Pregenerated sensors for POLA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006678Ensembl transcript IDs: ENSMUST00000006856.3
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATaGAGTCCTCAAAAGAAAAGCAAGATAGTGGTGCAGCAGTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: DTPTLVHIYININTV*SPQKKSKIVVQQLG Trigger: CCCTAACTGCTGCACCACTATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR CCA 90 bp | TCTAGCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATaGAACAGTGATCCTTACTACAACCTCACCATAAATTTTGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSKHWILSAVSHSSE*NSDPYYNLTINFVK Trigger: TTTCACAAAATTTATGGTGAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR CCA 90 bp | TCAAAGAGACACTATTCTGAAGAACTGATGAAATCTAGCAAGCACTaGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: SKRHYSEELMKSSKH*ILSAVSHSSEWNSD Trigger: ATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGCTAGATTTCATCAGTTCTTCAGAATAGTGTCTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCCTCAGCAGCTCAGATTaGGCAGCTGGCCTCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLLSSSD*AAGLLA Trigger: TGCAAGGAGGCCAGCTGCCCAATCTGAGCTGCTGAG...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCAGACTGGGTTTAACTaGCATGTGAAAAAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: ASTGSCQLCPILLNGTVIQTGFN*HVKKQN Trigger: ATTTTGCTTTTTCACATGTCAGTTAAACCCAGTCTG...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR CCA 72 bp | GCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTaGGCAGCTGGCCTCCTTGCATCCTTCCCGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: AVRAGGGLSSSD*AAGLLASFPAL Trigger: GAGAGCCGGGAAGGATGCAAGGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCCCTCAGCAGCTCAGATaGGGCAGCTGGCCTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: KQTCFLYLVSANFLNPSTPQQLR*GSWPPC Trigger: GCAAGGAGGCCAGCTGCCCAATCTGAGCTGCTGAGG...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR CCA 72 bp | CACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATaGAACAGTGATCCTTACTACAACCTCACCATAAAT | + |
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Preference number: 3 (lower is better) Translates to: HWILSAVSHSSE*NSDPYYNLTIN Trigger: ATTTATGGTGAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| 3UTR CCA 72 bp | CACTATTCTGAAGAACTGATGAAATCTAGCAAGCACTaGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGG | + |
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Preference number: 3 (lower is better) Translates to: HYSEELMKSSKH*ILSAVSHSSEW Trigger: CCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGCTAGATTTCATCAGTTCTTCAGAATAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCACAGAGGCTCATTCCTaGGGACAGGGGAAGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QQLGQAEASAAQIGQLASTEAHS*GQGKQV Trigger: AACCTGCTTCCCCTGTCCTCAGGAATGAGCCTCTGT...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCCGGCTCCCAAGTTTTaGCATGTTGGATCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLPAPKF*HVGSPQ Trigger: CTGAGGAGATCCAACATGCCAAAACTTGGGAGCCGG...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCTCCACAGGTGTCAAGTaGATCATCCTCAAGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLSTGVK*IILKVI Trigger: GATGACCTTGAGGATGATGCACTTGACACCTGTGGA...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCTGCAACGATACAAACTaGGTTCCATATCCAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QQLGQAEASAAQIGQLASCNDTN*VPYPVP Trigger: CGGGACTGGATATGGAACCCAGTTTGTATCGTTGCA...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCGGTGGTGGAGTTATTTaGGCTGTCTCAGTGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLGGGVI*AVSVFR Trigger: TCTAAACACTGAGACAGCTCAAATAACTCCACCACC...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCAGCTTTCTGCACCTCTaGAGTAACTCTTTGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLSFLHL*SNSLHC Trigger: ACAGTGCAAAGAGTTACTTCAGAGGTGCAGAAAGCT...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCCAAGGTTCTTTCTGTTaGAGCGATCTCAACCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QQLGQAEASAAQIGQLASQGSFC*SDLNLH Trigger: ATGAAGGTTGAGATCGCTGCAACAGAAAGAACCTTG...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCTACATTCACCAGGTCTaGTTTCAAAGCCATTACCTC | + |
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Preference number: 4 (lower is better) Translates to: QQLGQAEASAAQIGQLASYIHQV*FQSHYL Trigger: GAGGTAATGGCTTTGAAACCAGACCTGGTGAATGTA...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCTTGTTAATTTCAAACTaGCTCACTGGGACACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLLLISN*LTGTLP Trigger: TGGCAGTGTCCCAGTGAGCCAGTTTGAAATTAACAA...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCTAGCAGATCATCCTTaGACAAGTCTACTGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLLADHP*TSLLLY Trigger: ATAAAGCAGTAGACTTGTCCAAGGATGATCTGCTAG...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCTTTACACCAACTGATTaGCTGATTCAAGAGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QQLGQAEASAAQIGQLASFTPTD*LIQELW Trigger: CCACAACTCTTGAATCAGCCAATCAGTTGGTGTAAA...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCTCTGGACATTCTGGCTaGGCCAGCTCTCCAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVISGHSG*ASSPAS Trigger: ACTTGCTGGAGAGCTGGCTCAGCCAGAATGTCCAGA...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCGGAAGCAGGTTTTCCTaGAGGAATTGCCTTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIGSRFS*RNCLRG Trigger: ACCCCTAAGGCAATTCCTTCAGGAAAACCTGCTTCC...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCTCAGCCGACCTATCTTaGACCAGTAAGGAACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVISADLS*TSKEPC Trigger: GCAAGGTTCCTTACTGGTCCAAGATAGGTCGGCTGA...