Pregenerated sensors for POLH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023953Ensembl transcript IDs: ENSMUST00000024749.9, ENSMUST00000233438.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCCTGTaGAGGGTCAGGAGCCGCAGAGTTACTAAGCTGTGTGTGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TLCWQTAWLRCRAGL*RVRSRRVTKLCVLE Trigger: CTCCAGCACACACAGCTTAGTAACTCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | TCCATCATCAGGACCACTGTCTACACACTCTGCTGGCAGACAGCTTaGTTGCGCTGCAGGGCTGGCCTGTGGAGGGTCAGGAGCCGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SIIRTTVYTLCWQTA*LRCRAGLWRVRSRR Trigger: TCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR GCA 90 bp | TACTGGCTTCACCGCTCCATCATCAGGACCACTGTCTACACACTCTaGTGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCCTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YWLHRSIIRTTVYTL*WQTAWLRCRAGLWR Trigger: CCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATGATGGAGCGGTGAAGCCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | CTGGAACCAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTaGCCCTTTGGGTCACCTCCTGAGAGTTGTAAGCTGGAGAATCGA | + |
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Preference number: 1 (lower is better) Translates to: LEPGSHTSHRALGPQ*PFGSPPESCKLENR Trigger: TCGATTCTCCAGCTTACAACTCTCAGGAGGTGACCCAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR TCA 90 bp | CTAGCTTTCCTCCAAGACTTCGGATTTTACGGATTGGCATCTGGCTaGAGAGCTGTGGCACTGACCCATGTGAGACCAGGGTTTGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: LAFLQDFGFYGLASG*RAVALTHVRPGFGG Trigger: ACCGCCAAACCCTGGTCTCACATGGGTCAGTGCCACAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGAAGTCTTGGAGGAAAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR GCA 90 bp | CTCTCCTCAAGTTCCAGAGCTAACTGCAAAAGCCACCACTGTACCTaGTCCCGAGTAGCCAGAGCTGTTTTCCCTGGGAAGTTCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LSSSSRANCKSHHCT*SRVARAVFPGKFLL Trigger: CAGCAAGAACTTCCCAGGGAAAACAGCTCTGGCTACTCGGGAGCAGGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGAACTTGAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | ATCTGGCTGAAGAGCTGTGGCACTGACCCATGTGAGACCAGGGTTTaGCGGTTGGGCTTATTTAGTCCACAAGCAAGTTTTGCCAGGACC | + |
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Preference number: 1 (lower is better) Translates to: IWLKSCGTDPCETRV*RLGLFSPQASFART Trigger: GGTCCTGGCAAAACTTGCTTGTGGACTAAATAAGCCCAACCGCCAAACCCTGGTCTCACATGGGTCAGTGCCACAGCTCTTCAGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | CTCCAATGCAAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTaGAACCAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: LQCKMVVRVFWHVPH*NQGVTLLTEHLVLS Trigger: ACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR TCA 90 bp | GAGGAGGGGACCACTCAGTTTGGATTCCAGATGTATTACAGTTCCTaGTGGCAGCAAATGCGTCCTGGCTCATCTTGTGAGCGTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: EEGTTQFGFQMYYSS*WQQMRPGSSCERHS Trigger: GCTATGACGCTCACAAGATGAGCCAGGACGCATTTGCTGCCATCAGGAACTGTAATACATCTGGAATCCAAACTGAGTGGTCCCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR GCA 90 bp | GAGCACGTTTGGACTGTCCCCAGCCACATTCATTTCTGTAGACACTaGTTTAGAGGATACTGGCTTCACCGCTCCATCATCAGGACCACT | + |
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Preference number: 1 (lower is better) Translates to: EHVWTVPSHIHFCRH*FRGYWLHRSIIRTT Trigger: AGTGGTCCTGATGATGGAGCGGTGAAGCCAGTATCCTCTAAAGCAGTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCAAACGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | GTCCCCAGCCACATTCATTTCTGTAGACACTGCTTTAGAGGATACTaGCTTCACCGCTCCATCATCAGGACCACTGTCTACACACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VPSHIHFCRHCFRGY*LHRSIIRTTVYTLC Trigger: GCAGAGTGTGTAGACAGTGGTCCTGATGATGGAGCGGTGAAGCCAGTATCCTCTAAAGCAGTGTCTACAGAAATGAATGTGGCTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR TCA 90 bp | AGCTGTGTGTGCTGGAGCAGCAGGCTCTTCTGCTTAAAGAAAGACTaGCTTCCTGTGGTTTGGCTGCTTTGGAACACAAGTGAAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SCVCWSSRLFCLKKD*LPVVWLLWNTSEGL Trigger: CAAGCCTTCACTTGTGTTCCAAAGCAGCCAAACCACAGGAAGTCAGTCTTTCTTTAAGCAGAAGAGCCTGCTGCTCCAGCACACACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR GCA 90 bp | TCATTTCGATCTTTGGTTAGCCTCTCCTCAAGTTCCAGAGCTAACTaGAAAAGCCACCACTGTACCTGCTCCCGAGTAGCCAGAGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: SFRSLVSLSSSSRAN*KSHHCTCSRVARAV Trigger: AACAGCTCTGGCTACTCGGGAGCAGGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGAACTTGAGGAGAGGCTAACCAAAGATCGAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | TTGGGTCACCTCCTGAGAGTTGTAAGCTGGAGAATCGAGCACGTTTaGACTGTCCCCAGCCACATTCATTTCTGTAGACACTGCTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: LGHLLRVVSWRIEHV*TVPSHIHFCRHCFR Trigger: TCTAAAGCAGTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCAAACGTGCTCGATTCTCCAGCTTACAACTCTCAGGAGGTGACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR GCA 90 bp | GTTTTCCCTGGGAAGTTCTTGCTGCAGCCAATAGTTTTAGGTAACTaGCTGGGTTTAACTGGATCGTGTTCAATACCTCGACACATGGCA | + |
