Pregenerated sensors for POLD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020471Ensembl transcript IDs: ENSMUST00000102922.10, ENSMUST00000153995.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCCCCTCCAGGTCCTCTTaGTCTGCCCCGAAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLPSRSS*SAPKPA Trigger: TGCGGGCTTCGGGGCAGAGCAAGAGGACCTGGAGGG...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTGGGCAAAGGTGGCATTaGTGGCAGAGGGCGGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPGQRWH*WQRAGR Trigger: TCGCCCCGCCCTCTGCCAGCAATGCCACCTTTGCCC...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTTGGGGGACCAGGTTGTaGTCCTCGCTGATCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPWGTRL*SSLISR Trigger: GCGGGAGATCAGCGAGGAGCACAACCTGGTCCCCCA...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTGTACCCGGGCAAAGGTaGCATTGCTGGCAGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPVPGQR*HCWQRA Trigger: CGCCCTCTGCCAGCAATGCCACCTTTGCCCGGGTAC...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCCCGGGTGGATATATTTaGTCCGTGGAGGCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLPGGYI*SVEAGG Trigger: TCCCCCAGCCTCCACGGAGCAAATATATCCACCCGG...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCGGGTACCGGCTTCTGTaGAGCCAGGTCAGCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLGYRLL*SQVSKA Trigger: TGCTTTGCTGACCTGGCTCCACAGAAGCCGGTACCC...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTAGTGTGGGCCCTCTGTaGTGCCTGCTCGGAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPSVGPL*CLLGEH Trigger: ATGTTCTCCGAGCAGGCAGCACAGAGGGCCCACACT...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTAGACGTGGGCAGCACTaGACTGTTCTCCTTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPRRGQH*TVLLRP Trigger: GGGACGAAGGAGAACAGTGCAGTGCTGCCCACGTCT...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCGGTATTTGGCCTTGTTaGTGGAGTCTCTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLGIWPC*WSLCSG Trigger: CCCAGAGCAGAGACTCCATCAACAAGGCCAAATACC...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCCAGTGGTCTTCAACCTaGAACCTCCCGTCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLQWSST*NLPSSF Trigger: GAAAGATGACGGGAGGTTTCAGGTTGAAGACCACTG...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | TTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGTCTCGTCCAGCATTTTaGCTGCCTCCACACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FMFYLQGLHCKGDVLSPLSRPAF*LPPHWL Trigger: CAGCCAGTGTGGAGGCAGTCAAAATGCTGGACGAGA...CAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | TTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCTTGGTATGGGTTGGTaGCCAGCTGGAGTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FMFYLQGLHCKGDVLSPLLGMGW*PAGVWS Trigger: ACTCCACACTCCAGCTGGTCACCAACCCATACCAAG...CAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | TGTGAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGGCCGTGGGGCTGATGTaGCGAACCCGCAGGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CEKFMFYLQGLHCKGDVLAVGLM*RTRRVH Trigger: GTGGACCCTGCGGGTTCGTCACATCAGCCCCACGGC...CAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCCGTCTGTGTGGAACTaGAGTCAGGAACAGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPPSVWN*SQEQPL Trigger: TAGTGGCTGTTCCTGACTTCAGTTCCACACAGACGG...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTGGAGTTGGTGTAAGTTaGCACAGGTACCCGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPGVGVS*HRYPGK Trigger: TTTGCCCGGGTACCTGTGGCAACTTACACCAACTCC...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCTGGCCAGCGGGAACATaGAGGGGTGCAGGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSWPAGT*RGAGAA Trigger: AGCAGCCCCTGCACCCCTGCATGTTCCCGCTGGCCA...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCGGTTGCCTGCGAGGATaGCTCGAGAGACGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSGCLRG*LERRGQ Trigger: CTGCCCACGTCTCTCGAGTCATCCTCGCAGGCAACC...