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCAAGCTGTGGCACTTCTaGCGAGTATCTAACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIKLWHF*RVSNFQ Trigger: CTGGAAGTTAGATACTCGGCAGAAGTGCCACAGCTT...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCGCCTCCAGCGTAAGTTaGTTTCTTACGCCCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIASSVS*FLTPFL Trigger: AAGAAAGGGCGTAAGAAAGCAACTTACGCTGGAGGC...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCCTTAGGGGTGTGCACTaGAAAAGGGTTGAGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLLRGVH*KRVEQS Trigger: GCTTTGCTCAACCCTTTTTCAGTGCACACCCCTAAG...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAACTGGCTCAGTCTCTTaGTCCCAAGTCTTAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRTGSVS*SQVLAV Trigger: GACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCATCAATTCCATCTATTaGCTCACAGATCCGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIINSIY*LTDPSH Trigger: GTGGCTCGGATCTGTGAGCCAATAGATGGAATTGAT...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCACCTTCCTGCCTCCTTaGGAATTTATCCACAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLTFLPP*EFIHSA Trigger: TGCACTGTGGATAAATTCTCAAGGAGGCAGGAAGGT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAATTCTGTGGAAGCTGTaGCACTTCTGCCGAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRILWKL*HFCRVS Trigger: AGATACTCGGCAGAAGTGCCACAGCTTCCACAGAAT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCAGACATCACCACAAGTaGAGGAGGACTGACATCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLRHHHK*RRTDIL Trigger: AAGGATGTCAGTCCTCCTCCACTTGTGGTGATGTCT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCGCAATAATCTCATGTTaGTGGTTCTGTACATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIAIISC*WFCTFC Trigger: GCAGAATGTACAGAACCATCAACATGAGATTATTGC...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCGTTTCATTAGCTGTTTaGCTTGTTTTCTCCGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIVSLAV*LVFSAL Trigger: TAGAGCGGAGAAAACAAGTCAAACAGCTAATGAAAC...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAGTTGCAGTGAGGTTTaGCCCATCCTGACAAATAAC | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRSCSEV*PILTNN Trigger: GTTATTTGTCAGGATGGGTCAAACCTCACTGCAACT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCATCAAAAATCTCTCTaGCATCTTCCACATAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIHQKSL*HLPHSL Trigger: TAGGCTATGTGGAAGATGGCAGAGAGATTTTTGATG...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCGGACAAGAACTGCTCTaGTATGTTCTTGACTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIGQELL*YVLDFS Trigger: AGAAAAGTCAAGAACATAGCAGAGCAGTTCTTGTCC...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR GCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGACTCCAGGACAAGAACTaGTCTGCTATGTTCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRLQDKN*SAMFLT Trigger: AGTCAAGAACATAGCAGAGCAGTTCTTGTCCTGGAG...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGATGCCCCTTTTACCAATaGGAGATTACTGGAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRCPFYQ*EITGIH Trigger: GTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCA...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCACACAACAGCTCACATaGGTTTTGACTGATTCAATC | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVITQQLT*VLTDSI Trigger: GATTGAATCAGTCAAAACCCATGTGAGCTGTTGTGT...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAAGTTTCCAGTGTCCTTaGCAAGATCACACCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LGVSLIKPQGKLKVTYILSFQCP*QDHTSL Trigger: GAGACTGGTGTGATCTTGCCAAGGACACTGGAAACT...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTATTTCTGCAATTGTTCTaGGGCATAGGCCCTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LGVSLIKPQGKLKVTYILFLQLF*GIGPLS Trigger: ACTCAGAGGGCCTATGCCCCAGAACAATTGCAGAAA...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCAGCTCACATGGGTTTTaGCTGATTCAATCCACACTT | + |
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Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLSSHGF*LIQSTL Trigger: AAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGAATCTGGCCAATaGCAAAGTTTCCAGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRKESGQ*QSFQCP Trigger: AGGACACTGGAAACTTTGTCATTGGCCAGATTCTTT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATATGGTGTCCCGGCTTTaGTCAGAAAGAATCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SILILPPWSTSTSTSTQYMVSRL*SERIWP Trigger: TGGCCAGATTCTTTCTGATCAAAGCCGGGACACCAT...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCACCTGGTTGGTTGTATaGATCTTCATAAGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLTWLVV*IFISIQ Trigger: CTGGATGCTTATGAAGATCCATACAACCAACCAGGT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCATCCTTCATTGTAACTaGAATTGCTGTTTCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ASTGSCQLCPILLNGTVIILHCN*NCCFFP Trigger: GGGAAAGAAACAGCAATTCCAGTTACAATGAAGGAT...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR TCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATATGGCGAAGAGCTTGCTaGGGTTCACTTCAGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIWRRAC*GSLQSS Trigger: GCTACTCTGAAGTGAACCTCAGCAAGCTCTTCGCCA...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAACCATGTCTTTCGTATaGATCAAAATCTCCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRTMSFV*IKISLP Trigger: AGGAAGGGAGATTTTGATGCATACGAAAGACATGGT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATTTGACGTCCTTTCTTTaGTTTCTTTTCTCGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SILILPPWSTSTSTSTQYLTSFL*FLFSPS Trigger: GCTCGGCGAGAAAAGAAATCAAAGAAAGGACGTCAA...