Pregenerated sensors for POLA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024833Ensembl transcript IDs: ENSMUST00000025752.15, ENSMUST00000165143.3, ENSMUST00000235224.2, ENSMUST00000235535.2, ENSMUST00000236013.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGTCCCTGTaGCCAGATCCTTGTCAGGTACTCCAACAGTTTGGCCACCAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: WEAVTGRPSPTVLSL*PDPCQVLQQFGHQR Trigger: TCTCTGGTGGCCAAACTGTTGGAGTACCTGACAAGGATCTGGCCACAGGGACAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR TCA 90 bp | CTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
|
Preference number: 1 (lower is better) Translates to: LCVRMVVSHHVVAGI*TLDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR CCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: KYTVCTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGGCAGGCAGGCCACATGTCCCCAGGTCACCTTGCTATGGCCTATAGCCCTCTTCCACCAAGGGACTaGCTATTTGCCACCCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ERQAGHMSPGHLAMAYSPLPPRD*LFATPD Trigger: GTCAGGGGTGGCAAATAGTCAGTCCCTTGGTGGAAG...AGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| 3UTR CAA 90 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TVCTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCGGCTCTTGGTGTTTGTaGGGCCAGGCAACCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSIDGSRLYIYLMKQERSGSWCL*GQATRL Trigger: CAGCCTGGTTGCCTGGCCTCACAAACACCAAGAGCC...GCTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR-3UTR TCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGTCTCCGGGGCAGAATaGAGAATGCCGTGGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLVSGAE*RMPWLS Trigger: TGAGAGCCACGGCATTCTTCATTCTGCCCCGGAGAC...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTCTTTGTTTTCCCACATaGAGGGGCTATCTAGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CGCWDLNSGPSEEQSGALLCFPT*RGYLGV Trigger: AACTCCTAGATAGCCCCTCCATGTGGGAAAACAAAG...AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCCAGAGAGCCATACCTaGGCTCTTGGTGTTTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKPESHT*ALGVCE Trigger: CTCACAAACACCAAGAGCCCAGGTATGGCTCTCTGG...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR TCA 72 bp | CCACGCTGCATGGGGGTGAGGGACAGTGGGAAGCCGTaGCTGGACGGCCCAGCCCTACAGTCCTGTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRCMGVRDSGKP*LDGPALQSCPC Trigger: ACAGGGACAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCCATGCAGCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR TCA 72 bp | GGGCGTAATTCAGATCAGAGCCACGCTGCATGGGGGTaGGGGACAGTGGGAAGCCGTGACTGGACGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRNSDQSHAAWG*GTVGSRDWTAQ Trigger: CTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCCATGCAGCGTGGCTCTGATCTGAATTACGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR CCA 72 bp | GTGACTGGACGGCCCAGCCCTACAGTCCTGTCCCTGTaGCCAGATCCTTGTCAGGTACTCCAACAGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VTGRPSPTVLSL*PDPCQVLQQFG Trigger: GCCAAACTGTTGGAGTACCTGACAAGGATCTGGCCACAGGGACAGGACTGTAGGGCTGGGCCGTCCAGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR TCA 72 bp | AAGTTCACTTGTGAGTGGAGAGTCTCCGGGGCAGAATaGAGAATGCCGTGGCTCTCAGGGAGGGAGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KFTCEWRVSGAE*RMPWLSGRELP Trigger: TGGGAGCTCCCTCCCTGAGAGCCACGGCATTCTTCATTCTGCCCCGGAGACTCTCCACTCACAAGTGAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR CCA 72 bp | GTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: VCTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR TCA 72 bp | AACAAAGGCAACCACTCGGGCAGACAAGTTCACTTGTaGGTGGAGAGTCTCCGGGGCAGAATGAAGAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NKGNHSGRQVHL*VESLRGRMKNA Trigger: GGCATTCTTCATTCTGCCCCGGAGACTCTCCACTCACAAGTGAACTTGTCTGCCCGAGTGGTTGCCTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR GCA 72 bp | AGGGGCTATCTAGGAGTTGAGATGGGTGTCGCACACTaGAATCTTAGCACTCAAGAGGCTGAGGCAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: RGYLGVEMGVAH*NLSTQEAEAGQ Trigger: TTGTCCTGCCTCAGCCTCTTGAGTGCTAAGATTGCAGTGTGCGACACCCATCTCAACTCCTAGATAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR GCA 72 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVCTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| 3UTR TCA 72 bp | TGTGTCACTTTCTCACACTTCCTTCCACCAAGGGACTaGCTATTTGCCACCCCTGACCTCAGCAATCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVTFSHFLPPRD*LFATPDLSNQL Trigger: GAGCTGATTGCTGAGGTCAGGGGTGGCAAATAGTCAGTCCCTTGGTGGAAGGAAGTGTGAGAAAGTGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGCAGATTCTGACCACCTaGGCTGCCACGCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGQWEAVTGRPSPTVLQILTT*AATLRP Trigger: GGGCCTGAGCGTGGCAGCGCAGGTGGTCAGAATCTG...CAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGGAGGCTGCAGGGCTCTaGCACAAACTGCACTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGEGQWEAVTGRPSPTVLEAAGL*HKLHSL Trigger: AAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTC...CAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGAGAATAACAGGCTCTTaGGCTGGGACCAGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEGQWEAVTGRPSPTVLRITGS*AGTRRG