Pregenerated sensors for POLE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020974Ensembl transcript IDs: ENSMUST00000021359.7, ENSMUST00000221411.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGAGCCTTGTCTGCAATaGCCAGCAGGTCGGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVEPCLQ*PAGRAP Trigger: CGGTGCCCGACCTGCTGGTCATTGCAGACAAGGCTC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAGTACGCCCTTGTGGTaGTGGAGGGCTCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVSTPLW*WRAQWE Trigger: CTCCCACTGAGCCCTCCAGCACCACAAGGGCGTACT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCACGCCCTTGTGGTGCTaGAGGGCTCAGTGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVTPLWC*RAQWEE Trigger: TTCCTCCCACTGAGCCCTCCAGCACCACAAGGGCGT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCATAGTACGCCCTTGTaGTGCTGGAGGGCTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVHSTPL*CWRAQW Trigger: CCACTGAGCCCTCCAGCACCACAAGGGCGTACTATG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTGCTGGAGGGCTCAGTaGGAGGAAATCCAAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVCWRAQ*EEIQRH Trigger: ATGCCTTTGGATTTCCTCCCACTGAGCCCTCCAGCA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCACTTTCTTCAAGGTGTaGGCCTATCACCGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVTFFKV*AYHRRS Trigger: ACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGCAGGTTGGAGGTGCTaGCGAGTAACCAGAAAACAT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVAGWRC*RVTRKH Trigger: ATGTTTTCTGGTTACTCGCCAGCACCTCCAACCTGC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCAGAATAAAGCAGGTTaGAGGTGCTGGCGAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVQNKAG*RCWRVT Trigger: GGTTACTCGCCAGCACCTCCAACCTGCTTTATTCTG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCTATCACCGGAGGAGTaGACAATTCATGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVLSPEE*TIHVCV Trigger: CACACAGACATGAATTGTTCACTCCTCCGGTGATAG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTTCGAGGACAAGGGCTaGTTTTCAACTGCATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVFEDKG*FSTASM Trigger: CATCGATGCAGTTGAAAAGCAGCCCTTGTCCTCGAA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAAAGCAGGTTGGAGGTaGTGGCGAGTAACCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVKAGWR*WRVTRK Trigger: TTTTCTGGTTACTCGCCAGCACCTCCAACCTGCTTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAAATCCAGGATCCTCTaGGCCAGGCACAAACACAAA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVKSRIL*ARHKHK Trigger: TTTGTGTTTGTGCCTGGCCCAGAGGATCCTGGATTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGCGGCCTTGGTAAAATaGAACCAAATCCAGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVAALVK*NQIQDP Trigger: AGGATCCTGGATTTGGTTCCATTTTACCAAGGCCGC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAAGGTTGGTGCAGCATaGTTAGTCATGGATAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVKVGAA*LVMDRG Trigger: TCCTCTATCCATGACTAATCATGCTGCACCAACCTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTCCAACACTTGCACTTaGTCCAACCAAACATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVSNTCT*SNQTSD Trigger: GTCTGATGTTTGGTTGGACCAAGTGCAAGTGTTGGA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTGCAAATCCACTTCTTaGAAAGGAGCCTTGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVCKSTS*KGALSA Trigger: TGCAGACAAGGCTCCTTTCCAAGAAGTGGATTTGCA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTTTCAACTGCATCGATaGTCTTTCCTAGGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVFQLHR*SFLGSP Trigger: AGGAGAACCTAGGAAAGATCATCGATGCAGTTGAAA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCACCAACTTTGCTTGTaGTACCCAGTAAGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVHQLCL*YPVRFL Trigger: TAGAAACCTTACTGGGTAGCACAAGCAAAGTTGGTG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAACTTCTCCAACACTTaGACTTGGTCCAACCAAACA | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVNFSNT*TWSNQT Trigger: TGTTTGGTTGGACCAAGTGCAAGTGTTGGAGAAGTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCCAGAAAACATTACATaGAACTTCTCCAACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVPENIT*NFSNTC Trigger: GCAAGTGTTGGAGAAGTTTCATGTAATGTTTTCTGG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR TCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCATTAGTCGTGAAAACTaGAAACGGAACCCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVISREN*KRNPLS Trigger: AGACAAAGGGTTCCGTTTTCAGTTTTCACGACTAAT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGAAATCCAAAGGCATTaGCGTGAAACACTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVEIQRH*RETLDL Trigger: AAGATCAAGTGTTTCACGCCAATGCCTTTGGATTTC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCACACAATCACAAACATaGCGTCCTTGTTCTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: ENSFHIFSSISKALKFAVTQSQT*RPCSHL Trigger: AAGATGAGAACAAGGACGCCATGTTTGTGATTGTGT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS GCA 90 bp | GACCAGCAGGTCGGGCACCGGGTACACTCTCAACGTGTAATCATATaGCCAGTGGACGGGGCATACGTAAAGAGGGAGAGGAGCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: DQQVGHRVHSQRVII*PVDGAYVKRERSQM Trigger: CATCTGGCTCCTCTCCCTCTTTACGTATGCCCCGTCCACTGGGCATATGATTACACGTTGAGAGTGTACCCGGTGCCCGACCTGCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS GCA 90 bp | GCAGAGGCAATCGGTGTTGGTCACGGTGAACGGGTCGTACTTGTCTaGAATGACCAGCAGGTCGGGCACCGGGTACACTCTCAACGTGTA | + |
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Preference number: 5 (lower is better) Translates to: AEAIGVGHGERVVLV*NDQQVGHRVHSQRV Trigger: TACACGTTGAGAGTGTACCCGGTGCCCGACCTGCTGGTCATTGCAGACAAGTACGACCCGTTCACCGTGACCAACACCGATTGCCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021359.7 |
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| CDS GCA 90 bp | GTGCTCTATAGTCTCATCCATAGACTGACTGCACTCTTGCACAGCTaGCTCCACGACAGATCGTTCGATCATGTTCGAGGACAAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VLYSLIHRLTALLHS*LHDRSFDHVRGQGL Trigger: CAGCCCTTGTCCTCGAACATGATCGAACGATCTGTCGTGGAGGCAGCTGTGCAAGAGTGCAGTCAGTCTATGGATGAGACTATAGAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 90 bp | TCTGCCAGGACGAAGCAGGCCTCGGTGTATAAGCCACTGTGGAACTaGGCTTTACTAAGGTCCAGTTGTACTGTTCCAGTAGGATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SARTKQASVYKPLWN*ALLRSSCTVPVGSS Trigger: GGAAGATCCTACTGGAACAGTACAACTGGACCTTAGTAAAGCTCAGTTCCACAGTGGCTTATACACCGAGGCCTGCTTCGTCCTGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS GCA 90 bp | GCTGCCTCCACGACAGATCGTTCGATCATGTTCGAGGACAAGGGCTaGTTTTCAACTGCATCGATGATCTTTCCTAGGTTCTCCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: AASTTDRSIMFEDKG*FSTASMIFPRFSSS Trigger: GCTAGAGGAGAACCTAGGAAAGATCATCGATGCAGTTGAAAAGCAGCCCTTGTCCTCGAACATGATCGAACGATCTGTCGTGGAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 90 bp | ACTTGCTCCCACTTTCTTCAAGGTGTGAGCCTATCACCGGAGGAGTaGACAATTCATGTCTGTGTGTCCTCTGGTGTAAAATGGTATAGC | + |
