Pregenerated sensors for POLG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020718Ensembl transcript IDs: ENSMUST00000021060.6, ENSMUST00000126201.2, ENSMUST00000127061.8, ENSMUST00000134029.8, ENSMUST00000155107.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTGTGCAGTGCCTGTGGAGGACAGAGGAGGTTGCTGAATCCCTaGGCGGCTGCAGCTCTGAGCCACCTAACTTGGAGGCTGGGAACC | + |
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Preference number: 1 (lower is better) Translates to: CVCSACGGQRRLLNP*AAAALSHLTWRLGT Trigger: GGTTCCCAGCCTCCAAGTTAGGTGGCTCAGAGCTGCAGCCGCTCAGGGATTCAGCAACCTCCTCTGTCCTCCACAGGCACTGCACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 90 bp | AGGAGTTCTCTGCCAGCTGGAAGGAATCGTAGAGGTAAGCCAGCGTaGCCAGGTCTACGTCCCCACTTACAGACAGAACGCAAGGAACCA | + |
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Preference number: 1 (lower is better) Translates to: RSSLPAGRNRRGKPA*PGLRPHLQTERKEP Trigger: TGGTTCCTTGCGTTCTGTCTGTAAGTGGGGACGTAGACCTGGGCACGCTGGCTTACCTCTACGATTCCTTCCAGCTGGCAGAGAACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR CCA 90 bp | GCTCTGAGCCACCTAACTTGGAGGCTGGGAACCAGACTTAGACTCTaGAAGAACAGTAAGCACTCAACCACTAAGCCTCCCTCCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: ALSHLTWRLGTRLRL*KNSKHSTTKPPSSP Trigger: GGGGCTGGAGGGAGGCTTAGTGGTTGAGTGCTTACTGTTCTTCCAGAGTCTAAGTCTGGTTCCCAGCCTCCAAGTTAGGTGGCTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR CCA 90 bp | GGATTTATGTTTTGTGTGTGTGTGTGTGTGTGTGTGCAGTGCCTGTaGAGGACAGAGGAGGTTGCTGAATCCCTGAGCGGCTGCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GFMFCVCVCVCVQCL*RTEEVAESLSGCSS Trigger: AGAGCTGCAGCCGCTCAGGGATTCAGCAACCTCCTCTGTCCTCCACAGGCACTGCACACACACACACACACACACACAAAACATAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR TCA 90 bp | ACTGGAGAAGCTGAGGTGAACATAGAAATACTTGACAGGGGCTGGTaGGATGGCTCAATGGGTAAGAGCACCCGACTGTTCTTCCGAAGG | + |
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Preference number: 1 (lower is better) Translates to: TGEAEVNIEILDRGW*DGSMGKSTRLFFRR Trigger: CCTTCGGAAGAACAGTCGGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCTGTCAAGTATTTCTATGTTCACCTCAGCTTCTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 90 bp | GCTGACGCTAGGTACTTGACCAGGAAGTCTCTCAGCTTGGATATGTaGATCATTTCCTTCATCGTGGTGTCTCTGCTCCGCAGCTGGATT | + |
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Preference number: 1 (lower is better) Translates to: ADARYLTRKSLSLDM*IISFIVVSLLRSWI Trigger: AATCCAGCTGCGGAGCAGAGACACCACGATGAAGGAAATGATGCACATATCCAAGCTGAGAGACTTCCTGGTCAAGTACCTAGCGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR TCA 90 bp | AAGTTAGAGGGACTCATAGCAAACTTTCTCCACCACAGAAGCCGATaGCGCAACCAGAAATCAAGCCACTGGCTCGAAGTCCTTGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: KLEGLIANFLHHRSR*RNQKSSHWLEVLVG Trigger: TCCCACAAGGACTTCGAGCCAGTGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGGAGAAAGTTTGCTATGAGTCCCTCTAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR CCA 90 bp | GATATGTGCATCATTTCCTTCATCGTGGTGTCTCTGCTCCGCAGCTaGATTAGCCCATTTTCCAGCGTAGTCTCAGTGACCAGAACTGAG | + |
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Preference number: 1 (lower is better) Translates to: DMCIISFIVVSLLRS*ISPFSSVVSVTRTE Trigger: CTCAGTTCTGGTCACTGAGACTACGCTGGAAAATGGGCTAATCCAGCTGCGGAGCAGAGACACCACGATGAAGGAAATGATGCACATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR GCA 90 bp | AGAACAGTAAGCACTCAACCACTAAGCCTCCCTCCAGCCCCATTTTaGAGATTACATTTAGAAGAGATTGTTTCTATCTGTAGAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: RTVSTQPLSLPPAPF*RLHLEEIVSICRMK Trigger: TTTCATTCTACAGATAGAAACAATCTCTTCTAAATGTAATCTGCAAAATGGGGCTGGAGGGAGGCTTAGTGGTTGAGTGCTTACTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGAGGAGTTAAGCTCTCACCATGTGGTGGTGGACTGGATTGGGGGAAGCGGAGGCTCTTCTTCCTaGCAAAGGAGTTCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: ETEELSSHHVVVDWIGGSGGSSS*QRSSLP Trigger: TGGCAGAGAACTCCTTTGCCAGGAAGAAGAGCCTCC...GCTTCCCCCAATCCAGTCCACCACCACATGGTGAGAGCTTAACTCCTCAGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR CCA 90 bp | ACCGTTGGGCCTTTCCCCACATCCAAAGCGACCTTAATAGGGGCTAAACAAGGGCAGAAATCAAGCCACTaGCTCGAAGTCCTTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TVGPFPTSKATLIGAKQGQKSSH*LEVLVG Trigger: TCCCACAAGGACTTCGAGCCAGTGGCTTGATTTCTG...CCCTTGTTTAGCCCCTATTAAGGTCGCTTTGGATGTGGGGAAAGGCCCAACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGTGGGAAGGCAGAGCAGTGTTGAGATCTATACAGAAGCTAGGTGTATGTGTGTGTGTGTGTGTGTaGAGTGCCTGTGGAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: WWWEGRAVLRSIQKLGVCVCVCV*SACGGQ Trigger: CTGTCCTCCACAGGCACTGCACACACACACACACAC...ACATACACCTAGCTTCTGTATAGATCTCAACACTGCTCTGCCTTCCCACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR CAA 90 bp | ACATTGCTAGCTGACGCTAGGTACTTGACCAGGAAGTCTCTCAGCTaGGATATGTGCATCATTTCCTTCATCGTGGTGTCTCTGCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: TLLADARYLTRKSLS*DMCIISFIVVSLLR Trigger: GCGGAGCAGAGACACCACGATGAAGGAAATGATGCACATATCCAAGCTGAGAGACTTCCTGGTCAAGTACCTAGCGTCAGCTAGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGTCTCTCAGCTTGGATATGTGCATCATTTCCTTCATCGTGGTGTCTCTGCACCACAGAAGCCGATaGCGCAACCAGAAATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RKSLSLDMCIISFIVVSLHHRSR*RNQKSS Trigger: GCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTG...CAGAGACACCACGATGAAGGAAATGATGCACATATCCAAGCTGAGAGACTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR CAA 90 bp | ATGTGTGTAGGAGTTCTTGATCTCCTAGGTTCCACAGGGTTTCTATaGGCTCCTTTCCCCAGGGGAAGCTGTAGTAAAGTTTGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: MCVGVLDLLGSTGFL*APFPRGSCSKVCFP Trigger: AGGGAAGCAAACTTTACTACAGCTTCCCCTGGGGAAAGGAGCCAATAGAAACCCTGTGGAACCTAGGAGATCAAGAACTCCTACACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTAAATTTCTTCAGGAATaGTGCCTCGGACCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KFASLASQFILTISAAEVKFLQE*CLGPLP Trigger: AGGCAAAGGTCCGAGGCATCATTCCTGAAGAAATTT...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTACCTTTGCCTCAAGGTaGATCACTCTGATGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: KFASLASQFILTISAAEVTFASR*ITLMLL Trigger: TAATAACATCAGAGTGATCCACCTTGAGGCAAAGGT...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR CAA 90 bp | TTAGAGAATATGAAGACCTACACATTGCTAGCTGACGCTAGGTACTaGACCAGGAAGTCTCTCAGCTTGGATATGTGCATCATTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LENMKTYTLLADARY*TRKSLSLDMCIISF Trigger: GAAGGAAATGATGCACATATCCAAGCTGAGAGACTTCCTGGTCAAGTACCTAGCGTCAGCTAGCAATGTGTAGGTCTTCATATTCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATTCATGTTACTTCGGTTCTGATTCTATACACCTAACTTTCATCCCTGAACGTCCCAATTCATCCTaGCAATCAGCGCTGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: FHSCYFGSDSIHLTFIPERPNSS*QSALLK Trigger: CTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACG...TTCAGGGATGAAAGTTAGGTGTATAGAATCAGAACCGAAGTAACATGAATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTGCTCGTCAAACTGAATaGTTTACAAATTTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: KFASLASQFILTISAAEVARQTE*FTNFFR Trigger: CCTGAAGAAATTTGTAAAGCATTCAGTTTGACGAGC...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATGTTAGTGCTCAGAAGTGTCAGATGTTGGATTTTTCAGTGAGAGATGATTGTGTGTGTGTGCAGTaGCTGTGGAGGACAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KNVSAQKCQMLDFSVRDDCVCVQ*LWRTEE Trigger: CTCCTCTGTCCTCCACAGGCACTGCACACACACACA...ATCATCTCTCACTGAAAAATCCAACATCTGACACTTCTGAGCACTAACATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGGAAGGACATGTTTACCTGTCTTCCATTTTGAATGGAGTTGCTCTAATGAAACAGACTCCAATCTaGGCAAGACCGAAAGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SKEGHVYLSSILNGVALMKQTPI*ARPKGS Trigger: GCTACCTTTCGGTCTTGCTCAGATTGGAGTCTGTTT...CATTAGAGCAACTCCATTCAAAATGGAAGACAGGTAAACATGTCCTTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR CAA 90 bp | CAGCAGACACTGTTCTCCAATGCCGAGGTGTTGCTCACTAATCATTaGCTATTTTTAAGGATTTATGTTTTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QQTLFSNAEVLLTNH*LFLRIYVLCVCVCV Trigger: CACACACACACACACACACAAAACATAAATCCTTAAAAATAGCAAATGATTAGTGAGCAACACCTCGGCATTGGAGAACAGTGTCTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR CAA 90 bp | TCTGGCCCTCTACAACAGCAGACACTGTTCTCCAATGCCGAGGTGTaGCTCACTAATCATTTGCTATTTTTAAGGATTTATGTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SGPLQQQTLFSNAEV*LTNHLLFLRIYVLC Trigger: ACACAAAACATAAATCCTTAAAAATAGCAAATGATTAGTGAGCAACACCTCGGCATTGGAGAACAGTGTCTGCTGTTGTAGAGGGCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR CAA 90 bp | CAGGCAATTAACATAGTGCTCCAAGGCACCTCTATAGTTTTAGGTTaGCTCGTCAAACTGAATGCTTTACAAATTTCTTCAGGAATGATG | + |