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAACACAGAAATGTGTCTaGAAGGGAGGCTCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKITQKCV*KGGSGG Trigger: ACCTCCAGAGCCTCCCTTTCAGACACATTTCTGTGT...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCTCTATTAACCTCTTCTaGATGTTTTCCACAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLSINLF*MFSTMV Trigger: CACCATTGTGGAAAACATTCAGAAGAGGTTAATAGA...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAATTTTCAGTTCCACATaGAGGACAAAGGCATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRIFSST*RTKAFE Trigger: TTCAAATGCCTTTGTCCTTCATGTGGAACTGAAAAT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCACCAGTTTCGAATACTaGTCTTCATCAACTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLTSFEY*SSSTSS Trigger: TGAAGAAGTTGATGAAGAGCAGTATTCGAAACTGGT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCCATTGTAACTGGAATTaGTGTTTCTTTCCCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLHCNWN*CFFPCV Trigger: AACACAGGGAAAGAAACAGCAATTCCAGTTACAATG...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAAGCTCACACATGATCTaGAAAATGAATCTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVSLIKPQGKLKVTYILSSHMI*KMNLAS Trigger: AGATGCCAGATTCATTTTGCAGATCATGTGTGAGCT...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAACCATACATACTGTTTaGTGTGAGCTTCAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGVSLIKPQGKLKVTYILTIHTV*CELQSL Trigger: AAGGCTTTGAAGCTCACAGCAAACAGTATGTATGGT...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAGGGATCCTTTGTCAATaGCTTGTTAATTTCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRGILCQ*LVNFKL Trigger: CAGTTTGAAATTAACAAGGCATTGACAAAGGATCCC...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTATATCAATACAGGTGGTaGAGTTATTTGAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVSLIKPQGKLKVTYILYQYRW*SYLSCL Trigger: GAGACAGCTCAAATAACTCCACCACCTGTATTGATA...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCATCTTCTGGACATTCTaGCTGAGCCAGCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQTCFLYLVSANFLNPSTIFWTF*LSQLSS Trigger: GCTGGAGAGCTGGCTCAGCCAGAATGTCCAGAAGAT...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCCAAGTTTTGGCATGTTaGATCTCCTCAGCCGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLQVLAC*ISSADL Trigger: TAGGTCGGCTGAGGAGATCCAACATGCCAAAACTTG...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCCAACAAGGTCCTTTaGTCTTCCTATTCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SILILPPWSTSTSTSTQYANKVL*SSYSSR Trigger: TCTTGATGAATAGGAAGATCAAAGGACCTTGTTGGC...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCGCATTGTCTTCATGCTaGAAGACATCACCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLALSSC*KTSPQV Trigger: CACTTGTGGTGATGTCTTTCAGCATGAAGACAATGC...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGACTTGGACAAGTCTACTaGTTTATCTGTAGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRLGQVY*FICSFL Trigger: AAGAAAACTACAGATAAAGCAGTAGACTTGTCCAAG...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAGGCTCACTGGGACACTaGCATTTAGCACATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIGSLGH*HLAHFL Trigger: GAGAAAATGTGCTAAATGGCAGTGTCCCAGTGAGCC...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGATACAATCAACATTACTaGAACGATACAAACTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRYNQHY*NDTNWV Trigger: AACCCAGTTTGTATCGTTGCAGTAATGTTGATTGTA...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCATACTTCTTCCAGGTTaGTGCTATTGGTATTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLILLPG*CYWYLS Trigger: TGATAAATACCAATAGCACCAACCTGGAAGAAGTAT...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCGAATGTTTTCCACAATaGTGTCCCGGCTTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLECFPQ*CPGFDQ Trigger: CTGATCAAAGCCGGGACACCATTGTGGAAAACATTC...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCGCGACTGCAACAAGTTaGCTCTTCACATATCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLATATS*LFTYQP Trigger: TGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGC...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATCTCTCTAAAGCTTCTTaGCGTCCTTTCTTTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SILILPPWSTSTSTSTQYLSKAS*RPFFDF Trigger: GAAATCAAAGAAAGGACGTCAAGAAGCTTTAGAGAG...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCGCTCTGCTATGTTCTTaGCTTTTCTGTAGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLALLCS*LFCSPE Trigger: TTCAGGACTACAGAAAAGTCAAGAACATAGCAGAGC...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATACCTTTCTGTGTGCTTTaGCATCACTTCCTTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIPFCVL*HHFLFH Trigger: GTGGAAAAGGAAGTGATGGCAAAGCACACAGAAAGG...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATCACTCATTAATTCTTTaGAGCAGCACTTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SILILPPWSTSTSTSTQYHSLIL*SSTSSS Trigger: TGAACTGGAAGTGCTGCTGCAAAGAATTAATGAGTG...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAGTTTCCGAATCTCTCTaGGCAAAATGCCCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIVSESL*AKCPSL Trigger: TAGAGATGGGCATTTTGCCCAGAGAGATTCGGAAAC...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATATGTCGGATGTCATACTaGAGAACAAGGTCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKICRMSY*RTRSGF Trigger: AAATCCAGACCTTGTTCTTCAGTATGACATCCGACA...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATATCTCTCTGGGCAAAATaGCCATCTCTAAGTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKISLWAK*PSLSLD Trigger: ATCCAAACTTAGAGATGGGCATTTTGCCCAGAGAGA...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATACCAATGGGAGATTACTaGAATCCACTTGAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIPMGDY*NPLELP Trigger: AGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGG...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCTCCTCTGTAGCTTTCTaGACCTCTGAAGTAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQTCFLYLVSANFLNPSTSSVAF*TSEVTL Trigger: AAGAGTTACTTCAGAGGTGCAGAAAGCTACAGAGGA...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAAAACTACAAATATTATaGCCCACAAGAATGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKIKLQIL*PTRMSG Trigger: CCCTGACATTCTTGTGGGTCATAATATTTGTAGTTT...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAAGTGCAACATGTACATaGGGTAAGCTTTTTCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYININTVCSPQKKSKISATCT*GKLFLS Trigger: TGATAGAAAAAGCTTACCTCATGTACATGTTGCACT...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCTGGTATCAATACAGGTaGTGGAGTTATTTGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTCFLYLVSANFLNPSTWYQYR*WSYLSC Trigger: ACAGCTCAAATAACTCCACCACCTGTATTGATACCA...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCCAAATTTACACCAACTaGTTGGCTGATTCAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQTCFLYLVSANFLNPSTQIYTN*LADSRV Trigger: AACTCTTGAATCAGCCAATCAGTTGGTGTAAATTTG...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCAGCCTCCAGCGTAAGTaGCTTTCTTACGCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQLGQAEASAAQIGQLASSLQRK*LSYALS Trigger: AGAAAGGGCGTAAGAAAGCAACTTACGCTGGAGGCT...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCAAAATCTCCCTTCCTTaGTATGTCACCAAGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQLGQAEASAAQIGQLASKISLP*YVTKAA Trigger: GGCTGCCTTGGTGACATACAAAGGAAGGGAGATTTT...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCTCAAGGTTCTTTCTGTaGCAGCGATCTCAACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVRAGGGLSSSDWAAGLSRFFL*QRSQPS Trigger: TGAAGGTTGAGATCGCTGCAACAGAAAGAACCTTGA...GAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTTAGGGCAGGCGGAGGCCTCAGCAGCTCAGATTGGGCAGCTGGCCTCCAGCCAACAAGGTCCTTaGATCTTCCTATTCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QQLGQAEASAAQIGQLASSQQGP*IFLFIK Trigger: CTTGATGAATAGGAAGATCAAAGGACCTTGTTGGCT...GGAGGCCAGCTGCCCAATCTGAGCTGCTGAGGCCTCCGCCTGCCCTAACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 90 bp | TGTGGTTCCCCTCTCAGGATCTGCCTCATGTTCCACCCTTTCTACTaGCTCAGTCTCTTGGTCCCAAGTCTTAGCAGTCACAGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSPLRICLMFHPFY*LSLLVPSLSSHRLL Trigger: GAGAAGCCTGTGACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTAGAAAGGGTGGAACATGAGGCAGATCCTGAGAGGGGAACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS TCA 90 bp | ACAGCTTTCATGCAGACTGGACACAGAGGCCCATTTCGGGAGAAATaGAGGGGAAGACGTCGAAGGCGACTGCAACAAGTTGGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAFMQTGHRGPFREK*RGRRRRRLQQVGSS Trigger: TGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCATTTCTCCCGAAATGGGCCTCTGTGTCCAGTCTGCATGAAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS TCA 90 bp | AACTCCATTACCCCTAGCTCCTGCTCATCTTCTGGACATTCTGGCTaGGCCAGCTCTCCAGCAAGTTCAGCACGTTTAAGAGGAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSITPSSCSSSGHSG*ASSPASSARLRGMG Trigger: TCCCATTCCTCTTAAACGTGCTGAACTTGCTGGAGAGCTGGCTCAGCCAGAATGTCCAGAAGATGAGCAGGAGCTAGGGGTAATGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 90 bp | GGACTTGTCAGAATACTCTGGTCTAAGCACAGCTTTCATGCAGACTaGACACAGAGGCCCATTTCGGGAGAAATGAAGGGGAAGACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLVRILWSKHSFHAD*TQRPISGEMKGKTS Trigger: CGACGTCTTCCCCTTCATTTCTCCCGAAATGGGCCTCTGTGTCCAGTCTGCATGAAAGCTGTGCTTAGACCAGAGTATTCTGACAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS GCA 90 bp | GAGGCCCATTTCGGGAGAAATGAAGGGGAAGACGTCGAAGGCGACTaGAACAAGTTGGCTCTTCACATATCAACCAGCCATCATAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: EAHFGRNEGEDVEGD*NKLALHISTSHHST Trigger: AGTACTATGATGGCTGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCATTTCTCCCGAAATGGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 90 bp | TCAGGATCTGCCTCATGTTCCACCCTTTCTACTGGCTCAGTCTCTTaGTCCCAAGTCTTAGCAGTCACAGGCTTCTCATCTACCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSASCSTLSTGSVS*SQVLAVTGFSSTFS Trigger: AGAGAAGGTAGATGAGAAGCCTGTGACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTAGAAAGGGTGGAACATGAGGCAGATCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCACCTTCCTGCCTCCTaGAGAATTTATCCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASTGSCQLCPILLNGTVIHLPAS*RIYPQC Trigger: GCACTGTGGATAAATTCTCAAGGAGGCAGGAAGGTG...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 90 bp | CTGCAATTGTTCTGGGGCATAGGCCCTCTGAGTTGCAGTGAGGTTTaGCCCATCCTGACAAATAACATAGGACACCGTATCACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQLFWGIGPLSCSEV*PILTNNIGHRITSF Trigger: AAAGCTGGTGATACGGTGTCCTATGTTATTTGTCAGGATGGGTCAAACCTCACTGCAACTCAGAGGGCCTATGCCCCAGAACAATTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAATGGTGTCCCGGCTTaGATCAGAAAGAATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRNGVPA*IRKNLA Trigger: GGCCAGATTCTTTCTGATCAAAGCCGGGACACCATT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 90 bp | CTTGTTTTCTCCGCTCTACCAGTTTCCGAATCTCTCTGGGCAAAATaGCCATCTCTAAGTTTGGATCTGGCAACTCAGGGATCTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVFSALPVSESLWAK*PSLSLDLATQGSVL Trigger: AAGAACAGATCCCTGAGTTGCCAGATCCAAACTTAGAGATGGGCATTTTGCCCAGAGAGATTCGGAAACTGGTAGAGCGGAGAAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | GCAAGCACTGGATCCTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCATGTCCATGATCAATTaGTTGCTCAGCTGTACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASTGSCQLCPILLNGTVIMSMIN*LLSCTM Trigger: CATGGTACAGCTGAGCAACAAATTGATCATGGACAT...GATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAGGATCCAGTGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 90 bp | TCGGGAGAAATGAAGGGGAAGACGTCGAAGGCGACTGCAACAAGTTaGCTCTTCACATATCAACCAGCCATCATAGTACTTTTTAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGEMKGKTSKATATS*LFTYQPAIIVLFNA Trigger: TGCATTAAAAAGTACTATGATGGCTGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCATTTCTCCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATCCAAGTTTTGGCATGTaGGATCTCCTCAGCCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SILILPPWSTSTSTSTQYPSFGM*DLLSRP Trigger: AGGTCGGCTGAGGAGATCCAACATGCCAAAACTTGG...