Trigger: CCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCT...CAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | ATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAGCTTTGTAGCTGCCAGTaGGTGGCTCTGGGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGKPGQSAGKGRQATCPQLCSCQ*VALGPP Trigger: TGGGGGACCCAGAGCCACTCACTGGCAGCTACAAAG...CTGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTGAGGCTGCAGGGCTCTaGCACAAACTGCACTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPMGKPGQSAGKGRQATCEAAGL*HKLHSL Trigger: AAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTC...ACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | CCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PMGKPGQSAGKGRQATCPGTKTR*EPELLV Trigger: AACGAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...GGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCGGTGAAAGGCGGCTGTaGGTATACTGGCTCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HGGEGQWEAVTGRPSPTVGERRL*VYWLMM Trigger: CATCATGAGCCAGTATACCCACAGCCGCCTTTCACC...GACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | ATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAGACAGCTCGGAGAAGGTaGAAGGCGGCTGTGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: MGKPGQSAGKGRQATCPQTARRR*KAAVGI Trigger: TATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGT...CTGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAGGTCCGAGAATCACGGACTTaGTGTTCAGCTTCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKPGQSAGKGRQATCPQVRESRT*CSASRC Trigger: GCAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCG...GACCTGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGGCCACGCTCAGGCCCTaGCTGCCCCCACCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLPHEAGEKQGVIQIRATATLRP*LPPPSM Trigger: CATGGACGGTGGGGGCAGGCAGGGCCTGAGCGTGGC...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGGCCACATGTCCCCAGGTCACCTTGCTATGGCCTATAGCCCTCACTCCTCAGCCCCGATGTaGAACAGCAGGTCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHMSPGHLAMAYSPHSSAPM*NSRSVD Trigger: ATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGA...GTGAGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| 3UTR CAA 72 bp | GGGAAAGGCAGGCAGGCCACATGTCCCCAGGTCACCTaGCTATGGCCTATAGCCCTCACTCTGACACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGRQATCPQVT*LWPIALTLTPR Trigger: CCTAGGTGTCAGAGTGAGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR TCA 90 bp | CATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCATCGGCTGAATCTGTCTaGCGTCCCGGAAGAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGEARSECRERQAGHMSPSAESV*RPGRAK Trigger: TTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGA...TGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTTGTTCAGCTTCCCGTTaGTGTCGCAGCCAATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EPMGKPGQSAGKGRQATCCSASR*CRSQSD Trigger: GTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACA...ACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAGATGCAGACATCTGGCTaGTCACGGTTGATGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MGKPGQSAGKGRQATCPQMQTSG*SRLMMA Trigger: CGCCATCATCAACCGTGACCAGCCAGATGTCTGCAT...CTGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCAGGCCACATGTCCCCAGGTCACCTTGCTATGGCCTATAGCCCTCACGGGTATACTGGCTCATaGTGGACATCCCTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHMSPGHLAMAYSPHGYTGS*WTSLRD Trigger: GTCTCTGAGGGATGTCCATCATGAGCCAGTATACCC...GTGAGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | CCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCATTTATGGAGAGGCTaGAGGGCTCTGACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PMGKPGQSAGKGRQATCPHLWRG*RALTQT Trigger: AGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATG...GGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCCGCTCAGGCCCTGCCTaGCCCCACCGTCCATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSIDGSRLYIYLMKQERSRSGPA*PHRPWP Trigger: AGGCCATGGACGGTGGGGGCAGGCAGGGCCTGAGCG...GCTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | GAGCCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTACATCACTCCATTTATaGAGAGGCTGCAGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPMGKPGQSAGKGRQATCTSLHL*RGCRAL Trigger: CAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGT...ACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGCAACCACTCGGGCAGACAAGTTCACTTGTGAGTGGAGAGTCTCCGGGGAGGCTGCAGGGCTCTaGCACAAACTGCACTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKATTRADKFTCEWRVSGEAAGL*HKLHSL Trigger: AAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTC...CCCGGAGACTCTCCACTCACAAGTGAACTTGTCTGCCCGAGTGGTTGCCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGGCCACATGTCCCCAGGTCACCTTGCTATGGCCTATAGCCCTCACCAGGATGCAGACATCTaGCTGGTCACGGTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHMSPGHLAMAYSPHQDADI*LVTVDD Trigger: ATCATCAACCGTGACCAGCCAGATGTCTGCATCCTG...GTGAGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | GGGACTGACTATTTGCCACCCCTGACCTCAGCAATCAGCTCTGTGCTGGCCCTGGGTGAAAGGCGGCTGTaGGTATACTGGCTCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTDYLPPLTSAISSVLALGERRL*VYWLMM