Pregenerated sensors for POLB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031536Ensembl transcript IDs: ENSMUST00000033938.7, ENSMUST00000210950.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACTGCCCTaGAATCTTGCACTGACTGTCCTGCCTCTACTGCCCACCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LGSLSSTRHSPGKLP*NLALTVLPLLPTFL Trigger: TAGGAAGGTGGGCAGTAGAGGCAGGACAGTCAGTGCAAGATTGCAGGGCAGTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | ACGAAGTACTACATACAACTCTCTGACAGTCAGTGTGCGTCTCCCTaGGAGCTCCCACCACTCTTCCTTCCTGTGGGCGCTCACGCTACA | + |
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Preference number: 1 (lower is better) Translates to: TKYYIQLSDSQCASP*ELPPLFLPVGAHAT Trigger: TGTAGCGTGAGCGCCCACAGGAAGGAAGAGTGGTGGGAGCTCTCAGGGAGACGCACACTGACTGTCAGAGAGTTGTATGTAGTACTTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR GCA 90 bp | TGCATGTTGGGGCTTATAACCAGGGAACAGGGCTTCAGAGCTGGTTaGTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: CMLGLITREQGFRAG*SHVGVSQLYSAFSR Trigger: CCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGCCCCAACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | CCATTCCGAGGTACCTGTTTGCTGGATTCTGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATGTCTCCACTCGACTCTGCGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PFRGTCLLDSDVKFG*VSRTSMSPLDSAPL Trigger: AAGAGGCGCAGAGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGGTACCTCGGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | GCTTATAACCAGGGAACAGGGCTTCAGAGCTGGTTGCTCTCATGTTaGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: AYNQGTGLQSWLLSC*GLSALLGILQGNCP Trigger: AGGGCAGTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | CCTGTGCATGTTGGGGCTTATAACCAGGGAACAGGGCTTCAGAGCTaGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: PVHVGAYNQGTGLQS*LLSCWGLSALLGIL Trigger: GAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGCCCCAACATGCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | AGGCAGAGAAACAACTTTAGAGTGTTAGCTCTCTCCCCCACCATGTaGGTGCAGGGACTGAACCCGAATGACAAGCAGCTTCACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RQRNNFRVLALSPTM*VQGLNPNDKQLHLL Trigger: CAGCAAGTGAAGCTGCTTGTCATTCGGGTTCAGTCCCTGCACCCACATGGTGGGGGAGAGAGCTAACACTCTAAAGTTGTTTCTCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | GCCTGTAGCTATATTTCTAGGGAACCAACAGAGACCTCTGGTCTCTaGGGGCACCTGTGCTCACACACACACTCCTACACAGACACAAGT | + |
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Preference number: 1 (lower is better) Translates to: ACSYISREPTETSGL*GHLCSHTHSYTDTS Trigger: ACTTGTGTCTGTGTAGGAGTGTGTGTGTGAGCACAGGTGCCCTCAGAGACCAGAGGTCTCTGTTGGTTCCCTAGAAATATAGCTACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | CATTTGGTTATCCATTCCGAGGTACCTGTTTGCTGGATTCTGACGTaGAGTTTGGGTGGGTCAGCAGGACATCCATGTCTCCACTCGACT | + |
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Preference number: 1 (lower is better) Translates to: HLVIHSEVPVCWILT*SLGGSAGHPCLHST Trigger: AGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGGTACCTCGGAATGGATAACCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR GCA 90 bp | GAGAACACACAGGCGTTCACATCTCAAGAGTGGCTCTTGTCCCCATaGCTACCTGTCACCAAGGATCTCCTTCATGTTAGGTATTCATCC | + |
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Preference number: 1 (lower is better) Translates to: ENTQAFTSQEWLLSP*LPVTKDLLHVRYSS Trigger: GGATGAATACCTAACATGAAGGAGATCCTTGGTGACAGGTAGGCATGGGGACAAGAGCCACTCTTGAGATGTGAACGCCTGTGTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | GATCACATTTGGTTATCCATTCCGAGGTACCTGTTTGCTGGATTCTaGCGTGAAGTTTGGGTGGGTCAGCAGGACATCCATGTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: DHIWLSIPRYLFAGF*REVWVGQQDIHVST Trigger: AGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGGTACCTCGGAATGGATAACCAAATGTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | GCTCCCACCACTCTTCCTTCCTGTGGGCGCTCACGCTACAAGTTATaGATTTTTATTTGCAAGACCTATGTGGTACTGTTCGTGGCATAT | + |
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Preference number: 1 (lower is better) Translates to: APTTLPSCGRSRYKL*IFICKTYVVLFVAY Trigger: ATATGCCACGAACAGTACCACATAGGTCTTGCAAATAAAAATTCATAACTTGTAGCGTGAGCGCCCACAGGAAGGAAGAGTGGTGGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | CTGAGTCCCATGCTGTTTCCTTTAAAAAGAGAAGTTACTTGGGATTaGAAAGATGGCTCAGTGGTTAAGAACACTTACCGTTCCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LSPMLFPLKREVTWD*KDGSVVKNTYRSSR Trigger: TCTGGAGGAACGGTAAGTGTTCTTAACCACTGAGCCATCTTTCCAATCCCAAGTAACTTCTCTTTTTAAAGGAAACAGCATGGGACTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | TATGTCCTGAGTCCCATGCTGTTTCCTTTAAAAAGAGAAGTTACTTaGGATTGGAAAGATGGCTCAGTGGTTAAGAACACTTACCGTTCC | + |