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Preference number: 2 (lower is better) Translates to: QAINIVLQGTSIVLG*LVKLNALQISSGMM Trigger: CATCATTCCTGAAGAAATTTGTAAAGCATTCAGTTTGACGAGCAAACCTAAAACTATAGAGGTGCCTTGGAGCACTATGTTAATTGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR TCA 72 bp | AGTGCCTGTGGAGGACAGAGGAGGTTGCTGAATCCCTaGGCGGCTGCAGCTCTGAGCCACCTAACTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SACGGQRRLLNP*AAAALSHLTWR Trigger: CCTCCAAGTTAGGTGGCTCAGAGCTGCAGCCGCTCAGGGATTCAGCAACCTCCTCTGTCCTCCACAGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 72 bp | TGGAGGACAGAGGAGGTTGCTGAATCCCTGAGCGGCTaGAGCTCTGAGCCACCTAACTTGGAGGCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: WRTEEVAESLSG*SSEPPNLEAGN Trigger: GTTCCCAGCCTCCAAGTTAGGTGGCTCAGAGCTGCAGCCGCTCAGGGATTCAGCAACCTCCTCTGTCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 72 bp | CTGCCAGCTGGAAGGAATCGTAGAGGTAAGCCAGCGTaGCCAGGTCTACGTCCCCACTTACAGACAGAACGC | + |
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Preference number: 3 (lower is better) Translates to: LPAGRNRRGKPA*PGLRPHLQTER Trigger: GCGTTCTGTCTGTAAGTGGGGACGTAGACCTGGGCACGCTGGCTTACCTCTACGATTCCTTCCAGCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR CCA 72 bp | TTTTGTGTGTGTGTGTGTGTGTGTGTGCAGTGCCTGTaGAGGACAGAGGAGGTTGCTGAATCCCTGAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: FCVCVCVCVQCL*RTEEVAESLSG Trigger: GCCGCTCAGGGATTCAGCAACCTCCTCTGTCCTCCACAGGCACTGCACACACACACACACACACACACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCTCAGCTTGGATATGTGCATCATTTCCTTCATCGTGGTGTCTCTGCTCCGGGAAGCCTAGGGCCGTaGCTGTCTCCAAACTCGTGC | + |
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Preference number: 3 (lower is better) Translates to: VSQLGYVHHFLHRGVSAPGSLGP*LSPNSC Trigger: GCACGAGTTTGGAGACAGCAACGGCCCTAGGCTTCC...CGGAGCAGAGACACCACGATGAAGGAAATGATGCACATATCCAAGCTGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTGGTGGGAAGGCAGAGCAGTGTTGAGATCTATACAGAAGCTAGGTGTATGTTCCACAGGGTTTCTATaGGCTCCTTTCCCCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WWWEGRAVLRSIQKLGVCSTGFL*APFPRG Trigger: TCCCCTGGGGAAAGGAGCCAATAGAAACCCTGTGGA...ACATACACCTAGCTTCTGTATAGATCTCAACACTGCTCTGCCTTCCCACCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR TCA 72 bp | GGACTCATAGCAAACTTTCTCCACCACAGAAGCCGATaGCGCAACCAGAAATCAAGCCACTGGCTCGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: GLIANFLHHRSR*RNQKSSHWLEV Trigger: GACTTCGAGCCAGTGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGGAGAAAGTTTGCTATGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR TCA 72 bp | GCTGAGGTGAACATAGAAATACTTGACAGGGGCTGGTaGGATGGCTCAATGGGTAAGAGCACCCGACTGTTC | + |
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Preference number: 3 (lower is better) Translates to: AEVNIEILDRGW*DGSMGKSTRLF Trigger: GAACAGTCGGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCTGTCAAGTATTTCTATGTTCACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR CCA 72 bp | ATCATTTCCTTCATCGTGGTGTCTCTGCTCCGCAGCTaGATTAGCCCATTTTCCAGCGTAGTCTCAGTGACC | + |
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Preference number: 3 (lower is better) Translates to: IISFIVVSLLRS*ISPFSSVVSVT Trigger: GGTCACTGAGACTACGCTGGAAAATGGGCTAATCCAGCTGCGGAGCAGAGACACCACGATGAAGGAAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR CCA 72 bp | CACCTAACTTGGAGGCTGGGAACCAGACTTAGACTCTaGAAGAACAGTAAGCACTCAACCACTAAGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HLTWRLGTRLRL*KNSKHSTTKPP Trigger: GGGAGGCTTAGTGGTTGAGTGCTTACTGTTCTTCCAGAGTCTAAGTCTGGTTCCCAGCCTCCAAGTTAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR TCA 72 bp | CTACATACTGAGTTCAAGGCCAGCCCAGGGCAAGGCTaGGATGCTATAGAGGACGTACGTTGCATACAGATA | + |
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Preference number: 3 (lower is better) Translates to: LHTEFKASPGQG*DAIEDVRCIQI Trigger: TATCTGTATGCAACGTACGTCCTCTATAGCATCTCAGCCTTGCCCTGGGCTGGCCTTGAACTCAGTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR GCA 72 bp | TTGGCTCCTTTCCCCAGGGGAAGCTGTAGTAAAGTTTaGTTCCCTTGCGTCCCAATTCATCCTGACAATCAG | + |
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Preference number: 3 (lower is better) Translates to: LAPFPRGSCSKV*FPCVPIHPDNQ Trigger: CTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTTTACTACAGCTTCCCCTGGGGAAAGGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| 3UTR GCA 72 bp | TTTATGTTTTGTGTGTGTGTGTGTGTGTGTGTGCAGTaGCTGTGGAGGACAGAGGAGGTTGCTGAATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FMFCVCVCVCVQ*LWRTEEVAESL Trigger: CAGGGATTCAGCAACCTCCTCTGTCCTCCACAGGCACTGCACACACACACACACACACACACAAAACATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 72 bp | TTTTACGTTTGCTTGCCTGTATGTACACCATCTGTGTaGCTGGTACCCACAGAAGCCAGGAGCCTACAGTTA | + |