Trigger: CATCATGAGCCAGTATACCCACAGCCGCCTTTCACC...CAGGGCCAGCACAGAGCTGATTGCTGAGGTCAGGGGTGGCAAATAGTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGCAACCACTCGGGCAGACAAGTTCACTTGTGAGTGGAGAGTCTCCGGGTCCTCAGCCCCGATGTaGAACAGCAGGTCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKATTRADKFTCEWRVSGSSAPM*NSRSVD Trigger: ATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGA...CCCGGAGACTCTCCACTCACAAGTGAACTTGTCTGCCCGAGTGGTTGCCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCCACCAGAGAGCCATACCTGGGCTCTTGGTGTTTGTGAGGCCAGGCAATGTTCAGCTTCCCGTTaGTGTCGCAGCCAATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VWPPESHTWALGVCEARQCSASR*CRSQSD Trigger: GTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACA...TTGCCTGGCCTCACAAACACCAAGAGCCCAGGTATGGCTCTCTGGTGGCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGACTGACTATTTGCCACCCCTGACCTCAGCAATCAGCTCTGTGCTGGCCAAGGTCCGAACAGGATaGAGACATCTGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGTDYLPPLTSAISSVLAKVRTG*RHLAGH Trigger: GTGACCAGCCAGATGTCTGCATCCTGTTCGGACCTT...GGCCAGCACAGAGCTGATTGCTGAGGTCAGGGGTGGCAAATAGTCAGTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGGCCACATGTCCCCAGGTCACCTTGCTATGGCCTATAGCCCTCACCTCTGCGTCAGGATATaGTTAAGGACTCGGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHMSPGHLAMAYSPHLCVRI*LRTRLN Trigger: ATTCAGCCGAGTCCTTAAGCATATCCTGACGCAGAG...GTGAGGGCTATAGGCCATAGCAAGGTGACCTGGGGACATGTGGCCTGCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGCAACCACTCGGGCAGACAAGTTCACTTGTGAGTGGAGAGTCTCCGGGCTCCCCGGTTGGTTCTaGAGGTGTATTTCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKATTRADKFTCEWRVSGLPGWF*RCISGR Trigger: CCTCCCAGAAATACACCTCCAGAACCAACCGGGGAG...CCCGGAGACTCTCCACTCACAAGTGAACTTGTCTGCCCGAGTGGTTGCCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR TCA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGGCAGGGGGTCATAGGTaGTGCTGTCGGAGGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHEAGEKQGVIQIRATAGGHR*CCRRWY Trigger: ATACCACCTCCGACAGCATCACCTATGACCCCCTGC...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACAGCTCGGAGAAGGTaGAAGGCGGCTGTGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGPSEEQSGALTARRR*KAAVGI Trigger: TATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGT...AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAACAGTTTGGCCACCAGAGAGCCATACCTGGGCTCTTGGTGTTTGTGAGGATGCAGACATCTGGCTaGTCACGGTTGATGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQQFGHQRAIPGLLVFVRMQTSG*SRLMMA Trigger: CGCCATCATCAACCGTGACCAGCCAGATGTCTGCAT...CCTCACAAACACCAAGAGCCCAGGTATGGCTCTCTGGTGGCCAAACTGTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGCAGGGGGTCATAGGTaGTGCTGTCGGAGGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TVCTDGCEPPCGCWDLNSAGGHR*CCRRWY Trigger: ATACCACCTCCGACAGCATCACCTATGACCCCCTGC...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR TCA 90 bp | CCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGCTGCATTCGGCTGAATCTGTCTaGCGTCCCGGAAGAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHEAGEKQGVIQIRATLHSAESV*RPGRAK Trigger: TTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGA...ATGCAGCGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | CCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGCTGCATTCTCTGGTTCCTGCATaGCCACTGTCTTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHEAGEKQGVIQIRATLHSLVPA*PLSLEA Trigger: TGCCTCCAAAGACAGTGGGCATGCAGGAACCAGAGA...ATGCAGCGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | GTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACATGCCCACTGTCTTTaGAGGCACTGTGCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCTDGCEPPCGCWDLNSGHAHCL*RHCARL Trigger: AAGCCTGGCACAGTGCCTCCAAAGACAGTGGGCATG...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGGTAGCTGCCAGTGAGTaGCTCTGGGTCCCCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKVAASE*LWVPHD Trigger: GTCGTGGGGGACCCAGAGCCACTCACTGGCAGCTAC...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| 3UTR CAA 72 bp | CTTTCTCACACTTCCTTCCACCAAGGGACTGACTATTaGCCACCCCTGACCTCAGCAATCAGCTCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHTSFHQGTDY*PPLTSAISSVL Trigger: CAGCACAGAGCTGATTGCTGAGGTCAGGGGTGGCAAATAGTCAGTCCCTTGGTGGAAGGAAGTGTGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR TCA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGGGGTATACTGGCTCATaGTGGACATCCCTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPHEAGEKQGVIQIRATGYTGS*WTSLRD Trigger: GTCTCTGAGGGATGTCCATCATGAGCCAGTATACCC...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACGAGAATCACGGACTTaGTGTTCAGCTTCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCTDGCEPPCGCWDLNSGRESRT*CSASRC Trigger: GCAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCG...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAACAGTTTGGCCACCAGAGAGCCATACCTGGGCTCTTGGTGTTTGTGAGGCTCTGCGTCAGGATATaGTTAAGGACTCGGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQFGHQRAIPGLLVFVRLCVRI*LRTRLN Trigger: ATTCAGCCGAGTCCTTAAGCATATCCTGACGCAGAG...CCTCACAAACACCAAGAGCCCAGGTATGGCTCTCTGGTGGCCAAACTGTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | TTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGACTTTGTAGCTGCCAGTaGGTGGCTCTGGGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVSIDGSRLYIYLMKQERLCSCQ*VALGPP Trigger: TGGGGGACCCAGAGCCACTCACTGGCAGCTACAAAG...TCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | CTCTTACAGCGAGTTCTAGAAAATAGAAACAAAGGCAACCACTCGGGCAGACAACTTTGTAGCTGCCAGTaGGTGGCTCTGGGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQRVLENRNKGNHSGRQLCSCQ*VALGPP Trigger: TGGGGGACCCAGAGCCACTCACTGGCAGCTACAAAG...TTGTCTGCCCGAGTGGTTGCCTTTGTTTCTATTTTCTAGAACTCGCTGTAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGGTATACTGGCTCATaGTGGACATCCCTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVCTDGCEPPCGCWDLNSGYTGS*WTSLRD Trigger: GTCTCTGAGGGATGTCCATCATGAGCCAGTATACCC...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTAAGGTCCGAACAGGATaGAGACATCTGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVCTDGCEPPCGCWDLNSKVRTG*RHLAGH Trigger: GTGACCAGCCAGATGTCTGCATCCTGTTCGGACCTT...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGATGCAGACATCTGGCTaGTCACGGTTGATGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLMQTSG*SRLMMA Trigger: CGCCATCATCAACCGTGACCAGCCAGATGTCTGCAT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGCAGGATGCAGACATCTaGCTGGTCACGGTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHEAGEKQGVIQIRATQDADI*LVTVDD Trigger: ATCATCAACCGTGACCAGCCAGATGTCTGCATCCTG...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGGTGAAAGGCGGCTGTaGGTATACTGGCTCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLGERRL*VYWLMM Trigger: CATCATGAGCCAGTATACCCACAGCCGCCTTTCACC...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGTCCTCAGCCCCGATGTaGAACAGCAGGTCCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKSSAPM*NSRSVD Trigger: ATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGA...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGACAGCTCGGAGAAGGTaGAAGGCGGCTGTGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKTARRR*KAAVGI Trigger: TATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGT...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAAATGTCTCTGGTTCCTaGATGCCCACTGTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCTDGCEPPCGCWDLNSGNVSGS*MPTVFG Trigger: TCCAAAGACAGTGGGCATGCAGGAACCAGAGACATT...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGCATTTATGGAGAGGCTaGAGGGCTCTGACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHEAGEKQGVIQIRATHLWRG*RALTQT Trigger: AGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATG...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCTCCCCGGTTGGTTCTaGAGGTGTATTTCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKLPGWF*RCISGR Trigger: CCTCCCAGAAATACACCTCCAGAACCAACCGGGGAG...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTCAGGATGCAGACATCTaGCTGGTCACGGTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVCTDGCEPPCGCWDLNSQDADI*LVTVDD Trigger: ATCATCAACCGTGACCAGCCAGATGTCTGCATCCTG...AGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGACATCACTCCATTTATaGAGAGGCTGCAGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLTSLHL*RGCRAL Trigger: CAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCATTTATGGAGAGGCTaGAGGGCTCTGACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLHLWRG*RALTQT Trigger: AGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATG...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAGACCCTGCTTCAAAATaGTGCCCCTTCACAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCTDGCEPPCGCWDLNSGDPASK*CPFTKY Trigger: ATACTTTGTGAAGGGGCAGCATTTTGAAGCAGGGTC...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGACATGCCCACTGTCTTTaGAGGCACTGTGCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVSIDGSRLYIYLMKQERHAHCL*RHCARL Trigger: AAGCCTGGCACAGTGCCTCCAAAGACAGTGGGCATG...TCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTTTTCCTGCCTTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQFSCLCVHRWFTSVHLPGTKTR*EPELLV Trigger: AACGAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...AGGTAGATGTACAGACGTGAACCATCTATGGACACAAAGGCAGGAAAACTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTACAGCGAGTTCTAGAAAATAGAAACAAAGGCAACCACTCGGGCAGAGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRVLENRNKGNHSGRGTKTR*EPELLV Trigger: AACGAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...TCTGCCCGAGTGGTTGCCTTTGTTTCTATTTTCTAGAACTCGCTGTAAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CCA 90 bp | GTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCACATCACTCCATTTATaGAGAGGCTGCAGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSIDGSRLYIYLMKQERSTSLHL*RGCRAL Trigger: CAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGT...GCTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | CTCTTACAGCGAGTTCTAGAAAATAGAAACAAAGGCAACCACTCGGGCAGACAATCTCTGGTTCCTGCATaGCCACTGTCTTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQRVLENRNKGNHSGRQSLVPA*PLSLEA Trigger: TGCCTCCAAAGACAGTGGGCATGCAGGAACCAGAGA...TTGTCTGCCCGAGTGGTTGCCTTTGTTTCTATTTTCTAGAACTCGCTGTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGACGAGAATCACGGACTTaGTGTTCAGCTTCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVSIDGSRLYIYLMKQERRESRT*CSASRC