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Preference number: 1 (lower is better) Translates to: VFPGKFLLQPIVLGN*LGLTGSCSIPRHMA Trigger: TGCCATGTGTCGAGGTATTGAACACGATCCAGTTAAACCCAGGCAGTTACCTAAAACTATTGGCTGCAGCAAGAACTTCCCAGGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 90 bp | GCAAGTTTTGCCAGGACCTTATTGTGTGAGATTCCAGCTGAACACTaGAAGCCAGTCTTACTCTCTATGGCTGCTCTCATTTCTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: ASFARTLLCEIPAEH*KPVLLSMAALISST Trigger: TGTGGAAGAAATGAGAGCAGCCATAGAGAGTAAGACTGGCTTCCAGTGTTCAGCTGGAATCTCACACAATAAGGTCCTGGCAAAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR TCA 90 bp | TACATAATTCAAAGTCATGTAATTTATCAGAAAAGCCTGCATGGCTaGAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCC | + |
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Preference number: 1 (lower is better) Translates to: YIIQSHVIYQKSLHG*KRLLNPLLWPFALA Trigger: GGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATTACATGACTTTGAATTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR CCA 90 bp | TTCATACATAATTCAAAGTCATGTAATTTATCAGAAAAGCCTGCATaGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACT | + |
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Preference number: 1 (lower is better) Translates to: FIHNSKSCNLSEKPA*LKKTAKSITLAVCT Trigger: AGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATTACATGACTTTGAATTATGTATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR CAA 90 bp | CTCCATCATCAGGACCACTGTCTACACACTCTGCTGGCAGACAGCTaGGTTGCGCTGCAGGGCTGGCCTGTGGAGGGTCAGGAGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHHQDHCLHTLLADS*VALQGWPVEGQEPQ Trigger: CTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATGATGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CAA 90 bp | ATCATCAGGACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTaGCGCTGCAGGGCTGGCCTGTGGAGGGTCAGGAGCCGCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: IIRTTVYTLCWQTAW*RCRAGLWRVRSRRV Trigger: AACTCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCAAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTGGAACCAGGGTGCAGGGCTGGCCTGTaGAGGGTCAGGAGCCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PMQNGSPCVLACPTLEPGCRAGL*RVRSRR Trigger: TCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCA...CCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CAA 90 bp | AACGCAGTGATATCCGTGCAAGCTGGAGGGGCAGCCGCAGAGAACTaGGTAGCGCAGAGGAAGAGCATTGTGAGAGGAGGGGACCACTCA | + |
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Preference number: 2 (lower is better) Translates to: NAVISVQAGGAAAEN*VAQRKSIVRGGDHS Trigger: TGAGTGGTCCCCTCCTCTCACAATGCTCTTCCTCTGCGCTACCAAGTTCTCTGCGGCTGCCCCTCCAGCTTGCACGGATATCACTGCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCAAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTGGAACCAGGGGCTGGGCCAGACCCCTaGGTCCTAGTCTCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PMQNGSPCVLACPTLEPGAGPDP*VLVSEL Trigger: CAGCTCTGAGACTAGGACCCAGGGGTCTGGCCCAGC...CCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCTCGGATTTTACGGATTaGCATCTGGCTGAAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TTVYTLCWQTAWLRCRAGSDFTD*HLAEEL Trigger: CAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGA...GCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAACCAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTGGCCCTTTGCTAAGCTGTGTGTGCTaGAGCAGCAGGCTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: WNQGVTLLTEHLVLSGPLLSCVC*SSRLFC Trigger: GCAGAAGAGCCTGCTGCTCCAGCACACACAGCTTAG...CAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CAA 90 bp | CAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTGGCCCTTaGGGTCACCTCCTGAGAGTTGTAAGCTGGAGAATCGAGCACGTT | + |
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Preference number: 2 (lower is better) Translates to: QGVTLLTEHLVLSGP*GHLLRVVSWRIEHV Trigger: AACGTGCTCGATTCTCCAGCTTACAACTCTCAGGAGGTGACCCAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAATCGAGCACGTTTGGACTGTCCCCAGCCACATTCATTTCTGTAGACACTCTCCCACAGTCAGCCTaGGGTCTGGAGAGGTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GESSTFGLSPATFISVDTLPQSA*GLERWD Trigger: ATCCCACCTCTCCAGACCTCAGGCTGACTGTGGGAG...AGTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCAAACGTGCTCGATTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTTGGGATTCAGTGAACTaGGTCAGGTCACCCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: RTTVYTLCWQTAWLRCRAWDSVN*VRSPMY Trigger: ATACATGGGTGACCTGACCCAGTTCACTGAATCCCA...AGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTTGCTTAAAGAAAGACTaGCTTCCTGTGGTTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RTTVYTLCWQTAWLRCRACLKKD*LPVVWL Trigger: CAGCCAAACCACAGGAAGTCAGTCTTTCTTTAAGCA...AGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAGGACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGTGTGAGACCAGGGTTTaGCGGTTGGGCTTATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HQDHCLHTLLADSLVALQCETRV*RLGLFS Trigger: ACTAAATAAGCCCAACCGCCAAACCCTGGTCTCACA...CTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGCTAACTGCAAAAGCCACCACTGTACCTGCTCCCGAGTAGCCAGAGCTTTACGGATTGGCATCTaGCTGAAGAGCTGTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: SRANCKSHHCTCSRVARALRIGI*LKSCGT Trigger: AGTGCCACAGCTCTTCAGCCAGATGCCAATCCGTAA...AGCTCTGGCTACTCGGGAGCAGGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCATAGTTTTAGGTAACTaGCTGGGTTTAACTGGATCG | + |