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCTGGGTGTACAAGGACTaGTCAGAATACTCTGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLWVYKD*SEYSGL Trigger: TAGACCAGAGTATTCTGACAAGTCCTTGTACACCCA...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS GCA 90 bp | CTTTCTGTGTGCTTTGCCATCACTTCCTTTTCCACAGGTGTCAAGTaGATCATCCTCAAGGTCATCATCAAAAATCTCTCTGCCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVCFAITSFSTGVK*IILKVIIKNLSAIF Trigger: GAAGATGGCAGAGAGATTTTTGATGATGACCTTGAGGATGATGCACTTGACACCTGTGGAAAAGGAAGTGATGGCAAAGCACACAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAATTACTGGAATCCACTaGAACTTCCTGAGGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRITGIH*NFLRYA Trigger: AGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAAT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS-3UTR CAA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATGTCAAGTTTCTGCAATaGTTCTGGGGCATAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SILILPPWSTSTSTSTQYVKFLQ*FWGIGP Trigger: AGGGCCTATGCCCCAGAACAATTGCAGAAACTTGAC...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 90 bp | TTACCAATGGGAGATTACTGGAATCCACTTGAACTTCCTGAGGTATaGTTTCATCATCCTGATCAATGTCCCAACAAGAGACATCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPMGDYWNPLELPEV*FHHPDQCPNKRHLA Trigger: TGCCAGATGTCTCTTGTTGGGACATTGATCAGGATGATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 90 bp | CACAAGTGGAGGAGGACTGACATCCTTAATTACATTCACCAGGTCTaGTTTCAAAGCCATTACCTCAAATTTACACCAACTGATTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKWRRTDILNYIHQV*FQSHYLKFTPTDWL Trigger: CAGCCAATCAGTTGGTGTAAATTTGAGGTAATGGCTTTGAAACCAGACCTGGTGAATGTAATTAAGGATGTCAGTCCTCCTCCACTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 90 bp | CTGTACATTCTGCATTGTCTTCATGCTGAAAGACATCACCACAAGTaGAGGAGGACTGACATCCTTAATTACATTCACCAGGTCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYILHCLHAERHHHK*RRTDILNYIHQVWF Trigger: AAACCAGACCTGGTGAATGTAATTAAGGATGTCAGTCCTCCTCCACTTGTGGTGATGTCTTTCAGCATGAAGACAATGCAGAATGTACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 90 bp | AGCCTCCAGCGTAAGTTGCTTTCTTACGCCCTTTCTTGTATTTATTaGTGTCCCCATCAATTTCCTCATCTTCATCTCCCAGTTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQRKLLSYALSCIY*CPHQFPHLHLPVFA Trigger: AGCAAAAACTGGGAGATGAAGATGAGGAAATTGATGGGGACACCAATAAATACAAGAAAGGGCGTAAGAAAGCAACTTACGCTGGAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CTGTCAGCTGTGTCCCATTCTTCTGAATGGAACAGTGATCCTTACTACAACCTCTCCTTTGTCAATGCCTaGTTAATTTCAAACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSAVSHSSEWNSDPYYNLSFVNA*LISNWL Trigger: GAGCCAGTTTGAAATTAACAAGGCATTGACAAAGGA...GAGGTTGTAGTAAGGATCACTGTTCCATTCAGAAGAATGGGACACAGCTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | AGTATTTTGATACTCCCACCCTGGTCCACATCTACATCAACATCAACACAGTATCATCAATTCCATCTATaGGCTCACAGATCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SILILPPWSTSTSTSTQYHQFHL*AHRSEP Trigger: TGGCTCGGATCTGTGAGCCAATAGATGGAATTGATG...ATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGGGAGTATCAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTATCCATGATCAATTTGTaGCTCAGCTGTACCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGVSLIKPQGKLKVTYILSMINL*LSCTMK Trigger: CTTCATGGTACAGCTGAGCAACAAATTGATCATGGA...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 90 bp | GTCCATGATCAATTTGTTGCTCAGCTGTACCATGAAGGTCAACGGTaGAACCTTACAATCAACATTACTGCAACGATACAAACTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHDQFVAQLYHEGQR*NLTINITATIQTGF Trigger: GAACCCAGTTTGTATCGTTGCAGTAATGTTGATTGTAAGGTTTCACCGTTGACCTTCATGGTACAGCTGAGCAACAAATTGATCATGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 90 bp | ATAAAATCTGCTGTACGAAAATCCCAGGCAACCATACATACTGTTTaGTGTGAGCTTCAAAGCCTTCTGTCGGATGTCATACTGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IKSAVRKSQATIHTV*CELQSLLSDVILKN Trigger: GTTCTTCAGTATGACATCCGACAGAAGGCTTTGAAGCTCACAGCAAACAGTATGTATGGTTGCCTGGGATTTTCGTACAGCAGATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 90 bp | GAAACACTTGTTCATCATCTGCCCCTTTTACCAATGGGAGATTACTaGAATCCACTTGAACTTCCTGAGGTATGCTTTCATCATCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETLVHHLPLLPMGDY*NPLELPEVCFHHPD Trigger: ATCAGGATGATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCAGATGATGAACAAGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAATAAAACTGAAACACTaGTTCATCATCTGCCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRIKLKH*FIICPF Trigger: AAAGGGGCAGATGATGAACAAGTGTTTCAGTTTTAT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAGATTCAATCCACACTTaGCCAAACAGAAAAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGVSLIKPQGKLKVTYILDSIHT*PNRKTT Trigger: TGTGGTTTTTCTGTTTGGCAAAGTGTGGATTGAATC...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAGCAATAATCTCATGTaGATGGTTCTGTACATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPWSTSTSTSTQYAVLKRSNNLM*MVLYIL Trigger: CAGAATGTACAGAACCATCAACATGAGATTATTGCT...