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Preference number: 1 (lower is better) Translates to: YVLSPMLFPLKREVT*DWKDGSVVKNTYRS Trigger: GGAACGGTAAGTGTTCTTAACCACTGAGCCATCTTTCCAATCCCAAGTAACTTCTCTTTTTAAAGGAAACAGCATGGGACTCAGGACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | GTGCAAGTGATGAGATTCAAGGACCCACCATGTCTGACCATCAAATaGAACAATTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VQVMRFKDPPCLTIK*NNFFFLETTYMGLE Trigger: CTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAATTGTTTCATTTGATGGTCAGACATGGTGGGTCCTTGAATCTCATCACTTGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | AGACCTATGTGGTACTGTTCGTGGCATATTTTTATCTATAAACGCTaGCTTATCATGGAAAACAGTAAGAGAACACACAGGCGTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: RPMWYCSWHIFIYKR*LIMENSKRTHRRSH Trigger: ATGTGAACGCCTGTGTGTTCTCTTACTGTTTTCCATGATAAGCCAGCGTTTATAGATAAAAATATGCCACGAACAGTACCACATAGGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 90 bp | CTGAGTTATGCTTTATTTATGAGTTATGAGTTACTTTTTATGGTGTaGGGAGCATCAGCAGATGCCTCTCACAGAGATTCACTCACTCAT | + |
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Preference number: 1 (lower is better) Translates to: LSYALFMSYELLFMV*GASADASHRDSLTH Trigger: ATGAGTGAGTGAATCTCTGTGAGAGGCATCTGCTGATGCTCCTCACACCATAAAAAGTAACTCATAACTCATAAATAAAGCATAACTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 90 bp | GGCGCTCACGCTACAAGTTATGAATTTTTATTTGCAAGACCTATGTaGTACTGTTCGTGGCATATTTTTATCTATAAACGCTGGCTTATC | + |
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Preference number: 1 (lower is better) Translates to: GAHATSYEFLFARPM*YCSWHIFIYKRWLI Trigger: GATAAGCCAGCGTTTATAGATAAAAATATGCCACGAACAGTACCACATAGGTCTTGCAAATAAAAATTCATAACTTGTAGCGTGAGCGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCACCTTCCTATTCGTGTTCTCCCTCTCCCTCTCTCTCTCCCCCTCCCCCAAGACCATGGAAGGATaGCACAGGGACGTCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPTFLFVFSLSLSLSPSPKTMEG*HRDVPL Trigger: AAGAGGGACGTCCCTGTGCCATCCTTCCATGGTCTT...GGGGGAGGGGGAGAGAGAGAGGGAGAGGGAGAACACGAATAGGAAGGTGGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACTGTCCTGCCTCTACTGCCCACCTTCCTATTCGTGTTCTCCCTCTCCCTCTGGCTCTTGTCCCCATaGCTACCTGTCACCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LTVLPLLPTFLFVFSLSLWLLSP*LPVTKD Trigger: ATCCTTGGTGACAGGTAGGCATGGGGACAAGAGCCA...GAGGGAGAGGGAGAACACGAATAGGAAGGTGGGCAGTAGAGGCAGGACAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CAA 90 bp | GTGCATGTTGGGGCTTATAACCAGGGAACAGGGCTTCAGAGCTGGTaGCTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VHVGAYNQGTGLQSW*LSCWGLSALLGILQ Trigger: CTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGCCCCAACATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTCTCTCCCCCACCATGTGGGTGCAGGGACTGAACCCGAATGACAAGCAGGTGTCCTGGCTCATGTaGCATCAGACAGATGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LALSPTMWVQGLNPNDKQVSWLM*HQTDVS Trigger: ACTTACATCTGTCTGATGTCACATGAGCCAGGACAC...CTGCTTGTCATTCGGGTTCAGTCCCTGCACCCACATGGTGGGGGAGAGAGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTCTCTCCCCCACCATGTGGGTGCAGGGACTGAACCCGAATGACAAGCAGCTCTGTAACTCACTTTaGCTCTCACAGGACACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LALSPTMWVQGLNPNDKQLCNSL*LSQDTV Trigger: GACTGTGTCCTGTGAGAGGCAAAGTGAGTTACAGAG...CTGCTTGTCATTCGGGTTCAGTCCCTGCACCCACATGGTGGGGGAGAGAGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCACCTTCCTATTCGTGTTCTCCCTCTCCCTCTCTCTCTCCCCCTCCCCCCTACTATGGGTTTCTTaGTCTTCTATTTTAGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LPTFLFVFSLSLSLSPSPLLWVS*SSILVD Trigger: GTCCACTAAAATAGAAGATCAAGAAACCCATAGTAG...GGGGGAGGGGGAGAGAGAGAGGGAGAGGGAGAACACGAATAGGAAGGTGGGCAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACCCCAGCAACCACAGGTaGCTCATAAGCATCTACATT | + |
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Preference number: 2 (lower is better) Translates to: WLLSCWGLSALLGILQGNPSNHR*LISIYI Trigger: AATGTAGATGCTTATGAGCCACCTGTGGTTGCTGGG...GTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGGGCTTCAGAGCTGGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTAGGACCCACCATGTCTaGCCATCAAATGAAACAATT | + |
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Preference number: 2 (lower is better) Translates to: GNRASELVALMLGSLSSTRTHHV*PSNETI Trigger: AATTGTTTCATTTGATGGTCAGACATGGTGGGTCCT...AGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTCTTCCACTCTCCCCCACCATGTaGGTGCAGGGACTGAACCCG | + |
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Preference number: 2 (lower is better) Translates to: FLFLRNYLYGAGEMAALPLSPTM*VQGLNP Trigger: CGGGTTCAGTCCCTGCACCCACATGGTGGGGGAGAG...TGGAAGAGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCACTCGACTCTGCGCCTCTTCTGAAACTGCCACAGACTGTAGCAATGTAACAATATCCTGCATCTaGAGCATTTCCTCACGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSTRLCASSETATDCSNVTISCI*SISSRG Trigger: TCCTCGTGAGGAAATGCTGCAGATGCAGGATATTGT...TACATTGCTACAGTCTGTGGCAGTTTCAGAAGAGGCGCAGAGTCGAGTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAAAGTGAACCCAGGGCCTTAGTCTCTGCCACTAAGCTATGTCTGCTACCCTGTACTCTTTTCTaGCATGCAAGCATACATGTA | + |
