTTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLAYLMY*WFHFPV Trigger: CACTGGAAAATGAAACCATCAGTACATTAAGTAGGC...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR GCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFSRVSILAAFNDLSPHFHS*IESVHV Trigger: GACATGGACGCTTTCTATGCAGCTGTGGAAATGAGG...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCAGTTTTGTCTAGACTATCCCCAGTAGATGACAAAGCTTGGTTTCCAGCTCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVLSRLSPVDDKAWFPAPHFHS*IESVHV Trigger: GACATGGACGCTTTCTATGCAGCTGTGGAAATGAGG...AGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCTAGACAAAACTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTCATTCCTCAGGCCAATCTTaGCTTTCCTGCAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSSHWLTVHQDTHLHVHSSGQS*LSCKCC Trigger: ACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGA...ATGAACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR GCA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCTCCTTTCAACACTCATaGTTTTCCTTTCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWDLGALFSSKLSSLSSFSFQHS*FSFLHP Trigger: GGGATGGAGAAAGGAAAAGCATGAGTGTTGAAAGGA...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTAGACATTCCTCTTTGCTaGGATTATTCTCTAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLDIPLC*DYSLEC Trigger: ACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTC...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CCA 90 bp | AAATATTTCCTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATGCACGAGTTTTCATTTCCATAAAATCTaGACCCCTTTGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYFLCSRNGGRNGRCTSFHFHKI*TPLWLP Trigger: TGGAAGCCACAAAGGGGTCCAGATTTTATGGAAATG...AAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAGGAAATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CCA 90 bp | TTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTCATCTTAGCAATAAATCCTaGCATGGCTGCACGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSHWLTVHQDTHLHVHLSNKS*HGCTDT Trigger: GGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAG...ATGAACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTHYNKL*AEPLSN Trigger: ATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CCA 90 bp | AGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCTCTGGTACTGTCCGTTTaGCTTATTCTTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLTRSFTSGCVLTVGDSLVLSV*LILITA Trigger: TGCAGTGATAAGAATAAGCCAAACGGACAGTACCAG...AGAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTACTAGCAGCTCCTTGGCAATaGCAAATATTTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSMICLPSLLDLHHLLAAPWQ*QIFPLQ Trigger: CTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGC...TAGTAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
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| CDS-3UTR CCA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGATGTGTCTTGACAGTTaGAGATTCTTTCTGATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AANLSPTTISRDDREAATMCLDS*RFFLIA Trigger: AGCGATCAGAAAGAATCTCCAACTGTCAAGACACAT...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| 3UTR CAA 72 bp | TGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTaGAGTTCTCACTGGTTGACGGTCCATCAAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRKHVSNRIF*SSHWLTVHQDT Trigger: AGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| 3UTR CAA 72 bp | GGACAAGACTTGTCTGGAATATCAGGACATTCCTCTTaGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQDLSGISGHSS*LRLFSRVSILA Trigger: AGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAGACAAGTCTTGTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR TCA 90 bp | GTAAAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGAGCGTCCATGTCAACATaGACTATGGTATTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLADPQFYIWMCLDSWRASMST*TMVLFK Trigger: TTTGAACAATACCATAGTTCATGTTGACATGGACGC...TCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR GCA 90 bp | CTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTTGCCAATCTTGCCTTTCCTaGAAGTGCTGTGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFFNAWDGSKICKACQSCLS*KCCVIF Trigger: GAATATAACACAGCACTTGCAGGAAAGGCAAGATTG...GCAAGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTGGCCGGAACGGTAGATaGACGAGTTTTTACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFSRVSILAAFNDLSGRNGR*TSFYFK Trigger: TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCC...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CCA 90 bp | GATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCCATTTCCATAAAATCTaGACCCCTTTGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLECPSLLLSMICLPSHFHKI*TPLWLP Trigger: TGGAAGCCACAAAGGGGTCCAGATTTTATGGAAATG...GGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | CGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCATTTCCATAAAATCTaGACCCCTTTGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLFSRVSILAAFNDLSSVHFHKI*TPLWLP Trigger: TGGAAGCCACAAAGGGGTCCAGATTTTATGGAAATG...GACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTATCCTTAGCAGCTCCTTaGCAATGGCAAATATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSMICLPSLLDLHHLSLAAP*QWQIFP Trigger: AGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGA...TAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTCCCTAAAGCAAACTaGACATATAAATGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTLPKAN*TYKCLT Trigger: TGTCAGACATTTATATGTCCAGTTTGCTTTAGGGAG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR TCA 90 bp | GATGTTTCAAAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTTGTCAACCTGTAATTaGGCTTTCCTTAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKLSLSFFNAWDGSKILSTCN*AFLSCW Trigger: CCAGCAACTAAGGAAAGCTCAATTACAGGTTGACAA...GATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTTTGAAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | TTAACTTCTGTCCTTAGCAGCTCCTTGGCAATGGCAAATATTTCCTCTGCAGTATTGTCAACCTGTAATTaGGCTTTCCTTAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLSSSLAMANISSAVLSTCN*AFLSCW Trigger: CCAGCAACTAAGGAAAGCTCAATTACAGGTTGACAA...TACTGCAGAGGAAATATTTGCCATTGCCAAGGAGCTGCTAAGGACAGAAGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTTTGTCAACCTGTAATTaGGCTTTCCTTAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSLSFFNAWDGSKICKALSTCN*AFLSCW Trigger: CCAGCAACTAAGGAAAGCTCAATTACAGGTTGACAA...AGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR TCA 90 bp | GATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCGCGTCCATGTCAACATaGACTATGGTATTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLECPSLLLSMICLPSASMST*TMVLFK Trigger: TTTGAACAATACCATAGTTCATGTTGACATGGACGC...GGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | GCACGAGTTTTTACTTCAAAATTCACGTTCTTCAGCTTAATGGTGACGGTTCTTCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARVFTSKFTFFSLMVTVLPHFHS*IESVHV Trigger: GACATGGACGCTTTCTATGCAGCTGTGGAAATGAGG...AAGAACCGTCACCATTAAGCTGAAGAACGTGAATTTTGAAGTAAAAACTCGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTGCTTATTCTTATCACTaGACACTTTTGCTAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTAYSYH*TLLLTL Trigger: CAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGC...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CCA 90 bp | AGACACTCATCTACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTTGCTCCCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RHSSTCSLKASRLTPSCSHYNKL*AEPLSN Trigger: ATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTG...GGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGTAGATGAGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTCTGGTACTGTCCGTTTaGCTTATTCTTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFSRVSILAAFNDLSLVLSV*LILITA Trigger: TGCAGTGATAAGAATAAGCCAAACGGACAGTACCAG...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| 3UTR CAA 72 bp | ATTTCTAAGGGCTTTGCAAGCTCAGTTTTGTCAGTTTaGTCTAGACTATCCCCAGTAGATGACAAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISKGFASSVLSV*SRLSPVDDKAW Trigger: CCAAGCTTTGTCATCTACTGGGGATAGTCTAGACAAAACTGACAAAACTGAGCTTGCAAAGCCCTTAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTGCGTCCATGTCAACATaGACTATGGTATTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFSRVSILAAFNDLSASMST*TMVLFK Trigger: TTTGAACAATACCATAGTTCATGTTGACATGGACGC...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTAGAGCTCGTCCTGTTACTTCTTACTTATCTCACTaGATGTCCTTTCAACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVSCSRLQTGHTRARPVTSYLSH*MSFQHS Trigger: TGAGTGTTGAAAGGACATTCAGTGAGATAAGTAAGA...AGTAACAGGACGAGCTCTAGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
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| CDS-3UTR TCA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGCTTGTAAGAAACCAATaGTGCTCCTTTGTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWLVRNQ*CSFVGV Trigger: AACACCAACAAAGGAGCATCATTGGTTTCTTACAAG...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR GCA 90 bp | AGACTATCCCCAGTAGATGACAAAGCTTGGTTTCCAGCTTGTAAGAAACCAATGCAATCTTGCCTTTCCTaGAAGTGCTGTGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSPVDDKAWFPACKKPMQSCLS*KCCVIF Trigger: GAATATAACACAGCACTTGCAGGAAAGGCAAGATTG...CATTGGTTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTACAAACAGGACACACTCAATCTTGCCTTTCCTaGAAGTGCTGTGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRVRSEVSCSRLQTGHTQSCLS*KCCVIF Trigger: GAATATAACACAGCACTTGCAGGAAAGGCAAGATTG...AGTGTGTCCTGTTTGTAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCGCTTATTCTTATCACTaGACACTTTTGCTAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LEYQDIPLCCDYSLECPSAYSYH*TLLLTL Trigger: CAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGC...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTACTAGTAGATGACAAAGCTTaGTTTCCAGCTTGTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSMICLPSLLDLHHLLVDDKA*FPACKK Trigger: TTTCTTACAAGCTGGAAACCAAGCTTTGTCATCTAC...TAGTAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| 3UTR CAA 72 bp | TACATGTTCATTAAAGGCTTCCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGGACATATAAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YMFIKGFQTDTF*LPKANWTYKCL Trigger: CAGACATTTATATGTCCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTGGAAGCCTTTAATGAACATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| 3UTR CAA 72 bp | CATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGTaGACGGTCCATCAAGACACTCATCTACATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVSNRIFLSSHW*TVHQDTHLHVH Trigger: ATGAACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAATATCCTGTTACTCACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | GCACGAGTTTTTACTTCAAAATTCACGTTCTTCAGCTTAATGGTGACGGTTCTTCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARVFTSKFTFFSLMVTVLHYNKL*AEPLSN Trigger: ATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTG...AAGAACCGTCACCATTAAGCTGAAGAACGTGAATTTTGAAGTAAAAACTCGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTTTGCTAACATTGTATTaGGGGCGATGCCGATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSSHWLTVHQDTHLHVLLTLY*GRCRFL Trigger: TAAAAATCGGCATCGCCCCCAATACAATGTTAGCAA...AACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTCATGCTTATTCTTATCACTaGACACTTTTGCTAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSSHWLTVHQDTHLHVHAYSYH*TLLLTL Trigger: CAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGC...ATGAACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CCA 90 bp | ATATCCACATGTATGTTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTATTGCTAACATTGTATTaGGGGCGATGCCGATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISTCMLKRVRSEVSCSRLLLTLY*GRCRFL Trigger: TAAAAATCGGCATCGCCCCCAATACAATGTTAGCAA...TAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAACATACATGTGGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGCCCTTGCCAGGTCTGTaGAACCTAGACCCAGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRPLPGL*NLDPAR Trigger: TCGCGCTGGGTCTAGGTTCAACAGACCTGGCAAGGG...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRVLRPI*PFLQVL Trigger: CAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGAC...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTTGCTGACCCGCAGCCCTTGCCAGGTCTGTaGAACCTAGACCCAGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLMLGMVPRSVKLADPQPLPGL*NLDPAR Trigger: TCGCGCTGGGTCTAGGTTCAACAGACCTGGCAAGGG...CTGCGGGTCAGCAAGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
||
| CDS-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTCCTTCAGTTCCGGGTaGTCCCTCATTTCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTTISRDDREAATVSAVTSFSSG*SLISTA Trigger: AGCTGTGGAAATGAGGGACAACCCGGAACTGAAGGA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTTTGCTAACATTGTATaGGGGGCGATGCCTGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTISRDDREAATVSAVTFANIV*GAMPAL Trigger: CAGCGCAGGCATCGCCCCCAATACAATGTTAGCAAA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS GCA 90 bp | TGCTGGGAAGGATCTGGTACTGTCCGTTTGGCTTATTCTTATCACTaGACACTTTTGCTAACATTGTATTGGGGGCGATGCCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWEGSGTVRLAYSYH*TLLLTLYWGRCLRW Trigger: CCAGCGCAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCCTTCCCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGCTAATAGGCAGGTCCTaGATGAAGTCCATCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AANLSPTTISRDDREAATLIGRS*MKSITA Trigger: CGCGGTGATGGACTTCATCAAGGACCTGCCTATTAG...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS GCA 90 bp | CTTAGCAATAAATCCTGGCATGGCTGCACGGACACCAAACCTCCTTaGATGGTAATTCGAAGTAGCCAACATGCTCATGGATCCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSNKSWHGCTDTKPP*MVIRSSQHAHGSYS Trigger: GCTGTAGGATCCATGAGCATGTTGGCTACTTCGAATTACCATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CCA 90 bp | GGGCACTATAATAAGTTGTGGGCAGAGCCTCTTAGCAATAAATCCTaGCATGGCTGCACGGACACCAAACCTCCTTGCATGGTAATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GHYNKLWAEPLSNKS*HGCTDTKPPCMVIR Trigger: TCGAATTACCATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AANLSPTTISRDDREAATGHYNK*WAEPLS Trigger: GCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCC...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GCCTTTTGGTCCTTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFWSFLKPSEVCQYFSSFGHYNK*WAEPLS Trigger: GCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCC...AAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTACACTTTTGCTAACATaGTATTGGGGGCGATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTISRDDREAATVSAVTTLLLT*YWGRCL Trigger: CAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGT...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | CTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTTGCCTAATAGGCAGGTCCTaGATGAAGTCCATCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSFFNAWDGSKICKACLIGRS*MKSITA Trigger: CGCGGTGATGGACTTCATCAAGGACCTGCCTATTAG...GCAAGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | ATGGCGGCCGGAACGGTAGATGCACGAGTTTTTACTTCAAAATTCACGTTCTTCCTAATAGGCAGGTCCTaGATGAAGTCCATCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: MAAGTVDARVFTSKFTFFLIGRS*MKSITA Trigger: CGCGGTGATGGACTTCATCAAGGACCTGCCTATTAG...GAAGAACGTGAATTTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCCGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTATCCTTTCTCCATCCCTaGCCAGGTCTGTTGAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLSFLHP*PGLLNL Trigger: TAGGTTCAACAGACCTGGCAAGGGATGGAGAAAGGA...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGCAGACTGACACCTTCTaGCTCCCTAAAGCAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGQTDTF*LPKANW Trigger: CCAGTTTGCTTTAGGGAGCAAGAAGGTGTCAGTCTG...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS GCA 90 bp | AATAAGTTGTGGGCAGAGCCTCTTAGCAATAAATCCTGGCATGGCTaGACGGACACCAAACCTCCTTGCATGGTAATTCGAAGTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKLWAEPLSNKSWHG*TDTKPPCMVIRSSQ Trigger: TTGGCTACTTCGAATTACCATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS GCA 90 bp | TGCTGGGAAGGATCTGGTACTGTCCGTTTGGCTTATTCTTATCACTaGACACTTTTGCTAACATTGTATTGGGGGCGATGCCTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CWEGSGTVRLAYSYH*TLLLTLYWGRCLEV Trigger: AACCTCCAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCCTTCCCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091387.4 |
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| CDS-3UTR CAA 90 bp | CTGGAATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTCCTTCAGTTCCGGGTaGTCCCTCATTTCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEYQDIPLCCDYSLECPSSFSSG*SLISTA Trigger: AGCTGTGGAAATGAGGGACAACCCGGAACTGAAGGA...GGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATATTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGAGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKLADPQFYIWMCLDSWRGHYNK*WAEPLS Trigger: GCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCC...TCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CAA 90 bp | ATATCAGGACATTCCTCTTTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISGHSSLLRLFSRVSILAVLRPI*PFLQVL Trigger: CAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGAC...AGCAAGGATGGACACTCTAGAGAATAATCGCAGCAAAGAGGAATGTCCTGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGCGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRLFSRVSILAAFNDLSVLRPI*PFLQVL Trigger: CAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGAC...AGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCGCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CAA 90 bp | AAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTGTAAAGCTGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSLSFFNAWDGSKICKAVLRPI*PFLQVL Trigger: CAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGAC...AGCTTTACAGATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTTTCTTCAGAGTTCAGTaGGAAAGGACTTCCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTFFRVQ*ERTSLG Trigger: CCCCAAGGAAGTCCTTTCCAACTGAACTCTGAAGAA...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGAATGATGCTCCTTTGTaGGTGTTTCCTGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRNDAPL*VFPVIF Trigger: GAAGATGACAGGAAACACCAACAAAGGAGCATCATT...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CAA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGTTGAGTTCTCACTGGTaGACGGTCCATCAAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: AANLSPTTISRDDREAATLSSHW*TVHQDT Trigger: AGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAA...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
||
| CDS-3UTR CAA 90 bp | CTCTGCAGTAGAAATGGCGGCCGGAACGGTAGATGCACGAGTTTTTACTTCAAAACACTTTTGCTAACATaGTATTGGGGGCGATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LCSRNGGRNGRCTSFYFKTLLLT*YWGRCR Trigger: TCGGCATCGCCCCCAATACAATGTTAGCAAAAGTGT...TTTGAAGTAAAAACTCGTGCATCTACCGTTCCGGCCGCCATTTCTACTGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000222143.2 |