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCTCCGGCTCCCAAGTTTaGGCATGTTGGATCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KQTCFLYLVSANFLNPSTSGSQV*ACWISS Trigger: TGAGGAGATCCAACATGCCAAAACTTGGGAGCCGGA...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAGTGTCGATGGCTAAATaGTCAAGTTTCTGCAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGVSLIKPQGKLKVTYILVSMAK*SSFCNC Trigger: ACAATTGCAGAAACTTGACAATTTAGCCATCGACAC...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CCACCCTGGTCCACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAGAAGGACAAAGGCATTaGAATTTTTCACAATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPWSTSTSTSTQYAVLKREGQRH*NFSQSL Trigger: CAAGGATTGTGAAAAATTCAAATGCCTTTGTCCTTC...TCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTGGACCAGGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATAGGCGACTGCAACAAGTaGGCTCTTCACATATCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HIYININTVCSPQKKSKIGDCNK*ALHIST Trigger: GGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCC...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCTACTGGCTCAGTCTCTaGGTCCCAAGTCTTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KQTCFLYLVSANFLNPSTYWLSL*VPSLSS Trigger: ACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTA...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTAGGGGTGTCTCTGATAAAGCCCCAGGGTAAACTGAAGGTCACTTACATCTTAGAAGGATATAAACTGTaGAAATCCAGGAGCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LGVSLIKPQGKLKVTYILEGYKL*KSRSKM Trigger: CATTTTGCTCCTGGATTTCAACAGTTTATATCCTTC...TAAGATGTAAGTGACCTTCAGTTTACCCTGGGGCTTTATCAGAGACACCCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 90 bp | TTCATAAGCATCCAGCCAATAAAACTGAAACACTTGTTCATCATCTaGCCCTTTTACCAATGGGAGATTACTGGAATCCACTTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FISIQPIKLKHLFII*PFYQWEITGIHLNF Trigger: GAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCAGATGATGAACAAGTGTTTCAGTTTTATTGGCTGGATGCTTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 90 bp | GTGATCTGCAATGCTAATGGAAGAACATTTAGCTCACACATGATCTaGAAAATGAATCTGGCATCTTTCCAGATATGTTCCAACAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VICNANGRTFSSHMI*KMNLASFQICSNRY Trigger: GTACCTGTTGGAACATATCTGGAAAGATGCCAGATTCATTTTGCAGATCATGTGTGAGCTAAATGTTCTTCCATTAGCATTGCAGATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCAAAAACCACACCTGGTaGGTTGTATGGATCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLKNHTW*VVWIFI Trigger: TATGAAGATCCATACAACCAACCAGGTGTGGTTTTT...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | CACATCTACATCAACATCAACACAGTATGCAGTCCTCAAAAGAAAAGCAAGATATTCTTACGCCCTTTCTaGTATTTATTGGTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIYININTVCSPQKKSKIFLRPF*YLLVSP Trigger: TGGGGACACCAATAAATACAAGAAAGGGCGTAAGAA...TATCTTGCTTTTCTTTTGAGGACTGCATACTGTGTTGATGTTGATGTAGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | TTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCACCACCTCGCAATGAACATTGCCTaGATATTGTTTGGTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFVFSKCKLSKSLHHHLAMNIA*ILFGFV Trigger: GACAAAACCAAACAATATCAAGGCAATGTTCATTGC...GAGGTGGTGGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAACTTGCTTTTTGTATTTAGTAAGTGCAAACTTTCTAAATCCCTCCACCAATTCCCATCTGATGTaGGTTCAACAACTAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQTCFLYLVSANFLNPSTNSHLM*VQQLEQ Trigger: CTGCTCTAGTTGTTGAACCAACATCAGATGGGAATT...GGTGGAGGGATTTAGAAAGTTTGCACTTACTAAATACAAAAAGCAAGTTTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | GGGAAGCTGCAAAACTCCCTGAATCTGACACAGCGCTaGCCTCCAGTTTACAGTCCTCTTCGTGCATGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GKLQNSLNLTQR*PPVYSPLRAWA Trigger: CGCCCATGCACGAAGAGGACTGTAAACTGGAGGCAAGCGCTGTGTCAGATTCAGGGAGTTTTGCAGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | ACCCCTAGCTCCTGCTCATCTTCTGGACATTCTGGCTaGGCCAGCTCTCCAGCAAGTTCAGCACGTTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPSSCSSSGHSG*ASSPASSARLR Trigger: TCTTAAACGTGCTGAACTTGCTGGAGAGCTGGCTCAGCCAGAATGTCCAGAAGATGAGCAGGAGCTAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | CCTCTCAGGATCTGCCTCATGTTCCACCCTTTCTACTaGCTCAGTCTCTTGGTCCCAAGTCTTAGCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLRICLMFHPFY*LSLLVPSLSSH Trigger: GTGACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTAGAAAGGGTGGAACATGAGGCAGATCCTGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | CACCAAATCCACTCCGGCTCCCAAGTTTTGGCATGTTaGATCTCCTCAGCCGACCTATCTTGGACCAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HQIHSGSQVLAC*ISSADLSWTSK Trigger: CTTACTGGTCCAAGATAGGTCGGCTGAGGAGATCCAACATGCCAAAACTTGGGAGCCGGAGTGGATTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CAA 90 bp | CTCAGGATCTGCCTCATGTTCCACCCTTTCTACTGGCTCAGTCTCTaGGTCCCAAGTCTTAGCAGTCACAGGCTTCTCATCTACCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRICLMFHPFYWLSL*VPSLSSHRLLIYLL Trigger: GAGAAGGTAGATGAGAAGCCTGTGACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTAGAAAGGGTGGAACATGAGGCAGATCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | TGCCTCATGTTCCACCCTTTCTACTGGCTCAGTCTCTaGGTCCCAAGTCTTAGCAGTCACAGGCTTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CLMFHPFYWLSL*VPSLSSHRLLI Trigger: GATGAGAAGCCTGTGACTGCTAAGACTTGGGACCAAGAGACTGAGCCAGTAGAAAGGGTGGAACATGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS TCA 72 bp | TTCTGGGGCATAGGCCCTCTGAGTTGCAGTGAGGTTTaGCCCATCCTGACAAATAACATAGGACACCGTATC | + |
|