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Preference number: 2 (lower is better) Translates to: VLESEPRALVSATKLCLLPCTLF*HASIHV Trigger: TACATGTATGCTTGCATGTCAGAAAAGAGTACAGGG...TAGCAGACATAGCTTAGTGGCAGAGACTAAGGCCCTGGGTTCACTTTCCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAACAGGGCTTCAGAGCTGGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTCACTTATGTTTAATTTaGAGCAATACTCTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GNRASELVALMLGSLSSTHLCLI*SNTLCV Trigger: CACACACAGAGTATTGCTGCAAATTAAACATAAGTG...AGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAATTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTAGGGGGTCAGCAGGATaGCATTCAGGGGACACCAGT | + |
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Preference number: 2 (lower is better) Translates to: KQFLFLRNYLYGAGEMAARGSAG*HSGDTS Trigger: ACTGGTGTCCCCTGAATGTCATCCTGCTGACCCCCT...AGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAATTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCTAGGCACGAAGTACTACATACAACTCTCTGACAGTCAGTGTGCGTCTAAGACAGATCACATTTaGTTATCCATTCCGAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LWLGTKYYIQLSDSQCASKTDHI*LSIPRY Trigger: GTACCTCGGAATGGATAACCAAATGTGATCTGTCTT...AGACGCACACTGACTGTCAGAGAGTTGTATGTAGTACTTCGTGCCTAGCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCTAGGCACGAAGTACTACATACAACTCTCTGACAGTCAGTGTGCGTCTTTAAGTACAATATCCTaGATCTGCAGCATTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LWLGTKYYIQLSDSQCASLSTIS*ICSISS Trigger: TGAGGAAATGCTGCAGATGCAGGATATTGTACTTAA...AGACGCACACTGACTGTCAGAGAGTTGTATGTAGTACTTCGTGCCTAGCCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LHRHKCIIKDISLQNYLLKSACL*LPSAGL Trigger: AAGCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTT...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCCCTGCAATCTTGCACTaGCTGTCCTGCCTCTACTGC | + |
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Preference number: 2 (lower is better) Translates to: LHRHKCIIKDISLQNYLLPAILH*LSCLYC Trigger: GCAGTAGAGGCAGGACAGTCAGTGCAAGATTGCAGG...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTCTTCCAACACACGCGTACACATaGAGAGGCAGAGAAACAACT | + |
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Preference number: 2 (lower is better) Translates to: FLFLRNYLYGAGEMAALPTHAYT*RGRETT Trigger: AGTTGTTTCTCTGCCTCTGCATGTGTACGCGTGTGT...TGGAAGAGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAATTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATG | + |
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Preference number: 2 (lower is better) Translates to: KQFLFLRNYLYGAGEMAADVKFG*VSRTSM Trigger: CATGGATGTCCTGCTGACCCACCCAAACTTCACGTC...AGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAATTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CCA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCTTCACATCTCAAGAGTaGCTCTTGTCCCCATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: LHRHKCIIKDISLQNYLLFTSQE*LLSPCL Trigger: TAGGCATGGGGACAAGAGCCACTCTTGAGATGTGAA...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCTTACTTTTTATGGTGTaGGGAGCATCAGCAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: LHRHKCIIKDISLQNYLLLLFMV*GASADA Trigger: GGCATCTGCTGATGCTCCTCACACCATAAAAAGTAA...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR TCA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCCATAAGCATCTACATTaGGACCCTGTACTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LHRHKCIIKDISLQNYLLHKHLH*DPVLFS Trigger: AGAAAAGAGTACAGGGTCTCAATGTAGATGCTTATG...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 72 bp | CTCCCCCACCATGTGGGTGCAGGGACTGAACCCGAATaGCAAGCAGCTTCACTTGCTGAGCCATATCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LPHHVGAGTEPE*QAASLAEPYLW Trigger: CCAGAGATATGGCTCAGCAAGTGAAGCTGCTTGTCATTCGGGTTCAGTCCCTGCACCCACATGGTGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAACAGGGCTTCAGAGCTGGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTTCTCAAGAGTGGCTCTaGTCCCCATGCCTACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GNRASELVALMLGSLSSTSQEWL*SPCLPV Trigger: GACAGGTAGGCATGGGGACAAGAGCCACTCTTGAGA...AGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR TCA 72 bp | TACATACAACTCTCTGACAGTCAGTGTGCGTCTCCCTaGGAGCTCCCACCACTCTTCCTTCCTGTGGGCGCT | + |
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Preference number: 3 (lower is better) Translates to: YIQLSDSQCASP*ELPPLFLPVGA Trigger: AGCGCCCACAGGAAGGAAGAGTGGTGGGAGCTCTCAGGGAGACGCACACTGACTGTCAGAGAGTTGTATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCAAGTGCTGGGCTTAAAGGCGTaGACCACCACTGCCCGGTTAGCTCTTTTTAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: PASASQVLGLKA*TTTARLALFKK Trigger: CTTTTTAAAAAGAGCTAACCGGGCAGTGGTGGTGCACGCCTTTAAGCCCAGCACTTGGGAGGCAGAGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR GCA 72 bp | GGGCTTATAACCAGGGAACAGGGCTTCAGAGCTGGTTaGTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCA | + |
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Preference number: 3 (lower is better) Translates to: GLITREQGFRAG*SHVGVSQLYSA Trigger: TGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR CCA 72 bp | GTTGGGGCTTATAACCAGGGAACAGGGCTTCAGAGCTaGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTC | + |
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Preference number: 3 (lower is better) Translates to: VGAYNQGTGLQS*LLSCWGLSALL Trigger: GAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCAGCTCTGAAGCCCTGTTCCCTGGTTATAAGCCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTTGCTCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACGACAAGCAGCTTCACTaGCTGAGCCATATCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLLSCWGLSALLGILQGNDKQLH*LSHISG Trigger: GCCAGAGATATGGCTCAGCAAGTGAAGCTGCTTGTC...GTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGAGCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | GGTACCTGTTTGCTGGATTCTGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATGTCTCCACTCGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTCLLDSDVKFG*VSRTSMSPLDS Trigger: AGAGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR TCA 72 bp | ATCCATTCCGAGGTACCTGTTTGCTGGATTCTGACGTaGAGTTTGGGTGGGTCAGCAGGACATCCATGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IHSEVPVCWILT*SLGGSAGHPCL Trigger: GAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGGTACCTCGGAATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | CGTCTCCCTGAGAGCTCCCACCACTCTTCCTTCCTGTaGGCGCTCACGCTACAAGTTATGAATTTTTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: RLPESSHHSSFL*ALTLQVMNFYL Trigger: CAAATAAAAATTCATAACTTGTAGCGTGAGCGCCCACAGGAAGGAAGAGTGGTGGGAGCTCTCAGGGAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | AAAGAGAAGTTACTTGGGATTGGAAAGATGGCTCAGTaGTTAAGAACACTTACCGTTCCTCCAGATGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEKLLGIGKMAQ*LRTLTVPPDDP Trigger: GGGGTCATCTGGAGGAACGGTAAGTGTTCTTAACCACTGAGCCATCTTTCCAATCCCAAGTAACTTCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | AAAGCAATACTCCTTCTGCGTAAGACAGATCACATTTaGTTATCCATTCCGAGGTACCTGTTTGCTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: KAILLLRKTDHI*LSIPRYLFAGF Trigger: GAATCCAGCAAACAGGTACCTCGGAATGGATAACCAAATGTGATCTGTCTTACGCAGAAGGAGTATTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACACAGACACAAGTGCATCATTAAAGACATAAGTCTCCAAAATTACTTACTCACCAACCTGTGCATGTaGGGGCTTATAACCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LHRHKCIIKDISLQNYLLTNLCM*GLITRE Trigger: TTCCCTGGTTATAAGCCCCAACATGCACAGGTTGGT...GAGTAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR GCA 72 bp | CCTGTGCTCACACACACACTCCTACACAGACACAAGTaGATCATTAAAGACATAAGTCTCCAAAATTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: PVLTHTLLHRHK*IIKDISLQNYL Trigger: TAAGTAATTTTGGAGACTTATGTCTTTAATGATGCACTTGTGTCTGTGTAGGAGTGTGTGTGTGAGCACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR TCA 72 bp | GACAGGAGAGAGATAAGAAAACTACTATGGGTTTCTTaGTCTTCTATTTTAGTGGACAAGACCATGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DRREIRKLLWVS*SSILVDKTMEG Trigger: TCCTTCCATGGTCTTGTCCACTAAAATAGAAGATCAAGAAACCCATAGTAGTTTTCTTATCTCTCTCCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | TGGTACTGTTCGTGGCATATTTTTATCTATAAACGCTaGCTTATCATGGAAAACAGTAAGAGAACACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: WYCSWHIFIYKR*LIMENSKRTHR Trigger: CCTGTGTGTTCTCTTACTGTTTTCCATGATAAGCCAGCGTTTATAGATAAAAATATGCCACGAACAGTACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR CCA 72 bp | ATGCTGTTTCCTTTAAAAAGAGAAGTTACTTGGGATTaGAAAGATGGCTCAGTGGTTAAGAACACTTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: MLFPLKREVTWD*KDGSVVKNTYR Trigger: ACGGTAAGTGTTCTTAACCACTGAGCCATCTTTCCAATCCCAAGTAACTTCTCTTTTTAAAGGAAACAGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAATTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTTTTCAGCCCAATTCGTaGATGATGGTTCAGTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: KQFLFLRNYLYGAGEMAAFQPNS*MMVQFI Trigger: GATAAACTGAACCATCATCAACGAATTGGGCTGAAA...AGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAATTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| 3UTR TCA 72 bp | TCTCACTTTACTGAGTTATGCTTTATTTATGAGTTATaGGTTACTTTTTATGGTGTGAGGAGCATCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHFTELCFIYEL*VTFYGVRSISR Trigger: TCTGCTGATGCTCCTCACACCATAAAAAGTAACTCATAACTCATAAATAAAGCATAACTCAGTAAAGTGAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR GCA 90 bp | GAGCATCAGCAGATGCCTCTCACAGAGATTCACTCACTCATTTGTTCCCTCACTCCGTTGAGGGTCTCCTaGGGCGCCTTGCGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHQQMPLTEIHSLICSLTPLRVS*GALRLL Trigger: GAGCAAACGCAAGGCGCCGCAGGAGACCCTCAACGG...AGTGAGGGAACAAATGAGTGAGTGAATCTCTGTGAGAGGCATCTGCTGATGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGGGCTTCCATCCTTCTCGCTaGGAAGCTGGCAAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRNKLGLLVGCAWGWQGFHPSR*EAGKHP Trigger: TGGGTGTTTGCCAGCTTCCCAGCGAGAAGGATGGAA...GCCCTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCTAGGCACGAAGTACTACATACAACTCTCTGACAGTCAGTGTGCGTCTCTTCCGCTCCGCTCTTaGTTTTGTGTGGGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLGTKYYIQLSDSQCASLPLRS*FCVGTW Trigger: CCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAG...AGACGCACACTGACTGTCAGAGAGTTGTATGTAGTACTTCGTGCCTAGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGTACGCATTGTACTTGTaGATCGCCTGGCTCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRNKLGLLVGCAWGWQYALYL*IAWLTF Trigger: GAACGTGAGCCAGGCGATCCACAAGTACAATGCGTA...CTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGGGCTTTTGTGTGGGTACTTaGCTATCACAGATGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLRNKLGLLVGCAWGWQGFCVGT*LSQMPL Trigger: AAGCGGCATCTGTGATAGCCAAGTACCCACACAAAA...GCCCTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGCCGTTGAGGGTCTCCTaGGGCGCCTTGCGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKPLRVS*GALRLL Trigger: GAGCAAACGCAAGGCGCCGCAGGAGACCCTCAACGG...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGCTCTTGTCCCCATGCCTACCTGTCACCAAGGATCTCCTTCATGTTTTTTGTGTGGGTACTTaGCTATCACAGATGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEWLLSPCLPVTKDLLHVFCVGT*LSQMPL Trigger: AAGCGGCATCTGTGATAGCCAAGTACCCACACAAAA...AACATGAAGGAGATCCTTGGTGACAGGTAGGCATGGGGACAAGAGCCACTCTTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGATCTACAAACTTCCTTaGAGCAGATGGTCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRNKLGLLVGCAWGWQIYKLP*SRWSNA Trigger: GGCATTGGACCATCTGCTGCAAGGAAGTTTGTAGAT...CTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGTTTTGTTCCTACTCCTaGCAGTTTCTTAGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRNKLGLLVGCAWGWQFCSYS*QFLSFR Trigger: GCGGAAGCTAAGAAACTGCCAGGAGTAGGAACAAAA...CTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGGGCATCGATTCTCCTGTGTaGATATTCCTTTCCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLRNKLGLLVGCAWGWQGIDSPV*IFLSIL Trigger: AAGGATGGAAAGGAATATCCACACAGGAGAATCGAT...GCCCTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | AGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGGGCCTTTGTTTCACCCTTTaGCAGAGTATCTGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRNKLGLLVGCAWGWQGLCFTL*QSICNE Trigger: TTCATTACAGATACTCTGTCAAAGGGTGAAACAAAG...GCCCTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| 3UTR CAA 72 bp | ACAAGACCATGGAAGGATGGCACAGGGACGTCCCTCTaGATGTTTTACCCAATGTCCTCTCTAAACACAATC | + |
|
Preference number: 4 (lower is better) Translates to: TRPWKDGTGTSL*MFYPMSSLNTI Trigger: GATTGTGTTTAGAGAGGACATTGGGTAAAACATCAAGAGGGACGTCCCTGTGCCATCCTTCCATGGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGCAGGAAATTGATGGATaGACTTGTATCATCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRNKLGLLVGCAWGWQQEIDG*TCIILT Trigger: CGTCAAGATGATACAAGTTCATCCATCAATTTCCTG...CTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTTAAGAAATAAATTAGGACTCCTAGTGGGCTGTGCCTGGGGCTGGCAGTTAAGTACAATATCCTaGATCTGCAGCATTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRNKLGLLVGCAWGWQLSTIS*ICSISS Trigger: TGAGGAAATGCTGCAGATGCAGGATATTGTACTTAA...CTGCCAGCCCCAGGCACAGCCCACTAGGAGTCCTAATTTATTTCTTAACCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTCTTCCATACGCATTGTACTTGTaGATCGCCTGGCTCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLRNYLYGAGEMAALPYALYL*IAWLTF Trigger: GAACGTGAGCCAGGCGATCCACAAGTACAATGCGTA...TGGAAGAGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKDVKFG*VSRTSM Trigger: CATGGATGTCCTGCTGACCCACCCAAACTTCACGTC...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAACTTCCGCTCCGCTCTTaGTTTTGTGTGGGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKLPLRS*FCVGTW Trigger: CCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAG...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGGTGGAAACACATATGAAAACTGTAACAACCCCCTAACCCTGTGGCTACAGGAAATTGATGGATaGACTTGTATCATCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KAGGNTYENCNNPLTLWLQEIDG*TCIILT Trigger: CGTCAAGATGATACAAGTTCATCCATCAATTTCCTG...TAGCCACAGGGTTAGGGGGTTGTTACAGTTTTCATATGTGTTTCCACCAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTCTTCCAGTTCTTCTCAAAGTTTaGGAGTTCCACGAGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLRNYLYGAGEMAALPVLLKV*EFHEHV Trigger: GACATGCTCGTGGAACTCGCAAACTTTGAGAAGAAC...TGGAAGAGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGCCCTTTTCCAGGGCGTaGGCTCTCATGTTCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKPFSRA*ALMFLL Trigger: TAATAAGAACATGAGAGCGCACGCCCTGGAAAAGGG...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGACAATATCCTGCATCTaGAGCATTTCCTCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKTISCI*SISSRG Trigger: TCCTCGTGAGGAAATGCTGCAGATGCAGGATATTGT...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAAAGATGTCACTCCCAGTaGAGTAGAGAACACCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKRCHSQ*SREHHS Trigger: ACTGTGGTGTTCTCTACTTCACTGGGAGTGACATCT...