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | TGTGAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGCTGCCCCAGTGTTGCTaGGCCCGGCTCACCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CEKFMFYLQGLHCKGDVLLPQCC*ARLTRN Trigger: GTTCCTGGTGAGCCGGGCGCAGCAACACTGGGGCAG...CAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | AAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCAGTCGGAAGGGCTGTaGGGAGTTGGTGTAAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KFMFYLQGLHCKGDVLSPQSEGL*GVGVSC Trigger: GCAACTTACACCAACTCCTCACAGCCCTTCCGACTG...CGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | TTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGAGGGCTGTGAGGAGTTaGTGTAAGTTGCCACAGGTA | + |
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Preference number: 4 (lower is better) Translates to: FMFYLQGLHCKGDVLSPLRAVRS*CKLPQV Trigger: TACCTGTGGCAACTTACACCAACTCCTCACAGCCCT...CAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTTTTTGGAACCAAAGCTaGGGGTGTTGCCACAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPFWNQS*GCCHRS Trigger: ACTTCTGTGGCAACACCCCCAGCTTTGGTTCCAAAA...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR TCA 90 bp | AAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCCTCAGGACCTCGGATaGTTTTGGAACCAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KFMFYLQGLHCKGDVLSPPQDLG*FWNQSW Trigger: CCAGCTTTGGTTCCAAAATCATCCGAGGTCCTGAGG...CGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCGCTGAGCAGGTTGCCTaGGAGGATGACTCGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSAEQVA*EDDSRD Trigger: GTCTCTCGAGTCATCCTCGCAGGCAACCTGCTCAGC...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTTTCAGTTTGATACGCTaGAGCTCATCTTCTAAGACC | + |
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Preference number: 4 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPFSLIR*SSSSKT Trigger: GGTCTTAGAAGATGAGCTGCAGCGTATCAAACTGAA...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCAATGGTGGCTTGGTATaGGTTGGTGACCAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSNGGLV*VGDQLE Trigger: CTCCAGCTGGTCACCAACCCATACCAAGCCACCATT...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CCA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCACTAACAGCACTACCTaGTCCTCAGGACCTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSTNSTT*SSGPRM Trigger: CATCCGAGGTCCTGAGGACCAGGTAGTGCTGTTAGT...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS CCA 90 bp | AGTTGGTGTAAGTTGCCACAGGTACCCGGGCAAAGGTGGCATTGCTaGCAGAGGGCGGGGCGAGCAGAGTGTGGGCCCTCTGTGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SWCKLPQVPGQRWHC*QRAGRAECGPSVLP Trigger: AGGCAGCACAGAGGGCCCACACTCTGCTCGCCCCGCCCTCTGCCAGCAATGCCACCTTTGCCCGGGTACCTGTGGCAACTTACACCAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS CCA 90 bp | GCTGTGAGGAGTTGGTGTAAGTTGCCACAGGTACCCGGGCAAAGGTaGCATTGCTGGCAGAGGGCGGGGCGAGCAGAGTGTGGGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AVRSWCKLPQVPGQR*HCWQRAGRAECGPS Trigger: AGAGGGCCCACACTCTGCTCGCCCCGCCCTCTGCCAGCAATGCCACCTTTGCCCGGGTACCTGTGGCAACTTACACCAACTCCTCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS TCA 90 bp | GGCGTACTGCCGGTTAAAGCTGCGCTCTCCCAGTCGGAAGGGCTGTaGGGAGTTGGTGTAAGTTGCCACAGGTACCCGGGCAAAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GVLPVKAALSQSEGL*GVGVSCHRYPGKGG Trigger: GCCACCTTTGCCCGGGTACCTGTGGCAACTTACACCAACTCCTCACAGCCCTTCCGACTGGGAGAGCGCAGCTTTAACCGGCAGTACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS CCA 90 bp | GTGTTATGGCTGAGCAGGTTGCCTGCGAGGATGACTCGAGAGACGTaGGCAGCACTGCACTGTTCTCCTTCGTCCCCAAGCTGTCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: VLWLSRLPARMTRET*AALHCSPSSPSCPV Trigger: GACGGGACAGCTTGGGGACGAAGGAGAACAGTGCAGTGCTGCCCACGTCTCTCGAGTCATCCTCGCAGGCAACCTGCTCAGCCATAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCGGCTGGGGGACCAGGTaGTGCTCCTCGCTGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLGWGTR*CSSLIS Trigger: GGAGATCAGCGAGGAGCACAACCTGGTCCCCCAGCC...