Preference number: 6 (lower is better) Translates to: FWGIGPLSCSEV*PILTNNIGHRI Trigger: GATACGGTGTCCTATGTTATTTGTCAGGATGGGTCAAACCTCACTGCAACTCAGAGGGCCTATGCCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | TTCGGGAGAAATGAAGGGGAAGACGTCGAAGGCGACTaGAACAAGTTGGCTCTTCACATATCAACCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FGRNEGEDVEGD*NKLALHISTSH Trigger: ATGGCTGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCATTTCTCCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 72 bp | GGTGGATCTGCTGGGCCAAGTAGTATTGGGTGTCGATaGCTAAATTGTCAAGTTTCTGCAATTGTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSAGPSSIGCR*LNCQVSAIVLG Trigger: CCCCAGAACAATTGCAGAAACTTGACAATTTAGCCATCGACACCCAATACTACTTGGCCCAGCAGATCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CAA 90 bp | CTACCAGTTTCCGAATCTCTCTGGGCAAAATGCCCATCTCTAAGTTaGGATCTGGCAACTCAGGGATCTGTTCTTGTTCCTCATCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPVSESLWAKCPSLS*DLATQGSVLVPHPL Trigger: CAGAGGATGAGGAACAAGAACAGATCCCTGAGTTGCCAGATCCAAACTTAGAGATGGGCATTTTGCCCAGAGAGATTCGGAAACTGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 72 bp | CTTGTTTTCTCCGCTCTACCAGTTTCCGAATCTCTCTaGGCAAAATGCCCATCTCTAAGTTTGGATCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVFSALPVSESL*AKCPSLSLDLA Trigger: TGCCAGATCCAAACTTAGAGATGGGCATTTTGCCCAGAGAGATTCGGAAACTGGTAGAGCGGAGAAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
||
| CDS CCA 72 bp | ATGAAGGGGAAGACGTCGAAGGCGACTGCAACAAGTTaGCTCTTCACATATCAACCAGCCATCATAGTACTT | + |
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Preference number: 6 (lower is better) Translates to: MKGKTSKATATS*LFTYQPAIIVL Trigger: AAGTACTATGATGGCTGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | TCCGAATCTCTCTGGGCAAAATGCCCATCTCTAAGTTaGGATCTGGCAACTCAGGGATCTGTTCTTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SESLWAKCPSLS*DLATQGSVLVP Trigger: AGGAACAAGAACAGATCCCTGAGTTGCCAGATCCAAACTTAGAGATGGGCATTTTGCCCAGAGAGATTCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | AATGAAGGGGAAGACGTCGAAGGCGACTGCAACAAGTaGGCTCTTCACATATCAACCAGCCATCATAGTACT | + |
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Preference number: 6 (lower is better) Translates to: NEGEDVEGDCNK*ALHISTSHHST Trigger: AGTACTATGATGGCTGGTTGATATGTGAAGAGCCAACTTGTTGCAGTCGCCTTCGACGTCTTCCCCTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 90 bp | GTCACTGAAGGTTTCTTTACATCCTTCCTGTCCTTTCTGTGTGCTTaGCCATCACTTCCTTTTCCACAGGTGTCAAGTGCATCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VTEGFFTSFLSFLCA*PSLPFPQVSSASSS Trigger: TGAGGATGATGCACTTGACACCTGTGGAAAAGGAAGTGATGGCAAAGCACACAGAAAGGACAGGAAGGATGTAAAGAAACCTTCAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | GCTGTACGAAAATCCCAGGCAACCATACATACTGTTTaGTGTGAGCTTCAAAGCCTTCTGTCGGATGTCATA | + |
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Preference number: 6 (lower is better) Translates to: AVRKSQATIHTV*CELQSLLSDVI Trigger: TATGACATCCGACAGAAGGCTTTGAAGCTCACAGCAAACAGTATGTATGGTTGCCTGGGATTTTCGTACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | CAGTCACAGGCTTCTCATCTACCTTCTCTGTGTCCATaGACTCATCAAAGTCACCGTCTTCAAACTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: QSQASHLPSLCP*THQSHRLQTPL Trigger: TAATGGAGTTTGAAGACGGTGACTTTGATGAGTCCATGGACACAGAGAAGGTAGATGAGAAGCCTGTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | CAGTCCTTTGGTTTAGACACAACACAGAAATGTGTCTaGAAGGGAGGCTCTGGAGGTGCTTTATCTAATGCA | + |
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Preference number: 6 (lower is better) Translates to: QSFGLDTTQKCV*KGGSGGALSNA Trigger: TGCATTAGATAAAGCACCTCCAGAGCCTCCCTTTCAGACACATTTCTGTGTTGTGTCTAAACCAAAGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | AACTTTGGGGTCCAAAACCAAGCCTCCAGCGTAAGTTaGTTTCTTACGCCCTTTCTTGTATTTATTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NFGVQNQASSVS*FLTPFLVFIGV Trigger: GACACCAATAAATACAAGAAAGGGCGTAAGAAAGCAACTTACGCTGGAGGCTTGGTTTTGGACCCCAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | CTGAAACACTTGTTCATCATCTGCCCCTTTTACCAATaGGAGATTACTGGAATCCACTTGAACTTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LKHLFIICPFYQ*EITGIHLNFLR Trigger: CCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCAGATGATGAACAAGTGTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | CTGCATTGTCTTCATGCTGAAAGACATCACCACAAGTaGAGGAGGACTGACATCCTTAATTACATTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LHCLHAERHHHK*RRTDILNYIHQ Trigger: CTGGTGAATGTAATTAAGGATGTCAGTCCTCCTCCACTTGTGGTGATGTCTTTCAGCATGAAGACAATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | TGCCCCTTTTACCAATGGGAGATTACTGGAATCCACTaGAACTTCCTGAGGTATGCTTTCATCATCCTGATC | + |
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Preference number: 6 (lower is better) Translates to: CPFYQWEITGIH*NFLRYAFIILI Trigger: GATCAGGATGATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | CAACTTTGGGGTCCAAAACCAAGCCTCCAGCGTAAGTaGCTTTCTTACGCCCTTTCTTGTATTTATTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QLWGPKPSLQRK*LSYALSCIYWC Trigger: ACACCAATAAATACAAGAAAGGGCGTAAGAAAGCAACTTACGCTGGAGGCTTGGTTTTGGACCCCAAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 90 bp | TTCATCATCTGCCCCTTTTACCAATGGGAGATTACTGGAATCCACTaGAACTTCCTGAGGTATGCTTTCATCATCCTGATCAATGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FIICPFYQWEITGIH*NFLRYAFIILINVP Trigger: TGGGACATTGATCAGGATGATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCAGATGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | CCAGCTTTAGCCTTTTTCAGTCTCTCTAAAGCTTCTTaGCGTCCTTTCTTTGATTTCTTTTCTCGCCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PALAFFSLSKAS*RPFFDFFSRRA Trigger: AGCTCGGCGAGAAAAGAAATCAAAGAAAGGACGTCAAGAAGCTTTAGAGAGACTGAAAAAGGCTAAAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | GCTGTGAGCTTCAAAGCCTTCTGTCGGATGTCATACTaGAGAACAAGGTCTGGATTTAAATCTTGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AVSFKAFCRMSY*RTRSGFKSCCF