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Preference number: 5 (lower is better) Translates to: TCSHFLQGVSLSPEE*TIHVCVSSGVKWYS Trigger: GCTATACCATTTTACACCAGAGGACACACAGACATGAATTGTTCACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGTGGGAGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAGCAAGCCCCGCAGCTaGAAAGCTGAGACCGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVSKPRS*KAETVR Trigger: CCGCACGGTCTCAGCTTTCAAGCTGCGGGGCTTGCT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS CCA 90 bp | ACACTTGCACTTGGTCCAACCAAACATCAGACACAATCACAAACATaGCGTCCTTGTTCTCATCTTCCAGCTGTCTCAGCTTTGTATACG | + |
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Preference number: 5 (lower is better) Translates to: TLALGPTKHQTQSQT*RPCSHLPAVSALYT Trigger: CGTATACAAAGCTGAGACAGCTGGAAGATGAGAACAAGGACGCCATGTTTGTGATTGTGTCTGATGTTTGGTTGGACCAAGTGCAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 90 bp | TTCTATAGTTTTAAGCTGGAACTTGCTCCCACTTTCTTCAAGGTGTaGGCCTATCACCGGAGGAGTGAACAATTCATGTCTGTGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: FYSFKLELAPTFFKV*AYHRRSEQFMSVCP Trigger: AGGACACACAGACATGAATTGTTCACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGTGGGAGCAAGTTCCAGCTTAAAACTATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CCA 90 bp | CCAGGATCCTCTGGGCCAGGCACAAACACAAAACGGCTACTTTGGTaGATACTTGGATATTCACAAATTATGTCTGCCAAAGATTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: PGSSGPGTNTKRLLW*ILGYSQIMSAKDFR Trigger: CCTAAAATCTTTGGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGATCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CCA 90 bp | AATCCAGGATCCTCTGGGCCAGGCACAAACACAAAACGGCTACTTTaGTGGATACTTGGATATTCACAAATTATGTCTGCCAAAGATTTT | + |
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Preference number: 5 (lower is better) Translates to: NPGSSGPGTNTKRLL*WILGYSQIMSAKDF Trigger: AAAATCTTTGGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGATCCTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCAGCGAGTGGCGGCCTaGGTAAAATGGAACCAAATC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVQRVAA*VKWNQI Trigger: GATTTGGTTCCATTTTACCAAGGCCGCCACTCGCTG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGCTCGGCTTTGTCTCTaGCTGTTCCAAATAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVARLCL*LFQIRL Trigger: CAACCTTATTTGGAACAGCAAGAGACAAAGCCGAGC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCATCACGTCACCAACTTaGCTTGTGCTACCCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVITSPT*LVLPSK Trigger: CTTACTGGGTAGCACAAGCAAAGTTGGTGACGTGAT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCACAAACATGGCGTCCTaGTTCTCATCTTCCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVTNMAS*FSSSSC Trigger: ACAGCTGGAAGATGAGAACAAGGACGCCATGTTTGT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCATGCAAATCCACTTCTaGGAAAGGAGCCTTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVMQIHF*ERSLVC Trigger: GCAGACAAGGCTCCTTTCCAAGAAGTGGATTTGCAT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCGTTTTAAGCTGGAACTaGCTCCCACTTTCTTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVVLSWN*LPLSSR Trigger: CCTTGAAGAAAGTGGGAGCAAGTTCCAGCTTAAAAC...