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Preference number: 2 (lower is better) Translates to: TTVYTLCWQTAWLRCRAGIVLGN*LGLTGS Trigger: CGATCCAGTTAAACCCAGGCAGTTACCTAAAACTAT...GCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGATTCAGTGAACTGGGTCAGGTCACCCATGTATTCTATCCCAAGGACTAGTCAGCCTGAGGTCTaGAGAGGTGGGATCATCACT | + |
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Preference number: 2 (lower is better) Translates to: SWDSVNWVRSPMYSIPRTSQPEV*RGGIIT Trigger: AGTGATGATCCCACCTCTCCAGACCTCAGGCTGACT...AGTCCTTGGGATAGAATACATGGGTGACCTGACCCAGTTCACTGAATCCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCAAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTGGAACCAGGGGTGGTTTGGCTGCTTTaGAACACAAGTGAAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PMQNGSPCVLACPTLEPGVVWLL*NTSEGL Trigger: CAAGCCTTCACTTGTGTTCCAAAGCAGCCAAACCAC...CCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CAA 90 bp | TGTACCTGCTCCCGAGTAGCCAGAGCTGTTTTCCCTGGGAAGTTCTaGCTGCAGCCAATAGTTTTAGGTAACTGCCTGGGTTTAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: CTCSRVARAVFPGKF*LQPIVLGNCLGLTG Trigger: TCCAGTTAAACCCAGGCAGTTACCTAAAACTATTGGCTGCAGCAAGAACTTCCCAGGGAAAACAGCTCTGGCTACTCGGGAGCAGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAACCAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTGGCCCTTTGACACAAGTGAAGGCTTaGATGATAACTTCTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: WNQGVTLLTEHLVLSGPLTQVKA*MITSLW Trigger: CCACAGAGAAGTTATCATCCAAGCCTTCACTTGTGT...CAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCGTGAACATGGGGCCTTaGACATGCCGTCCTAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PAWLKKTAKSITLAVCTCVNMGP*TCRPRQ Trigger: TTGTCTAGGACGGCATGTGCAAGGCCCCATGTTCAC...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGCTCTTCTGCTTAAAGAAAGACTGACTTCCTGTGGTTTGGCTGCTTTGCTCAGAGCTGGCAATTaGCACCTTTGGCTGACAACT | + |
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Preference number: 2 (lower is better) Translates to: QQALLLKERLTSCGLAALLRAGN*HLWLTT Trigger: AGTTGTCAGCCAAAGGTGCCAATTGCCAGCTCTGAG...CAAAGCAGCCAAACCACAGGAAGTCAGTCTTTCTTTAAGCAGAAGAGCCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCTTTTCCTTCCAGAACTaGGAAGTGAACATGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PAWLKKTAKSITLAVCTCFSFQN*EVNMGP Trigger: AGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAA...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCAGAGAGGAAAAGCATTaGTCAGCAACAGGATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PAWLKKTAKSITLAVCTCREEKH*SATGSE Trigger: CTCTGATCCTGTTGCTGATCAATGCTTTTCCTCTCT...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR-3UTR TCA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACTCTTTATACCTTTTATaGCACTCTGTCTCCCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LIVLVFLPELGSEHGALHSLYLL*HSVSLE Trigger: CTCTAGGGAGACAGAGTGTCATAAAAGGTATAAAGA...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAATGTCATATTCCCCTTaGGCAGTCAACATGATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLRNYISSQGRSYTLKSMSYSP*AVNMIP Trigger: TGGAATCATGTTGACTGCTCAAGGGGAATATGACAT...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR CAA 90 bp | AACCAACATCAAGAACATATTCCATGTAAGTCACTGCAAGAGTTCTaGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACA | + |
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Preference number: 2 (lower is better) Translates to: NQHQEHIPCKSLQEF*LLRNYISSQGRSYT Trigger: TGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAAGAACTCTTGCAGTGACTTACATGGAATATGTTCTTGATGTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCATTTATCAGAAAAGCCTaGATGGCTGAAAAAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: LLLRNYISSQGRSYTLKSFIRKA*MAEKDC Trigger: GCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAA...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR GCA 72 bp | GTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTaGAGGGCTGGCCTGTGGAGGGTCAGGAGCCGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VYTLCWQTAWLR*RAGLWRVRSRR Trigger: TCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 72 bp | TGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCCTGTaGAGGGTCAGGAGCCGCAGAGTTACTAAGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: WQTAWLRCRAGL*RVRSRRVTKLC Trigger: ACACAGCTTAGTAACTCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| 3UTR CCA 72 bp | CGCTCCATCATCAGGACCACTGTCTACACACTCTGCTaGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSIIRTTVYTLC*QTAWLRCRAGL Trigger: CAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTGATGATGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTAAGGCGCTTACTACTGGAAGCCGAGGGACTCTTGGGATTTCTTTTGCCTGGCAGACAGCTTGGTaGCGCTGCAGGGCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPKALTTGSRGTLGISFAWQTAW*RCRAGL Trigger: CAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCA...GGCAAAAGAAATCCCAAGAGTCCCTCGGCTTCCAGTAGTAAGCGCCTTAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR TCA 72 bp | TTGGCTGACAACTTGAGTCGCTACTCAGGAACGCAGTaGTATCCGTGCAAGCTGGAGGGGCAGCCGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LADNLSRYSGTQ*YPCKLEGQPQR Trigger: TCTCTGCGGCTGCCCCTCCAGCTTGCACGGATATCACTGCGTTCCTGAGTAGCGACTCAAGTTGTCAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | GCCTCTTTAGAGGTTGGTACAGCTGGGCCAGACCCCTaGGTCCTAGTCTCAGAGCTGGCAATTGGCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASLEVGTAGPDP*VLVSELAIGTF Trigger: AAAGGTGCCAATTGCCAGCTCTGAGACTAGGACCCAGGGGTCTGGCCCAGCTGTACCAACCTCTAAAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR GCA 72 bp | TTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACATaGCGTCCTAGACAAGTGAGCTCTATCTCCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FQNWEVNMGPCT*RPRQVSSISSP Trigger: GGGGCTGGAGATAGAGCTCACTTGTCTAGGACGGCATGTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR CCA 72 bp | GGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTaGCCCTTTGGGTCACCTCCTGAGAGTTGTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSHTSHRALGPQ*PFGSPPESCKL Trigger: CAGCTTACAACTCTCAGGAGGTGACCCAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTAAGGCGCTTACTACTGGAAGCCGAGGGACTCTTGGGATTTCTTTTGCCTCTCAGAGCTGGCAATaGGCACCTTTGGCTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPKALTTGSRGTLGISFASQSWQ*APLADN Trigger: GTTGTCAGCCAAAGGTGCCAATTGCCAGCTCTGAGA...GGCAAAAGAAATCCCAAGAGTCCCTCGGCTTCCAGTAGTAAGCGCCTTAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR TCA 72 bp | CTCCAAGACTTCGGATTTTACGGATTGGCATCTGGCTaGAGAGCTGTGGCACTGACCCATGTGAGACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQDFGFYGLASG*RAVALTHVRPG Trigger: CCCTGGTCTCACATGGGTCAGTGCCACAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGAAGTCTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR GCA 72 bp | AGTTCCAGAGCTAACTGCAAAAGCCACCACTGTACCTaGTCCCGAGTAGCCAGAGCTGTTTTCCCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSRANCKSHHCT*SRVARAVFPGK Trigger: CTTCCCAGGGAAAACAGCTCTGGCTACTCGGGAGCAGGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACCAGGGAGTCACACTTCTCACAGAGCACTTGGTCCTCAGTGGCCCTTTGCTGACTTCCTGTGGTTaGGCTGCTTTGGAACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: WNQGVTLLTEHLVLSGPLLTSCG*AALEHK Trigger: CTTGTGTTCCAAAGCAGCCAAACCACAGGAAGTCAG...CAAAGGGCCACTGAGGACCAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR GCA 72 bp | TCTTTGGTTAGCCTCTCCTCAAGTTCCAGAGCTAACTaGAAAAGCCACCACTGTACCTGCTCCCGAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLVSLSSSSRAN*KSHHCTCSRVA Trigger: GGCTACTCGGGAGCAGGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGAACTTGAGGAGAGGCTAACCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGCAAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTGGAACCAGGGACCAGGGTTTGGCGGTaGGGCTTATTTAGTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PMQNGSPCVLACPTLEPGTRVWR*GLFSPQ Trigger: TTGTGGACTAAATAAGCCCAACCGCCAAACCCTGGT...CCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR GCA 72 bp | TTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTaGACATGCCGTCCTAGACAAGTGAGCTCTATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSFQNWEVNMGP*TCRPRQVSSIS Trigger: GGAGATAGAGCTCACTTGTCTAGGACGGCATGTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR CCA 72 bp | TTTCCTCCAAGACTTCGGATTTTACGGATTGGCATCTaGCTGAAGAGCTGTGGCACTGACCCATGTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: FPPRLRILRIGI*LKSCGTDPCET Trigger: GGTCTCACATGGGTCAGTGCCACAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGAAGTCTTGGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | AAAATGGTAGTCCGTGTGTTCTGGCATGTCCCACACTaGAACCAGGGAGTCACACTTCTCACAGAGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KMVVRVFWHVPH*NQGVTLLTEHL Trigger: CAAGTGCTCTGTGAGAAGTGTGACTCCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | CTGCAACTCCAATGCAAAATGGTAGTCCGTGTGTTCTaGCATGTCCCACACTGGAACCAGGGAGTCACACTT | + |
|
Preference number: 3 (lower is better) Translates to: LQLQCKMVVRVF*HVPHWNQGVTL Trigger: AAGTGTGACTCCCTGGTTCCAGTGTGGGACATGCCAGAACACACGGACTACCATTTTGCATTGGAGTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR TCA 72 bp | CTTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTaGACATGGGGCCTTGCACATGCCGTCCTAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNSPRFPSRTGK*TWGLAHAVLDK Trigger: CTTGTCTAGGACGGCATGTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR GCA 72 bp | TGGACTGTCCCCAGCCACATTCATTTCTGTAGACACTaGTTTAGAGGATACTGGCTTCACCGCTCCATCATC | + |