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTTCCGGGTGGATATATTaGCTCCGTGGAGGCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: MFYLQGLHCKGDVLSPLPSGWIY*LRGGWG Trigger: CCCCCAGCCTCCACGGAGCAAATATATCCACCCGGA...AGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCGCCCTCCAGGTCCTCTaGCTCTGCCCCGAAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSALQVL*LCPEAR Trigger: GCGGGCTTCGGGGCAGAGCAAGAGGACCTGGAGGGC...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS GCA 90 bp | GAACCCGCAGGGTCCACTCTAGGATCTCTAAGTGGTCTTCCATGCTaGTATACCGGAAGATATCACTCACGTTCTGTCCAGATGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: EPAGSTLGSLSGLPC*YTGRYHSRSVQMSP Trigger: TGGGGACATCTGGACAGAACGTGAGTGATATCTTCCGGTATAGCAGCATGGAAGACCACTTAGAGATCCTAGAGTGGACCCTGCGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS GCA 90 bp | GACGAACCCGCAGGGTCCACTCTAGGATCTCTAAGTGGTCTTCCATaGTGCTATACCGGAAGATATCACTCACGTTCTGTCCAGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: DEPAGSTLGSLSGLP*CYTGRYHSRSVQMS Trigger: GGACATCTGGACAGAACGTGAGTGATATCTTCCGGTATAGCAGCATGGAAGACCACTTAGAGATCCTAGAGTGGACCCTGCGGGTTCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TGTGAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGTCGGCTGCCCCAGTGTaGCTGCGCCCGGCTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: CEKFMFYLQGLHCKGDVLSAAPV*LRPAHQ Trigger: CTGGTGAGCCGGGCGCAGCAACACTGGGGCAGCCGA...CAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGTGGAGGGACATGGCTTaGAACAGCGTGCCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: FMFYLQGLHCKGDVLSPLWRDMA*NSVPTT Trigger: TGTGGTGGGCACGCTGTTCAAAGCCATGTCCCTCCA...CAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS CCA 90 bp | GTTTTCTTGGTAAGGTATTTGGCCTTGTTGATGGAGTCTCTGCTCTaGGTGTTATGGCTGAGCAGGTTGCCTGCGAGGATGACTCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: VFLVRYLALLMESLL*VLWLSRLPARMTRE Trigger: CTCTCGAGTCATCCTCGCAGGCAACCTGCTCAGCCATAACACCCAGAGCAGAGACTCCATCAACAAGGCCAAATACCTTACCAAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGAGGAGTTGGTGTAAGTaGCCACAGGTACCCGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FMFYLQGLHCKGDVLSPLRSWCK*PQVPGQ Trigger: TTGCCCGGGTACCTGTGGCAACTTACACCAACTCCT...CAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGCTGCCTCTCTTCTTGGTAAGGTATTaGGCCTTGTTGATGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: FYLQGLHCKGDVLSPLPLFLVRY*ALLMES Trigger: AGACTCCATCAACAAGGCCAAATACCTTACCAAGAA...GAGAGGCAGCGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCTTATGGCTGAGCAGGTaGCCTGCGAGGATGACTCGA | + |
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Preference number: 5 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSLWLSR*PARMTR Trigger: TCGAGTCATCCTCGCAGGCAACCTGCTCAGCCATAA...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCGGACCTCGGATGATTTaGGAACCAAAGCTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSGPRMI*EPKLGV Trigger: CACCCCCAGCTTTGGTTCCAAAATCATCCGAGGTCC...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | AAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCCCGGTAAGGTATTTGGCCTaGTTGATGGAGTCTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: KFMFYLQGLHCKGDVLSPVRYLA*LMESLL Trigger: GAGCAGAGACTCCATCAACAAGGCCAAATACCTTAC...CGGGCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | TGTGAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGTACCGAGGCACTCAGTaGCAGAAGGATCTCGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CEKFMFYLQGLHCKGDVLYRGTQ*QKDLVQ Trigger: CTGGACGAGATCCTTCTGCAACTGAGTGCCTCGGTA...CAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS-3UTR CAA 90 bp | GAAAAATTCATGTTTTATTTACAGGGCTTGCATTGCAAGGGTGATGTCCTGAGCAGGTATTTGGCCTTGTaGATGGAGTCTCTGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: EKFMFYLQGLHCKGDVLSRYLAL*MESLLW Trigger: CCAGAGCAGAGACTCCATCAACAAGGCCAAATACCT...GCTCAGGACATCACCCTTGCAATGCAAGCCCTGTAAATAAAACATGAATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS CCA 72 bp | AAGTTGCCACAGGTACCCGGGCAAAGGTGGCATTGCTaGCAGAGGGCGGGGCGAGCAGAGTGTGGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KLPQVPGQRWHC*QRAGRAECGPS Trigger: AGAGGGCCCACACTCTGCTCGCCCCGCCCTCTGCCAGCAATGCCACCTTTGCCCGGGTACCTGTGGCAACTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS TCA 72 bp | CCGGTTAAAGCTGCGCTCTCCCAGTCGGAAGGGCTGTaGGGAGTTGGTGTAAGTTGCCACAGGTACCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PVKAALSQSEGL*GVGVSCHRYPG Trigger: GCCCGGGTACCTGTGGCAACTTACACCAACTCCTCACAGCCCTTCCGACTGGGAGAGCGCAGCTTTAACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS GCA 72 bp | GCTGCAGCTCACACAACTTCTTCACTTCAACTCGGCTaGCCCAGTGTTGCTGCGCCCGGCTCACCAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: AAAHTTSSLQLG*PSVAAPGSPGT Trigger: CGTTCCTGGTGAGCCGGGCGCAGCAACACTGGGGCAGCCGAGTTGAAGTGAAGAAGTTGTGTGAGCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS CCA 72 bp | AGCTGCGCTCTCCCAGTCGGAAGGGCTGTGAGGAGTTaGTGTAAGTTGCCACAGGTACCCGGGCAAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SCALPVGRAVRS*CKLPQVPGQRW Trigger: CCACCTTTGCCCGGGTACCTGTGGCAACTTACACCAACTCCTCACAGCCCTTCCGACTGGGAGAGCGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS GCA 72 bp | CACAACTTCTTCACTTCAACTCGGCTGCCCCAGTGTTaGTGCGCCCGGCTCACCAGGAACGGTCTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: HNFFTSTRLPQC*CARLTRNGLIW Trigger: CCAGATGAGACCGTTCCTGGTGAGCCGGGCGCAGCAACACTGGGGCAGCCGAGTTGAAGTGAAGAAGTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS GCA 72 bp | AACTTCTTCACTTCAACTCGGCTGCCCCAGTGTTGCTaGGCCCGGCTCACCAGGAACGGTCTCATCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: NFFTSTRLPQCC*ARLTRNGLIWM Trigger: CATCCAGATGAGACCGTTCCTGGTGAGCCGGGCGCAGCAACACTGGGGCAGCCGAGTTGAAGTGAAGAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS CAA 72 bp | ACACAACTTCTTCACTTCAACTCGGCTGCCCCAGTGTaGCTGCGCCCGGCTCACCAGGAACGGTCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TQLLHFNSAAPV*LRPAHQERSHL Trigger: CAGATGAGACCGTTCCTGGTGAGCCGGGCGCAGCAACACTGGGGCAGCCGAGTTGAAGTGAAGAAGTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102922.10 ENSMUST00000153995.2 |
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| CDS GCA 72 bp | CCTGGCATCACATCCACCGGTACCGAGGCACTCAGTTaGAGAAGGATCTCGTCCAGCATTTTGACTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGITSTGTEALS*RRISSSILTAS Trigger: GGAGGCAGTCAAAATGCTGGACGAGATCCTTCTGCAACTGAGTGCCTCGGTACCGGTGGATGTGATGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS TCA 72 bp | TGCGTAAGTTCACTAGGCAGGCCGTCTGTGTGGAACTaGAGTCAGGAACAGCCACTAACAGCACTACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CVSSLGRPSVWN*SQEQPLTALPG Trigger: ACCAGGTAGTGCTGTTAGTGGCTGTTCCTGACTTCAGTTCCACACAGACGGCCTGCCTAGTGAACTTACGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS GCA 72 bp | GGGTCCACTCTAGGATCTCTAAGTGGTCTTCCATGCTaGTATACCGGAAGATATCACTCACGTTCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSTLGSLSGLPC*YTGRYHSRSVQ Trigger: CTGGACAGAACGTGAGTGATATCTTCCGGTATAGCAGCATGGAAGACCACTTAGAGATCCTAGAGTGGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS GCA 72 bp | GCAGGGTCCACTCTAGGATCTCTAAGTGGTCTTCCATaGTGCTATACCGGAAGATATCACTCACGTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AGSTLGSLSGLP*CYTGRYHSRSV Trigger: GACAGAACGTGAGTGATATCTTCCGGTATAGCAGCATGGAAGACCACTTAGAGATCCTAGAGTGGACCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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| CDS CCA 72 bp | GAACTGAAGTCAGGAACAGCCACTAACAGCACTACCTaGTCCTCAGGACCTCGGATGATTTTGGAACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ELKSGTATNSTT*SSGPRMILEPK Trigger: CTTTGGTTCCAAAATCATCCGAGGTCCTGAGGACCAGGTAGTGCTGTTAGTGGCTGTTCCTGACTTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102922.10 |
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