||
| CDS CCA 90 bp | CACAGCTCTATATTTGTCAAAGTTTGGGGGCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSIFVKVWGHYNKL*AEPLSNKSWHGCTD Trigger: GTCCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATATAGAGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGTTGCTGGCTGGTAATTaGAGCTTTTTGTTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRLLAGN*SFLLHH Trigger: ATGATGCAACAAAAAGCTCAAATTACCAGCCAGCAA...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTCACAGCTCTATATTaGTCAAAGTTTGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTLTALY*SKFGGT Trigger: AGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAG...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGTCTGGTACTGTCCGTTaGGCTTATTCTTATCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AANLSPTTISRDDREAATSGTVR*AYSYHC Trigger: GCAGTGATAAGAATAAGCCAAACGGACAGTACCAGA...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | CTCAGCGCACAGTTCTTGGCACAGGCTGTACTGTTCCTCTGTCTTACTTATCTCTTGCTGGCTGGTAATTaGAGCTTTTTGTTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSAQFLAQAVLFLCLTYLLLAGN*SFLLHH Trigger: ATGATGCAACAAAAAGCTCAAATTACCAGCCAGCAA...GAGATAAGTAAGACAGAGGAACAGTACAGCCTGTGCCAAGAACTGTGCGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222075.2 |
||
| CDS-3UTR CAA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWGHYNK*WAEPLS Trigger: GCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCC...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTCACAGCTCTATATTaGTCAAAGTTTGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VWDLGALFSSKLSSLSSFLTALY*SKFGGT Trigger: AGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAG...GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAAATCTTTCTCCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGATGAAGTATCTTCTTTaGTCCTCAGGCCAATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AANLSPTTISRDDREAATMKYLL*SSGQSC Trigger: GCAAGATTGGCCTGAGGACAAAAGAAGATACTTCAT...CGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGGAGAAAGATTTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GTTTGGACAGGTCCTCTGAACACAGATAATACTGTGCATCACCTTCCTGAAGGGTATCACTGCACACTTTaGCTAACATTGTATTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VWTGPLNTDNTVHHLPEGYHCTL*LTLYWG Trigger: CCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATA...CCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTTCAGAGGACCTGTCCAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | AGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCTTCTGGTACTGTCCGTTaGGCTTATTCTTATCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLTRSFTSGCVLTVGDSSGTVR*AYSYHC Trigger: GCAGTGATAAGAATAAGCCAAACGGACAGTACCAGA...AGAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAAAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGTCTGGTACTGTCCGTTaGGCTTATTCTTATCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVKLADPQFYIWMCLDSWSGTVR*AYSYHC Trigger: GCAGTGATAAGAATAAGCCAAACGGACAGTACCAGA...CCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | CAATGTCTGCAGAGGAAGCATGTGAGTAACAGGATATTTTTGAGTTCTCACTGGTCCTTTCTCCATCCCTaGCCAGGTCTGTTGAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: QCLQRKHVSNRIFLSSHWSFLHP*PGLLNL Trigger: TAGGTTCAACAGACCTGGCAAGGGATGGAGAAAGGA...CCAGTGAGAACTCAAAAATATCCTGTTACTCACATGCTTCCTCTGCAGACATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220977.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGATATCCACATGTATGTaGAAGAGGGTAAGATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRISTCM*KRVRSE Trigger: TTCTGATCTTACCCTCTTCAACATACATGTGGATAT...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | ATGGCCGATTCTAACTGCATCTGCTCACAGGACACAGAGATGCACACAGGTAGGTTGTTTTCTTCAAAGTaGAGCTCTTTGTCTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MADSNCICSQDTEMHTGRLFSSK*SSLSSF Trigger: GAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA...CCTACCTGTGTGCATCTCTGTGTCCTGTGAGCAGATGCAGTTAGAATCGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GACGGTCCATCAAGACACTCATCTACATGTTCATTAAAGGCTTCCAGACTGACAACACTTTTGCTAACATaGTATTGGGGGCGATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DGPSRHSSTCSLKASRLTTLLLT*YWGRCR Trigger: TCGGCATCGCCCCCAATACAATGTTAGCAAAAGTGT...TGTCAGTCTGGAAGCCTTTAATGAACATGTAGATGAGTGTCTTGATGGACCGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTCTTTATGTTAAGCTACTCATGGCCATAAAATaGGGATCATATTCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VHHLPEGNSHAHTLYVKLLMAIK*GSYSAS Trigger: ACTTGCTGAATATGATCCCAATTTTATGGCCATGAG...TAGCTTAACATAAAGAGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | GCCTTTTGGTCCTTCCTGAAGCCTTCTGAAGTCTGTCAGTACTTCTCGAGCTTTCTCATGGCCATAAAATaGGGATCATATTCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AFWSFLKPSEVCQYFSSFLMAIK*GSYSAS