|
Preference number: 3 (lower is better) Translates to: WTVPSHIHFCRH*FRGYWLHRSII Trigger: GATGATGGAGCGGTGAAGCCAGTATCCTCTAAAGCAGTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | AAGAGCTGTGGCACTGACCCATGTGAGACCAGGGTTTaGCGGTTGGGCTTATTTAGTCCACAAGCAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSCGTDPCETRV*RLGLFSPQASF Trigger: AAAACTTGCTTGTGGACTAAATAAGCCCAACCGCCAAACCCTGGTCTCACATGGGTCAGTGCCACAGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | GCTGAGTGGCCACGCGGTCATTATCATTTCGATCTTTaGTTAGCCTCTCCTCAAGTTCCAGAGCTAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AEWPRGHYHFDL*LASPQVPELTA Trigger: TGCAGTTAGCTCTGGAACTTGAGGAGAGGCTAACCAAAGATCGAAATGATAATGACCGCGTGGCCACTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | CTCCTGAGAGTTGTAAGCTGGAGAATCGAGCACGTTTaGACTGTCCCCAGCCACATTCATTTCTGTAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: LLRVVSWRIEHV*TVPSHIHFCRH Trigger: GTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCAAACGTGCTCGATTCTCCAGCTTACAACTCTCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR TCA 72 bp | ACCACTCAGTTTGGATTCCAGATGTATTACAGTTCCTaGTGGCAGCAAATGCGTCCTGGCTCATCTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTQFGFQMYYSS*WQQMRPGSSCE Trigger: CTCACAAGATGAGCCAGGACGCATTTGCTGCCATCAGGAACTGTAATACATCTGGAATCCAAACTGAGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CCA 72 bp | CACATTCATTTCTGTAGACACTGCTTTAGAGGATACTaGCTTCACCGCTCCATCATCAGGACCACTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HIHFCRHCFRGY*LHRSIIRTTVY Trigger: GTAGACAGTGGTCCTGATGATGGAGCGGTGAAGCCAGTATCCTCTAAAGCAGTGTCTACAGAAATGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR GCA 72 bp | GGGAAGTTCTTGCTGCAGCCAATAGTTTTAGGTAACTaGCTGGGTTTAACTGGATCGTGTTCAATACCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: GKFLLQPIVLGN*LGLTGSCSIPR Trigger: TCGAGGTATTGAACACGATCCAGTTAAACCCAGGCAGTTACCTAAAACTATTGGCTGCAGCAAGAACTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGCAGCCAATAGTTTTAGGTAACTGCCTGGGTTTAACTGGATCGTGTTCATTTGCCAGGACCTTATaGTGTGAGATTCCAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLQPIVLGNCLGLTGSCSFARTL*CEIPAE Trigger: TTCAGCTGGAATCTCACACAATAAGGTCCTGGCAAA...TGAACACGATCCAGTTAAACCCAGGCAGTTACCTAAAACTATTGGCTGCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR TCA 72 bp | TTTATGACACTCTGTCTCCCTAGAGAGGAAAAGCATTaGTCAGCAACAGGATCAGAGTCCCATTGGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FMTLCLPREEKH*SATGSESHWKK Trigger: TTTCTTCCAATGGGACTCTGATCCTGTTGCTGATCAATGCTTTTCCTCTCTAGGGAGACAGAGTGTCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR TCA 72 bp | AAGCAAGTGAGCTTGCCAGGTTCTTTATACCTTTTATaGCACTCTGTCTCCCTAGAGAGGAAAAGCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: KQVSLPGSLYLL*HSVSLERKSID Trigger: ATCAATGCTTTTCCTCTCTAGGGAGACAGAGTGTCATAAAAGGTATAAAGAACCTGGCAAGCTCACTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGGGAAGCAAGTGAGCTaGCCAGGTTCTTTATACCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLSEKPAWLKKTAKSITLGKQVS*PGSLYL Trigger: AAGGTATAAAGAACCTGGCAAGCTCACTTGCTTCCC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR TCA 72 bp | CAAAGTCATGTAATTTATCAGAAAAGCCTGCATGGCTaGAAAAGACTGCTAAATCCATTACTTTGGCCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QSHVIYQKSLHG*KRLLNPLLWPF Trigger: AAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATTACATGACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR CCA 72 bp | AATTCAAAGTCATGTAATTTATCAGAAAAGCCTGCATaGCTGAAAAAGACTGCTAAATCCATTACTTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NSKSCNLSEKPA*LKKTAKSITLA Trigger: GGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATTACATGACTTTGAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| 3UTR CAA 72 bp | CAGGACCACTGTCTACACACTCTGCTGGCAGACAGCTaGGTTGCGCTGCAGGGCTGGCCTGTGGAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDHCLHTLLADS*VALQGWPVEGQ Trigger: CTGACCCTCCACAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| 3UTR CAA 72 bp | ATATCCGTGCAAGCTGGAGGGGCAGCCGCAGAGAACTaGGTAGCGCAGAGGAAGAGCATTGTGAGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVQAGGAAAEN*VAQRKSIVRGG Trigger: CCCTCCTCTCACAATGCTCTTCCTCTGCGCTACCAAGTTCTCTGCGGCTGCCCCTCCAGCTTGCACGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| CDS-3UTR CCA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACGTTGCGCTGCAGGGCTaGCCTGTGGAGGGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLVFLPELGSEHGALHVALQG*PVEGQE Trigger: CTCCTGACCCTCCACAGGCCAGCCCTGCAGCGCAAC...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCAGAGGAAGAGCATTGTaGGAGGAGGGGACCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCRGRAL*EEGTTQ Trigger: CTGAGTGGTCCCCTCCTCTCACAATGCTCTTCCTCT...