Pregenerated sensors for POLDIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001100Ensembl transcript IDs: ENSMUST00000001127.11, ENSMUST00000133601.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCTATAGTCAGGTCAGTCCAACTCTACACTGGCCTCCTCTACACTaGGCGGAGGGTAGAGAGACCCGGAACTTAGTCCAGTGCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: VYSQVSPTLHWPPLH*AEGRETRNLVQCCS Trigger: TGAGCAGCACTGGACTAAGTTCCGGGTCTCTCTACCCTCCGCCCAGTGTAGAGGAGGCCAGTGTAGAGTTGGACTGACCTGACTATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR TCA 90 bp | TTCTTAGGGCCAACCTGGGCCTCAGCTGGCCTACCAGTGAAGGCCTaGGGGTGGGGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: FLGPTWASAGLPVKA*GWGLLIFIAFQGEW Trigger: CCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACCCCACCCTCAGGCCTTCACTGGTAGGCCAGCTGAGGCCCAGGTTGGCCCTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR GCA 90 bp | ATGTGCCCCACATGTGCCCACTGGAAGCTTGCAGAGAGACATGGCTaGTATACTGGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: MCPTCAHWKLAERHG*YTGMQAAPWITLVP Trigger: GGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CCA 90 bp | TATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTaGCCTACCAGTGAAGGCCTGAGGGTGGGGTCTTCTCATCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: YGLRAVVLRANLGLS*PTSEGLRVGSSHLY Trigger: ATAAAGATGAGAAGACCCCACCCTCAGGCCTTCACTGGTAGGCCAGCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR GCA 90 bp | GAATTCCTGCCCCTGTGGTCTGGATGCTTGACAGGCTTTGCTCAATaGTCAGAAGCCCACAGTTCCCAGAAACCTGACTGGTTTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: EFLPLWSGCLTGFAQ*SEAHSSQKPDWFCL Trigger: GAGGCAAAACCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAAGCATCCAGACCACAGGGGCAGGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 90 bp | GGTCTCTCAAAACGAAATGTGCCCCACATGTGCCCACTGGAAGCTTaGAGAGAGACATGGCTGCTATACTGGAATGCAGGCTGCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: GLSKRNVPHMCPLEA*RETWLLYWNAGCSL Trigger: CAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGGGCACATTTCGTTTTGAGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CCA 90 bp | CACATGTGCCCACTGGAAGCTTGCAGAGAGACATGGCTGCTATACTaGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCGAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: HMCPLEACRETWLLY*NAGCSLDNTGSRSS Trigger: GGAACTTCGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR TCA 90 bp | GACAGGCTTTGCTCAATGCTCAGAAGCCCACAGTTCCCAGAAACCTaGCTGGTTTTGCCTCACTCTTCTCCAGGCCTAGTGAAGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: DRLCSMLRSPQFPET*LVLPHSSPGLVKPE Trigger: TTCTGGCTTCACTAGGCCTGGAGAAGAGTGAGGCAAAACCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 90 bp | AACTTAAGCTGCTTCTTGGCTGAATTCCTGCCCCTGTGGTCTGGATaGTTGACAGGCTTTGCTCAATGCTCAGAAGCCCACAGTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: NLSCFLAEFLPLWSG*LTGFAQCSEAHSSQ Trigger: CTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAAGCATCCAGACCACAGGGGCAGGAATTCAGCCAAGAAGCAGCTTAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CCA 90 bp | ACTGACCATAACTTAAGCTGCTTCTTGGCTGAATTCCTGCCCCTGTaGTCTGGATGCTTGACAGGCTTTGCTCAATGCTCAGAAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: TDHNLSCFLAEFLPL*SGCLTGFAQCSEAH Trigger: GTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAAGCATCCAGACCACAGGGGCAGGAATTCAGCCAAGAAGCAGCTTAAGTTATGGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CCA 90 bp | TCTTTATTGCTTTCCAAGGAGAATGGTGGGATCCGGACATCAAAGTaGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTGC | + |
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Preference number: 1 (lower is better) Translates to: SLLLSKENGGIRTSK*EPSGLSKRNVPHMC Trigger: GCACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCACCATTCTCCTTGGAAAGCAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR GCA 90 bp | AAGCTCCAAAAGCAGCTTGACTTGGTCACTGACCATAACTTAAGCTaGTTCTTGGCTGAATTCCTGCCCCTGTGGTCTGGATGCTTGACA | + |
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Preference number: 1 (lower is better) Translates to: KLQKQLDLVTDHNLS*FLAEFLPLWSGCLT Trigger: TGTCAAGCATCCAGACCACAGGGGCAGGAATTCAGCCAAGAAGCAGCTTAAGTTATGGTCAGTGACCAAGTCAAGCTGCTTTTGGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAGAGACCCGGAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAATGGAACGTGGTGTCCTaGACAGCGGCCAAGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GRETRNLVQCCSLLPVPQWNVVS*TAAKAN Trigger: GTTGGCCTTGGCCGCTGTCCAGGACACCACGTTCCA...TTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTCCGGGTCTCTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGAGACCCGGAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAAGCCAGCAAGGGGGCCTaGGACCCTGGAGACAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: GRETRNLVQCCSLLPVPQASKGA*DPGDKN Trigger: ATTTTTGTCTCCAGGGTCTCAGGCCCCCTTGCTGGC...TTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTCCGGGTCTCTCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR CCA 90 bp | GAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTCCCTGGAGACAAAAATaGCCGTGGTGGCCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ELSPVLLTVTSAPRCPASPWRQK*PWWPSE Trigger: CTCACTTGGCCACCACGGCCATTTTTGTCTCCAGGG...AGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCTGCCCACTGGAAGCTTaGAGAGAGACATGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: WDPDIKVGAIRSLKTKCACPLEA*RETWLL Trigger: TAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCA...GGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGACCCTGGAGACAAAAATGGCCGTGGTGGCCAAGTGAGCACTGGTTTATTGGCCAAGGCCAACCTTaGAGGAGTCTTATGTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LRPWRQKWPWWPSEHWFIGQGQP*RSLMWV Trigger: GACCCACATAAGACTCCTCCAAGGTTGGCCTTGGCC...AATAAACCAGTGCTCACTTGGCCACCACGGCCATTTTTGTCTCCAGGGTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTATGCAGGCTGCTCCTTaGATAACACTGGTTCCCGAA | + |
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Preference number: 2 (lower is better) Translates to: WWDPDIKVGAIRSLKTKCMQAAP*ITLVPE Trigger: TTCGGGAACCAGTGTTATCCAAGGAGCAGCCTGCAT...ACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CAA 90 bp | AATTTCACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTaGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: NFTVGRGLEFCSNYG*RAVVLRANLGLSWP Trigger: AGGCCAGCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGTGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CAA 90 bp | CCTGGAGACAAAAATGGCCGTGGTGGCCAAGTGAGCACTGGTTTATaGACCACACCTCACATTCCAGAAAACATGGGACAACTGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: PGDKNGRGGQVSTGL*TTPHIPENMGQLNS Trigger: ACTGTTCAGTTGTCCCATGTTTTCTGGAATGTGAGGTGTGGTCAATAAACCAGTGCTCACTTGGCCACCACGGCCATTTTTGTCTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CAA 90 bp | CAAAAGCAGCTTGACTTGGTCACTGACCATAACTTAAGCTGCTTCTaGGCTGAATTCCTGCCCCTGTGGTCTGGATGCTTGACAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QKQLDLVTDHNLSCF*AEFLPLWSGCLTGF Trigger: AAAGCCTGTCAAGCATCCAGACCACAGGGGCAGGAATTCAGCCAAGAAGCAGCTTAAGTTATGGTCAGTGACCAAGTCAAGCTGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCGTTCTGCAGCAATTATaGGTTGAGAGCTGTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: WDPDIKVGAIRSLKTKCAVLQQL*VESCCS Trigger: AGAACAACAGCTCTCAACCCATAATTGCTGCAGAAC...GGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGCCCACATGTGCCCACTaGAAGCTTGCAGAGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: GRGLEFCSNYGLRAVVLRPTCAH*KLAERH Trigger: ATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGG...CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGTTCCAAGGAGAATGGTaGGATCCGGACATCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GRGLEFCSNYGLRAVVLRFQGEW*DPDIKV Trigger: CACTTTGATGTCCGGATCCCACCATTCTCCTTGGAA...CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGTGGAGGAGTCTTATGTaGGTCTTCCAAGAAAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GRGLEFCSNYGLRAVVLRWRSLM*VFQEKL Trigger: TAACTTTTCTTGGAAGACCCACATAAGACTCCTCCA...CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGGAGTCTTATGTGGGTCTTCCAAGAAAAGTTACAATCTCCCTCCAAAAAGTTCTGCAGCAATTATaGGTTGAGAGCTGTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LEESYVGLPRKVTISLQKVLQQL*VESCCS Trigger: AGAACAACAGCTCTCAACCCATAATTGCTGCAGAAC...TTTTTGGAGGGAGATTGTAACTTTTCTTGGAAGACCCACATAAGACTCCTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| 3UTR TCA 72 bp | GCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTaGGGAAGGCGCACCCTAGCAGGGCCAGCAGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: AHCYQCPKMSSL*GRRTLAGPAAP Trigger: GGGAGCTGCTGGCCCTGCTAGGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | TGGGCGGAGGGTAGAGAGACCCGGAACTTAGTCCAGTaGTGCTCACTGTTACCAGTGCCCCAAGATGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: WAEGRETRNLVQ*CSLLPVPQDVQ Trigger: CTGGACATCTTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTCCGGGTCTCTCTACCCTCCGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CCA 72 bp | CAGGTCAGTCCAACTCTACACTGGCCTCCTCTACACTaGGCGGAGGGTAGAGAGACCCGGAACTTAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: QVSPTLHWPPLH*AEGRETRNLVQ Trigger: CTGGACTAAGTTCCGGGTCTCTCTACCCTCCGCCCAGTGTAGAGGAGGCCAGTGTAGAGTTGGACTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CCA 72 bp | GGGGGCCTGAGACCCTGGAGACAAAAATGGCCGTGGTaGCCAAGTGAGCACTGGTTTATTGACCACACCTCA | + |
