Pregenerated sensors for POLE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028394Ensembl transcript IDs: ENSMUST00000030091.10, ENSMUST00000128100.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTCCCCCTaGGCCTTTAGTGCTTCTGTGACTTGGAACACTGCAGGCAACATG | + |
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Preference number: 1 (lower is better) Translates to: TVKLGDQAQSPIVSP*AFSASVTWNTAGNM Trigger: CATGTTGCCTGCAGTGTTCCAAGTCACAGAAGCACTAAAGGCTCAGGGGGAAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR GCA 90 bp | AGACATGTCTCAGGATCTCAGGGTCCCCTCCACCACGCCACAGTCTaGCTACTCTCTCCATTCAGTTGTCTATTTCCTCCTCTTCGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RHVSGSQGPLHHATV*LLSPFSCLFPPLRS Trigger: AGAACGAAGAGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTGGAGGGGACCCTGAGATCCTGAGACATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR CCA 90 bp | CTGCCTACTCTCTCCATTCAGTTGTCTATTTCCTCCTCTTCGTTCTaGTCGTCCTCGTCCAGTCTCTCTTCATCCTCCTCCTCCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LPTLSIQLSISSSSF*SSSSSLSSSSSSSS Trigger: AGAGGAGGAGGAGGAGGATGAAGAGAGACTGGACGAGGACGACCAGAACGAAGAGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR GCA 90 bp | GGTCGTCCTCGTCCAGTCTCTCTTCATCCTCCTCCTCCTCCTCTCTaGTTTTGTCTTGCTCTTCGGAATCCTTTTTGTCTTTGTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GRPRPVSLHPPPPPL*FCLALRNPFCLCPS Trigger: AGAAGGACAAAGACAAAAAGGATTCCGAAGAGCAAGACAAAAGCAGAGAGGAGGAGGAGGAGGATGAAGAGAGACTGGACGAGGACGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR CCA 90 bp | TTTCTGGTCAGCTTTTATTTTGATCTCAGGCACCAGTGCCGAAGATaGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: FLVSFYFDLRHQCRR*LCLAGKAFTQTCLR Trigger: CCTGAGACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTGCCTGAGATCAAAATAAAAGCTGACCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR CCA 90 bp | ATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTaGTGCTACATTCCTGAGCACCATTCCTCTTACCGTAAGGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: MGKKKGQQTRSKPQQ*CYIPEHHSSYRKVQ Trigger: CTGAACCTTACGGTAAGAGGAATGGTGCTCAGGAATGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR TCA 90 bp | CCTGGAAGAAATAAAGTCTCTGGAACTTGTTATGAGCCCAGGGAATaGAAAGCAGCAGCCATAAGTCTGGGAGATGGATCTGGGATTTTA | + |
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Preference number: 1 (lower is better) Translates to: PGRNKVSGTCYEPRE*KAAAISLGDGSGIL Trigger: TAAAATCCCAGATCCATCTCCCAGACTTATGGCTGCTGCTTTTCATTCCCTGGGCTCATAACAAGTTCCAGAGACTTTATTTCTTCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR CCA 90 bp | AGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTaGAATATGACATATGTTATCAGAGTCCCTAGACTAGAAGATGAA | + |
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Preference number: 1 (lower is better) Translates to: RRQEIRTKESEDLAL*NMTYVIRVPRLEDE Trigger: TTCATCTTCTAGTCTAGGGACTCTGATAACATATGTCATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR CAA 90 bp | GGGTCCCCTCCACCACGCCACAGTCTGCCTACTCTCTCCATTCAGTaGTCTATTTCCTCCTCTTCGTTCTGGTCGTCCTCGTCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSPPPRHSLPTLSIQ*SISSSSFWSSSSSL Trigger: GAGACTGGACGAGGACGACCAGAACGAAGAGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTGGAGGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCAGGATCTCAGGGTGGTCAGCTTTTATTTTaGTCTCAGGCACCAGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: GSALQGKPSHRHVSGSQGGQLLF*SQAPVP Trigger: CGGCACTGGTGCCTGAGATCAAAATAAAAGCTGACC...ACCCTGAGATCCTGAGACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCGCCACCCCAGACGACTaGGCATCTACAGTCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: WSTQWGKRKANRHVRSHSATPDD*ASTVTR Trigger: TCTAGTGACTGTAGATGCTCAGTCGTCTGGGGTGGC...GCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | CATCACCTGTCAGCCTCAAGTGCACAACTAAGACAGGAAAAAGTGCTTGGAGCAAGAGTGTGTGTCCTATaGGTGCAGCCACCCCAGACG | + |