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCGTCTACACACTCTGCTaGCAGACAGCTTGGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCVYTLC*QTAWLR Trigger: GCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGAC...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCAGTCAGCCTGAGGTCTaGAGAGGTGGGATCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCSQPEV*RGGIIT Trigger: AGTGATGATCCCACCTCTCCAGACCTCAGGCTGACT...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACCCAGGGTTTGGCGGTTaGGCTTATTTAGTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLVFLPELGSEHGALHPGFGG*AYLVHK Trigger: CTTGTGGACTAAATAAGCCCAACCGCCAAACCCTGG...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCATGCAGGGCTGGCCTGTaGAGGGTCAGGAGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSCRAGL*RVRSRR Trigger: TCTGCGGCTCCTGACCCTCCACAGGCCAGCCCTGCA...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAATCGAGCACGTTTGGACTGTCCCCAGCCACATTCATTTCTGTAGACACTTCCACCACCTTTCCATaGTTTGTACTGTACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GESSTFGLSPATFISVDTSTTFP*FVLYNC Trigger: GCAGTTGTACAGTACAAATCATGGAAAGGTGGTGGA...AGTGTCTACAGAAATGAATGTGGCTGGGGACAGTCCAAACGTGCTCGATTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
||
| CDS-3UTR TCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCGGAGCTGGGATTCAGTaGACTGGGTCAGGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISGAGIQ*TGSGHP Trigger: TGGGTGACCTGACCCAGTTCACTGAATCCCAGCTCC...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCTTACTAAGCTGTGTGTaGTGGAGCAGCAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCLLSCV*WSSRLF Trigger: GAAGAGCCTGCTGCTCCAGCACACACAGCTTAGTAA...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCGATATCCGTGCAAGCTaGAGGGGCAGCCGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISDIRAS*RGSRRE Trigger: TTCTCTGCGGCTGCCCCTCCAGCTTGCACGGATATC...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCGCACTTGGTCCTCAGTaGCCCTTTGGGTCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISALGPQ*PFGSPP Trigger: AGGAGGTGACCCAAAGGGCCACTGAGGACCAAGTGC...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTTGGCATGTCCCACACTaGAACCAGGGAGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKKTAKSITLAVCTCPSWHVPH*NQGVTL Trigger: AAGTGTGACTCCCTGGTTCCAGTGTGGGACATGCCA...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR TCA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACTGCTTAAAGAAAGACTaGCTTCCTGTGGTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLVFLPELGSEHGALHCLKKD*LPVVWL Trigger: CAGCCAAACCACAGGAAGTCAGTCTTTCTTTAAGCA...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCTGTGAGACCAGGGTTTaGCGGTTGGGCTTATTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCCETRV*RLGLFS Trigger: ACTAAATAAGCCCAACCGCCAAACCCTGGTCTCACA...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACGGGGACCACTCAGTTTaGATTCCAGATGTATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLVFLPELGSEHGALHGDHSV*IPDVLQ Trigger: CTGTAATACATCTGGAATCCAAACTGAGTGGTCCCC...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCTGGGCCAGACCCCTaGGTCCTAGTCTCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLAGPDP*VLVSEL Trigger: CAGCTCTGAGACTAGGACCCAGGGGTCTGGCCCAGC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTAAGCCGAGGGACTCTTaGGATTTCTTTTGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLKKTAKSITLAVCTCPSKPRDS*DFFCPE Trigger: CTCAGGGCAAAAGAAATCCCAAGAGTCCCTCGGCTT...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR CAA 72 bp | CCTGTGGTTTGGCTGCTTTGGAACACAAGTGAAGGCTaGGATGATAACTTCTCTGTGGCTGTGTTAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVVWLLWNTSEG*DDNFSVAVLRG Trigger: ACCTCTTAACACAGCCACAGAGAAGTTATCATCCAAGCCTTCACTTGTGTTCCAAAGCAGCCAAACCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| CDS-3UTR TCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGCTCCCACAGTCAGCCTaGGGTCTGGAGAGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLLPQSA*GLERWD Trigger: ATCCCACCTCTCCAGACCTCAGGCTGACTGTGGGAG...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCAAGACTTCGGATTTTACGGATTGGCATCTGGCTGAAGAGCTGTGGCGGCTTCATAGCTAACTaGAATAATTCCACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPPRLRILRIGIWLKSCGGFIAN*NNSTTF Trigger: AAAGGTGGTGGAATTATTGCAGTTAGCTATGAAGCC...GCCACAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGAAGTCTTGGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTTCGGATTTTACGGATTaGCATCTGGCTGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLKKTAKSITLAVCTCPSSDFTD*HLAEEL Trigger: CAGCTCTTCAGCCAGATGCCAATCCGTAAAATCCGA...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR TCA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTTCCACCACCTTTCCATaGTTTGTACTGTACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKKTAKSITLAVCTCPSSTTFP*FVLYNC Trigger: GCAGTTGTACAGTACAAATCATGGAAAGGTGGTGGA...