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Preference number: 3 (lower is better) Translates to: GGLRPWRQKWPW*PSEHWFIDHTS Trigger: TGAGGTGTGGTCAATAAACCAGTGCTCACTTGGCCACCACGGCCATTTTTGTCTCCAGGGTCTCAGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR CCA 72 bp | CAAGGGGGCCTGAGACCCTGGAGACAAAAATGGCCGTaGTGGCCAAGTGAGCACTGGTTTATTGACCACACC | + |
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Preference number: 3 (lower is better) Translates to: QGGLRPWRQKWP*WPSEHWFIDHT Trigger: GGTGTGGTCAATAAACCAGTGCTCACTTGGCCACCACGGCCATTTTTGTCTCCAGGGTCTCAGGCCCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | CCCCTGTGGTCTGGATGCTTGACAGGCTTTGCTCAATaGTCAGAAGCCCACAGTTCCCAGAAACCTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: PLWSGCLTGFAQ*SEAHSSQKPDW Trigger: CCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAAGCATCCAGACCACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | TGCTTCTTGGCTGAATTCCTGCCCCTGTGGTCTGGATaGTTGACAGGCTTTGCTCAATGCTCAGAAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: CFLAEFLPLWSG*LTGFAQCSEAH Trigger: GTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAAGCATCCAGACCACAGGGGCAGGAATTCAGCCAAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | CCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTaGCCACTGGAAGCTTGCAGAGAGACATGGCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PSGLSKRNVPHM*PLEACRETWLL Trigger: TAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTGCCCAATGCAGGCTGCTCCTaGGATAACACTGGTTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: IKVGAIRSLKTKCAPHVPNAGCS*DNTGSR Trigger: TCGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATT...GGGCACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR TCA 72 bp | TGCTCAATGCTCAGAAGCCCACAGTTCCCAGAAACCTaGCTGGTTTTGCCTCACTCTTCTCCAGGCCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: CSMLRSPQFPET*LVLPHSSPGLV Trigger: CACTAGGCCTGGAGAAGAGTGAGGCAAAACCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | AAACGAAATGTGCCCCACATGTGCCCACTGGAAGCTTaGAGAGAGACATGGCTGCTATACTGGAATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KRNVPHMCPLEA*RETWLLYWNAG Trigger: GCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGGGCACATTTCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CCA 72 bp | CCACTGGAAGCTTGCAGAGAGACATGGCTGCTATACTaGAATGCAGGCTGCTCCTTGGATAACACTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: PLEACRETWLLY*NAGCSLDNTGS Trigger: GGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR GCA 72 bp | ACATGTGCCCACTGGAAGCTTGCAGAGAGACATGGCTaGTATACTGGAATGCAGGCTGCTCCTTGGATAACA | + |
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Preference number: 3 (lower is better) Translates to: TCAHWKLAERHG*YTGMQAAPWIT Trigger: TGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR CCA 72 bp | TGGGGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATaGTGGGATCCGGACATCAAAGTGGGAGCCATCCGG | + |
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Preference number: 3 (lower is better) Translates to: WGLLIFIAFQGE*WDPDIKVGAIR Trigger: CCGGATGGCTCCCACTTTGATGTCCGGATCCCACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTGCAGCAATTATGGGTaGAGAGCTGTTGTTCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: CSNYGLRAVVLRANLGLSCSNYG*RAVVLR Trigger: CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCA...GCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| 3UTR CCA 72 bp | GGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATGGTaGGATCCGGACATCAAAGTGGGAGCCATCCGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GLLIFIAFQGEW*DPDIKVGAIRS Trigger: AGACCGGATGGCTCCCACTTTGATGTCCGGATCCCACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| 3UTR TCA 72 bp | GCAAAATGCAGTCCAATTCTCTGGCTCCTGTTGGCCTaGAAGAAGCTCCAAAAGCAGCTTGACTTGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: AKCSPILWLLLA*KKLQKQLDLVT Trigger: AGTGACCAAGTCAAGCTGCTTTTGGAGCTTCTTTCAGGCCAACAGGAGCCAGAGAATTGGACTGCATTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| 3UTR GCA 72 bp | AAAAAGAATTTCACAGTAGGGAGAGGTTTAGAGTTCTaGAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: KKNFTVGRGLEF*SNYGLRAVVLR Trigger: CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGTGAAATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTGAGGAAGGCGCACCCGGGTCCCTGAGAGACTaGATATCCGCCAGTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LLTVTSAPRCPASEEGAPGSLRD*ISASAA Trigger: AGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCC...GGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CCA 90 bp | CTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTGAGGAAGGCGCACCCACCTCCTTAGAGCCATaGCCGGCAGGGTTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LLTVTSAPRCPASEEGAPTSLEP*PAGFSA Trigger: AGCAGAGAACCCTGCCGGCCATGGCTCTAAGGAGGT...GGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR GCA 90 bp | TCCGGTCTCTCAAAACGAAATGTGCCCCACATGTGCCCACTGGAAGCTTGCAGACTGAATATCCGCCAGTaGCGCTCCCGGAGCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: SGLSKRNVPHMCPLEACRLNIRQ*RSRSCT Trigger: GGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAG...TCTGCAAGCTTCCAGTGGGCACATGTGGGGCACATTTCGTTTTGAGAGACCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| CDS-3UTR GCA 90 bp | AGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTGGATAACACTGGTTCCCTaGCCACCACCCCTCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SNYGLRAVVLRANLGLSWITLVP*PPPLVL Trigger: GAGGACGAGGGGTGGTGGGCAGGGAACCAGTGTTAT...CCAGCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR GCA 90 bp | AGAATGGTGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATAGTGGCCCAAGGATaGTCACCCTGCCCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RMVGSGHQSGSHPVSQNEIVAQG*SPCPPP Trigger: GGGTGGTGGGCAGGGTGAGCATCCTTGGGCCACTAT...TTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCACCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCTGAGGGTGGGGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATGGTGGGGTCCCTGAGAGACTaGATATCCGCCAGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLRVGSSHLYCFPRRMVGSLRD*ISASAA Trigger: AGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCC...CACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACCCCACCCTCAGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTGCCCTCATACAGTCTGGCCTaGCAGGGAAACAGGACGACC | + |
|
Preference number: 4 (lower is better) Translates to: IKVGAIRSLKTKCAPHVPSYSLA*QGNRTT Trigger: GGTCGTCCTGTTTCCCTGGCAGGCCAGACTGTATGA...GGGCACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTACCTCCTTAGAGCCATaGCCGGCAGGGTTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHQSGSHPVSQNEMCPTCTSLEP*PAGFSA Trigger: AGCAGAGAACCCTGCCGGCCATGGCTCTAAGGAGGT...ACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | AATTTCACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGAGACCACCAGCGGCTaGCCACTGCTAGGGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NFTVGRGLEFCSNYGLRAETTSG*PLLGPV Trigger: GACGGGCCCTAGCAGTGGGCAGCCGCTGGTGGTCTC...AGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGTGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCCCACATGTGCCCACTGGAAGCTTGCAGAGAGACATGGCTGCTATACTGCCCGGCTGTCATCATaGTTAGCCAAGAAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MCPTCAHWKLAERHGCYTARLSS*LAKKVT Trigger: TGTGACCTTCTTGGCTAACCATGATGACAGCCGGGC...AGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCCCCACATGTGCCCACTaGAAGCTTGCAGAGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CSNYGLRAVVLRANLGLSPTCAH*KLAERH Trigger: ATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTGGG...GCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR TCA 90 bp | CTGAGACCCTGGAGACAAAAATGGCCGTGGTGGCCAAGTGAGCACTGGTTTATTTGTTTCCAGGGTCCCTaGGAGACTGAATATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPWRQKWPWWPSEHWFICFQGP*ETEYPP Trigger: TGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACA...AATAAACCAGTGCTCACTTGGCCACCACGGCCATTTTTGTCTCCAGGGTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR GCA 90 bp | CATGGCTGCTATACTGGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCGAAGCCGGCAGGGTTCTCTaGTTTTTCTGGAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGCYTGMQAAPWITLVPEAGRVL*FFWSCR Trigger: TCTGCAACTCCAGAAAAAGCAGAGAACCCTGCCGGC...TTCGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGCTGAATATCCGCCAGTaGCGCTCCCGGAGCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GRGLEFCSNYGLRAVVLRLNIRQ*RSRSCT Trigger: GGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAG...CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | AGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTGGGCAGAGAGACATGGCTaGTATACTGGAATGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNYGLRAVVLRANLGLSWAERHG*YTGMQA Trigger: AGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGC...CCAGCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR GCA 90 bp | TTGACAGGCTTTGCTCAATGCTCAGAAGCCCACAGTTCCCAGAAACCTGACTGGTGCCCACTGGAAGCTTaGAGAGAGACATGGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTGFAQCSEAHSSQKPDWCPLEA*RETWLL Trigger: TAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCA...CCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCTGAGGGTGGGGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATGGTGTGTTTCCAGGGTCCCTaGGAGACTGAATATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLRVGSSHLYCFPRRMVCFQGP*ETEYPP Trigger: TGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACA...CACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACCCCACCCTCAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTTGCTCAATGCTCAGAAGCCCACAGTTCCCAGAAACCTGACTGGTTTTAATGTGCCCCACATGTaGCCACTGGAAGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALLNAQKPTVPRNLTGFNVPHM*PLEACR Trigger: TCTGCAAGCTTCCAGTGGGCACATGTGGGGCACATT...AAAACCAGTCAGGTTTCTGGGAACTGTGGGCTTCTGAGCATTGAGCAAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGAGACCCGGAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAAGTTCTCTGCTTTTTCTaGAGTTGCAGAAGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GRETRNLVQCCSLLPVPQVLCFF*SCRSHI Trigger: GATGTGGCTTCTGCAACTCCAGAAAAAGCAGAGAAC...TTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTCCGGGTCTCTCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | CGGAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTTCTCTGAGATATATGTaGGCAGTCACGGGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLVQCCSLLPVPQDVQPSLRYM*AVTGIN Trigger: ATTGATGCCCGTGACTGCCCACATATATCTCAGAGA...AGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | GAACTTAGTCCAGTGCTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTTTCCAAGGAGAATGGTaGGATCCGGACATCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSPVLLTVTSAPRCPASFQGEW*DPDIKV Trigger: CACTTTGATGTCCGGATCCCACCATTCTCCTTGGAA...AGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAGCACTGGACTAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| 3UTR CAA 72 bp | GTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTaGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGLEFCSNYG*RAVVLRANLGL Trigger: GAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTACCAGTGAAGGCCTaGGGGTGGGGTCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TVGRGLEFCSNYGLRAVVLPVKA*GWGLLI Trigger: GATGAGAAGACCCCACCCTCAGGCCTTCACTGGTAG...AACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCCCGGTCATACAGTCTaGCCTGCCAGGGAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVGRGLEFCSNYGLRAVVPGHTV*PARETG Trigger: TCCTGTTTCCCTGGCAGGCCAGACTGTATGACCGGG...AACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGGTGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAGTTCTCTGCTTTTTCTaGAGTTGCAGAAGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RMVGSGHQSGSHPVSQNEVLCFF*SCRSHI Trigger: GATGTGGCTTCTGCAACTCCAGAAAAAGCAGAGAAC...TTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCACCATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCTGCTATACTGGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCGAATCTCTGAGATATATGTaGGCAGTCACGGGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGCYTGMQAAPWITLVPESLRYM*AVTGIN Trigger: ATTGATGCCCGTGACTGCCCACATATATCTCAGAGA...TTCGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGATGCAGGCTGCTCCTTaGATAACACTGGTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGLEFCSNYGLRAVVLRMQAAP*ITLVPC Trigger: GCAGGGAACCAGTGTTATCCAAGGAGCAGCCTGCAT...CCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCCCTAGAAGAAACTTTGCATGAAAAGCAACTAAGAGTTCCTAAAGGGTCATACAGTCTGGCCTaGCAGGGAAACAGGACGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLEETLHEKQLRVPKGSYSLA*QGNRTT Trigger: GGTCGTCCTGTTTCCCTGGCAGGCCAGACTGTATGA...CCCTTTAGGAACTCTTAGTTGCTTTTCATGCAAAGTTTCTTCTAGGGAGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTGCCGGCAGGGTTCTCTaGTTTTTCTGGAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVGRGLEFCSNYGLRAVVAGRVL*FFWSCR Trigger: TCTGCAACTCCAGAAAAAGCAGAGAACCCTGCCGGC...AACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGTCTCAAAACGAAATGTaGCCCACATGTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEFCSNYGLRAVVLRANLSQNEM*PTCAHW Trigger: CCAGTGGGCACATGTGGGGCACATTTCGTTTTGAGA...CAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTCCCTAGAAGAAACTTTGCATGAAAAGCAACTAAGAGTTCCTAAAGGGGCCCGGCTGTCATCATaGTTAGCCAAGAAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLEETLHEKQLRVPKGARLSS*LAKKVT Trigger: TGTGACCTTCTTGGCTAACCATGATGACAGCCGGGC...CCCTTTAGGAACTCTTAGTTGCTTTTCATGCAAAGTTTCTTCTAGGGAGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR GCA 90 bp | AATTTCACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTTACTGGAATGCAGGCTaGTCCTTGGATAACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFTVGRGLEFCSNYGLRAYWNAG*SLDNTG Trigger: ACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTA...AGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGTGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGAGTCTTATGTGGGTCTTCCAAGAAAAGTTACAATCTCCCTCCAAAAAACATGGCTGCTATACTaGAATGCAGGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEESYVGLPRKVTISLQKTWLLY*NAGCSL Trigger: CAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGT...TTTTTGGAGGGAGATTGTAACTTTTCTTGGAAGACCCACATAAGACTCCTCCAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTTTATTGCTTTCCAAGGAGAATGGTGGGATCCGGACATCAAAGTGGGGGAGGTGCTTTTGTCTaGTCATACAGAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHLYCFPRRMVGSGHQSGGGAFV*SYRRNL Trigger: AAGATTTCTTCTGTATGACCAGACAAAAGCACCTCC...CCCACTTTGATGTCCGGATCCCACCATTCTCCTTGGAAAGCAATAAAGATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGAGTCTTATGTGGGTCTTCCAAGAAAAGTTACAATCTCCCTCCAAAAAGGAGGTGCTTTTGTCTaGTCATACAGAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEESYVGLPRKVTISLQKGGAFV*SYRRNL Trigger: AAGATTTCTTCTGTATGACCAGACAAAAGCACCTCC...TTTTTGGAGGGAGATTGTAACTTTTCTTGGAAGACCCACATAAGACTCCTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS CCA 90 bp | CCCCTGCTCCACCGACCGCACACAGTGGCCTCGACCCTCGGGTCGTaGCCAGCGACCGAGACCACCAGCGGCTGCCCACTGCTAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLHRPHTVASTLGS*PATETTSGCPLLGP Trigger: GGGCCCTAGCAGTGGGCAGCCGCTGGTGGTCTCGGTCGCTGGCCACGACCCGAGGGTCGAGGCCACTGTGTGCGGTCGGTGGAGCAGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS CCA 90 bp | TGTGGCCACCGGCGGAAGGCCCCCTGCTCCACCGACCGCACACAGTaGCCTCGACCCTCGGGTCGTGGCCAGCGACCGAGACCACCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CGHRRKAPCSTDRTQ*PRPSGRGQRPRPPA Trigger: CGCTGGTGGTCTCGGTCGCTGGCCACGACCCGAGGGTCGAGGCCACTGTGTGCGGTCGGTGGAGCAGGGGGCCTTCCGCCGGTGGCCACA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS TCA 90 bp | CACCCTGCCCACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTaGGAGACTGAATATCCGCCAGTGCCGCTCCCGGAGCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPAHHPSSSNCFQGP*ETEYPPVPLPELYH Trigger: GTGGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTGGGCAGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS TCA 90 bp | TTCCCTGCCCACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTaGGAGACTGAATATCCGCCAGTGCCGCTCCCGGAGCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPAHHPSSSNCFQGP*ETEYPPVPLPELYH Trigger: GTGGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTGGGCAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS GCA 90 bp | AACAGGACCAGCAACGAGGCCATAGTGGCCCAAGGATGCTCACCCTaGCCACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRTSNEAIVAQGCSP*PPPLVLELFPGSLR Trigger: TCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTGGGCAGGGTGAGCATCCTTGGGCCACTATGGCCTCGTTGCTGGTCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS TCA 90 bp | CCACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTGAGAGACTaGATATCCGCCAGTGCCGCTCCCGGAGCTGTACCACATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPPLVLELFPGSLRD*ISASAAPGAVPHHC Trigger: ACAGTGATGTGGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS GCA 90 bp | TTTTGGCACCTCAAACACACCAACTGTCTCCAGCACTTTGCCCTCTaGACGGTTCCGGGACGACAGATGCCTTCGGGTCGTCGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FWHLKHTNCLQHFAL*TVPGRQMPSGRRCG Trigger: GCCACAGCGACGACCCGAAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAGGTGCCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS TCA 90 bp | TTCTCGGTGGTCTCCCTGTGCACGTCAGAGAGCTCTAGCCACGGGTaGTTCTTCTCTTGCCAGGCCCGCAGCGTTTCTCGAGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVVSLCTSESSSHG*FFSCQARSVSRATK Trigger: TTTTGTGGCTCGAGAAACGCTGCGGGCCTGGCAAGAGAAGAATCACCCGTGGCTAGAGCTCTCTGACGTGCACAGGGAGACCACCGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCCCACATGTGCCCACTGGAAACTGTCTCCAGCACTTaGCCCTCTGCACGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WEPSGLSKRNVPHMCPLETVSST*PSARFR Trigger: CCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGT...TTCCAGTGGGCACATGTGGGGCACATTTCGTTTTGAGAGACCGGATGGCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
||
| CDS GCA 90 bp | TGCTATACTGGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCTaGCCACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CYTGMQAAPWITLVP*PPPLVLELFPGSLR Trigger: TCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTGGGCAGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS GCA 90 bp | CATTTTGTTTTGGCACCTCAAACACACCAACTGTCTCCAGCACTTTaGCCTCTGCACGGTTCCGGGACGACAGATGCCTTCGGGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HFVLAPQTHQLSPAL*PLHGSGTTDAFGSS Trigger: CGACGACCCGAAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAGGTGCCAAAACAAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS GCA 90 bp | CCTCGAACTGTTTCCAGGGTCCCTGAGAGACTGAATATCCGCCAGTaGCGCTCCCGGAGCTGTACCACATCACTGTCCAAGTTTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRTVSRVPERLNIRQ*RSRSCTTSLSKFSK Trigger: CTTGGAAAACTTGGACAGTGATGTGGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS CCA 90 bp | CACATGTGCCCACTGGAAGCTTGCAGAGAGACATGGCTGCTATACTaGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HMCPLEACRETWLLY*NAGCSLDNTGSLPT Trigger: GGTGGGCAGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCCAGTATAGCAGCCATGTCTCTCTGCAAGCTTCCAGTGGGCACATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