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Preference number: 2 (lower is better) Translates to: HHLSASSAQLRQEKVLGARVCVL*VQPPQT Trigger: CGTCTGGGGTGGCTGCACTCATAGGACACACACTCT...TGCTCCAAGCACTTTTTCCTGTCTTAGTTGTGCACTTGAGGCTGACAGGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCCATCTCTTCCATGGCTaGCAGCACGTCACTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: WSTQWGKRKANRHVRSHSHLFHG*QHVTGI Trigger: AATGCCAGTGACGTGCTGTCAGCCATGGAAGAGATG...GCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTGGTGCTACATTCCTACAGTCAAACTGGGTaGCCAGGCTCAAAGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: EKERPTDTFEATAVVLHSYSQTG*PGSKPH Trigger: ATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTA...GGAATGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAAGATGGCTCTGCCTTaGAGGGAAAGCCTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: WSTQWGKRKANRHVRSHSKMALP*RESLHT Trigger: TGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTT...GCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACCACGCCACAGTCTGCCTACTCTCTCCATTCAGTTGTCTATTTCCTCCTCAGAGGGGCAGGGAAATaGGATCAGAAACTAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: STTPQSAYSLHSVVYFLLRGAGK*DQKLAS Trigger: GCTAGCTAGTTTCTGATCCCATTTCCCTGCCCCTCT...GAGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTGGTGCTACAAATGCTACCATCAGGTaGAGACATTTCCTCGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: WGKRKANRHVRSHSSGATNATIR*RHFLVR Trigger: GCGAACGAGGAAATGTCTTCACCTGATGGTAGCATT...TGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAATGCTACCATCAGGTaGAGACATTTCCTCGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: WSTQWGKRKANRHVRSHSNATIR*RHFLVR Trigger: GCGAACGAGGAAATGTCTTCACCTGATGGTAGCATT...GCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGTGCCTGGAAGAAATAAAGTCTCTGGAACTTGTTATGAGCCCAGGGAACACCACGCCACAGTCTaGCTACTCTCTCCATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QAVPGRNKVSGTCYEPREHHATV*LLSPFS Trigger: ACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTG...TTCCCTGGGCTCATAACAAGTTCCAGAGACTTTATTTCTTCCAGGCACAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCACACCAGTGCCGAAGATaGCTCTGCCTTGCAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LESSHSKHEFLWSTTVQSHQCRR*LCLAGK Trigger: TTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTG...TGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCAGTGGTGCTACATTCCTGAGCACCATTCCTCTTACCGTAAGGTTCAGAGTGCTTCTGTGACTTaGAACACTGCAGGCAACATG | + |
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Preference number: 2 (lower is better) Translates to: PQQWCYIPEHHSSYRKVQSASVT*NTAGNM Trigger: CATGTTGCCTGCAGTGTTCCAAGTCACAGAAGCACT...CTGAACCTTACGGTAAGAGGAATGGTGCTCAGGAATGTAGCACCACTGCTGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAACTGTACAGTCAAACTaGGTGACCAGGCTCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGALNGEKERPTDTFEATTVQSN*VTRLKA Trigger: GGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGT...TGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCATCCTCCTCTTCGTTCTaGTCGTCCTCGTCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LESSHSKHEFLWSTTVQSSSSSF*SSSSSL Trigger: GAGACTGGACGAGGACGACCAGAACGAAGAGGAGGA...TGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR CAA 90 bp | TCCATCTCTTCCATGGCTGACAGCACGTCACTGGCATTGAGAGTCTaGCGCTTTCCTTTCATTGCGAAGTTATTGGCACTGCTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SISSMADSTSLALRV*RFPFIAKLLALLQN Trigger: ATTCTGGAGCAGTGCCAATAACTTCGCAATGAAAGGAAAGCGCAAGACTCTCAATGCCAGTGACGTGCTGTCAGCCATGGAAGAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | CATCACCTGTCAGCCTCAAGTGCACAACTAAGACAGGAAAAAGTGCTTGGAGCAGGTCAGCTTTTATTTTaGTCTCAGGCACCAGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: HHLSASSAQLRQEKVLGAGQLLF*SQAPVP Trigger: CGGCACTGGTGCCTGAGATCAAAATAAAAGCTGACC...TGCTCCAAGCACTTTTTCCTGTCTTAGTTGTGCACTTGAGGCTGACAGGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTGGTGCTACATTCCTACCATGGCAGGCACTaGGTTACCTCCAAGATTAAG | + |