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAAACTTCTCCAACACTaGCACTTGGTCCAACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVKLLQH*HLVQPN Trigger: GTTTGGTTGGACCAAGTGCAAGTGTTGGAGAAGTTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCTTTACTAAGGTCCAGTaGTACTGTTCCAGTAGGATC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVFTKVQ*YCSSRI Trigger: GATCCTACTGGAACAGTACAACTGGACCTTAGTAAA...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCATTGGCGTGAAACACTaGATCTTCAAACCAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVIGVKH*IFKPTF Trigger: GAAGGTTGGTTTGAAGATCAAGTGTTTCACGCCAAT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCCACAAAACGGCTACTTaGGTGGATACTTGGATATTC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVHKTAT*VDTWIF Trigger: GAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTG...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTCATTTCATATATTCTCATCGATCTCAAAAGCCCTGAAGTTTGCTGTCAAAGCTCCAATGATATaGAAAACGTGCTCTATAGTC | + |
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Preference number: 5 (lower is better) Translates to: ENSFHIFSSISKALKFAVKAPMI*KTCSIV Trigger: GACTATAGAGCACGTTTTCAATATCATTGGAGCTTT...GACAGCAAACTTCAGGGCTTTTGAGATCGATGAGAATATATGAAATGAATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS TCA 72 bp | TTCACTCCTGAGCAGCAAGCCCCGCAGCTTGAAAGCTaGGACCGTGCGGCTCCGCAGCCGCTCCGGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: FTPEQQAPQLES*DRAAPQPLRRH Trigger: ATGGCGCCGGAGCGGCTGCGGAGCCGCACGGTCTCAGCTTTCAAGCTGCGGGGCTTGCTGCTCAGGAGTGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | TTGGTGGCTTCACTCCTGAGCAGCAAGCCCCGCAGCTaGAAAGCTGAGACCGTGCGGCTCCGCAGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVASLLSSKPRS*KAETVRLRSRS Trigger: GGAGCGGCTGCGGAGCCGCACGGTCTCAGCTTTCAAGCTGCGGGGCTTGCTGCTCAGGAGTGAAGCCACCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | AGGCAATCGGTGTTGGTCACGGTGAACGGGTCGTACTaGTCTGCAATGACCAGCAGGTCGGGCACCGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RQSVLVTVNGSY*SAMTSRSGTGY Trigger: GTACCCGGTGCCCGACCTGCTGGTCATTGCAGACAAGTACGACCCGTTCACCGTGACCAACACCGATTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021359.7 |
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| CDS GCA 72 bp | GTCGGGCACCGGGTACACTCTCAACGTGTAATCATATaGCCAGTGGACGGGGCATACGTAAAGAGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGHRVHSQRVII*PVDGAYVKRER Trigger: CCTCTCCCTCTTTACGTATGCCCCGTCCACTGGGCATATGATTACACGTTGAGAGTGTACCCGGTGCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 90 bp | TTTATGCAGAGGCAATCGGTGTTGGTCACGGTGAACGGGTCGTACTaGTCTGCAATGACCAGCAGGTCGGGCACCGGGTACACTCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FMQRQSVLVTVNGSY*SAMTSRSGTGYTLN Trigger: GTTGAGAGTGTACCCGGTGCCCGACCTGCTGGTCATTGCAGACAAGTACGACCCGTTCACCGTGACCAACACCGATTGCCTCTGCATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021359.7 |
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| CDS TCA 72 bp | GCAAATCCACTTCTTGGAAAGGAGCCTTGTCTGCAATaGCCAGCAGGTCGGGCACCGGGTACACTCTCAACG | + |
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Preference number: 6 (lower is better) Translates to: ANPLLGKEPCLQ*PAGRAPGTLST Trigger: CGTTGAGAGTGTACCCGGTGCCCGACCTGCTGGTCATTGCAGACAAGGCTCCTTTCCAAGAAGTGGATTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221411.2 |