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| 3UTR CAA 72 bp | GGACAGGAGAGAGATAAGAAAACTACTATGGGTTTCTaGATCTTCTATTTTAGTGGACAAGACCATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQERDKKTTMGF*IFYFSGQDHGR Trigger: CCTTCCATGGTCTTGTCCACTAAAATAGAAGATCAAGAAACCCATAGTAGTTTTCTTATCTCTCTCCTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR GCA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCGTTCTTCTCAAAGTTTaGGAGTTCCACGAGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSSLLTIVHGKHREEAIVLLKV*EFHEHV Trigger: GACATGCTCGTGGAACTCGCAAACTTTGAGAAGAAC...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAACTCGAGTCAGGAAATTaGTGGATGAACTTGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKLESGN*WMNLYH Trigger: ATGATACAAGTTCATCCATCAATTTCCTGACTCGAG...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS-3UTR CAA 90 bp | TCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACTGCCCTGTCCGTGATGCCGCCGTaGAGGGTCTCCTGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHVGVSQLYSAFSRETALSVMPP*RVSCGA Trigger: GGCGCCGCAGGAGACCCTCAACGGCGGCATCACGGA...CAGGGCAGTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCCACCTTCCTATTCGTGTTCTCCCTCTCCCTCTCTCTCTCCCCCTCCCCCATTTTGTGTGGGTACTaGGCTATCACAGATGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTFLFVFSLSLSLSPSPILCGY*AITDAA Trigger: AGCGGCATCTGTGATAGCCAAGTACCCACACAAAAT...GGGGGAGGGGGAGAGAGAGAGGGAGAGGGAGAACACGAATAGGAAGGTGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS GCA 90 bp | CGCATTGTACTTGTGGATCGCCTGGCTCACGTTCTTCTCAAAGTTTaGGAGTTCCACGAGCATGTCCGTGATGCCGCCGTTGAGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIVLVDRLAHVLLKV*EFHEHVRDAAVEGL Trigger: GAGACCCTCAACGGCGGCATCACGGACATGCTCGTGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
||
| CDS-3UTR CAA 90 bp | TCTCATGTTGGGGTCTCTCAGCTCTACTCGGCATTCTCCAGGGAAACTGCCCTGGCTTCCGCTCCGCTCTaGATTTTGTGTGGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHVGVSQLYSAFSRETALASAPL*ILCGYL Trigger: CAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGC...CAGGGCAGTTTCCCTGGAGAATGCCGAGTAGAGCTGAGAGACCCCAACATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGTCCGTGATGCCGCCGTaGAGGGTCTCCTGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKSVMPP*RVSCGA Trigger: GGCGCCGCAGGAGACCCTCAACGGCGGCATCACGGA...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS CCA 90 bp | TGTAACAACTTTGGCTGTTTGCTGGATTCTGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATGTCTCCACTCGACTCTGCGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CNNFGCLLDSDVKFG*VSRTSMSPLDSAPL Trigger: AAGAGGCGCAGAGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS TCA 90 bp | CCACAACACGATGTAACAACTTTGGCTGTTTGCTGGATTCTGACGTaGAGTTTGGGTGGGTCAGCAGGACATCCATGTCTCCACTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: PQHDVTTLAVCWILT*SLGGSAGHPCLHST Trigger: AGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTTACATCGTGTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
||
| CDS CCA 90 bp | ATCACAGATGCCGCTTTTCTGTACGCATTGTACTTGTGGATCGCCTaGCTCACGTTCTTCTCAAAGTTTGCGAGTTCCACGAGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ITDAAFLYALYLWIA*LTFFSKFASSTSMS Trigger: GGACATGCTCGTGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCACTCGACTCTGCGCCTCTTCTGAAACTGCCACAGACTGTAGCAATGTACGTTCTTCTCAAAGTTaGCGAGTTCCACGAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTRLCASSETATDCSNVRSSQS*RVPRAC Trigger: ACATGCTCGTGGAACTCGCAAACTTTGAGAAGAACG...TACATTGCTACAGTCTGTGGCAGTTTCAGAAGAGGCGCAGAGTCGAGTGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| CDS CCA 90 bp | TACTTGGCTATCACAGATGCCGCTTTTCTGTACGCATTGTACTTGTaGATCGCCTGGCTCACGTTCTTCTCAAAGTTTGCGAGTTCCACG | + |
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Preference number: 5 (lower is better) Translates to: YLAITDAAFLYALYL*IAWLTFFSKFASST Trigger: CGTGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CCA 90 bp | TACTCCTGGCAGTTTCTTAGCTTCCGCTCCGCTCTTGATTTTGTGTaGGTACTTGGCTATCACAGATGCCGCTTTTCTGTACGCATTGTA | + |
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Preference number: 5 (lower is better) Translates to: YSWQFLSFRSALDFV*VLGYHRCRFSVRIV Trigger: TACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTGCCAGGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTCTTCCAGCTCCGCTCTTGATTTaGTGTGGGTACTTGGCTATC | + |
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Preference number: 5 (lower is better) Translates to: FLFLRNYLYGAGEMAALPAPLLI*CGYLAI Trigger: GATAGCCAAGTACCCACACAAAATCAAGAGCGGAGC...TGGAAGAGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| CDS-3UTR CAA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCGCTTCCGCTCCGCTCTaGATTTTGTGTGGGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: NSSSLLTIVHGKHREEAIASAPL*ILCGYL Trigger: CAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGC...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AAAGCTGGTGGAAACACATATGAAAACTGTAACAACCCCCTAACCCTGTGGCTAACTCGAGTCAGGAAATaGATGGATGAACTTGTATCA | + |