Trigger: GCAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCG...TCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAAGGTCCGAACAGGATaGAGACATCTGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSIDGSRLYIYLMKQERKVRTG*RHLAGH Trigger: GTGACCAGCCAGATGTCTGCATCCTGTTCGGACCTT...TCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAATGTCTCTGGTTCCTaGATGCCCACTGTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVSIDGSRLYIYLMKQERNVSGS*MPTVFG Trigger: TCCAAAGACAGTGGGCATGCAGGAACCAGAGACATT...TCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR GCA 90 bp | AGACTCTTACAGCGAGTTCTAGAAAATAGAAACAAAGGCAACCACTCGGGCAGACTCTGCGTCAGGATATaGTTAAGGACTCGGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRVLENRNKGNHSGRLCVRI*LRTRLN Trigger: ATTCAGCCGAGTCCTTAAGCATATCCTGACGCAGAG...TCTGCCCGAGTGGTTGCCTTTGTTTCTATTTTCTAGAACTCGCTGTAAGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR TCA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTTCGGCTGAATCTGTCTaGCGTCCCGGAAGAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIIICKYTVCTDGCEPPCSAESV*RPGRAK Trigger: TTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGA...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTTGTTCAGCTTCCCGTTaGTGTCGCAGCCAATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FIIICKYTVCTDGCEPPCCSASR*CRSQSD Trigger: GTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACA...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | GGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGCACTCGGGGAGAAACTaGACGGTGAGAGAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGEGQWEAVTGRPSPTVLHSGRN*TVREAD Trigger: GTCAGCTTCTCTCACCGTCAAGTTTCTCCCCGAGTG...CAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CAA 90 bp | GGGGGTGAGGGACAGTGGGAAGCCGTGACTGGACGGCCCAGCCCTACAGTCCTGTCGAGAATCACGGACTaGCTGTTCAGCTTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGEGQWEAVTGRPSPTVLSRITD*LFSFPL Trigger: CAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCGA...CAGGACTGTAGGGCTGGGCCGTCCAGTCACGGCTTCCCACTGTCCCTCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS GCA 90 bp | ACTGACGCTTCCAGAGCCTCCTCTCCCGGACCAAGACAAGCCCTGTaGGGAGCCAAAGGTGGTCACCACTTCTCCCCGGTTGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDASRASSPGPRQAL*GAKGGHHFSPVGSG Trigger: TCCAGAACCAACCGGGGAGAAGTGGTGACCACCTTTGGCTCCGCACAGGGCTTGTCTTGGTCCGGGAGAGGAGGCTCTGGAAGCGTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 ENSMUST00000235535.2 |
||
| CDS GCA 90 bp | GCGCGCCATAGGAGTGCTCCTGGTCCCCCTCGAGAATCACGGACTTaGTGTTCAGCTTCCCGTTGCTGTCGCAGCCAATCTGACCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARHRSAPGPPRESRT*CSASRCCRSQSDPG Trigger: TCCTGGGTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCGAGGGGGACCAGGAGCACTCCTATGGCGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | AGCCTCCTCTCCCGGACCAAGACAAGCCCTGTGCGGAGCCAAAGGTaGTCACCACTTCTCCCCGGTTGGTTCTGGAGGTGTATTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSRTKTSPVRSQR*SPLLPGWFWRCISG Trigger: CCCAGAAATACACCTCCAGAACCAACCGGGGAGAAGTGGTGACCACCTTTGGCTCCGCACAGGGCTTGTCTTGGTCCGGGAGAGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTTCGAGAATCACGGACTaGCTGTTCAGCTTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPMGKPGQSAGKGRQATCSRITD*LFSFPL Trigger: CAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCGA...ACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | CATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAAACTGCACTCGCTTTTaGTCCTCTCGAGACAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HGEARSECRERQAGHMSPNCTRF*SSRDSS Trigger: CGAGCTGTCTCGAGAGGACAAAAAGCGAGTGCAGTT...TGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS TCA 90 bp | ATCACGGACTTGCTGTTCAGCTTCCCGTTGCTGTCGCAGCCAATCTaGCCCAGGAGAATAACAGGCTCTTGCGCTGGGACCAGGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITDLLFSFPLLSQPI*PRRITGSCAGTRRG Trigger: CCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACAGCAAGTCCGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 90 bp | GACAGCTCGGAGAAGGTGAAAGGCGGCTGTGGGTATACTGGCTCATaGTGGACATCCCTCAGAGACGGGACAAAGACAAGGTGGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSSEKVKGGCGYTGS*WTSLRDGTKTRWEP Trigger: CGGCTCCCACCTTGTCTTTGTCCCGTCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAACAGTTTGGCCACCAGAGAGCCATACCTGGGCTCTTGGTGTTTGTGAGGGCATGCCCACTGTCTTaGGAGGCACTGTGCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQQFGHQRAIPGLLVFVRACPLS*EALCQA Trigger: AGCCTGGCACAGTGCCTCCAAAGACAGTGGGCATGC...CCTCACAAACACCAAGAGCCCAGGTATGGCTCTCTGGTGGCCAAACTGTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS CCA 90 bp | GCTGTCGCAGCCAATCTGACCCAGGAGAATAACAGGCTCTTGCGCTaGGACCAGGAGAGGGGTAAAGGCCTCGATCTTGTGATGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVAANLTQENNRLLR*DQERGKGLDLVMLL Trigger: AAGGAGCATCACAAGATCGAGGCCTTTACCCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGCTGCGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | CTCTCGAGACAGCTCGGAGAAGGTGAAAGGCGGCTGTGGGTATACTaGCTCATGATGGACATCCCTCAGAGACGGGACAAAGACAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRQLGEGERRLWVY*LMMDIPQRRDKDKV Trigger: CACCTTGTCTTTGTCCCGTCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCTCCTACCAGTGGTGTaGAATCCTTCCATAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: PMGKPGQSAGKGRQATCPLLPVV*NPSIIT Trigger: TGTAATTATGGAAGGATTCAACACCACTGGTAGGAG...GGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | AAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGCATGCCCACTGTCTTaGGAGGCACTGTGCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYTVCTDGCEPPCGCWDLACPLS*EALCQA Trigger: AGCCTGGCACAGTGCCTCCAAAGACAGTGGGCATGC...