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR TCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCGAATAGCCTCTTTCTaGACAGTCTCTTCTACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCRIASF*TVSSTV Trigger: TACAGTAGAAGAGACTGTTCAGAAAGAGGCTATTCG...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCTCTTGGGATTTCTTTTaGCCTGAGGAGACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISSWDFF*PEETRQ Trigger: CTGCCGTGTCTCCTCAGGGCAAAAGAAATCCCAAGA...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCACACAAGTGAAGGCTTaGATGATAACTTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAWLKKTAKSITLAVCTCTQVKA*MITSLW Trigger: CCACAGAGAAGTTATCATCCAAGCCTTCACTTGTGT...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTAAGACTGACTTCCTGTaGTTTGGCTGCTTTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WLKKTAKSITLAVCTCPSKTDFL*FGCFGT Trigger: TGTTCCAAAGCAGCCAAACCACAGGAAGTCAGTCTT...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCAGTTCCAGAGCTAACTaGAAAAGCCACCACTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISSSRAN*KSHHCT Trigger: GGTACAGTGGTGGCTTTTGCAGTTAGCTCTGGAACT...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGAACGATTCCAGCGTCTaGATGCCATGGGGCCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLNDSSV*MPWGLR Trigger: CCTTAGGCCCCATGGCATGCAGACGCTGGAATCGTT...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCCTGCCTGGGTTTAACTaGATCGTGTTCAATACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQGRSYTLKSKERVISLPGFN*IVFNTS Trigger: CGAGGTATTGAACACGATCCAGTTAAACCCAGGCAG...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCACAGAGCTGTTTTCCCTaGGAAGTTCTTGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSQSCFP*EVLAAA Trigger: GGCTGCAGCAAGAACTTCCCAGGGAAAACAGCTCTG...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGCTAAGCTGTGTGTGCTaGAGCAGCAGGCTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLLSCVC*SSRLFC Trigger: GCAGAAGAGCCTGCTGCTCCAGCACACACAGCTTAG...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAACTGTCTACACACTCTaGTGGCAGACAGCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSTVYTL*WQTAWL Trigger: CAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGT...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCATTACGGATTGGCATCTaGCTGAAGAGCTGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSLRIGI*LKSCGT Trigger: AGTGCCACAGCTCTTCAGCCAGATGCCAATCCGTAA...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR TCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGGATTTCTTTTGCCCTaGGGAGACACGGCAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLGFLLP*GDTAGI Trigger: TATTCCTGCCGTGTCTCCTCAGGGCAAAAGAAATCC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGCTCAGAGCTGGCAATTaGCACCTTTGGCTGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLLRAGN*HLWLTT Trigger: AGTTGTCAGCCAAAGGTGCCAATTGCCAGCTCTGAG...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR TCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGAGAGAATCAAGCCACTaGAGCAAGCCTTGTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLRESSH*SKPCFR Trigger: TCGGAAACAAGGCTTGCTTCAGTGGCTTGATTCTCT...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAACCCTTCAATGTAAGTaGTTGGCAGCAAATCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSTLQCK*LAANLL Trigger: CAGCAGATTTGCTGCCAAGCACTTACATTGAAGGGT...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCACTTCTGCAACTCCAATaGAAAATGGTAGTCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNYISSQGRSYTLKSLLQLQ*KMVVRV Trigger: CACACGGACTACCATTTTGCATTGGAGTTGCAGAAG...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGTGGGATTCAGTGAACTaGGTCAGGTCACCCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLWDSVN*VRSPMY Trigger: ATACATGGGTGACCTGACCCAGTTCACTGAATCCCA...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGTGGTTTGGCTGCTTTaGAACACAAGTGAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLVVWLL*NTSEGL Trigger: CAAGCCTTCACTTGTGTTCCAAAGCAGCCAAACCAC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| 3UTR CAA 72 bp | CAAGAACATATTCCATGTAAGTCACTGCAAGAGTTCTaGCTTTTAAGAAACTACATATCTAGCCAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEHIPCKSLQEF*LLRNYISSQGR Trigger: TCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAAGAACTCTTGCAGTGACTTACATGGAATATGTTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGGCTTCATAGCTAACTaGAATAATTCCACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLGFIAN*NNSTTF Trigger: AAAGGTGGTGGAATTATTGCAGTTAGCTATGAAGCC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGATAGTTTTAGGTAACTaGCTGGGTTTAACTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLIVLGN*LGLTGS Trigger: CGATCCAGTTAAACCCAGGCAGTTACCTAAAACTAT...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGTTTCTTGTACAGCACTaGTCAAATCTATATAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSEKPAWLKKTAKSITLFLVQH*SNLYKP Trigger: AGGCTTATATAGATTTGACCAGTGCTGTACAAGAAA...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | ACCACTGTCTACACACTCTGCTGGCAGACAGCTTGGTTGCGCTGCAGGGCTGGCCCACCTTTCCATGATTaGTACTGTACAACTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TTVYTLCWQTAWLRCRAGPPFHD*YCTTAQ Trigger: TTGTGCAGTTGTACAGTACAAATCATGGAAAGGTGG...GCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCAGCAGAGTGTGTAGACAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233438.2 |