Trigger: GAAACAGCAAGATTTAAATCCAGACCTTGTTCTTCAGTATGACATCCGACAGAAGGCTTTGAAGCTCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | TGCTTTGCCATCACTTCCTTTTCCACAGGTGTCAAGTaGATCATCCTCAAGGTCATCATCAAAAATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CFAITSFSTGVK*IILKVIIKNLS Trigger: AGAGAGATTTTTGATGATGACCTTGAGGATGATGCACTTGACACCTGTGGAAAAGGAAGTGATGGCAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | GGAGATTACTGGAATCCACTTGAACTTCCTGAGGTATaGTTTCATCATCCTGATCAATGTCCCAACAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GDYWNPLELPEV*FHHPDQCPNKR Trigger: TCTCTTGTTGGGACATTGATCAGGATGATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | GTTCATCATCTGCCCCTTTTACCAATGGGAGATTACTaGAATCCACTTGAACTTCCTGAGGTATGCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VHHLPLLPMGDY*NPLELPEVCFH Trigger: ATGAAAGCATACCTCAGGAAGTTCAAGTGGATTCCAGTAATCTCCCATTGGTAAAAGGGGCAGATGATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | TGGGGATCCTTTGTCAATGCCTTGTTAATTTCAAACTaGCTCACTGGGACACTGCCATTTAGCACATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WGSFVNALLISN*LTGTLPFSTFS Trigger: AGAAAATGTGCTAAATGGCAGTGTCCCAGTGAGCCAGTTTGAAATTAACAAGGCATTGACAAAGGATCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | CAGCTCACATGGGTTTTGACTGATTCAATCCACACTTaGCCAAACAGAAAAACCACACCTGGTTGGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: QLTWVLTDSIHT*PNRKTTPGWLY Trigger: ATACAACCAACCAGGTGTGGTTTTTCTGTTTGGCAAAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | TTTTTAATGCACCGTCTAATGTCCATGATCAATTTGTaGCTCAGCTGTACCATGAAGGTCAACGGTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: FLMHRLMSMINL*LSCTMKVNGET Trigger: GGTTTCACCGTTGACCTTCATGGTACAGCTGAGCAACAAATTGATCATGGACATTAGACGGTGCATTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 90 bp | ATAACACAACAGCTCACATGGGTTTTGACTGATTCAATCCACACTTaGCCAAACAGAAAAACCACACCTGGTTGGTTGTATGGATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ITQQLTWVLTDSIHT*PNRKTTPGWLYGSS Trigger: TGAAGATCCATACAACCAACCAGGTGTGGTTTTTCTGTTTGGCAAAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCTGTTGTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 90 bp | GTTCGCTCAATATTTTTCACCATAACACAACAGCTCACATGGGTTTaGACTGATTCAATCCACACTTTGCCAAACAGAAAAACCACACCT | + |
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Preference number: 6 (lower is better) Translates to: VRSIFFTITQQLTWV*TDSIHTLPNRKTTP Trigger: AGGTGTGGTTTTTCTGTTTGGCAAAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCTGTTGTGTTATGGTGAAAAATATTGAGCGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | TTTCACCATAACACAACAGCTCACATGGGTTTTGACTaGTTCAATCCACACTTTGCCAAACAGAAAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: FHHNTTAHMGFD*FNPHFAKQKNH Trigger: GTGGTTTTTCTGTTTGGCAAAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCTGTTGTGTTATGGTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | AGGAGGACTGACATCCTTAATTACATTCACCAGGTCTaGTTTCAAAGCCATTACCTCAAATTTACACCAACT | + |
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Preference number: 6 (lower is better) Translates to: RRTDILNYIHQV*FQSHYLKFTPT Trigger: AGTTGGTGTAAATTTGAGGTAATGGCTTTGAAACCAGACCTGGTGAATGTAATTAAGGATGTCAGTCCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | TACTTTTTAATGCACCGTCTAATGTCCATGATCAATTaGTTGCTCAGCTGTACCATGAAGGTCAACGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: YFLMHRLMSMIN*LLSCTMKVNGE Trigger: TTCACCGTTGACCTTCATGGTACAGCTGAGCAACAAATTGATCATGGACATTAGACGGTGCATTAAAAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS TCA 72 bp | AATACTGCTCTTCATCAACTTCTTCATAAACACTTGTaGGGTCCTCAACTTCGTATTTATACTTCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: NTALHQLLHKHL*GPQLRIYTSPQ Trigger: CTGGGGAGAAGTATAAATACGAAGTTGAGGACCTCACAAGTGTTTATGAAGAAGTTGATGAAGAGCAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | ACTTCAAGATTCATCTTCTGTACCATGTCTTTCGTATaGATCAAAATCTCCCTTCCTTTGTATGTCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSRFIFCTMSFV*IKISLPLYVTK Trigger: CTTGGTGACATACAAAGGAAGGGAGATTTTGATGCATACGAAAGACATGGTACAGAAGATGAATCTTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CCA 72 bp | TTTGCCAAACAGAAAAACCACACCTGGTTGGTTGTATaGATCTTCATAAGCATCCAGCCAATAAAACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FAKQKNHTWLVV*IFISIQPIKLK Trigger: TTTCAGTTTTATTGGCTGGATGCTTATGAAGATCCATACAACCAACCAGGTGTGGTTTTTCTGTTTGGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS GCA 72 bp | AATGCTAATGGAAGAACATTTAGCTCACACATGATCTaGAAAATGAATCTGGCATCTTTCCAGATATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: NANGRTFSSHMI*KMNLASFQICS Trigger: GGAACATATCTGGAAAGATGCCAGATTCATTTTGCAGATCATGTGTGAGCTAAATGTTCTTCCATTAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 90 bp | AAATATTATGACCCACAAGAATGTCAGGGTCAATTTTGTGAACTTTaGCAAGGAAAAATCCTATCAAGGTTCTTTCTGTTGCAGCGATCT | + |
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Preference number: 6 (lower is better) Translates to: KYYDPQECQGQFCEL*QGKILSRFFLLQRS Trigger: AGATCGCTGCAACAGAAAGAACCTTGATAGGATTTTTCCTTGCAAAAGTTCACAAAATTGACCCTGACATTCTTGTGGGTCATAATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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| CDS CAA 72 bp | ATATTTTTCACCATAACACAACAGCTCACATGGGTTTaGACTGATTCAATCCACACTTTGCCAAACAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: IFFTITQQLTWV*TDSIHTLPNRK Trigger: TTTTCTGTTTGGCAAAGTGTGGATTGAATCAGTCAAAACCCATGTGAGCTGTTGTGTTATGGTGAAAAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006856.3 |
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