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Preference number: 2 (lower is better) Translates to: EKERPTDTFEATAVVLHSYHGRH*VTSKIK Trigger: CTTAATCTTGGAGGTAACTCAGTGCCTGCCATGGTA...GGAATGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCATCAGGTGAAGACATTTCCTCGTTCGCTCGCTCACAGCTCCTTAGTCATTACCATGGCAGGCACTaGGTTACCTCCAAGATTAAG | + |
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Preference number: 2 (lower is better) Translates to: LPSGEDISSFARSQLLSHYHGRH*VTSKIK Trigger: CTTAATCTTGGAGGTAACTCAGTGCCTGCCATGGTA...ATGACTAAGGAGCTGTGAGCGAGCGAACGAGGAAATGTCTTCACCTGATGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCGCGCTTTCCTTTCATTaGGAAGTTATTGGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: WSTQWGKRKANRHVRSHSALSFH*EVIGTA Trigger: AGCAGTGCCAATAACTTCGCAATGAAAGGAAAGCGC...GCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATGCACCAGTGCCGAAGATaGCTCTGCCTTGCAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RRQEIRTKESEDLALWNMHQCRR*LCLAGK Trigger: TTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTG...CATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTGGTGCTACATTCCGCTTGGAGCACTCAATaGGGAAAAAGAAAGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: EKERPTDTFEATAVVLHSAWSTQ*GKRKAN Trigger: GTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCAAGC...GGAATGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | CGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCAGGATCGGGAAGAGTTCTTTTTaGTCTTTCTGGTCAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RRWLCLAGKAFTQTCLRIGKSSF*SFWSAF Trigger: AAAAGCTGACCAGAAAGATCAAAAAGAACTCTTCCC...GATCCTGAGACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGACAGAACAGGCTGTGCCTGGAAGAAATAAAGTCTCTGGAACTTGTTATGCCCATTGTTTCCCCCTaGGCCTTTAGTGCTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: WRQNRLCLEEIKSLELVMPIVSP*AFSASV Trigger: CACAGAAGCACTAAAGGCTCAGGGGGAAACAATGGG...CATAACAAGTTCCAGAGACTTTATTTCTTCCAGGCACAGCCTGTTCTGTCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCAAAGATGGCTCTGCCTTaGAGGGAAAGCCTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: LESSHSKHEFLWSTTVQSKMALP*RESLHT Trigger: TGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTT...TGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATGTGTGTCCTATGAGTaGAGCCACCCCAGACGACTG | + |
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Preference number: 2 (lower is better) Translates to: LEGRRLGLRNLRTLHFGICVSYE*SHPRRL Trigger: CAGTCGTCTGGGGTGGCTGCACTCATAGGACACACA...TATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTATGGTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTCCTTCTTCTTTTaGTCCGAAGCCTCCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FLWSTTVQSNWVTRLKAPLSFFF*SEASFL Trigger: CAAGAAGGAGGCTTCGGAGCAAAAGAAGAAGGACAA...TGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCATAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCAAACTGGGTGAGAGGGGCAGGGAAATaGGATCAGAAACTAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SHSKHEFLWSTTVQSNWVRGAGK*DQKLAS Trigger: GCTAGCTAGTTTCTGATCCCATTTCCCTGCCCCTCT...CACCCAGTTTGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACATTCCTGAGCACCATTCCTCTTACCGTAAGGTTCAGAGGTGTTCTCAACAGTGCTTCTGTGACTTaGAACACTGCAGGCAACATG | + |
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Preference number: 2 (lower is better) Translates to: ATFLSTIPLTVRFRGVLNSASVT*NTAGNM Trigger: CATGTTGCCTGCAGTGTTCCAAGTCACAGAAGCACT...GTTGAGAACACCTCTGAACCTTACGGTAAGAGGAATGGTGCTCAGGAATGTAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR CAA 90 bp | TCCTCGTCCAGTCTCTCTTCATCCTCCTCCTCCTCCTCTCTGCTTTaGTCTTGCTCTTCGGAATCCTTTTTGTCTTTGTCCTTCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSSLSSSSSSSSLL*SCSSESFLSLSFFF Trigger: AAAGAAGAAGGACAAAGACAAAAAGGATTCCGAAGAGCAAGACAAAAGCAGAGAGGAGGAGGAGGAGGATGAAGAGAGACTGGACGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCGAAGCCACAGCAGTGGTGCTACATTCCTGAGCACCATTCCTCTTACCGTACATAAGTCTGGGAGATaGATCTGGGATTTTATACCT | + |