Trigger: ACTTGCTGAATATGATCCCAATTTTATGGCCATGAG...AAAGCTCGAGAAGTACTGACAGACTTCAGAAGGCTTCAGGAAGGACCAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTATGAAGTATCTTCTTTaGTCCTCAGGCCAATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGALFSSKLSSLSSFLAFMKYLL*SSGQSC Trigger: GCAAGATTGGCCTGAGGACAAAAGAAGATACTTCAT...AAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | CCCACAACAATTAGCAGAGACGACAGAGAAGCAGCTACGGTAAGTGCAGTGACTTTTGCAAGCTCAGTTTaGTCAGTTTTGTCTAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: PTTISRDDREAATVSAVTFASSV*SVLSRL Trigger: TAGTCTAGACAAAACTGACAAAACTGAGCTTGCAAA...AGTCACTGCACTTACCGTAGCTGCTTCTCTGTCGTCTCTGCTAATTGTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTAGTAACAGGATATTTTaGAGTTCTCACTGGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTSNRIF*SSHWLT Trigger: CGTCAACCAGTGAGAACTCAAAAATATCCTGTTACT...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS-3UTR CAA 90 bp | AACACAGATAATACTGTGCATCACCTTCCTGAAGGGAACAGCCATGCCCACACTGATATAGGACAAGACTaGTCTGGAATATCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: NTDNTVHHLPEGNSHAHTDIGQD*SGISGH Trigger: ATGTCCTGATATTCCAGACAAGTCTTGTCCTATATC...AGTGTGGGCATGGCTGTTCCCTTCAGGAAGGTGATGCACAGTATTATCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022172.12 |
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| CDS GCA 90 bp | AATGGGTTTATCCTTCAGTTCCGGGTTGTCCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTCAACATGAACTATGGTATTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NGFILQFRVVPHFHS*IESVHVNMNYGIVQ Trigger: TTGAACAATACCATAGTTCATGTTGACATGGACGCTTTCTATGCAGCTGTGGAAATGAGGGACAACCCGGAACTGAAGGATAAACCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTCTGGGATCTCGGGGCTTTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCTTGCTGGCTGGTAATTaGAGCTTTTTGTTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCLGSRGFVFFKVELFVFLLAGN*SFLLHH Trigger: ATGATGCAACAAAAAGCTCAAATTACCAGCCAGCAA...GAAGACAAAGAGCTCAACTTTGAAGAAAACAAAGCCCCGAGATCCCAGACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTACTACTCACAGCTCTATATTaGTCAAAGTTTGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLLSMICLPSLLDLHHLLLTALY*SKFGGT Trigger: AGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAG...TAGTAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTTCTTCAAAGTTGAGCTCTTTGTCTTCGTTCCTGGCCTTTTGGTCCTTCCTCACAGCTCTATATTaGTCAAAGTTTGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LFSSKLSSLSSFLAFWSFLTALY*SKFGGT Trigger: AGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAG...GAAGGACCAAAAGGCCAGGAACGAAGACAAAGAGCTCAACTTTGAAGAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | AAGCTTGCTGACCCGCAGTTTTACATCTGGATGTGTCTTGACAGTTGGAGATTCCTCATGGCCATAAAATaGGGATCATATTCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLADPQFYIWMCLDSWRFLMAIK*GSYSAS Trigger: ACTTGCTGAATATGATCCCAATTTTATGGCCATGAG...GAATCTCCAACTGTCAAGACACATCCAGATGTAAAACTGCGGGTCAGCAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | CGATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCATGAAGTATCTTCTTTaGTCCTCAGGCCAATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLFSRVSILAAFNDLSSVMKYLL*SSGQSC Trigger: GCAAGATTGGCCTGAGGACAAAAGAAGATACTTCAT...GACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GATTATTCTCTAGAGTGTCCATCCTTGCTGCTTTCAATGATCTGTCTTCCGTCCTTTGCTAACATTGTATaGGGGGCGATGCCGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DYSLECPSLLLSMICLPSFANIV*GAMPIF Trigger: AAAAATCGGCATCGCCCCCAATACAATGTTAGCAAA...GGACGGAAGACAGATCATTGAAAGCAGCAAGGATGGACACTCTAGAGAATAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | GATGTTTCAAAACTCTCGCTCAGCTTCTTTAATGCTTGGGATGGTTCCAAGATCTATCACTGCACACTTTaGCTAACATTGTATTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVSKLSLSFFNAWDGSKIYHCTL*LTLYWG Trigger: CCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATA...GATCTTGGAACCATCCCAAGCATTAAAGAAGCTGAGCGAGAGTTTTGAAACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTGTCAGTTTTGTCTAGACTATCCCCAGTAGATGACAAAGCTTGGTTTCCAGCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVLSRLSPVDDKAWFPAYHCTL*LTLYWG Trigger: CCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATA...AGCTGGAAACCAAGCTTTGTCATCTACTGGGGATAGTCTAGACAAAACTGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGCTTTCAATGATCTGTCTTCCGTCCCTGTTAGATCTACACCATCTACTACTCATGGCCATAAAATaGGGATCATATTCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLSMICLPSLLDLHHLLLMAIK*GSYSAS Trigger: ACTTGCTGAATATGATCCCAATTTTATGGCCATGAG...TAGTAGATGGTGTAGATCTAACAGGGACGGAAGACAGATCATTGAAAGCAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGAGTTCTCACTGGTTGACGGTCCATCAAGACACTCATCTACATGTTCATATGAAGTATCTTCTTTaGTCCTCAGGCCAATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSSHWLTVHQDTHLHVHMKYLL*SSGQSC Trigger: GCAAGATTGGCCTGAGGACAAAAGAAGATACTTCAT...ATGAACATGTAGATGAGTGTCTTGATGGACCGTCAACCAGTGAGAACTCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000220977.2 ENSMUST00000222075.2 ENSMUST00000222143.2 |