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| CDS CAA 72 bp | AATTCAGTGACAGACTGGAGAGCTTCAGTCAGATACTaGGTGGCTTCACTCCTGAGCAGCAAGCCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NSVTDWRASVRY*VASLLSSKPRS Trigger: GCTGCGGGGCTTGCTGCTCAGGAGTGAAGCCACCAAGTATCTGACTGAAGCTCTCCAGTCTGTCACTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 90 bp | TCTAGCTCCAATTCAGTGACAGACTGGAGAGCTTCAGTCAGATACTaGGTGGCTTCACTCCTGAGCAGCAAGCCCCGCAGCTTGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSNSVTDWRASVRY*VASLLSSKPRSLKA Trigger: AGCTTTCAAGCTGCGGGGCTTGCTGCTCAGGAGTGAAGCCACCAAGTATCTGACTGAAGCTCTCCAGTCTGTCACTGAATTGGAGCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS GCA 72 bp | AGTCTCATCCATAGACTGACTGCACTCTTGCACAGCTaGCTCCACGACAGATCGTTCGATCATGTTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLIHRLTALLHS*LHDRSFDHVRG Trigger: TCCTCGAACATGATCGAACGATCTGTCGTGGAGGCAGCTGTGCAAGAGTGCAGTCAGTCTATGGATGAGACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CCA 72 bp | CCTAGGTTCTCCTCTAGCTCCAATTCAGTGACAGACTaGAGAGCTTCAGTCAGATACTTGGTGGCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: PRFSSSSNSVTD*RASVRYLVASL Trigger: GAGTGAAGCCACCAAGTATCTGACTGAAGCTCTCCAGTCTGTCACTGAATTGGAGCTAGAGGAGAACCTAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | GTGCTCTATAGTCTCATCCATAGACTGACTGCACTCTaGCACAGCTGCCTCCACGACAGATCGTTCGATCAT | + |
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Preference number: 6 (lower is better) Translates to: VLYSLIHRLTAL*HSCLHDRSFDH Trigger: ATGATCGAACGATCTGTCGTGGAGGCAGCTGTGCAAGAGTGCAGTCAGTCTATGGATGAGACTATAGAGCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | ACGAAGCAGGCCTCGGTGTATAAGCCACTGTGGAACTaGGCTTTACTAAGGTCCAGTTGTACTGTTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: TKQASVYKPLWN*ALLRSSCTVPV Trigger: TACTGGAACAGTACAACTGGACCTTAGTAAAGCTCAGTTCCACAGTGGCTTATACACCGAGGCCTGCTTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 90 bp | ATTGAAAACGTGCTCTATAGTCTCATCCATAGACTGACTGCACTCTaGCACAGCTGCCTCCACGACAGATCGTTCGATCATGTTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: IENVLYSLIHRLTAL*HSCLHDRSFDHVRG Trigger: TCCTCGAACATGATCGAACGATCTGTCGTGGAGGCAGCTGTGCAAGAGTGCAGTCAGTCTATGGATGAGACTATAGAGCACGTTTTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | TGTTCGAGGACAAGGGCTGCTTTTCAACTGCATCGATaGTCTTTCCTAGGTTCTCCTCTAGCTCCAATTCAG | + |
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Preference number: 6 (lower is better) Translates to: CSRTRAAFQLHR*SFLGSPLAPIQ Trigger: CTGAATTGGAGCTAGAGGAGAACCTAGGAAAGATCATCGATGCAGTTGAAAAGCAGCCCTTGTCCTCGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS GCA 72 bp | ACGACAGATCGTTCGATCATGTTCGAGGACAAGGGCTaGTTTTCAACTGCATCGATGATCTTTCCTAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: TTDRSIMFEDKG*FSTASMIFPRF Trigger: GAACCTAGGAAAGATCATCGATGCAGTTGAAAAGCAGCCCTTGTCCTCGAACATGATCGAACGATCTGTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 90 bp | TCTTTCAGCTGGGTTATCATCCCCAGGACGATCACGTCACCAACTTaGCTTGTGCTACCCAGTAAGGTTTCTATAGTTTTAAGCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SFSWVIIPRTITSPT*LVLPSKVSIVLSWN Trigger: GTTCCAGCTTAAAACTATAGAAACCTTACTGGGTAGCACAAGCAAAGTTGGTGACGTGATCGTCCTGGGGATGATAACCCAGCTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | ATATTGAAAACGTGCTCTATAGTCTCATCCATAGACTaGCTGCACTCTTGCACAGCTGCCTCCACGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: ILKTCSIVSSID*LHSCTAASTTD Trigger: ATCTGTCGTGGAGGCAGCTGTGCAAGAGTGCAGTCAGTCTATGGATGAGACTATAGAGCACGTTTTCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | CACTTTCTTCAAGGTGTGAGCCTATCACCGGAGGAGTaGACAATTCATGTCTGTGTGTCCTCTGGTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: HFLQGVSLSPEE*TIHVCVSSGVK Trigger: TTTTACACCAGAGGACACACAGACATGAATTGTTCACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | TTTAAGCTGGAACTTGCTCCCACTTTCTTCAAGGTGTaGGCCTATCACCGGAGGAGTGAACAATTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: FKLELAPTFFKV*AYHRRSEQFMS Trigger: AGACATGAATTGTTCACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGTGGGAGCAAGTTCCAGCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CCA 72 bp | TCCTCTGGGCCAGGCACAAACACAAAACGGCTACTTTaGTGGATACTTGGATATTCACAAATTATGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSGPGTNTKRLL*WILGYSQIMSA Trigger: GGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | CTACCCAGTAAGGTTTCTATAGTTTTAAGCTGGAACTaGCTCCCACTTTCTTCAAGGTGTGAGCCTATCACC | + |
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Preference number: 6 (lower is better) Translates to: LPSKVSIVLSWN*LPLSSRCEPIT Trigger: GGTGATAGGCTCACACCTTGAAGAAAGTGGGAGCAAGTTCCAGCTTAAAACTATAGAAACCTTACTGGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | TGGGTTATCATCCCCAGGACGATCACGTCACCAACTTaGCTTGTGCTACCCAGTAAGGTTTCTATAGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: WVIIPRTITSPT*LVLPSKVSIVL Trigger: TAAAACTATAGAAACCTTACTGGGTAGCACAAGCAAAGTTGGTGACGTGATCGTCCTGGGGATGATAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | ATCCTCTGGGCCAGGCACAAACACAAAACGGCTACTTaGGTGGATACTTGGATATTCACAAATTATGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ILWARHKHKTAT*VDTWIFTNYVC Trigger: GCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CCA 72 bp | TCTGGGCCAGGCACAAACACAAAACGGCTACTTTGGTaGATACTTGGATATTCACAAATTATGTCTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SGPGTNTKRLLW*ILGYSQIMSAK Trigger: TTTGGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 90 bp | AAATCCAGGATCCTCTGGGCCAGGCACAAACACAAAACGGCTACTTaGGTGGATACTTGGATATTCACAAATTATGTCTGCCAAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: KSRILWARHKHKTAT*VDTWIFTNYVCQRF Trigger: AAATCTTTGGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGATCCTGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | GTAACCAGAAAACATTACATGAAACTTCTCCAACACTaGCACTTGGTCCAACCAAACATCAGACACAATCAC | + |
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Preference number: 6 (lower is better) Translates to: VTRKHYMKLLQH*HLVQPNIRHNH Trigger: GTGATTGTGTCTGATGTTTGGTTGGACCAAGTGCAAGTGTTGGAGAAGTTTCATGTAATGTTTTCTGGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS TCA 72 bp | ACAATACTGAATTCTGCAAGGATTAGTCGTGAAAACTaGAAACGGAACCCTTTGTCTGAATTCCTGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TILNSARISREN*KRNPLSEFLCD Trigger: ATCACACAGGAATTCAGACAAAGGGTTCCGTTTTCAGTTTTCACGACTAATCCTTGCAGAATTCAGTATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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| CDS CAA 72 bp | CAGGCACAAACACAAAACGGCTACTTTGGTGGATACTaGGATATTCACAAATTATGTCTGCCAAAGATTTTA | + |
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Preference number: 6 (lower is better) Translates to: QAQTQNGYFGGY*DIHKLCLPKIL Trigger: TAAAATCTTTGGCAGACATAATTTGTGAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021359.7 ENSMUST00000221411.2 |
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