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Preference number: 3 (lower is better) Translates to: FYVCLPVCTPSV*LVPTEARSLQL Trigger: TAACTGTAGGCTCCTGGCTTCTGTGGGTACCAGGCACACAGATGGTGTACATACAGGCAAGCAAACGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR GCA 72 bp | CTGGAGTTAATGAACAGTTGTGAGCTGCCACATGAGTaGTGGTCACCAAATCTGTGTTCTCTGGTAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LELMNSCELPHE*WSPNLCSLVEQ Trigger: CTGCTCTACCAGAGAACACAGATTTGGTGACCAGCACTCATGTGGCAGCTCACAACTGTTCATTAACTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR CCA 72 bp | CTCTCAGCTTGGATATGTGCATCATTTCCTTCATCGTaGTGTCTCTGCTCCGCAGCTGGATTAGCCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: LSAWICASFPSS*CLCSAAGLAHF Trigger: AAAATGGGCTAATCCAGCTGCGGAGCAGAGACACCACGATGAAGGAAATGATGCACATATCCAAGCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| 3UTR CCA 72 bp | GAGTTAATGAACAGTTGTGAGCTGCCACATGAGTGCTaGTCACCAAATCTGTGTTCTCTGGTAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ELMNSCELPHEC*SPNLCSLVEQP Trigger: TGGCTGCTCTACCAGAGAACACAGATTTGGTGACCAGCACTCATGTGGCAGCTCACAACTGTTCATTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR CCA 72 bp | ACGCACATGAGTGTTTTACTTGTATGTATATCTGCATaGGCCTGGTGCCTACGGAGGCCACAAGAGGGAATT | + |
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Preference number: 3 (lower is better) Translates to: THMSVLLVCISA*AWCLRRPQEGI Trigger: AATTCCCTCTTGTGGCCTCCGTAGGCACCAGGCCCATGCAGATATACATACAAGTAAAACACTCATGTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTCAGAAGTGTCAGATGTTGGATTTTTCAGTGAGAGATGATTACCTCGTCTCTGAGCCACCTAACTaGGAGGCTGGGAACCAGACT | + |
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Preference number: 3 (lower is better) Translates to: SAQKCQMLDFSVRDDYLVSEPPN*EAGNQT Trigger: AGTCTGGTTCCCAGCCTCCAAGTTAGGTGGCTCAGA...GACGAGGTAATCATCTCTCACTGAAAAATCCAACATCTGACACTTCTGAGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGGGAACCAGACTTAGACTCTGGAAGAACAGTAAGCACTCAACCACTAAGCCCTCCAGCCCCATTTaGCAGATTACATTTAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RLGTRLRLWKNSKHSTTKPSSPI*QITFRR Trigger: TCTTCTAAATGTAATCTGCAAAATGGGGCTGGAGGG...CTTAGTGGTTGAGTGCTTACTGTTCTTCCAGAGTCTAAGTCTGGTTCCCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGAAACTGGAGTTAATGAACAGTTGTGAGCTGCCACATGAGTGCTGGTCATACCTGTCTTCCATTTaGAATGGAGTTGCTCTAATG | + |
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Preference number: 3 (lower is better) Translates to: ALKLELMNSCELPHECWSYLSSI*NGVALM Trigger: CATTAGAGCAACTCCATTCAAAATGGAAGACAGGTA...TGACCAGCACTCATGTGGCAGCTCACAACTGTTCATTAACTCCAGTTTCAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
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| 3UTR TCA 72 bp | GTCTTTTCACCAACTCTTGTAACACTGCTGGGTGTCTaGTTGCTGTTCGAAACAGGATGGAAACAGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VFSPTLVTLLGV*LLFETGWKQTP Trigger: TGGAGTCTGTTTCCATCCTGTTTCGAACAGCAATCAGACACCCAGCAGTGTTACAAGAGTTGGTGAAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR TCA 72 bp | ACATCCAAAGCGACCTTAATAGGGGCTAAACAAGGGTaGAGTTTAAGCACCTTTCTCTGGAGGCTCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TSKATLIGAKQG*SLSTFLWRLFF Trigger: GAAGAAGAGCCTCCAGAGAAAGGTGCTTAAACTTCACCCTTGTTTAGCCCCTATTAAGGTCGCTTTGGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR TCA 72 bp | GTGTTCTCTGGTAGAGCAGCCAGTGCTCTTAACTACTaGGCCTTCTTTCTGGCCCCAAACATTCAGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VFSGRAASALNY*AFFLAPNIQFL Trigger: TAAAAACTGAATGTTTGGGGCCAGAAAGAAGGCTCAGTAGTTAAGAGCACTGGCTGCTCTACCAGAGAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
||
| 3UTR TCA 72 bp | TTGCTGTTCGAAACAGGATGGAAACAGACTCCAATCTaGGCAAGACCGAAAGGTAGCTTTCTGTTTACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLFETGWKQTPI*ARPKGSFLFTR Trigger: TCTGGTAAACAGAAAGCTACCTTTCGGTCTTGCTCAGATTGGAGTCTGTTTCCATCCTGTTTCGAACAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR TCA 72 bp | GAAATCCCATTTTCTAGTAACTCATTAAGTAGCCCTTaGCAAACCTGTCGGAGTTCTACCGTTGGGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EIPFSSNSLSSP*QTCRSSTVGPF Trigger: GAAAGGCCCAACGGTAGAACTCCGACAGGTTTGTCAAGGGCTACTTAATGAGTTACTAGAAAATGGGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR GCA 72 bp | CACCTCTATAGTTTTAGGTTTGCTCGTCAAACTGAATaGTTTACAAATTTCTTCAGGAATGATGCCTCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HLYSFRFARQTE*FTNFFRNDASD Trigger: GTCCGAGGCATCATTCCTGAAGAAATTTGTAAAGCATTCAGTTTGACGAGCAAACCTAAAACTATAGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| 3UTR GCA 72 bp | GTAAAAAGATTGACTTCTTTCTATTTTACGTTTGCTTaGCTGTATGTACACCATCTGTGTGCCTGGTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VKRLTSFYFTFA*LYVHHLCAWYP Trigger: TGGGTACCAGGCACACAGATGGTGTACATACAGGCAAGCAAACGTAAAATAGAAAGAAGTCAATCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