||
| CDS CCA 90 bp | GGAGGTGTAGGGGAGGATGTCTTCATGGCTGACATAGTCCAACCCTaGGATAGCATAGAGCGCCCGGCTGTCATCATGGTTAGCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGVGEDVFMADIVQP*DSIERPAVIMVSQE Trigger: TTCTTGGCTAACCATGATGACAGCCGGGCGCTCTATGCTATCCCAGGGTTGGACTATGTCAGCCATGAAGACATCCTCCCCTACACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTGAGGAAGGCGCACCCGGCATCAATCAGCACTaGGTAGTAAGTGTGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVTSAPRCPASEEGAPGINQH*VVSVSF Trigger: AAAACTCACACTTACTACCAAGTGCTGATTGATGCC...GGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CAA 90 bp | CTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTGAGGAAGGCGCACCCCAAAAGGAGGTGCTTTaGTCTGGTCATACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLTVTSAPRCPASEEGAPQKEVL*SGHTEE Trigger: TTCTTCTGTATGACCAGACAAAAGCACCTCCTTTTG...GGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CAA 90 bp | TGGTGGCCAAGTGAGCACTGGTTTATTGACCACACCTCACATTCCAGAAAACATACTGTCTCCAGCACTTaGCCCTCTGCACGGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: WWPSEHWFIDHTSHSRKHTVSST*PSARFR Trigger: CCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGT...ATGTTTTCTGGAATGTGAGGTGTGGTCAATAAACCAGTGCTCACTTGGCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CAA 90 bp | CTGCTCACTGTTACCAGTGCCCCAAGATGTCCAGCCTCTGAGGAAGGCGCACCCGTCTTCTCATCTTTATaGCTTTCCAAGGAGAATGGT | + |
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Preference number: 5 (lower is better) Translates to: LLTVTSAPRCPASEEGAPVFSSL*LSKENG Trigger: ACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGAC...GGGTGCGCCTTCCTCAGAGGCTGGACATCTTGGGGCACTGGTAACAGTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CAA 90 bp | TTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGAATGCAGGCTGCTCCTaGGATAACACTGGTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LEFCSNYGLRAVVLRANLNAGCS*DNTGSL Trigger: CAGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATT...CAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCTGCAGAACTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS-3UTR CAA 90 bp | AGCAATTATGGGTTGAGAGCTGTTGTTCTTAGGGCCAACCTGGGCCTCAGCTGGATTTTCCATTTTGTTTaGGCACCTCAAACACACCAA | + |
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Preference number: 5 (lower is better) Translates to: SNYGLRAVVLRANLGLSWIFHFV*APQTHQ Trigger: TTGGTGTGTTTGAGGTGCCAAAACAAAATGGAAAAT...CCAGCTGAGGCCCAGGTTGGCCCTAAGAACAACAGCTCTCAACCCATAATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS-3UTR CAA 90 bp | TGGGATCCGGACATCAAAGTGGGAGCCATCCGGTCTCTCAAAACGAAATGTGCCATTTTCCATTTTGTTTaGGCACCTCAAACACACCAA | + |
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Preference number: 5 (lower is better) Translates to: WDPDIKVGAIRSLKTKCAIFHFV*APQTHQ Trigger: TTGGTGTGTTTGAGGTGCCAAAACAAAATGGAAAAT...GGCACATTTCGTTTTGAGAGACCGGATGGCTCCCACTTTGATGTCCGGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCCTGAGGGTGGGGTCTTCTCATCTTTATTGCTTTCCAAGGAGAATGGTGGGCATCAATCAGCACTaGGTAGTAAGTGTGAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: EGLRVGSSHLYCFPRRMVGINQH*VVSVSF Trigger: AAAACTCACACTTACTACCAAGTGCTGATTGATGCC...CACCATTCTCCTTGGAAAGCAATAAAGATGAGAAGACCCCACCCTCAGGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| CDS-3UTR CAA 90 bp | AATTTCACAGTAGGGAGAGGTTTAGAGTTCTGCAGCAATTATGGGTTGAGAGCTCAAAAGGAGGTGCTTTaGTCTGGTCATACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: NFTVGRGLEFCSNYGLRAQKEVL*SGHTEE Trigger: TTCTTCTGTATGACCAGACAAAAGCACCTCCTTTTG...AGCTCTCAACCCATAATTGCTGCAGAACTCTAAACCTCTCCCTACTGTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGGAGTCTTATGTGGGTCTTCCAAGAAAAGTTACAATCTCCCTCCAAAAACTCATATTTTCCATTTaGTTTTGGCACCTCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: LEESYVGLPRKVTISLQKLIFSI*FWHLKH Trigger: GTGTTTGAGGTGCCAAAACAAAATGGAAAATATGAG...TTTTTGGAGGGAGATTGTAACTTTTCTTGGAAGACCCACATAAGACTCCTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS GCA 72 bp | CTCGGGTCGTGGCCAGCGACCGAGACCACCAGCGGCTaGCCACTGCTAGGGCCCGTCGGGCCACACAACCAG | + |
