Pregenerated sensors for POGLUT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034487Ensembl transcript IDs: ENSMUST00000037853.5, ENSMUST00000214164.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGCAAGCCAGTGCACCTGAGCGTGCCACCCACGGATTCCCAGTaGTTTATGAGCCTTTTATCCACTAGGGTGCACAAACAAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: RSKPVHLSVPPTDSQ*FMSLLSTRVHKQAT Trigger: AGTTGCTTGTTTGTGCACCCTAGTGGATAAAAGGCTCATAAATCACTGGGAATCCGTGGGTGGCACGCTCAGGTGCACTGGCTTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCTCCAACTGGGTAAGCTaGGCTGGCCTGGAAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGSNWVS*AGLEVT Trigger: GGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGA...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCAGTAGCTATGCGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAGTTCTGCTTCCATTGTaGCAGGATTGCGGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LVSSYASNVSSYASNALTVLLPL*QDCGCE Trigger: CTCACACCCGCAATCCTGGCACAATGGAAGCAGAAC...TGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCGCATAGCTACTGACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | CTCGTCAGTAGCTATGCGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACACCTCCAGTCCCTCTCTaGGGGTTTCTCCTTATTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVSSYASNVSSYASNALTPPVPL*GFLLIL Trigger: AAGAATAAGGAGAAACCCCCAGAGAGGGACTGGAGG...TGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCGCATAGCTACTGACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCGAGGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGTTTAATCCCAGCACTTaGGAGGCAGAGACAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KRGRQSFFSCPYGIFVMLFNPST*EAETGR Trigger: TCTGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAA...CAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCCTCGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCCAGTGTGACTATATGGACAATTaGTTAAGTTGGAAGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: MSVAMQAMRSQPMGDGQCDYMDN*LSWKGR Trigger: CCTTCCCTTCCAACTTAACCAATTGTCCATATAGTC...ACACTGGCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGATATTTCTGGGTAAGCTGGGCTaGCCTGGAAGTCACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GRQSFFSCPYGIFVMLIFLGKLG*PGSHHK Trigger: TTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAG...AAATATCAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCGAGGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGATTCCCAGTGATTTATaGGCCTTTTATCCACTAGGG | + |
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Preference number: 2 (lower is better) Translates to: KRGRQSFFSCPYGIFVMLIPSDL*AFYPLG Trigger: CCCTAGTGGATAAAAGGCTCATAAATCACTGGGAAT...CAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCCTCGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTCTCTGGGGGTTTCTCCTTATTCTTAACTCATGGGCCCTGAAGCCAGATCAAGTCAATAGAAACTaGCTAGTTTGTTTCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: VPLWGFLLILNSWALKPDQVNRN*LVCFNF Trigger: GAAGTTGAAACAAACTAGGCAGTTTCTATTGACTTG...ATCTGGCTTCAGGGCCCATGAGTTAAGAATAAGGAGAAACCCCCAGAGAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGACAGTCGAGCCTCCCCAAACACTTTGCCCTTCATAATTGAATATAAAATCTCAGGTAGGCTTTaGACTAATGAAATCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GGDSRASPNTLPFIIEYKISGRL*TNEILL Trigger: CAAGAGGATTTCATTAGTGCAAAGCCTACCTGAGAT...TTTATATTCAATTATGAAGGGCAAAGTGTTTGGGGAGGCTCGACTGTCTCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTACTTCTCATGTCCATATaGGATATTTGTCATGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: KLEGKELELNKPAGSPKVLLMSI*DICHAD Trigger: ATCAGCATGACAAATATCCCATATGGACATGAGAAG...TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR TCA 72 bp | CCAGTGCACCTGAGCGTGCCACCCACGGATTCCCAGTaGTTTATGAGCCTTTTATCCACTAGGGTGCACAAA | + |