||
| 3UTR CCA 72 bp | AAAGGAAGGACATGTTTACCTGTCTTCCATTTTGAATaGAGTTGCTCTAATGAGGAATGGACAGTTTCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGRTCLPVFHFE*SCSNEEWTVSE Trigger: TTCGGAAACTGTCCATTCCTCATTAGAGCAACTCCATTCAAAATGGAAGACAGGTAAACATGTCCTTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
||
| CDS-3UTR TCA 90 bp | CCACCACAGAAGCCGATGACGCAACCAGAAATCAAGCCACTGGCTCGAAGTCCTGCAGAGCAGCCGTGCTaGGCTGCTGCGGCGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PPQKPMTQPEIKPLARSPAEQPC*AAAASR Trigger: GCGGGACGCCGCAGCAGCTCAGCACGGCTGCTCTGC...AGGACTTCGAGCCAGTGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGCCCAGGTCTACGTCCCCACTTACAGACAGAACGCAAGGAACCACGTTTTCGGACAGCCAGCACCTaGAGGCCCTGCGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACPGLRPHLQTERKEPRFRTAST*RPCGRP Trigger: GGGCCTGCCGCAGGGCCTGCAGGTGCTGGCTGTCCG...AAAACGTGGTTCCTTGCGTTCTGTCTGTAAGTGGGGACGTAGACCTGGGCACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | GCGCTGCTGAAGTTAGAGGGACTCATAGCAAACTTTCTCCACCACAGAAGCCGACGGACAGCCAGCACCTaGAGGCCCTGCGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLKLEGLIANFLHHRSRRTAST*RPCGRP Trigger: GGGCCTGCCGCAGGGCCTGCAGGTGCTGGCTGTCCG...TCGGCTTCTGTGGTGGAGAAAGTTTGCTATGAGTCCCTCTAACTTCAGCAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGAAGCCGATGACGCAACCAGAAATCAAGCCACTGGCTCGAAGTCCTGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQKPMTQPEIKPLARSPEPGSW*RESTAK Trigger: CTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTC...AGGACTTCGAGCCAGTGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR TCA 90 bp | CATAGCAAACTTTCTCCACCACAGAAGCCGATGACGCAACCAGAAATCAAGCCAGCAGAGCAGCCGTGCTaGGCTGCTGCGGCGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSKLSPPQKPMTQPEIKPAEQPC*AAAASR Trigger: GCGGGACGCCGCAGCAGCTCAGCACGGCTGCTCTGC...TGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGGAGAAAGTTTGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | CTCGAAGTCCTTGTGGGAGTAAACCATACCAAGGAAGCTTCCGTCTTTTCACCACGGACAGCCAGCACCTaGAGGCCCTGCGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEVLVGVNHTKEASVFSPRTAST*RPCGRP Trigger: GGGCCTGCCGCAGGGCCTGCAGGTGCTGGCTGTCCG...TGGTGAAAAGACGGAAGCTTCCTTGGTATGGTTTACTCCCACAAGGACTTCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGGCTCGAAGTCCTTGTGGGAGTAAACCATACCAAGGAAGCTTCCGTCTTGAAGAGCCCGGCTCCTaGTGGAGGGAGTCCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLARSPCGSKPYQGSFRLEEPGS*WRESTA Trigger: CGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTC...AAGACGGAAGCTTCCTTGGTATGGTTTACTCCCACAAGGACTTCGAGCCAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR TCA 90 bp | CTGATTGCTGTTCGAAACAGGATGGAAACAGACTCCAATCTGAGCAAGACCGAAGCAGAGCAGCCGTGCTaGGCTGCTGCGGCGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LIAVRNRMETDSNLSKTEAEQPC*AAAASR Trigger: GCGGGACGCCGCAGCAGCTCAGCACGGCTGCTCTGC...TTCGGTCTTGCTCAGATTGGAGTCTGTTTCCATCCTGTTTCGAACAGCAATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR TCA 90 bp | TCGAAACAGGATGGAAACAGACTCCAATCTGAGCAAGACCGAAAGGTAGCTTTCGCAGAGCAGCCGTGCTaGGCTGCTGCGGCGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQDGNRLQSEQDRKVAFAEQPC*AAAASR Trigger: GCGGGACGCCGCAGCAGCTCAGCACGGCTGCTCTGC...GAAAGCTACCTTTCGGTCTTGCTCAGATTGGAGTCTGTTTCCATCCTGTTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | TCGAAACAGGATGGAAACAGACTCCAATCTGAGCAAGACCGAAAGGTAGCTTTCCGGACAGCCAGCACCTaGAGGCCCTGCGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQDGNRLQSEQDRKVAFRTAST*RPCGRP Trigger: GGGCCTGCCGCAGGGCCTGCAGGTGCTGGCTGTCCG...GAAAGCTACCTTTCGGTCTTGCTCAGATTGGAGTCTGTTTCCATCCTGTTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGTAGTAAAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCGGGGCGTCAGGCTGCTaGGTCCCATCTGCGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSKVCFPCVPIHPDNQRGASGC*VPSAGP Trigger: GGGTCCCGCAGATGGGACGCAGCAGCCTGACGCCCC...GCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTTTACTACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAGGGTTTCTATTGGCTCCTTTCCCCAGGGGAAGCTGTAGTAAAGTTTGCGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STGFLLAPFPRGSCSKVCEPGSW*RESTAK Trigger: CTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTC...GCAAACTTTACTACAGCTTCCCCTGGGGAAAGGAGCCAATAGAAACCCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFASLASQFILTISAAEVEPGSW*RESTAK Trigger: CTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTC...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGAGTAAACCATACCAAGGAAGCTTCCGTCTTTTCACCAACTCTTGTAACGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSKPYQGSFRLFTNSCNEPGSW*RESTAK Trigger: CTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTC...GTTACAAGAGTTGGTGAAAAGACGGAAGCTTCCTTGGTATGGTTTACTCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR CAA 72 bp | CATGGGCCTGGTGCCTACGGAGGCCACAAGAGGGAATaGGATGCCCTGAAACTGGAGTTAATGAACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGPGAYGGHKRE*DALKLELMNSC Trigger: ACAACTGTTCATTAACTCCAGTTTCAGGGCATCCAATTCCCTCTTGTGGCCTCCGTAGGCACCAGGCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155107.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGTGGGAGTAAACCATACCAAGGAAGCTTCCGTCTTTTCACCAACTCTTCTGGAGAGACTAACCTaGAGGCACTGTCCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLVGVNHTKEASVFSPTLLERLT*RHCPSA Trigger: AGCCGAGGGACAGTGCCTTCAGGTTAGTCTCTCCAG...AAGAGTTGGTGAAAAGACGGAAGCTTCCTTGGTATGGTTTACTCCCACAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTTCCACCGCGAAGACCTaGTCCCTGAACACCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: KFASLASQFILTISAAEVSTAKT*SLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGA...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGTAGTAAAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTCCACCGCGAAGACCTaGTCCCTGAACACCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: SCSKVCFPCVPIHPDNQRSTAKT*SLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGA...GCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTTTACTACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGATTGCTGTTCGAAACAGGATGGAAACAGACTCCAATCTGAGCAAGACCTCCACCGCGAAGACCTaGTCCCTGAACACCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLIAVRNRMETDSNLSKTSTAKT*SLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGA...GGTCTTGCTCAGATTGGAGTCTGTTTCCATCCTGTTTCGAACAGCAATCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| 3UTR CAA 72 bp | GGAGTTCTTGATCTCCTAGGTTCCACAGGGTTTCTATaGGCTCCTTTCCCCAGGGGAAGCTGTAGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVLDLLGSTGFL*APFPRGSCSKV Trigger: AACTTTACTACAGCTTCCCCTGGGGAAAGGAGCCAATAGAAACCCTGTGGAACCTAGGAGATCAAGAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS-3UTR GCA 90 bp | TCCACCACAGAAGCCGATGACGCAACCAGAAATCAAGCCACTGGCTCGAAGTCCGCTCGTCAAACTGAATaGTTTACAAATTTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTEADDATRNQATGSKSARQTE*FTNFFR Trigger: CCTGAAGAAATTTGTAAAGCATTCAGTTTGACGAGC...GGACTTCGAGCCAGTGGCTTGATTTCTGGTTGCGTCATCGGCTTCTGTGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCACCAACTCTTGTAACACTGCTGGGTGTCTGATTGCTGTTCGAAACAGGACCTTTGCCTCAAGGTaGATCACTCTGAAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTNSCNTAGCLIAVRNRTFASR*ITLKAL Trigger: CAGTGCCTTCAGAGTGATCCACCTTGAGGCAAAGGT...CCTGTTTCGAACAGCAATCAGACACCCAGCAGTGTTACAAGAGTTGGTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGTAGTAAAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCAAATTTCTTCAGGAATaGTGCCTCGGACCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSKVCFPCVPIHPDNQRKFLQE*CLGPLP Trigger: AGGCAAAGGTCCGAGGCATCATTCCTGAAGAAATTT...GCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTTTACTACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
||
| CDS-3UTR GCA 90 bp | GTTTACCAGATCCAGGCAATTAACATAGTGCTCCAAGGCACCTCTATAGTTTTATCCACCGCGAAGACCTaGTCCCTGAACACCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: VYQIQAINIVLQGTSIVLSTAKT*SLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGA...TAAAACTATAGAGGTGCCTTGGAGCACTATGTTAATTGCCTGGATCTGGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGCTTCCCTTGCGTCCCAATTCATCCTGACAATCAGCGCTGCTGAAGTTCTCGGCTCTCTGTCTTaGAAGATTTCGCGTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KFASLASQFILTISAAEVLGSLS*KISRIL Trigger: AAGTATACGCGAAATCTTGCAAGACAGAGAGCCGAG...AACTTCAGCAGCGCTGATTGTCAGGATGAATTGGGACGCAAGGGAAGCAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| 3UTR CAA 72 bp | CCAGAACTGAGAAGAGGACACTCATCTCATCGTACTTaGAATGGAGTTGCTCTAATGAGGAATGGACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PELRRGHSSHRT*NGVALMRNGQF Trigger: AAACTGTCCATTCCTCATTAGAGCAACTCCATTCAAAGTACGATGAGATGAGTGTCCTCTTCTCAGTTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| 3UTR CAA 72 bp | AGAGAATATTTATTAGAGAATATGAAGACCTACACATaGCTAGCTGACGCTAGGTACTTGACCAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REYLLENMKTYT*LADARYLTRKS Trigger: AGACTTCCTGGTCAAGTACCTAGCGTCAGCTAGCAATGTGTAGGTCTTCATATTCTCTAATAAATATTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| 3UTR CAA 72 bp | CTACAACAGCAGACACTGTTCTCCAATGCCGAGGTGTaGCTCACTAATCATTTGCTATTTTTAAGGATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQQTLFSNAEV*LTNHLLFLRIY Trigger: ATAAATCCTTAAAAATAGCAAATGATTAGTGAGCAACACCTCGGCATTGGAGAACAGTGTCTGCTGTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
||
| 3UTR CAA 72 bp | AACATAGTGCTCCAAGGCACCTCTATAGTTTTAGGTTaGCTCGTCAAACTGAATGCTTTACAAATTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIVLQGTSIVLG*LVKLNALQISS Trigger: TGAAGAAATTTGTAAAGCATTCAGTTTGACGAGCAAACCTAAAACTATAGAGGTGCCTTGGAGCACTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
||
| 3UTR CAA 72 bp | TACAGCTTAAAGGTAATTTTAGACAGCGTCTTTGTTTaGACTATAGTCTGTCATAGGTCAGGTCATATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSLKVILDSVFV*TIVCHRSGHME Trigger: TTCCATATGACCTGACCTATGACAGACTATAGTCAAAACAAAGACGCTGTCTAAAATTACCTTTAAGCTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134029.8 |
||
| CDS GCA 90 bp | ACCAGCGCCTCGCGGGCCACCGCATGCTCGGGGGCGTCAGGCTGCTaGGTCCCATCTGCGGGACCCGCGTACCCGGACAGCCAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSASRATACSGASGC*VPSAGPAYPDSQHL Trigger: CAGGTGCTGGCTGTCCGGGTACGCGGGTCCCGCAGATGGGACGCAGCAGCCTGACGCCCCCGAGCATGCGGTGGCCCGCGAGGCGCTGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS GCA 90 bp | TGCCTCCTCCGGCAGAGGTCTACCAGCGCCTCGCGGGCCACCGCATaGTCGGGGGCGTCAGGCTGCTGCGTCCCATCTGCGGGACCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CLLRQRSTSASRATA*SGASGCCVPSAGPA Trigger: CGCGGGTCCCGCAGATGGGACGCAGCAGCCTGACGCCCCCGAGCATGCGGTGGCCCGCGAGGCGCTGGTAGACCTCTGCCGGAGGAGGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS CCA 90 bp | AGGCACCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTaGTGGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RHLKALSLGCEEPGS*WRESTAKTCSLNTT Trigger: GGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS CCA 90 bp | ACTAACCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTaGTGGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TNLKALSLGCEEPGS*WRESTAKTCSLNTT Trigger: GGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTTAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021060.6 ENSMUST00000127061.8 |
||
| CDS CCA 90 bp | ATCACTCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTaGTGGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: ITLKALSLGCEEPGS*WRESTAKTCSLNTT Trigger: GGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGAGTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
||
| CDS CCA 90 bp | CACCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: HLKALSLGCEEPGSW*RESTAKTCSLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134029.8 ENSMUST00000155107.8 |
||
| CDS GCA 90 bp | TGCGAAGAGCCCGGCTCCTGGTGGAGGGAGTCCACCGCGAAGACCTaGTCCCTGAACACCACCATAGAGGACCACCACTGTGAGGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: CEEPGSWWRESTAKT*SLNTTIEDHHCEAR Trigger: CCTAGCCTCACAGTGGTGGTCCTCTATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS GCA 90 bp | ACCTTTGCCTCAAGGTGGATCACTCTGAAGGCACTGTCCCTCGGCTaGGAAGAGCCCGGCTCCTGGTGGAGGGAGTCCACCGCGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: TFASRWITLKALSLG*EEPGSWWRESTAKT Trigger: GGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGAGTGATCCACCTTGAGGCAAAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
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| CDS CCA 90 bp | AACCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACCATA | + |
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Preference number: 5 (lower is better) Translates to: NLKALSLGCEEPGSW*RESTAKTCSLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021060.6 ENSMUST00000127061.8 |
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| CDS CCA 90 bp | ACTCTGAAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAACACCACCATA | + |
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Preference number: 5 (lower is better) Translates to: TLKALSLGCEEPGSW*RESTAKTCSLNTTI Trigger: TATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