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Preference number: 2 (lower is better) Translates to: VRSHSSGATFLSTIPLTVHKSGR*IWDFIP Trigger: AGGTATAAAATCCCAGATCCATCTCCCAGACTTATG...TACGGTAAGAGGAATGGTGCTCAGGAATGTAGCACCACTGCTGTGGCTTCGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCAAACTGGGTGAGAATGTGTGACAACTaGAAGAGAGCCGTAAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: SHSKHEFLWSTTVQSNWVRMCDN*KRAVSR Trigger: GCGACTTACGGCTCTCTTCCAGTTGTCACACATTCT...CACCCAGTTTGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATGTATGAGCCCAGGGAATaGAAAGCAGCAGCCATAAGT | + |
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Preference number: 2 (lower is better) Translates to: RRQEIRTKESEDLALWNMYEPRE*KAAAIS Trigger: ACTTATGGCTGCTGCTTTTCATTCCCTGGGCTCATA...CATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR TCA 90 bp | TTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCTCAAGTGCACCTGCTCCAGAATGTGTaGCAACTGGAAGAGAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: LLVNSVQLYYITCQPQVHLLQNV*QLEESR Trigger: ACGGCTCTCTTCCAGTTGTCACACATTCTGGAGCAG...GTGCACTTGAGGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTATGGTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCAACACTGCAGGCAACATaGATGTTATTACTTATTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLWSTTVQSNWVTRLKAPTLQAT*MLLLIQ Trigger: CTGAATAAGTAATAACATCCATGTTGCCTGCAGTGT...TGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCATAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCTGTATTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCATTCCATCTCTTCCATaGCTGACAGCACGTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LPCITSKQCPTILHHLSAIPSLP*LTARHW Trigger: CCAGTGACGTGCTGTCAGCCATGGAAGAGATGGAAT...GGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAATACAGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCAAACTGGGTGGGTGTTATGAATCGCTaGAATTCCATCTCTTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SHSKHEFLWSTTVQSNWVGVMNR*NSISSM Trigger: CATGGAAGAGATGGAATTCCAGCGATTCATAACACC...CACCCAGTTTGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATGTCATTGCGAAGTTATTaGCACTGCTCCAGAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RRQEIRTKESEDLALWNMSLRSY*HCSRMC Trigger: ACACATTCTGGAGCAGTGCCAATAACTTCGCAATGA...CATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTACTTATTCAGAGGGGCAGGGAAATGGGATCAGAAACTAGCTAGCCATATACGAAGTTATTGGCACTaGTCCAGAATGTGTGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: YYLFRGAGKWDQKLASHIRSYWH*SRMCDN Trigger: GTTGTCACACATTCTGGAGCAGTGCCAATAACTTCG...TATATGGCTAGCTAGTTTCTGATCCCATTTCCCTGCCCCTCTGAATAAGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCCTGTATTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCGGGAAGAGTTCTTTTTaGTCTTTCTGGTCAGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPCITSKQCPTILHHLSAGKSSF*SFWSAF Trigger: AAAAGCTGACCAGAAAGATCAAAAAGAACTCTTCCC...GGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAATACAGGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR TCA 72 bp | CTGGGTGACCAGGCTCAAAGCCCCATTGTTTCCCCCTaGGCCTTTAGTGCTTCTGTGACTTGGAACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGDQAQSPIVSP*AFSASVTWNTA Trigger: TGCAGTGTTCCAAGTCACAGAAGCACTAAAGGCTCAGGGGGAAACAATGGGGCTTTGAGCCTGGTCACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR GCA 72 bp | TCAGGATCTCAGGGTCCCCTCCACCACGCCACAGTCTaGCTACTCTCTCCATTCAGTTGTCTATTTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGSQGPLHHATV*LLSPFSCLFPP Trigger: AGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTGGAGGGGACCCTGAGATCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGTGCCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTGGTCAGCTTTTATTTaGATCTCAGGCACCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSAEDGSALQGKPSHRHVWSAFI*ISGTSA Trigger: GGCACTGGTGCCTGAGATCAAAATAAAAGCTGACCA...GACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCAGGATCTCCTCCTCTCTGCTTTaGTCTTGCTCTTCGGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RRWLCLAGKAFTQTCLRISSSLL*SCSSES Trigger: GGATTCCGAAGAGCAAGACAAAAGCAGAGAGGAGGA...GATCCTGAGACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCACCTGTCAGCCTCAAGTGCACAACTAAGACAGGAAAAAGTGCTTGGAGCAGAAGATGGCTCTGCCTaGCAGGGAAAGCCTTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: HHLSASSAQLRQEKVLGAEDGSA*QGKPSH Trigger: GTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTC...TGCTCCAAGCACTTTTTCCTGTCTTAGTTGTGCACTTGAGGCTGACAGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CCA 72 bp | CACGAGTTCCTATGGTCAACTACTGTACAGTCAAACTaGGTGACCAGGCTCAAAGCCCCATTGTTTCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HEFLWSTTVQSN*VTRLKAPLFPP Trigger: AGGGGGAAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCATAGGAACTCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CCA 72 bp | AAGAAAGGCCAACAGACACGTTCGAAGCCACAGCAGTaGTGCTACATTCCTGAGCACCATTCCTCTTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: KKGQQTRSKPQQ*CYIPEHHSSYR Trigger: ACGGTAAGAGGAATGGTGCTCAGGAATGTAGCACCACTGCTGTGGCTTCGAACGTGTCTGTTGGCCTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCAGAAGATGGCTCTGCCTaGCAGGGAAAGCCTTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LESSHSKHEFLWSTTVQSEDGSA*QGKPSH Trigger: GTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTC...TGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR GCA 72 bp | TTTCTGGTCAGCTTTTATTTTGATCTCAGGCACCAGTaGCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLVSFYFDLRHQ*RRWLCLAGKAF Trigger: GAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTGCCTGAGATCAAAATAAAAGCTGACCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CCA 72 bp | AGCTTTTATTTTGATCTCAGGCACCAGTGCCGAAGATaGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SFYFDLRHQCRR*LCLAGKAFTQT Trigger: TGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTGCCTGAGATCAAAATAAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CCA 72 bp | CTCCTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATaGTCAACTACTGTACAGTCAAACTGGGTGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLESSHSKHEFL*STTVQSNWVTR Trigger: CCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTTGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCTGGTCAGCTTTTATTTaGATCTCAGGCACCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SAWSTQWGKRKANRHVRSWSAFI*ISGTSA Trigger: GGCACTGGTGCCTGAGATCAAAATAAAAGCTGACCA...GCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCAAGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR TCA 72 bp | GCCCCATTGTTTCCCCCTGAGCCTTTAGTGCTTCTGTaGCTTGGAACACTGCAGGCAACATGGATGTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: APLFPPEPLVLL*LGTLQATWMLL Trigger: TAATAACATCCATGTTGCCTGCAGTGTTCCAAGTCACAGAAGCACTAAAGGCTCAGGGGGAAACAATGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGTGCCTGGAAGAAATAAAGTCTCTGGAACTTGTTATGAGCCCAGGGAATGCGCTTTCCTTTCATaGCGAAGTTATTGGCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: QAVPGRNKVSGTCYEPRECAFLS*RSYWHC Trigger: GCAGTGCCAATAACTTCGCAATGAAAGGAAAGCGCA...TTCCCTGGGCTCATAACAAGTTCCAGAGACTTTATTTCTTCCAGGCACAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTCCACTCTCTCCATTCAGTaGTCTATTTCCTCCTCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: VNYCTVKLGDQAQSPIVSTLSIQ*SISSSS Trigger: CGAAGAGGAGGAAATAGACAACTGAATGGAGAGAGT...GGAAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGAAATAAGTAAGAGGAGGAGAAAGCCGGGCTGGGAAGCAGAAGCCAGAGAGTGGGAAGAGTTCTTTTaGATCTTTCTGGTCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DEISKRRRKPGWEAEAREWEEFF*IFLVSF Trigger: AAAGCTGACCAGAAAGATCAAAAAGAACTCTTCCCA...CTCTCTGGCTTCTGCTTCCCAGCCCGGCTTTCTCCTCCTCTTACTTATTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTTTCATTGCGAAGTTATaGGCACTGCTCCAGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: WSTTVQSNWVTRLKAPLFFIAKL*ALLQNV Trigger: CACATTCTGGAGCAGTGCCAATAACTTCGCAATGAA...AAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACACTCTCTGCTTTTGTCTaGCTCTTCGGAATCCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGALNGEKERPTDTFEATLSAFV*LFGILF Trigger: AAAAAGGATTCCGAAGAGCAAGACAAAAGCAGAGAG...TGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR TCA 72 bp | TTCATTGCGAAGTTATTGGCACTGCTCCAGAATGTGTaGCAACTGGAAGAGAGCCGTAAGTCGCTCTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: FIAKLLALLQNV*QLEESRKSLST Trigger: AGTAGAGAGCGACTTACGGCTCTCTTCCAGTTGTCACACATTCTGGAGCAGTGCCAATAACTTCGCAATGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTCCGAATTGGCACCTTTTTaGACAGATTCTAATCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: VNYCTVKLGDQAQSPIVSELAPF*TDSNQH Trigger: GTGTTGATTAGAATCTGTCAAAAAAGGTGCCAATTC...GGAAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR TCA 72 bp | AATAAAGTCTCTGGAACTTGTTATGAGCCCAGGGAATaGAAAGCAGCAGCCATAAGTCTGGGAGATGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: NKVSGTCYEPRE*KAAAISLGDGS Trigger: AGATCCATCTCCCAGACTTATGGCTGCTGCTTTTCATTCCCTGGGCTCATAACAAGTTCCAGAGACTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CCA 72 bp | GAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTaGAATATGACATATGTTATCAGAGTCCCTAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: EIRTKESEDLAL*NMTYVIRVPRL Trigger: TAGTCTAGGGACTCTGATAACATATGTCATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCAGGATCTGGCGGCGCGGGAGATaGCGCTTCGGGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRWLCLAGKAFTQTCLRIWRRGR*RFGPPW Trigger: CCAAGGAGGCCCGAAGCGCCATCTCCCGCGCCGCCA...GATCCTGAGACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGTGCCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCCCTCCTTGGAGATGTTaGCACCGTCCGGGAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSAEDGSALQGKPSHRHVPPWRC*HRPGAP Trigger: AGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGG...GACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCTGGTCAGCTTTTATTTTGATCTCAGGCACCAGTGCCGAAGATGGCTCTGGCGGCGCGGGAGATaGCGCTTCGGGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLVSFYFDLRHQCRRWLWRRGR*RFGPPW Trigger: CCAAGGAGGCCCGAAGCGCCATCTCCCGCGCCGCCA...GAGCCATCTTCGGCACTGGTGCCTGAGATCAAAATAAAAGCTGACCAGAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGACATTTCCTCGTTCGCTCGCTCACAGCTCCTTAGTCATCTCCTAGAGACAAAACGAAGACACTaGCGGCGCGGGAGATGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GEDISSFARSQLLSHLLETKRRH*RRGRWR Trigger: GCGCCATCTCCCGCGCCGCCAGTGTCTTCGTTTTGT...CTCTAGGAGATGACTAAGGAGCTGTGAGCGAGCGAACGAGGAAATGTCTTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CAA 72 bp | CCACCACGCCACAGTCTGCCTACTCTCTCCATTCAGTaGTCTATTTCCTCCTCTTCGTTCTGGTCGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPRHSLPTLSIQ*SISSSSFWSSS Trigger: CGAGGACGACCAGAACGAAGAGGAGGAAATAGACAACTGAATGGAGAGAGTAGGCAGACTGTGGCGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| CDS-3UTR CCA 90 bp | GCTACATTCCTGAGCACCATTCCTCTTACCGTAAGGTTCAGAGGTGTTCTCAACACAAAACGAAGACACTaGCGGCGCGGGAGATGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ATFLSTIPLTVRFRGVLNTKRRH*RRGRWR Trigger: GCGCCATCTCCCGCGCCGCCAGTGTCTTCGTTTTGT...GTTGAGAACACCTCTGAACCTTACGGTAAGAGGAATGGTGCTCAGGAATGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATACCTCCTTGGAGATGTTaGCACCGTCCGGGAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEGRRLGLRNLRTLHFGIPPWRC*HRPGAP