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Preference number: 3 (lower is better) Translates to: PVHLSVPPTDSQ*FMSLLSTRVHK Trigger: TTTGTGCACCCTAGTGGATAAAAGGCTCATAAATCACTGGGAATCCGTGGGTGGCACGCTCAGGTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CAA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCACTAATGAAATCCTCTaGTTCTGCTTCCATTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGTNEIL*FCFHCA Trigger: GGCACAATGGAAGCAGAACAAGAGGATTTCATTAGT...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR TCA 72 bp | AGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTaGCGGCCAGTGTTTCAAGCCATAAACATTGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: SSYASNALTTDG*RPVFQAINIVD Trigger: GTCAACAATGTTTATGGCTTGAAACACTGGCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR GCA 72 bp | TCAGGTAGGCTTTGCACTAATGAAATCCTCTTGTTCTaGTTCCATTGTGCCAGGATTGCGGGTGTGAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SGRLCTNEILLF*FHCARIAGVSL Trigger: TAGGCTCACACCCGCAATCCTGGCACAATGGAAGCAGAACAAGAGGATTTCATTAGTGCAAAGCCTACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGAGACAGTCGAGCCTCCCCAAACACTTTGCCCTTCATAATTGAATATAAACTTGTTCTGCTTCCATaGTGCCAGGATTGCGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GGDSRASPNTLPFIIEYKLVLLP*CQDCGC Trigger: ACACCCGCAATCCTGGCACAATGGAAGCAGAACAAG...TTTATATTCAATTATGAAGGGCAAAGTGTTTGGGGAGGCTCGACTGTCTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR GCA 72 bp | CTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCTTTaGACTAATGAAATCCTCTTGTTCTGCTTCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: LAWKSPQISGRL*TNEILLFCFHC Trigger: ACAATGGAAGCAGAACAAGAGGATTTCATTAGTGCAAAGCCTACCTGAGATTTGTGGTGACTTCCAGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR CCA 72 bp | AAGTGGCTAATGGACTATATGGACAATTGGTTAAGTTaGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KWLMDYMDNWLS*KGRNWSLINQL Trigger: CAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAGTCCATTAGCCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR TCA 72 bp | TCTGGGGGTTTCTCCTTATTCTTAACTCATGGGCCCTaGAGCCAGATATATTTTGATAAATACTTCAGTATT | + |
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Preference number: 3 (lower is better) Translates to: SGGFSLFLTHGP*SQIYFDKYFSI Trigger: AATACTGAAGTATTTATCAAAATATATCTGGCTTCAGGGCCCATGAGTTAAGAATAAGGAGAAACCCCCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCGGCTGTCGCCCAGCATaGGGTACGGATACCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGGCRPA*GTDTCR Trigger: CCTACAGGTATCCGTACCTCATGCTGGGCGACAGCC...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCATGGTGACTCCTGCTTaGGGACCAGGCTGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGMVTPA*GPGCRP Trigger: TGGGCGACAGCCTGGTCCTCAAGCAGGAGTCACCAT...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCGGCCTGGGGTGTCATTaGCTTTTCGATGCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGGLGCH*LFDAPR Trigger: CCTTGGAGCATCGAAAAGTCAATGACACCCCAGGCC...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCGCTGGAGCAGGTCCCTaGCAGTTAACTGCCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGAGAGP*QLTALL Trigger: AAGAAGGGCAGTTAACTGCCAGGGACCTGCTCCAGC...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | ATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCCAGTGTGGTGGCACTGGCAGATaGATGTGCCATCATCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: MSVAMQAMRSQPMGDGQCGGTGR*MCHHPA Trigger: AGCCGGATGATGGCACATCCATCTGCCAGTGCCACC...ACACTGGCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | GATTGCGGGTGTGAGCCTAACCCACCAGGCCTGGTTTCTCTGGTCCTTCACAGCAGAGGAGATCATTTGTaGCACCCCTCATTGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: DCGCEPNPPGLVSLVLHSRGDHL*HPSLLR Trigger: TCGAAGCAATGAGGGGTGTCACAAATGATCTCCTCT...GCTGTGAAGGACCAGAGAAACCAGGCCTGGTGGGTTAGGCTCACACCCGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR GCA 90 bp | GATTGCGGGTGTGAGCCTAACCCACCAGGCCTGGTTTCTCTGGTCCTTCACAGCTCCCTGGCAGTTAACTaGCCTTCTTTCGCAATCTTC | + |