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTACACACAGTGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | ATGGGGAAGCCAGGTCAGAGTGCAGGGAAAGGCAGGCAGGCCACATGTCCCCAGAACTGTTCTCAGGCATaGCTTGAAAACGTCTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: MGKPGQSAGKGRQATCPQNCSQA*LENVFE Trigger: TTCGAAGACGTTTTCAAGCAATGCCTGAGAACAGTT...CTGGGGACATGTGGCCTGCCTGCCTTTCCCTGCACTCTGACCTGGCTTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235535.2 |
||
| CDS TCA 90 bp | CAAACTGCACTCGCTTTTTGTCCTCTCGAGACAGCTCGGAGAAGGTaGAAGGCGGCTGTGGGTATACTGGCTCATGATGGACATCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTALAFCPLETARRR*KAAVGILAHDGHPS Trigger: TGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAGGACAAAAAGCGAGTGCAGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | CTTTTTGTCCTCTCGAGACAGCTCGGAGAAGGTGAAAGGCGGCTGTaGGTATACTGGCTCATGATGGACATCCCTCAGAGACGGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFVLSRQLGEGERRL*VYWLMMDIPQRRDK Trigger: TTTGTCCCGTCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAGGACAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 90 bp | ACTTCTCTGCGTCAGGATATGCTTAAGGACTCGGCTGAATCTGTCTaGCGTCCCGGAAGAGCTAAAGATCTCCTCAGCCCCGATGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLRQDMLKDSAESV*RPGRAKDLLSPDVE Trigger: TTCCACATCGGGGCTGAGGAGATCTTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGAGTCCTTAAGCATATCCTGACGCAGAGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | CTGTCTGACGTCCCGGAAGAGCTAAAGATCTCCTCAGCCCCGATGTaGAACAGCAGGTCCGTGGATGTCAAACCAAACATCACTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSDVPEELKISSAPM*NSRSVDVKPNITPF Trigger: AAATGGAGTGATGTTTGGTTTGACATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGAGATCTTTAGCTCTTCCGGGACGTCAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | CATCTACCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGAACTGCACTCGCTTTTaGTCCTCTCGAGACAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLPHEAGEKQGVIQIRATNCTRF*SSRDSS Trigger: CGAGCTGTCTCGAGAGGACAAAAAGCGAGTGCAGTT...CGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGGTAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS GCA 90 bp | GGTCCGTGGATGTCAAACCAAACATCACTCCATTTATGGAGAGGCTaGAGGGCTCTGACACAAACTGCACTCGCTTTTTGTCCTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPWMSNQTSLHLWRG*RALTQTALAFCPLE Trigger: CTCGAGAGGACAAAAAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGTTTGGTTTGACATCCACGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | GGAACAGCAGGTCCGTGGATGTCAAACCAAACATCACTCCATTTATaGAGAGGCTGCAGGGCTCTGACACAAACTGCACTCGCTTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTAGPWMSNQTSLHL*RGCRALTQTALAFC Trigger: ACAAAAAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGTTTGGTTTGACATCCACGGACCTGCTGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 90 bp | GAAGTTCTCGTAGTCTATGGCCATGTCCTCGTGGGGTGGATAAAGTaGGTAGTAACTTCTCTGCGTCAGGATATGCTTAAGGACTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVLVVYGHVLVGWIK*VVTSLRQDMLKDSA Trigger: AGCCGAGTCCTTAAGCATATCCTGACGCAGAGAAGTTACTACCCACTTTATCCACCCCACGAGGACATGGCCATAGACTACGAGAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | CCTCATGAAGCAGGAGAGAAGCAGGGCGTAATTCAGATCAGAGCCACGCTGCATCTCCTACCAGTGGTGTaGAATCCTTCCATAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: PHEAGEKQGVIQIRATLHLLPVV*NPSIIT Trigger: TGTAATTATGGAAGGATTCAACACCACTGGTAGGAG...ATGCAGCGTGGCTCTGATCTGAATTACGCCCTGCTTCTCTCCTGCTTCATGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS GCA 90 bp | GCTTCAATTAGCTCTTGTATAGAAACAATGTCTCTGGTTCCTGCATaGCCACTGTCTTTGGAGGCACTGTGCCAGGCTTTGGAGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASISSCIETMSLVPA*PLSLEALCQALESF Trigger: AAAACTCTCCAAAGCCTGGCACAGTGCCTCCAAAGACAGTGGGCATGCAGGAACCAGAGACATTGTTTCTATACAAGAGCTAATTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||