Trigger: AGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGG...TATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| 3UTR CAA 72 bp | TCCATCTCTTCCATGGCTGACAGCACGTCACTGGCATaGAGAGTCTTGCGCTTTCCTTTCATTGCGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SISSMADSTSLA*RVLRFPFIAKL Trigger: TAACTTCGCAATGAAAGGAAAGCGCAAGACTCTCAATGCCAGTGACGTGCTGTCAGCCATGGAAGAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTCCTTGTCCTTCTTCTTTTaGTCCGAAGCCTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNYCTVKLGDQAQSPIVSLSFFF*SEASFL Trigger: CAAGAAGGAGGCTTCGGAGCAAAAGAAGAAGGACAA...GGAAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATCCTCCTCTTCGTTCTaGTCGTCCTCGTCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGRRLGLRNLRTLHFGISSSSF*SSSSSL Trigger: GAGACTGGACGAGGACGACCAGAACGAAGAGGAGGA...TATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR CCA 90 bp | CTACCATCAGGTGAAGACATTTCCTCGTTCGCTCGCTCACAGCTCCTTAGTCATGGTGTTATGAATCGCTaGAATTCCATCTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPSGEDISSFARSQLLSHGVMNR*NSISSM Trigger: CATGGAAGAGATGGAATTCCAGCGATTCATAACACC...ATGACTAAGGAGCTGTGAGCGAGCGAACGAGGAAATGTCTTCACCTGATGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR TCA 90 bp | TTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCTCAAGTGCACCATCTCTTCCATGGCTaGCAGCACGTCACTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLVNSVQLYYITCQPQVHHLFHG*QHVTGI Trigger: AATGCCAGTGACGTGCTGTCAGCCATGGAAGAGATG...GTGCACTTGAGGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATGGCGCTTTCCTTTCATTaGGAAGTTATTGGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRQEIRTKESEDLALWNMALSFH*EVIGTG Trigger: TCCTGTGCCAATAACTTCGCAATGAAAGGAAAGCGC...CATATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR CCA 90 bp | TTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCTCAAGTGCACATTCCATCTCTTCCATaGCTGACAGCACGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVNSVQLYYITCQPQVHIPSLP*LTARHW Trigger: CCAGTGACGTGCTGTCAGCCATGGAAGAGATGGAAT...GTGCACTTGAGGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGCCTGTAGGTTCCAGGCCACGAACGCGGGGTCAGGATCCCGCTGCGCCGCGCTTCGGGCCTCCTaGGAGATGTTGACACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGACRFQATNAGSGSRCAALRAS*EMLTPS Trigger: GGACGGTGTCAACATCTCCAAGGAGGCCCGAAGCGC...GGCGCAGCGGGATCCTGACCCCGCGTTCGTGGCCTGGAACCTACAGGCCCCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128100.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGCCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCGCGCTTCGGGCCTCCTaGGAGATGTTGACACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSAEDGSALQGKPSHRHVALRAS*EMLTPS Trigger: GGACGGTGTCAACATCTCCAAGGAGGCCCGAAGCGC...GACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGCCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCACACAGACATGTCTCCGGGAGCGCCTCCTaGATGATCCTGGTGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: TSAEDGSALQGKPSHRHVSGSAS*MILVMT Trigger: CGTCATCACCAGGATCATCAAGGAGGCGCTCCCGGA...GACATGTCTGTGTGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTGCCTCCTTGGAGATGTaGACACCGTCCGGGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSTTVQSNWVTRLKAPLFASLEM*TPSGSA Trigger: GGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGC...AAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGCACTCAATGGGGAAAAAGAAAGGCCAACAGACACGTTCGAAGCCACACTGGTGATGACGGCGTaGGGCAGATTTAGGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGALNGEKERPTDTFEATLVMTA*GRFRSS Trigger: CGAGGACCTAAATCTGCCCAACGCCGTCATCACCAG...TGTGGCTTCGAACGTGTCTGTTGGCCTTTCTTTTTCCCCATTGAGTGCTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCCAGAGAGATGGAGACAGAACAGGCTGTGCCTGGAAGAAATAAAGTCTTCCGGGAGCGCCTCCTaGATGATCCTGGTGATGACG | + |