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| CDS CCA 90 bp | TCATTTCCACAGCTGCATAGAAAGCGTCCATGTCAACATGAACTATaGTATTGTTCAAATTCCGGTTCCGTTCTAACTCCATTGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SFPQLHRKRPCQHEL*YCSNSGSVLTPLQI Trigger: AATTTGCAATGGAGTTAGAACGGAACCGGAATTTGAACAATACCATAGTTCATGTTGACATGGACGCTTTCTATGCAGCTGTGGAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CCA 90 bp | TATCTCCTTAACCTCCTTACTCACAGCTCTATATTTGTCAAAGTTTaGGGGCACTATAATAAGTTGTGGGCAGAGCCTCTTAGCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLLNLLTHSSIFVKV*GHYNKLWAEPLSNK Trigger: TTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAGTAAGGAGGTTAAGGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS-3UTR CAA 90 bp | ATATCCACATGTATGTTGAAGAGGGTAAGATCAGAAGTCTCTTGTTCTAGGTTATTTGCTAACATTGTATaGGGGGCGATGCCGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISTCMLKRVRSEVSCSRLFANIV*GAMPIF Trigger: AAAAATCGGCATCGCCCCCAATACAATGTTAGCAAA...TAACCTAGAACAAGAGACTTCTGATCTTACCCTCTTCAACATACATGTGGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220977.2 ENSMUST00000222143.2 |
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| CDS CAA 90 bp | GGATCTGGTACTGTCCGTTTGGCTTATTCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGGCGATGCCTGCGCTGGCTGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSGTVRLAYSYHCTL*LTLYWGRCLRWLSA Trigger: CGCTGACAGCCAGCGCAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
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| CDS GCA 72 bp | TGGGCAGAGCCTCTTAGCAATAAATCCTGGCATGGCTaGACGGACACCAAACCTCCTTGCATGGTAATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WAEPLSNKSWHG*TDTKPPCMVIR Trigger: TCGAATTACCATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CCA 72 bp | ATGAAGTCCATCACCGCGCTCCTGCTGGGAAGGATCTaGTACTGTCCGTTTGGCTTATTCTTATCACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MKSITALLLGRI*YCPFGLFLSLH Trigger: GTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCCTTCCCAGCAGGAGCGCGGTGATGGACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS GCA 72 bp | AAATCCTGGCATGGCTGCACGGACACCAAACCTCCTTaGATGGTAATTCGAAGTAGCCAACATGCTCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: KSWHGCTDTKPP*MVIRSSQHAHG Trigger: TCCATGAGCATGTTGGCTACTTCGAATTACCATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CCA 72 bp | AATAAGTTGTGGGCAGAGCCTCTTAGCAATAAATCCTaGCATGGCTGCACGGACACCAAACCTCCTTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: NKLWAEPLSNKS*HGCTDTKPPCM Trigger: CATGCAAGGAGGTTTGGTGTCCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CAA 72 bp | GGGGGCGATGCCTGCGCTGGCTGTCAGCGTTGTTTTTaGTTCAATTCTGAAGCGAATTTCCTTTACCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GGDACAGCQRCF*FNSEANFLYHF Trigger: GAAGTGGTAAAGGAAATTCGCTTCAGAATTGAACAAAAAACAACGCTGACAGCCAGCGCAGGCATCGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
||
| CDS CAA 72 bp | ACTGTCCGTTTGGCTTATTCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGGCGATGCCTGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVRLAYSYHCTL*LTLYWGRCLRW Trigger: CCAGCGCAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
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| CDS CAA 72 bp | GGTTTCAGAGAAAAGGAGAGACAGCAACGCTCTCTGTaGGTAGAGTTCTGTGCAAGTAACAATCCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GFREKERQQRSL*VEFCASNNPES Trigger: GCTCTCGGGATTGTTACTTGCACAGAACTCTACCAACAGAGAGCGTTGCTGTCTCTCCTTTTCTCTGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222389.2 |
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| CDS GCA 72 bp | ATCCTTCAGTTCCGGGTTGTCCCTCATTTCCACAGCTaGATAGAAAGCGTCCATGTCAACATGAACTATGGT | + |
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Preference number: 6 (lower is better) Translates to: ILQFRVVPHFHS*IESVHVNMNYG Trigger: ACCATAGTTCATGTTGACATGGACGCTTTCTATGCAGCTGTGGAAATGAGGGACAACCCGGAACTGAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CAA 90 bp | ACTCACAGCTCTATATTTGTCAAAGTTTGGGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: THSSIFVKVWGHYNK*WAEPLSNKSWHGCT Trigger: CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS GCA 72 bp | GGATCTGGTACTGTCCGTTTGGCTTATTCTTATCACTaGACACTTTTGCTAACATTGTATTGGGGGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: GSGTVRLAYSYH*TLLLTLYWGRC Trigger: GCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CAA 72 bp | TTCTTCAGAGTTCAGTTGGAAAGGACTTCCTTGGGGTaGCAAATCAGGAGGACTATCTTCAAAAAGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: FFRVQLERTSLG*QIRRTIFKKQR Trigger: CCGCTGCTTTTTGAAGATAGTCCTCCTGATTTGCAACCCCAAGGAAGTCCTTTCCAACTGAACTCTGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