| CDS CCA 90 bp | ATAGGTATAGAAGTTCTCGTAGTCTATGGCCATGTCCTCGTGGGGTaGATAAAGTGGGTAGTAACTTCTCTGCGTCAGGATATGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGIEVLVVYGHVLVG*IKWVVTSLRQDMLK Trigger: CTTAAGCATATCCTGACGCAGAGAAGTTACTACCCACTTTATCCACCCCACGAGGACATGGCCATAGACTACGAGAACTTCTATACCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGCGCTTTGGAGAGTTTTTaGTTCAGAACCTCGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSIDGSRLYIYLMKQERSALESF*FRTSYS Trigger: TGAATACGAGGTTCTGAACAAAAAACTCTCCAAAGC...GCTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCATAGATGGTTCACGTCTGTACATCTACCTCATGAAGCAGGAGAGAAGAACTGTTCTCAGGCATaGCTTGAAAACGTCTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CVHRWFTSVHLPHEAGEKNCSQA*LENVFE Trigger: TTCGAAGACGTTTTCAAGCAATGCCTGAGAACAGTT...CTTCTCTCCTGCTTCATGAGGTAGATGTACAGACGTGAACCATCTATGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS-3UTR CAA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTTCGAGAATCACGGACTaGCTGTTCAGCTTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FIIICKYTVCTDGCEPPCSRITD*LFSFPL Trigger: CAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCGA...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGCGAGTTCTAGAAAATAGAAACAAAGGCAACCACTCGGGCAGACAACTCCTACCAGTGGTGTaGAATCCTTCCATAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: LLQRVLENRNKGNHSGRQLLPVV*NPSIIT Trigger: TGTAATTATGGAAGGATTCAACACCACTGGTAGGAG...TTGTCTGCCCGAGTGGTTGCCTTTGTTTCTATTTTCTAGAACTCGCTGTAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTAACTGCACTCGCTTTTaGTCCTCTCGAGACAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FIIICKYTVCTDGCEPPCNCTRF*SSRDSS Trigger: CGAGCTGTCTCGAGAGGACAAAAAGCGAGTGCAGTT...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTAACTGTTCTCAGGCATaGCTTGAAAACGTCTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FIIICKYTVCTDGCEPPCNCSQA*LENVFE Trigger: TTCGAAGACGTTTTCAAGCAATGCCTGAGAACAGTT...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTATTATATGTAAGTACACTGTGTGTACGGATGGTTGTGAGCCACCATGTGCTTTGGAGAGTTTTTaGTTCAGAACCTCGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FIIICKYTVCTDGCEPPCALESF*FRTSYS Trigger: TGAATACGAGGTTCTGAACAAAAAACTCTCCAAAGC...ACATGGTGGCTCACAACCATCCGTACACACAGTGTACTTACATATAATAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165143.3 |
||
| CDS GCA 72 bp | TCCAGAGCCTCCTCTCCCGGACCAAGACAAGCCCTGTaGGGAGCCAAAGGTGGTCACCACTTCTCCCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRASSPGPRQAL*GAKGGHHFSPV Trigger: AACCGGGGAGAAGTGGTGACCACCTTTGGCTCCGCACAGGGCTTGTCTTGGTCCGGGAGAGGAGGCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 ENSMUST00000235535.2 |
||
| CDS CAA 72 bp | CCTCCTGAGGTAGAGGCGGCCAAAGGTGCCGCCCACTaGTCCTTTGGTGAGCCGCCCAGGATTCACACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPEVEAAKGAAH*SFGEPPRIHTD Trigger: GTCTGTGTGAATCCTGGGCGGCTCACCAAAGGACAAGTGGGCGGCACCTTTGGCCGCCTCTACCTCAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS CAA 90 bp | CTTGGGCTGCCTCCTGAGGTAGAGGCGGCCAAAGGTGCCGCCCACTaGTCCTTTGGTGAGCCGCCCAGGATTCACACAGACACAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLPPEVEAAKGAAH*SFGEPPRIHTDTAK Trigger: TTTGGCTGTGTCTGTGTGAATCCTGGGCGGCTCACCAAAGGACAAGTGGGCGGCACCTTTGGCCGCCTCTACCTCAGGAGGCAGCCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025752.15 |
||
| CDS CCA 72 bp | TCCCGGACCAAGACAAGCCCTGTGCGGAGCCAAAGGTaGTCACCACTTCTCCCCGGTTGGTTCTGGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRTKTSPVRSQR*SPLLPGWFWRC Trigger: ACACCTCCAGAACCAACCGGGGAGAAGTGGTGACCACCTTTGGCTCCGCACAGGGCTTGTCTTGGTCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||
| CDS CAA 90 bp | CCCGTTGCTGTCGCAGCCAATCTGACCCAGGAGAATAACAGGCTCTaGCGCTGGGACCAGGAGAGGGGTAAAGGCCTCGATCTTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PVAVAANLTQENNRL*RWDQERGKGLDLVM Trigger: CATCACAAGATCGAGGCCTTTACCCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGCTGCGACAGCAACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 72 bp | GTAGCACTCGGGGAGAAACTTGACGGTGAGAGAAGCTaGCGTGGGCTGCGAGCAGCGACGCTCCTTTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VALGEKLDGERS*RGLRAATLLLV Trigger: AACCAAAAGGAGCGTCGCTGCTCGCAGCCCACGTCAGCTTCTCTCACCGTCAAGTTTCTCCCCGAGTGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||
| CDS GCA 72 bp | AGGAGTGCTCCTGGTCCCCCTCGAGAATCACGGACTTaGTGTTCAGCTTCCCGTTGCTGTCGCAGCCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: RSAPGPPRESRT*CSASRCCRSQS Trigger: AGATTGGCTGCGACAGCAACGGGAAGCTGAACAGCAAGTCCGTGATTCTCGAGGGGGACCAGGAGCACTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GAGCTGCTGAAACATCGCTTTGTAGCTGCCAGTGAGTaGCTCTGGGTCCCCCACGACCTTCAGACTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: ELLKHRFVAASE*LWVPHDLQTDA Trigger: AGCGTCAGTCTGAAGGTCGTGGGGGACCCAGAGCCACTCACTGGCAGCTACAAAGCGATGTTTCAGCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 ENSMUST00000235535.2 |
||
| CDS CAA 72 bp | TGTGCGGAGCCAAAGGTGGTCACCACTTCTCCCCGGTaGGTTCTGGAGGTGTATTTCTGGGAGGGGGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CAEPKVVTTSPR*VLEVYFWEGVA Trigger: TGCTACCCCCTCCCAGAAATACACCTCCAGAACCAACCGGGGAGAAGTGGTGACCACCTTTGGCTCCGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||