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Preference number: 6 (lower is better) Translates to: LGSWPATETTSG*PLLGPVGPHNQ Trigger: CTGGTTGTGTGGCCCGACGGGCCCTAGCAGTGGGCAGCCGCTGGTGGTCTCGGTCGCTGGCCACGACCCGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS CCA 72 bp | CACCGACCGCACACAGTGGCCTCGACCCTCGGGTCGTaGCCAGCGACCGAGACCACCAGCGGCTGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: HRPHTVASTLGS*PATETTSGCPL Trigger: CAGTGGGCAGCCGCTGGTGGTCTCGGTCGCTGGCCACGACCCGAGGGTCGAGGCCACTGTGTGCGGTCGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS TCA 72 bp | CACCACCCCTCGTCCTCGAACTGTTTCCAGGGTCCCTaGGAGACTGAATATCCGCCAGTGCCGCTCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: HHPSSSNCFQGP*ETEYPPVPLPE Trigger: CTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGGACGAGGGGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS GCA 72 bp | AACAGGACCAGCAACGAGGCCATAGTGGCCCAAGGATaGTCACCCTGCCCACCACCCCTCGTCCTCGAACTG | + |
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Preference number: 6 (lower is better) Translates to: NRTSNEAIVAQG*SPCPPPLVLEL Trigger: CAGTTCGAGGACGAGGGGTGGTGGGCAGGGTGAGCATCCTTGGGCCACTATGGCCTCGTTGCTGGTCCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133601.2 |
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| CDS TCA 72 bp | GTCTCCCTGTGCACGTCAGAGAGCTCTAGCCACGGGTaGTTCTTCTCTTGCCAGGCCCGCAGCGTTTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: VSLCTSESSSHG*FFSCQARSVSR Trigger: TCGAGAAACGCTGCGGGCCTGGCAAGAGAAGAATCACCCGTGGCTAGAGCTCTCTGACGTGCACAGGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS TCA 72 bp | CTCGTCCTCGAACTGTTTCCAGGGTCCCTGAGAGACTaGATATCCGCCAGTGCCGCTCCCGGAGCTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: LVLELFPGSLRD*ISASAAPGAVP Trigger: TGGTACAGCTCCGGGAGCGGCACTGGCGGATATTCAGTCTCTCAGGGACCCTGGAAACAGTTCGAGGACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS GCA 72 bp | GGAATGCAGGCTGCTCCTTGGATAACACTGGTTCCCTaGCCACCACCCCTCGTCCTCGAACTGTTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GMQAAPWITLVP*PPPLVLELFPG Trigger: CCCTGGAAACAGTTCGAGGACGAGGGGTGGTGGGCAGGGAACCAGTGTTATCCAAGGAGCAGCCTGCATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001127.11 |
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| CDS GCA 72 bp | CTCAAACACACCAACTGTCTCCAGCACTTTGCCCTCTaGACGGTTCCGGGACGACAGATGCCTTCGGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: LKHTNCLQHFAL*TVPGRQMPSGR Trigger: ACGACCCGAAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS GCA 72 bp | TTGGCACCTCAAACACACCAACTGTCTCCAGCACTTTaGCCTCTGCACGGTTCCGGGACGACAGATGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LAPQTHQLSPAL*PLHGSGTTDAF Trigger: GAAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAGGTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 90 bp | CCATTTTGTTTTGGCACCTCAAACACACCAACTGTCTCCAGCACTTaGCCCTCTGCACGGTTCCGGGACGACAGATGCCTTCGGGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: PFCFGTSNTPTVSST*PSARFRDDRCLRVV Trigger: GACGACCCGAAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAGGTGCCAAAACAAAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CCA 72 bp | GGGGAGGATGTCTTCATGGCTGACATAGTCCAACCCTaGGATAGCATAGAGCGCCCGGCTGTCATCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: GEDVFMADIVQP*DSIERPAVIMV Trigger: AACCATGATGACAGCCGGGCGCTCTATGCTATCCCAGGGTTGGACTATGTCAGCCATGAAGACATCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 72 bp | TTTGGCACCTCAAACACACCAACTGTCTCCAGCACTTaGCCCTCTGCACGGTTCCGGGACGACAGATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FGTSNTPTVSST*PSARFRDDRCL Trigger: AAGGCATCTGTCGTCCCGGAACCGTGCAGAGGGCAAAGTGCTGGAGACAGTTGGTGTGTTTGAGGTGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 72 bp | CTGGTCATACAGAAGAAATCTTTCAAAGAGCTCGTGTaGAATGGGAACCTGATCCGTGGAGGTGTAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LVIQKKSFKELV*NGNLIRGGVGE Trigger: CTCCCCTACACCTCCACGGATCAGGTTCCCATTCAACACGAGCTCTTTGAAAGATTTCTTCTGTATGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 90 bp | AGATCTCTGAGATATATGTGGGCAGTCACGGGCATCAATCAGCACTaGGTAGTAAGTGTGAGTTTTGCCTTTCACCTCCTTAGAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RSLRYMWAVTGINQH*VVSVSFAFHLLRAM Trigger: CATGGCTCTAAGGAGGTGAAAGGCAAAACTCACACTTACTACCAAGTGCTGATTGATGCCCGTGACTGCCCACATATATCTCAGAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 90 bp | TGCTTTTGTCTGGTCATACAGAAGAAATCTTTCAAAGAGCTCGTGTaGAATGGGAACCTGATCCGTGGAGGTGTAGGGGAGGATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CFCLVIQKKSFKELV*NGNLIRGGVGEDVF Trigger: GAAGACATCCTCCCCTACACCTCCACGGATCAGGTTCCCATTCAACACGAGCTCTTTGAAAGATTTCTTCTGTATGACCAGACAAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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| CDS CAA 72 bp | AGATATATGTGGGCAGTCACGGGCATCAATCAGCACTaGGTAGTAAGTGTGAGTTTTGCCTTTCACCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RYMWAVTGINQH*VVSVSFAFHLL Trigger: AAGGAGGTGAAAGGCAAAACTCACACTTACTACCAAGTGCTGATTGATGCCCGTGACTGCCCACATATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001127.11 ENSMUST00000133601.2 |
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