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| CDS TCA 90 bp | TGGCTGCTCTCATTTCTTCCACAATCATGGCTCCCACAGTCAGCCTaGGGTCTGGAGAGGTGGGATCATCACTCTGAAGAGAATCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WLLSFLPQSWLPQSA*GLERWDHHSEENQA Trigger: GGCTTGATTCTCTTCAGAGTGATGATCCCACCTCTCCAGACCTCAGGCTGACTGTGGGAGCCATGATTGTGGAAGAAATGAGAGCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCTGGCAGACAGCTTGGTaGCGCTGCAGGGCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISSQGRSYTLKSKERVISWQTAW*RCRAGL Trigger: CAGGCCAGCCCTGCAGCGCAACCAAGCTGTCTGCCA...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | TGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCCCATCTACCAGGGTTTGGCGGTaGGGCTTATTTAGTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WLKKTAKSITLAVCTCPSTRVWR*GLFSPQ Trigger: TTGTGGACTAAATAAGCCCAACCGCCAAACCCTGGT...AGATGGGCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | TTAATAGTCCTCGTTTTCCTTCCAGAACTGGGAAGTGAACATGGGGCCTTGCACCCACCTTTCCATGATTaGTACTGTACAACTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LIVLVFLPELGSEHGALHPPFHD*YCTTAQ Trigger: TTGTGCAGTTGTACAGTACAAATCATGGAAAGGTGG...GTGCAAGGCCCCATGTTCACTTCCCAGTTCTGGAAGGAAAACGAGGACTATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | CCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGCCGTTTGCACTTGCTTCCCTGGGAAGTTCTaGCTGCAGCCAATAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PAWLKKTAKSITLAVCTCFPGKF*LQPIVL Trigger: TAAAACTATTGGCTGCAGCAAGAACTTCCCAGGGAA...GCAAGTGCAAACGGCCAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCTCTCAGAGCTGGCAATaGGCACCTTTGGCTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISSQGRSYTLKSKERVISSQSWQ*APLADN Trigger: GTTGTCAGCCAAAGGTGCCAATTGCCAGCTCTGAGA...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCCTGACTTCCTGTGGTTaGGCTGCTTTGGAACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISSQGRSYTLKSKERVISLTSCG*AALEHK Trigger: CTTGTGTTCCAAAGCAGCCAAACCACAGGAAGTCAG...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGGAGAATCGAGCACGTTaGGACTGTCCCCAGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: NLSEKPAWLKKTAKSITLENRAR*DCPQPH Trigger: ATGTGGCTGGGGACAGTCCAAACGTGCTCGATTCTC...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | ATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCAAAGGAAAGGGTAATTTCCTTTGCCAGGACCTTATaGTGTGAGATTCCAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISSQGRSYTLKSKERVISFARTL*CEIPAE Trigger: TTCAGCTGGAATCTCACACAATAAGGTCCTGGCAAA...GGAAATTACCCTTTCCTTTGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CAA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGCTAGCTTCCCGGTACTaGGTGAGGTTAGCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLSEKPAWLKKTAKSITLLASRY*VRLAFP Trigger: TGGAAAAGCTAACCTCACCAAGTACCGGGAAGCTAG...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS-3UTR CAA 90 bp | AATTTATCAGAAAAGCCTGCATGGCTGAAAAAGACTGCTAAATCCATTACTTTGCTTCAATGTAAGTGCTaGGCAGCAAATCTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSEKPAWLKKTAKSITLLQCKC*AANLLR Trigger: TCTCAGCAGATTTGCTGCCAAGCACTTACATTGAAG...CAAAGTAATGGATTTAGCAGTCTTTTTCAGCCATGCAGGCTTTTCTGATAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
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| CDS-3UTR CAA 90 bp | TTGCTTTTAAGAAACTACATATCTAGCCAGGGAAGAAGCTACACACTAAAGTCATTATCATTTCGATCTTaGGTTAGCCTCTCCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRNYISSQGRSYTLKSLSFRS*VSLSSS Trigger: ACTTGAGGAGAGGCTAACCAAAGATCGAAATGATAA...TGACTTTAGTGTGTAGCTTCTTCCCTGGCTAGATATGTAGTTTCTTAAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS CAA 90 bp | GGTGGGATCATCACTCTGAAGAGAATCAAGCCACTGAAGCAAGCCTaGTTTCCGAATAGCCTCTTTCTGAACAGTCTCTTCTACTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGIITLKRIKPLKQA*FPNSLFLNSLFYCR Trigger: CCTACAGTAGAAGAGACTGTTCAGAAAGAGGCTATTCGGAAACAAGGCTTGCTTCAGTGGCTTGATTCTCTTCAGAGTGATGATCCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS CAA 72 bp | ATCACTCTGAAGAGAATCAAGCCACTGAAGCAAGCCTaGTTTCCGAATAGCCTCTTTCTGAACAGTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITLKRIKPLKQA*FPNSLFLNSLF Trigger: GAAGAGACTGTTCAGAAAGAGGCTATTCGGAAACAAGGCTTGCTTCAGTGGCTTGATTCTCTTCAGAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024749.9 |
||
| CDS TCA 72 bp | TTCATAGCTAACTGCAATAATTCCACCACCTTTCCATaGTTTGTACTGTACAACTGCACAAGGTTTATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FIANCNNSTTFP*FVLYNCTRFIP Trigger: AGGAATAAACCTTGTGCAGTTGTACAGTACAAATCATGGAAAGGTGGTGGAATTATTGCAGTTAGCTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024749.9 ENSMUST00000233438.2 |
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