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| CDS CAA 72 bp | ACTGTCCGTTTGGCTTATTCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGGCGATGCCTGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TVRLAYSYHCTL*LTLYWGRCLEV Trigger: AACCTCCAGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091387.4 |
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| CDS CAA 72 bp | GGCTATTTGAGGATTGTTTTGTTCTTCAGAGTTCAGTaGGAAAGGACTTCCTTGGGGTTGCAAATCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GYLRIVLFFRVQ*ERTSLGLQIRR Trigger: CCTCCTGATTTGCAACCCCAAGGAAGTCCTTTCCAACTGAACTCTGAAGAACAAAACAATCCTCAAATAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022172.12 ENSMUST00000221645.2 |
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| CDS CAA 90 bp | GTTTCCCATCTTGATGAAGTATCTTCTTTTGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTGTGTTATATTCAAGTAGGCTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: VSHLDEVSSFVLRPI*PFLQVLCYIQVGFV Trigger: GACGAAGCCTACTTGAATATAACACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGACAAAAGAAGATACTTCATCAAGATGGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CCA 72 bp | CAGCTGCATAGAAAGCGTCCATGTCAACATGAACTATaGTATTGTTCAAATTCCGGTTCCGTTCTAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: QLHRKRPCQHEL*YCSNSGSVLTP Trigger: TGGAGTTAGAACGGAACCGGAATTTGAACAATACCATAGTTCATGTTGACATGGACGCTTTCTATGCAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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| CDS CCA 72 bp | ATATTTGTCAAAGTTTGGGGGCACTATAATAAGTTGTaGGCAGAGCCTCTTAGCAATAAATCCTGGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: IFVKVWGHYNKL*AEPLSNKSWHG Trigger: GCCATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CCA 72 bp | AACCTCCTTACTCACAGCTCTATATTTGTCAAAGTTTaGGGGCACTATAATAAGTTGTGGGCAGAGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NLLTHSSIFVKV*GHYNKLWAEPL Trigger: AAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATATAGAGCTGTGAGTAAGGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CAA 90 bp | GGATCTGGTACTGTCCGTTTGGCTTATTCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGGCGATGCCGATTTTTAAGTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSGTVRLAYSYHCTL*LTLYWGRCRFLSSF Trigger: GAAACTACTTAAAAATCGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGTACCAGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000220977.2 ENSMUST00000221899.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS TCA 72 bp | ACAGGCTGTACTGTTCCTCTGTCTTACTTATCTCACTaGATGTCCTTTCAACACTCATGCTTTTCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TGCTVPLSYLSH*MSFQHSCFSFL Trigger: GAGAAAGGAAAAGCATGAGTGTTGAAAGGACATTCAGTGAGATAAGTAAGACAGAGGAACAGTACAGCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222389.2 |
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| CDS CAA 72 bp | ACTGTCCGTTTGGCTTATTCTTATCACTGCACACTTTaGCTAACATTGTATTGGGGGCGATGCCGATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TVRLAYSYHCTL*LTLYWGRCRFL Trigger: TAAAAATCGGCATCGCCCCCAATACAATGTTAGCAAAAGTGTGCAGTGATAAGAATAAGCCAAACGGACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000220977.2 ENSMUST00000221899.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CAA 72 bp | TCTATATTTGTCAAAGTTTGGGGGCACTATAATAAGTaGTGGGCAGAGCCTCTTAGCAATAAATCCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SIFVKVWGHYNK*WAEPLSNKSWH Trigger: ATGCCAGGATTTATTGCTAAGAGGCTCTGCCCACAACTTATTATAGTGCCCCCAAACTTTGACAAATATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CAA 72 bp | CTTGATGAAGTATCTTCTTTTGTCCTCAGGCCAATCTaGCCTTTCCTGCAAGTGCTGTGTTATATTCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LDEVSSFVLRPI*PFLQVLCYIQV Trigger: TACTTGAATATAACACAGCACTTGCAGGAAAGGCAAGATTGGCCTGAGGACAAAAGAAGATACTTCATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 |
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| CDS CAA 72 bp | TGGTATTGTTCAAATTCCGGTTCCGTTCTAACTCCATaGCAAATTTGTCAACCTGTAATTGAGCTTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: WYCSNSGSVLTP*QICQPVIELSL Trigger: TAAGGAAAGCTCAATTACAGGTTGACAAATTTGCAATGGAGTTAGAACGGAACCGGAATTTGAACAATACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000022172.12 ENSMUST00000091387.4 ENSMUST00000220977.2 ENSMUST00000221645.2 ENSMUST00000221899.2 ENSMUST00000222075.2 ENSMUST00000222143.2 ENSMUST00000222389.2 ENSMUST00000223475.2 |
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