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Preference number: 5 (lower is better) Translates to: KAGGNTYENCNNPLTLWLTRVRK*MDELVS Trigger: TGATACAAGTTCATCCATCAATTTCCTGACTCGAGT...TAGCCACAGGGTTAGGGGGTTGTTACAGTTTTCATATGTGTTTCCACCAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAAGCTTTTCTGTACGCATaGTACTTGTGGATCGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKAFLYA*YLWIAW Trigger: CCAGGCGATCCACAAGTACAATGCGTACAGAAAAGC...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCGCTCCGCTCTTGATTTaGTGTGGGTACTTGGCTATC | + |
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Preference number: 5 (lower is better) Translates to: NSSSLLTIVHGKHREEAIAPLLI*CGYLAI Trigger: GATAGCCAAGTACCCACACAAAATCAAGAGCGGAGC...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS TCA 90 bp | AGCAGATGGTCCAATGCCAGTAACTCGAGTCAGGAAATTGATGGATaGACTTGTATCATCTTGACGAATCTTTTCCAGTTTACGCAATTT | + |
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Preference number: 5 (lower is better) Translates to: SRWSNASNSSQEIDG*TCIILTNLFQFTQF Trigger: AAATTGCGTAAACTGGAAAAGATTCGTCAAGATGATACAAGTTCATCCATCAATTTCCTGACTCGAGTTACTGGCATTGGACCATCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCCGTTCTTCTCAAAGTTaGCGAGTTCCACGAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: NSSSLLTIVHGKHREEAIRSSQS*RVPRAC Trigger: ACATGCTCGTGGAACTCGCAAACTTTGAGAAGAACG...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAAATTTTGTGTGGGTACTaGGCTATCACAGATGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKILCGY*AITDAA Trigger: AGCGGCATCTGTGATAGCCAAGTACCCACACAAAAT...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCCATCTACAAACTTCCTaGCAGCAGATGGTCCAATGC | + |
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Preference number: 5 (lower is better) Translates to: NSSSLLTIVHGKHREEAIHLQTS*QQMVQC Trigger: GCATTGGACCATCTGCTGCAAGGAAGTTTGTAGATG...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS TCA 90 bp | TTCCTGAGATCCAATGCCAGTAACTCGAGTCAGGAAATTGATGGATaGACTTGTATCATCTTGACGAATCTTTTCCAGTTTACGCAATTT | + |
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Preference number: 5 (lower is better) Translates to: FLRSNASNSSQEIDG*TCIILTNLFQFTQF Trigger: AAATTGCGTAAACTGGAAAAGATTCGTCAAGATGATACAAGTTCATCCATCAATTTCCTGACTCGAGTTACTGGCATTGGATCTCAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| CDS CCA 90 bp | CCCATGAACTTTGTTTCACCCTTTGACAGAGTATCTGTAATGAAATaGACTTTTTGTAACTGTTCCACAACACGATGTAACAACTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PMNFVSPFDRVSVMK*TFCNCSTTRCNNFG Trigger: GCCAAAGTTGTTACATCGTGTTGTGGAACAGTTACAAAAAGTCCATTTCATTACAGATACTCTGTCAAAGGGTGAAACAAAGTTCATGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGTTTCAGCCCAATTCGTaGATGATGGTTCAGTTTATC | + |
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Preference number: 5 (lower is better) Translates to: EKKQSLKNTKNPYIAKVKFQPNS*MMVQFI Trigger: GATAAACTGAACCATCATCAACGAATTGGGCTGAAA...CTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAAAACAACTTTGGCTGTTaGCTGGATTCTGACGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKNNFGC*LDSDVK Trigger: CTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTT...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AAACAATTTCTTTTTCTTAGAAACTACTTATATGGGGCTGGAGAGATGGCTGCTTCTTTTCAGCAATTTTaGTTCCTACTCCTGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KQFLFLRNYLYGAGEMAASFQQF*FLLLAV Trigger: AACTGCCAGGAGTAGGAACAAAAATTGCTGAAAAGA...AGCAGCCATCTCTCCAGCCCCATATAAGTAGTTTCTAAGAAAAAGAAATTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000210950.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGCAATCGCTTAAGAACACCAAAAACCCTTACATAGCAAAGGTTAAGAAATCTTTTCAGCAATTTTaGTTCCTACTCCTGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KKQSLKNTKNPYIAKVKKSFQQF*FLLLAV Trigger: AACTGCCAGGAGTAGGAACAAAAATTGCTGAAAAGA...TTTCTTAACCTTTGCTATGTAAGGGTTTTTGGTGTTCTTAAGCGATTGCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS-3UTR CAA 90 bp | AATAGCTCAAGTTTATTGACTATAGTACATGGTAAGCACAGAGAAGAAGCAATCACTCGAGTCAGGAAATaGATGGATGAACTTGTATCA | + |
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Preference number: 5 (lower is better) Translates to: NSSSLLTIVHGKHREEAITRVRK*MDELVS Trigger: TGATACAAGTTCATCCATCAATTTCCTGACTCGAGT...GATTGCTTCTTCTCTGTGCTTACCATGTACTATAGTCAATAAACTTGAGCTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS GCA 72 bp | CTTGTGGATCGCCTGGCTCACGTTCTTCTCAAAGTTTaGGAGTTCCACGAGCATGTCCGTGATGCCGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: LVDRLAHVLLKV*EFHEHVRDAAV Trigger: AACGGCGGCATCACGGACATGCTCGTGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CCA 72 bp | GCCGCTTTTCTGTACGCATTGTACTTGTGGATCGCCTaGCTCACGTTCTTCTCAAAGTTTGCGAGTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: AAFLYALYLWIA*LTFFSKFASST Trigger: CGTGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CCA 72 bp | TTTGGCTGTTTGCTGGATTCTGACGTGAAGTTTGGGTaGGTCAGCAGGACATCCATGTCTCCACTCGACTCT | + |