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| CDS GCA 90 bp | CGTATACTTTCTGGAGAGACTAACCTGAAGGCACTGTCCCTCGGCTaGGAAGAGCCCGGCTCCTGGTGGAGGGAGTCCACCGCGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: RILSGETNLKALSLG*EEPGSWWRESTAKT Trigger: GGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTTAGTCTCTCCAGAAAGTATACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021060.6 ENSMUST00000127061.8 |
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| CDS TCA 90 bp | CTCTGTCTTGCAAGATTTCGCGTATACTTTCTGGAGAGACTAACCTaGAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: LCLARFRVYFLERLT*RHCPSAAKSPAPGG Trigger: TCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTTAGTCTCTCCAGAAAGTATACGCGAAATCTTGCAAGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021060.6 ENSMUST00000127061.8 |
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| CDS-3UTR CAA 90 bp | TCCACAGGGTTTCTATTGGCTCCTTTCCCCAGGGGAAGCTGTAGTAAAGTTTGCACTCGGCTCTCTGTCTaGCAAGATTTCGCGTATACT | + |
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Preference number: 5 (lower is better) Translates to: STGFLLAPFPRGSCSKVCTRLSV*QDFAYT Trigger: AGTATACGCGAAATCTTGCAAGACAGAGAGCCGAGT...GCAAACTTTACTACAGCTTCCCCTGGGGAAAGGAGCCAATAGAAACCCTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127061.8 |
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| CDS GCA 72 bp | GCCTCGCGGGCCACCGCATGCTCGGGGGCGTCAGGCTaGTGCGTCCCATCTGCGGGACCCGCGTACCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: ASRATACSGASG*CVPSAGPAYPD Trigger: GTCCGGGTACGCGGGTCCCGCAGATGGGACGCAGCAGCCTGACGCCCCCGAGCATGCGGTGGCCCGCGAGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS GCA 72 bp | TCGCGGGCCACCGCATGCTCGGGGGCGTCAGGCTGCTaGGTCCCATCTGCGGGACCCGCGTACCCGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SRATACSGASGC*VPSAGPAYPDS Trigger: GCTGTCCGGGTACGCGGGTCCCGCAGATGGGACGCAGCAGCCTGACGCCCCCGAGCATGCGGTGGCCCGCGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS GCA 72 bp | GCGTGGCACCCGCTCAGCAGAGCAGCCGTGCTGAGCTaGTGCGGCGTCCCGCTGAAAAAGTGCCTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AWHPLSRAAVLS*CGVPLKKCLLR Trigger: CCGGAGGAGGCACTTTTTCAGCGGGACGCCGCAGCAGCTCAGCACGGCTGCTCTGCTGAGCGGGTGCCACGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS CCA 72 bp | GCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTGGTaGAGGGAGTCCACCGCGAAGACCTGCTCCCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: ALSLGCEEPGSW*RESTAKTCSLN Trigger: GTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS CCA 72 bp | AAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCTCCTaGTGGAGGGAGTCCACCGCGAAGACCTGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KALSLGCEEPGS*WRESTAKTCSL Trigger: CAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS GCA 72 bp | CCCGGCTCCTGGTGGAGGGAGTCCACCGCGAAGACCTaGTCCCTGAACACCACCATAGAGGACCACCACTGT | + |
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Preference number: 6 (lower is better) Translates to: PGSWWRESTAKT*SLNTTIEDHHC Trigger: ACAGTGGTGGTCCTCTATGGTGGTGTTCAGGGAGCAGGTCTTCGCGGTGGACTCCCTCCACCAGGAGCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021060.6 ENSMUST00000126201.2 ENSMUST00000127061.8 ENSMUST00000134029.8 ENSMUST00000155107.8 |
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| CDS GCA 72 bp | TCAAGGTGGATCACTCTGAAGGCACTGTCCCTCGGCTaGGAAGAGCCCGGCTCCTGGTGGAGGGAGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SRWITLKALSLG*EEPGSWWREST Trigger: GGTGGACTCCCTCCACCAGGAGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGAGTGATCCACCTTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
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| CDS TCA 72 bp | GCAAGATTTCGCGTATACTTTCTGGAGAGACTAACCTaGAGGCACTGTCCCTCGGCTGCGAAGAGCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARFRVYFLERLT*RHCPSAAKSPA Trigger: AGCCGGGCTCTTCGCAGCCGAGGGACAGTGCCTTCAGGTTAGTCTCTCCAGAAAGTATACGCGAAATCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021060.6 ENSMUST00000127061.8 |
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| CDS CCA 72 bp | TCTTCAGGAATGATGCCTCGGACCTTTGCCTCAAGGTaGATCACTCTGAAGGCACTGTCCCTCGGCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: SSGMMPRTFASR*ITLKALSLGCE Trigger: TTCGCAGCCGAGGGACAGTGCCTTCAGAGTGATCCACCTTGAGGCAAAGGTCCGAGGCATCATTCCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126201.2 |
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