| CDS CAA 72 bp | GTCGCAGCCAATCTGACCCAGGAGAATAACAGGCTCTaGCGCTGGGACCAGGAGAGGGGTAAAGGCCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VAANLTQENNRL*RWDQERGKGLD Trigger: ATCGAGGCCTTTACCCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGCTGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 72 bp | TTGCTGTTCAGCTTCCCGTTGCTGTCGCAGCCAATCTaGCCCAGGAGAATAACAGGCTCTTGCGCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LLFSFPLLSQPI*PRRITGSCAGT Trigger: GGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGCTGCGACAGCAACGGGAAGCTGAACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | CTGAAACATCGCTTTGTAGCTGCCAGTGAGTGGCTCTaGGTCCCCCACGACCTTCAGACTGACGCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKHRFVAASEWL*VPHDLQTDASR Trigger: TCTGGAAGCGTCAGTCTGAAGGTCGTGGGGGACCCAGAGCCACTCACTGGCAGCTACAAAGCGATGTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GCCAATCTGACCCAGGAGAATAACAGGCTCTTGCGCTaGGACCAGGAGAGGGGTAAAGGCCTCGATCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANLTQENNRLLR*DQERGKGLDLV Trigger: CACAAGATCGAGGCCTTTACCCCTCTCCTGGTCCCAGCGCAAGAGCCTGTTATTCTCCTGGGTCAGATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | CAGCTCGGAGAAGGTGAAAGGCGGCTGTGGGTATACTaGCTCATGATGGACATCCCTCAGAGACGGGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLGEGERRLWVY*LMMDIPQRRDK Trigger: TTTGTCCCGTCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | CTCTCGAGACAGCTCGGAGAAGGTGAAAGGCGGCTGTaGGTATACTGGCTCATGATGGACATCCCTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSRQLGEGERRL*VYWLMMDIPQR Trigger: TCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 72 bp | GAGAAGGTGAAAGGCGGCTGTGGGTATACTGGCTCATaGTGGACATCCCTCAGAGACGGGACAAAGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EKVKGGCGYTGS*WTSLRDGTKTR Trigger: CCTTGTCTTTGTCCCGTCTCTGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 72 bp | CTCGCTTTTTGTCCTCTCGAGACAGCTCGGAGAAGGTaGAAGGCGGCTGTGGGTATACTGGCTCATGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAFCPLETARRR*KAAVGILAHDG Trigger: TCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAGGACAAAAAGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS TCA 72 bp | CGTCAGGATATGCTTAAGGACTCGGCTGAATCTGTCTaGCGTCCCGGAAGAGCTAAAGATCTCCTCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQDMLKDSAESV*RPGRAKDLLSP Trigger: GGGGCTGAGGAGATCTTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGAGTCCTTAAGCATATCCTGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | TCCAGGAAAGGTCCGAACAGGATGCAGACATCTGGCTaGTCACGGTTGATGATGGCGATCAGATCAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRKGPNRMQTSG*SRLMMAIRSSR Trigger: CCTGCTTGATCTGATCGCCATCATCAACCGTGACCAGCCAGATGTCTGCATCCTGTTCGGACCTTTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GTCCCGGAAGAGCTAAAGATCTCCTCAGCCCCGATGTaGAACAGCAGGTCCGTGGATGTCAAACCAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: VPEELKISSAPM*NSRSVDVKPNI Trigger: GATGTTTGGTTTGACATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGAGATCTTTAGCTCTTCCGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | AGCTCCCTCCTCTTCAGTAGGCTGATAGAACGGAAGTaGCACGCCCTCATAGAGTTTGGTGGCAGTAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLLFSRLIERK*HALIEFGGSKS Trigger: AGACTTACTGCCACCAAACTCTATGAGGGCGTGCCACTTCCGTTCTATCAGCCTACTGAAGAGGAGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 ENSMUST00000236013.2 |
||
| CDS CCA 72 bp | AGCATCCAGGAAAGGTCCGAACAGGATGCAGACATCTaGCTGGTCACGGTTGATGATGGCGATCAGATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIQERSEQDADI*LVTVDDGDQIK Trigger: CTTGATCTGATCGCCATCATCAACCGTGACCAGCCAGATGTCTGCATCCTGTTCGGACCTTTCCTGGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GGTCCGTGGATGTCAAACCAAACATCACTCCATTTATaGAGAGGCTGCAGGGCTCTGACACAAACTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: GPWMSNQTSLHL*RGCRALTQTAL Trigger: GAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGTTTGGTTTGACATCCACGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | AGATCTCCTCAGCCCCGATGTGGAACAGCAGGTCCGTaGATGTCAAACCAAACATCACTCCATTTATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSPQPRCGTAGP*MSNQTSLHLWR Trigger: TCTCCATAAATGGAGTGATGTTTGGTTTGACATCCACGGACCTGCTGTTCCACATCGGGGCTGAGGAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GAAGTTCTCGTAGTCTATGGCCATGTCCTCGTGGGGTaGATAAAGTGGGTAGTAACTTCTCTGCGTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EVLVVYGHVLVG*IKWVVTSLRQD Trigger: ATCCTGACGCAGAGAAGTTACTACCCACTTTATCCACCCCACGAGGACATGGCCATAGACTACGAGAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CAA 72 bp | ATAATTACAACCTGTCCAGGGAAGAGGGAATACTCTTaGAGTTCCGATAGGTCCACTGGGATCTGCGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IITTCPGKREYS*SSDRSTGICAP Trigger: TGGCGCGCAGATCCCAGTGGACCTATCGGAACTCAAAGAGTATTCCCTCTTCCCTGGACAGGTTGTAATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | GTAGTCTATGGCCATGTCCTCGTGGGGTGGATAAAGTaGGTAGTAACTTCTCTGCGTCAGGATATGCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VVYGHVLVGWIK*VVTSLRQDMLK Trigger: CTTAAGCATATCCTGACGCAGAGAAGTTACTACCCACTTTATCCACCCCACGAGGACATGGCCATAGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CCA 72 bp | AACTGTTCTCAGGCATTGCTTGAAAACGTCTTCGAATaGGCTTGTCAACTTACAGTTCTCCACCTGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: NCSQALLENVFE*ACQLTVLHLFM Trigger: CATGAACAGGTGGAGAACTGTAAGTTGACAAGCCCATTCGAAGACGTTTTCAAGCAATGCCTGAGAACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235535.2 |
||
| CDS CAA 72 bp | TCTTTGGAGGCACTGTGCCAGGCTTTGGAGAGTTTTTaGTTCAGAACCTCGTATTCAAAAGAGTTCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLEALCQALESF*FRTSYSKEFRM Trigger: CATCCTGAACTCTTTTGAATACGAGGTTCTGAACAAAAAACTCTCCAAAGCCTGGCACAGTGCCTCCAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025752.15 ENSMUST00000165143.3 ENSMUST00000235224.2 |
||