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Preference number: 6 (lower is better) Translates to: FGCLLDSDVKFG*VSRTSMSPLDS Trigger: AGAGTCGAGTGGAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS CAA 72 bp | CCTACTCCTGGCAGTTTCTTAGCTTCCGCTCCGCTCTaGATTTTGTGTGGGTACTTGGCTATCACAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: PTPGSFLASAPL*ILCGYLAITDA Trigger: GGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTGCCAGGAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 90 bp | GGGTACTTGGCTATCACAGATGCCGCTTTTCTGTACGCATTGTACTaGTGGATCGCCTGGCTCACGTTCTTCTCAAAGTTTGCGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GYLAITDAAFLYALY*WIAWLTFFSKFASS Trigger: GGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 90 bp | GTTCCTACTCCTGGCAGTTTCTTAGCTTCCGCTCCGCTCTTGATTTaGTGTGGGTACTTGGCTATCACAGATGCCGCTTTTCTGTACGCA | + |
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Preference number: 6 (lower is better) Translates to: VPTPGSFLASAPLLI*CGYLAITDAAFLYA Trigger: TGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTGCCAGGAGTAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 72 bp | CCTGGCAGTTTCTTAGCTTCCGCTCCGCTCTTGATTTaGTGTGGGTACTTGGCTATCACAGATGCCGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PGSFLASAPLLI*CGYLAITDAAF Trigger: AAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 90 bp | GGCAGTTTCTTAGCTTCCGCTCCGCTCTTGATTTTGTGTGGGTACTaGGCTATCACAGATGCCGCTTTTCTGTACGCATTGTACTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSFLASAPLLILCGY*AITDAAFLYALYLW Trigger: CCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS TCA 72 bp | GATGTAACAACTTTGGCTGTTTGCTGGATTCTGACGTaGAGTTTGGGTGGGTCAGCAGGACATCCATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DVTTLAVCWILT*SLGGSAGHPCL Trigger: GAGACATGGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS CCA 72 bp | ATCACAGATGCCGCTTTTCTGTACGCATTGTACTTGTaGATCGCCTGGCTCACGTTCTTCTCAAAGTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: ITDAAFLYALYL*IAWLTFFSKFA Trigger: CGCAAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 72 bp | TACTTGGCTATCACAGATGCCGCTTTTCTGTACGCATaGTACTTGTGGATCGCCTGGCTCACGTTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: YLAITDAAFLYA*YLWIAWLTFFS Trigger: TGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 72 bp | TTAGCTTCCGCTCCGCTCTTGATTTTGTGTGGGTACTaGGCTATCACAGATGCCGCTTTTCTGTACGCATTG | + |
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Preference number: 6 (lower is better) Translates to: LASAPLLILCGY*AITDAAFLYAL Trigger: CAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS GCA 72 bp | GCTCTTGATTTTGTGTGGGTACTTGGCTATCACAGATaGCGCTTTTCTGTACGCATTGTACTTGTGGATCGC | + |
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Preference number: 6 (lower is better) Translates to: ALDFVWVLGYHR*RFSVRIVLVDR Trigger: GCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CCA 72 bp | CAGTTTCTTAGCTTCCGCTCCGCTCTTGATTTTGTGTaGGTACTTGGCTATCACAGATGCCGCTTTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QFLSFRSALDFV*VLGYHRCRFSV Trigger: TACAGAAAAGCGGCATCTGTGATAGCCAAGTACCCACACAAAATCAAGAGCGGAGCGGAAGCTAAGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 72 bp | GCTATCACAGATGCCGCTTTTCTGTACGCATTGTACTaGTGGATCGCCTGGCTCACGTTCTTCTCAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AITDAAFLYALY*WIAWLTFFSKF Trigger: AAACTTTGAGAAGAACGTGAGCCAGGCGATCCACAAGTACAATGCGTACAGAAAAGCGGCATCTGTGATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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| CDS CAA 72 bp | AACTGTTCCACAACACGATGTAACAACTTTGGCTGTTaGCTGGATTCTGACGTGAAGTTTGGGTGGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NCSTTRCNNFGC*LDSDVKFGWVS Trigger: GCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTTACATCGTGTTGTGGAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS CAA 90 bp | ACTTTTTGTAACTGTTCCACAACACGATGTAACAACTTTGGCTGTTaGCTGGATTCTGACGTGAAGTTTGGGTGGGTCAGCAGGACATCC | + |
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Preference number: 6 (lower is better) Translates to: TFCNCSTTRCNNFGC*LDSDVKFGWVSRTS Trigger: GGATGTCCTGCTGACCCACCCAAACTTCACGTCAGAATCCAGCAAACAGCCAAAGTTGTTACATCGTGTTGTGGAACAGTTACAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033938.7 |
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| CDS TCA 72 bp | TCCAATGCCAGTAACTCGAGTCAGGAAATTGATGGATaGACTTGTATCATCTTGACGAATCTTTTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SNASNSSQEIDG*TCIILTNLFQF Trigger: AAACTGGAAAAGATTCGTCAAGATGATACAAGTTCATCCATCAATTTCCTGACTCGAGTTACTGGCATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033938.7 ENSMUST00000210950.2 |
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