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Preference number: 5 (lower is better) Translates to: QKPERWRQNRLCLEEIKSSGSAS*MILVMT Trigger: CGTCATCACCAGGATCATCAAGGAGGCGCTCCCGGA...AGACTTTATTTCTTCCAGGCACAGCCTGTTCTGTCTCCATCTCTCTGGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTCAGGCACCAGTGCCGAAGATGGCTCTGCCTTGCAGGGAAAGCCTTCATCCTCCTCTCTGCTTTaGTCTTGCTCTTCGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: LISGTSAEDGSALQGKPSSSSLL*SCSSES Trigger: GGATTCCGAAGAGCAAGACAAAAGCAGAGAGGAGGA...TGAAGGCTTTCCCTGCAAGGCAGAGCCATCTTCGGCACTGGTGCCTGAGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTGTGCCTGGAAGAAATAAAGTCTCTGGAACTTGTTATGAGCCCAGGGAACTGGTGATGACGGCGTaGGGCAGATTTAGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: QAVPGRNKVSGTCYEPRELVMTA*GRFRSS Trigger: CGAGGACCTAAATCTGCCCAACGCCGTCATCACCAG...TTCCCTGGGCTCATAACAAGTTCCAGAGACTTTATTTCTTCCAGGCACAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| CDS-3UTR CAA 90 bp | CTAGAGAGCAGCCATTCTAAGCACGAGTTCCTATGGTCAACTACTGTACAGTCATGCGCTTTCCTTTCATaGCGAAGTTATTGGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: LESSHSKHEFLWSTTVQSCAFLS*RSYWHR Trigger: CCTGTGCCAATAACTTCGCAATGAAAGGAAAGCGCA...TGACTGTACAGTAGTTGACCATAGGAACTCGTGCTTAGAATGGCTGCTCTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAACTACTGTACAGTCAAACTGGGTGACCAGGCTCAAAGCCCCATTGTTTCTCTCTGCTTTTGTCTaGCTCTTCGGAATCCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: WSTTVQSNWVTRLKAPLFLSAFV*LFGILF Trigger: AAAAAGGATTCCGAAGAGCAAGACAAAAGCAGAGAG...AAACAATGGGGCTTTGAGCCTGGTCACCCAGTTTGACTGTACAGTAGTTGACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS-3UTR CAA 90 bp | TTAGAAGGCAGGAGATTAGGACTAAGGAATCTGAGGACCTTGCACTTTGGAATATTCATTGCGAAGTTATaGGCACAGGATGTGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: LEGRRLGLRNLRTLHFGIFIAKL*AQDVAY Trigger: GTATGCCACATCCTGTGCCAATAACTTCGCAATGAA...TATTCCAAAGTGCAAGGTCCTCAGATTCCTTAGTCCTAATCTCCTGCCTTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS-3UTR CAA 90 bp | CTTCCCTGTATTACTAGTAAACAGTGTCCAACTATATTACATCACCTGTCAGCCTTTGTCCTTCTTCTTTaGCTCCGAAGCCTCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LPCITSKQCPTILHHLSAFVLLL*LRSLLL Trigger: AAGAAGGAGGCTTCGGAGCAAAAGAAGAAGGACAAA...GGCTGACAGGTGATGTAATATAGTTGGACACTGTTTACTAGTAATACAGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS CAA 72 bp | GCGCGGGAGATGGCGCTTCGGGCCTCCTTGGAGATGTaGACACCGTCCGGGAGCGCCTCCTTGATGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: AREMALRASLEM*TPSGSASLMIL Trigger: CAGGATCATCAAGGAGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGAAGCGCCATCTCCCGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| CDS CAA 90 bp | AAAACGAAGACACTGGCGGCGCGGGAGATGGCGCTTCGGGCCTCCTaGGAGATGTTGACACCGTCCGGGAGCGCCTCCTTGATGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: KTKTLAAREMALRAS*EMLTPSGSASLMIL Trigger: CAGGATCATCAAGGAGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGAAGCGCCATCTCCCGCGCCGCCAGTGTCTTCGTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030091.10 ENSMUST00000128100.2 |
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| CDS CCA 72 bp | TATTGGCACAGGATGTGGCATACAAAACGAAGACACTaGCGGCGCGGGAGATGGCGCTTCGGGCCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: YWHRMWHTKRRH*RRGRWRFGPPW Trigger: CCAAGGAGGCCCGAAGCGCCATCTCCCGCGCCGCCAGTGTCTTCGTTTTGTATGCCACATCCTGTGCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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| CDS CAA 90 bp | TCCATCTCTTCCATGGCTGACAGCACGTCACTGGCATTGAGAGTCTaGCGCTTTCCTTTCATTGCGAAGTTATTGGCACAGGATGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SISSMADSTSLALRV*RFPFIAKLLAQDVA Trigger: TGCCACATCCTGTGCCAATAACTTCGCAATGAAAGGAAAGCGCAAGACTCTCAATGCCAGTGACGTGCTGTCAGCCATGGAAGAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030091.10 |
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