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Preference number: 4 (lower is better) Translates to: DCGCEPNPPGLVSLVLHSSLAVN*PSFAIF Trigger: GAAGATTGCGAAAGAAGGGCAGTTAACTGCCAGGGA...GCTGTGAAGGACCAGAGAAACCAGGCCTGGTGGGTTAGGCTCACACCCGCAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | ATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCCAGTGTTTCCATCACGAATCATaGGCTTGCTGGCCTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: MSVAMQAMRSQPMGDGQCFHHES*ACWPGA Trigger: AGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAA...ACACTGGCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCGAAGGATCTCTATCTTaGGCCCTTTATGGGCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGEGSLS*ALYGPS Trigger: AGACGGCCCATAAAGGGCTCAAGATAGAGATCCTTC...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR GCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCACCTCCTTCAGCATCTaGTGGAGATTAATGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGTSFSI*WRLMLG Trigger: CCCCAGCATTAATCTCCAGCAGATGCTGAAGGAGGT...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | GTCCCTCTCTGGGGGTTTCTCCTTATTCTTAACTCATGGGCCCTGAAGCCAGATCGTCCCCAAATCTTGTaGGGACCTCCTTCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VPLWGFLLILNSWALKPDRPQIL*GPPSAS Trigger: AGATGCTGAAGGAGGTCCCCACAAGATTTGGGGACG...ATCTGGCTTCAGGGCCCATGAGTTAAGAATAAGGAGAAACCCCCAGAGAGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | CTCGTCAGTAGCTATGCGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAGAATCATGGGCTTGCTaGCCTGGCGCTCGGCATATT | + |
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Preference number: 4 (lower is better) Translates to: LVSSYASNVSSYASNALTESWAC*PGARHI Trigger: AATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTC...TGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCGCATAGCTACTGACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCGACCAGCTCTTTAGGTaGAAGGGATTTTACCACTAC | + |
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Preference number: 4 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGDQLFR*KGFYHY Trigger: GTAGTGGTAAAATCCCTTTCACCTAAAGAGCTGGTC...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | ATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCCAGTGTGATAGGTATAGGGCCTaGGGTGTCATTGACTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: MSVAMQAMRSQPMGDGQCDRYRA*GVIDFS Trigger: CGAAAAGTCAATGACACCCCAGGCCCTATACCTATC...ACACTGGCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | AAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTAAGTAGCAGTAAAGCCTaGGCGGCTGGAGCAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KLEGKELELNKPAGSPKVSSSKA*AAGAGP Trigger: GGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACT...TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | AAGCGAGGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGATGGGCTTGCTGGCCTaGCGCTCGGCATATTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KRGRQSFFSCPYGIFVMLMGLLA*RSAYFC Trigger: GCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCAT...CAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCCTCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAGACAGTCGAGCCTCCCCAAACACTTTGCCCTTCATAATTGAATATAAATCAGGCCTCCTCCGGTaGCACTGGCAGATGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: GGDSRASPNTLPFIIEYKSGLLR*HWQMDV Trigger: CACATCCATCTGCCAGTGCCACCGGAGGAGGCCTGA...TTTATATTCAATTATGAAGGGCAAAGTGTTTGGGGAGGCTCGACTGTCTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CTGGTTTCTCTGGTCCTTCACAGCTTAGCATCTTTCACAAGTCTTAAAGATGCAGTTTCCTGCCAGACCTaGGGGTCATCTTCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LVSLVLHSLASFTSLKDAVSCQT*GSSSGQ Trigger: CTGCCCGGAAGATGACCCTCAGGTCTGGCAGGAAAC...TGCATCTTTAAGACTTGTGAAAGATGCTAAGCTGTGAAGGACCAGAGAAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCGACCTTTCTTGCCAGTaGCAGCAAAATTTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGDLSCQ*QQNFIR Trigger: TCTGATGAAATTTTGCTGTCACTGGCAAGAAAGGTC...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR GCA 90 bp | GTCCCTCTCTGGGGGTTTCTCCTTATTCTTAACTCATGGGCCCTGAAGCCAGATGAGCCACATGTTCACTaGCATGAAGGATCTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: VPLWGFLLILNSWALKPDEPHVH*HEGSLS Trigger: AGATAGAGATCCTTCATGGCAGTGAACATGTGGCTC...ATCTGGCTTCAGGGCCCATGAGTTAAGAATAAGGAGAAACCCCCAGAGAGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR GCA 90 bp | GGAGGAGACAGTCGAGCCTCCCCAAACACTTTGCCCTTCATAATTGAATATAAAGACAGAAGTACCAACTaGAGCCTCTCCTCCCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GGDSRASPNTLPFIIEYKDRSTN*SLSSRL Trigger: TAGCCGGGAGGAGAGGCTGCAGTTGGTACTTCTGTC...TTTATATTCAATTATGAAGGGCAAAGTGTTTGGGGAGGCTCGACTGTCTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | AAGCGAGGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGCTGTGGTTCACTGGCTaGACAAGACAGGGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KRGRQSFFSCPYGIFVMLLWFTG*TRQGFL Trigger: CAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAG...CAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCCTCGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | CGAGCAATGTCAGTAGCTATGCAAGCAATGCGCTCACAACCGATGGGTGACGGCCCGTCCACGTTCACTTaGTACTTGTACTTAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RAMSVAMQAMRSQPMGDGPSTFT*YLYLKK Trigger: TTTCTTTAAGTACAAGTACCAAGTGAACGTGGACGG...GCCGTCACCCATCGGTTGTGAGCGCATTGCTTGCATAGCTACTGACATTGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | AAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTAGTGCCATCATCCGGCTaGGGAACAAGCTCCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: KLEGKELELNKPAGSPKVVPSSG*GTSSIP Trigger: TGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCAC...TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CTGGTTTCTCTGGTCCTTCACAGCTTAGCATCTTTCACAAGTCTTAAAGATGCAGGCCCTGTGTTTCCCTaGACGGAGAGGAGATCATTT | + |
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Preference number: 4 (lower is better) Translates to: LVSLVLHSLASFTSLKDAGPVFP*TERRSF Trigger: AAATGATCTCCTCTCCGTTCAGGGAAACACAGGGCC...TGCATCTTTAAGACTTGTGAAAGATGCTAAGCTGTGAAGGACCAGAGAAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR GCA 90 bp | AAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTATCATTGACTTTTCGATaGTCCAAGGGCCAATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KLEGKELELNKPAGSPKVSLTFR*SKGQSP Trigger: TGGAGATTGGCCCTTGGAGCATCGAAAAGTCAATGA...TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | AAGCGAGGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGGCTGTGGATTTTCTTTaGACAGAAGTACCAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: KRGRQSFFSCPYGIFVMLAVDFL*TEVPTA Trigger: TGCAGTTGGTACTTCTGTCCAAAGAAAATCCACAGC...CAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCCTCGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGCAGTCTTTCTTCTCATGTCCATATGGGATATTTGTCATGCTGATATTTTCCTTCAGCATCTGCTaGAGATTAATGCTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQSFFSCPYGIFVMLIFSFSIC*RLMLGK Trigger: CTTCCCCAGCATTAATCTCCAGCAGATGCTGAAGGA...AAATATCAGCATGACAAATATCCCATATGGACATGAGAAGAAAGACTGCCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR CAA 72 bp | AGCTTTCATTCCCGCATAATTAAAACTGGTTTCTTCTaGTTGATGGTGGTGCTCAATTCCTCCACTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHSRIIKTGFF*LMVVLNSSTRQ Trigger: CTGACGAGTGGAGGAATTGAGCACCACCATCAACAAGAAGAAACCAGTTTTAATTATGCGGGAATGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | CTGGTTTCTCTGGTCCTTCACAGCTTAGCATCTTTCACAAGTCTTAAAGATGCAATTTTACCACTACTTTaGACTGTGTTTGACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVSLVLHSLASFTSLKDAILPLL*TVFDLA Trigger: CGCCAGGTCAAACACAGTTCAAAGTAGTGGTAAAAT...TGCATCTTTAAGACTTGTGAAAGATGCTAAGCTGTGAAGGACCAGAGAAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR TCA 90 bp | AAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTACATCAGAGAACATTTTaGAGTCTGTGTATTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLEGKELELNKPAGSPKVHQRTF*SLCISP Trigger: TGGGGAAATACACAGACTTCAAAATGTTCTCTGATG...TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR CAA 72 bp | CTATATGGACAATTGGTTAAGTTGGAAGGGAAGGAATaGGAGCTTAATAAACCAGCTGGTTCCCCTAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYGQLVKLEGKE*ELNKPAGSPKV Trigger: TACCTTAGGGGAACCAGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CCA 90 bp | CTATATGGACAATTGGTTAAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCACAGTCACAGTACTCGTaGTACACGGGTCCTTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYGQLVKLEGKELELNKPQSQYS*YTGPFK Trigger: TTTAAAAGGACCCGTGTACCACGAGTACTGTGACTG...TGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR CAA 72 bp | AAAGTGGCTAATGGACTATATGGACAATTGGTTAAGTaGGAAGGGAAGGAATTGGAGCTTAATAAACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVANGLYGQLVK*EGKELELNKPA Trigger: AGCTGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAGTCCATTAGCCACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| 3UTR CAA 72 bp | TCAGTATTAAAAGTGGCTAATGGACTATATGGACAATaGGTTAAGTTGGAAGGGAAGGAATTGGAGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKVANGLYGQ*VKLEGKELELN Trigger: ATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAGTCCATTAGCCACTTTTAATACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS CCA 90 bp | GGCCTCCTCCGGTGGCACTGGCAGATGGATGTGCCATCATCCGGCTaGGGAACAAGCTCCATTCCATCACGAATCATGGGCTTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLRWHWQMDVPSSG*GTSSIPSRIMGLLA Trigger: GGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATCTGCCAGTGCCACCGGAGGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS GCA 90 bp | GCTCTTCCCTCTCAGGCCTCCTCCGGTGGCACTGGCAGATGGATGTaGCATCATCCGGCTGGGGAACAAGCTCCATTCCATCACGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPSQASSGGTGRWM*HHPAGEQAPFHHES Trigger: TGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATCTGCCAGTGCCACCGGAGGAGGCCTGAGAGGGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS CCA 90 bp | GCTGGGGAAGGAAACAAAATCCTGCTCGATCTGTGGTTCACTGGCTaGACAAGACAGGGTTTCCTGCCAGACCTGAGGGTCATCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGEGNKILLDLWFTG*TRQGFLPDLRVIFR Trigger: CCGGAAGATGACCCTCAGGTCTGGCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCCTTCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS CCA 90 bp | TGCCATCATCCGGCTGGGGAACAAGCTCCATTCCATCACGAATCATaGGCTTGCTGGCCTGGCGCTCGGCATATTTCTGCAGTACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHHPAGEQAPFHHES*ACWPGARHISAVLC Trigger: ACAGAGTACTGCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 90 bp | CCGGCTGGGGAACAAGCTCCATTCCATCACGAATCATGGGCTTGCTaGCCTGGCGCTCGGCATATTTCTGCAGTACTCTGTAATAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGEQAPFHHESWAC*PGARHISAVLCNSS Trigger: GCTACTATTACAGAGTACTGCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 90 bp | GCTCGGCATATTTCTGCAGTACTCTGTAATAGTAGCAGTAAAGCCTaGGCGGCTGGAGCAGGTCCCTGGCAGTTAACTGCCCTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARHISAVLCNSSSKA*AAGAGPWQLTALLS Trigger: CGAAAGAAGGGCAGTTAACTGCCAGGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACTATTACAGAGTACTGCAGAAATATGCCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 90 bp | CTGGAGATTAATGCTGGGGAAGGAAACAAAATCCTGCTCGATCTGTaGTTCACTGGCTGGACAAGACAGGGTTTCCTGCCAGACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEINAGEGNKILLDL*FTGWTRQGFLPDLR Trigger: CCTCAGGTCTGGCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCCTTCCCCAGCATTAATCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS GCA 90 bp | CCTGCATCTAGCAGCTGTGGATTTTCTTTGGACAGAAGTACCAACTaGAGCCTCTCCTCCCGGCTATCTCTACCTCGGAAGAAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PASSSCGFSLDRSTN*SLSSRLSLPRKKAF Trigger: GAAAGCTTTCTTCCGAGGTAGAGATAGCCGGGAGGAGAGGCTGCAGTTGGTACTTCTGTCCAAAGAAAATCCACAGCTGCTAGATGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS TCA 90 bp | AGGGAGAGTGAGCCACATGTTCACTGCCATGAAGGATCTCTATCTTaGGCCCTTTATGGGCCGTCTCGTGCATCCTGTATCTCACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RESEPHVHCHEGSLS*ALYGPSRASCISPK Trigger: TTTTGGTGAGATACAGGATGCACGAGACGGCCCATAAAGGGCTCAAGATAGAGATCCTTCATGGCAGTGAACATGTGGCTCACTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS GCA 90 bp | TTCAGCATCTGCTGGAGATTAATGCTGGGGAAGGAAACAAAATCCTaGTCGATCTGTGGTTCACTGGCTGGACAAGACAGGGTTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSICWRLMLGKETKS*SICGSLAGQDRVSC Trigger: GCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCCTTCCCCAGCATTAATCTCCAGCAGATGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 90 bp | CTCTGTAATAGTAGCAGTAAAGCCTGGGCGGCTGGAGCAGGTCCCTaGCAGTTAACTGCCCTTCTTTCGCAATCTTCTTTGCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCNSSSKAWAAGAGP*QLTALLSQSSLLLH Trigger: ATGAAGAAGCAAAGAAGATTGCGAAAGAAGGGCAGTTAACTGCCAGGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACTATTACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS TCA 90 bp | GAGTGTGGAGTGGGTGACATCATATGTTGGAAGGATAATGTCTCTTaGGTCCAAGGAGCCACACCAGGAAATGATAGGTATAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ECGVGDIICWKDNVS*VQGATPGNDRYRAW Trigger: CCAGGCCCTATACCTATCATTTCCTGGTGTGGCTCCTTGGACTCAAGAGACATTATCCTTCCAACATATGATGTCACCCACTCCACACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
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| CDS-3UTR CAA 90 bp | ATCCAACTGGGTAAGCTGGGCTGGCCTGGAAGTCACCACAAATCTCAGGTAGGCTCTTCATCATTTTCCTaGGCCCATTTCACTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IQLGKLGWPGSHHKSQVGSSSFS*AHFTFS Trigger: AGAGAAAGTGAAATGGGCCAAGGAAAATGATGAAGA...GCCTACCTGAGATTTGTGGTGACTTCCAGGCCAGCCCAGCTTACCCAGTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 90 bp | GAGAGGAGATCATTTGTGACACCCCTCATTGCTTCGAGTGTGGAGTaGGTGACATCATATGTTGGAAGGATAATGTCTCTTGAGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERRSFVTPLIASSVE*VTSYVGRIMSLESK Trigger: CTTGGACTCAAGAGACATTATCCTTCCAACATATGATGTCACCCACTCCACACTCGAAGCAATGAGGGGTGTCACAAATGATCTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTCTCTGGGGGTTTCTCCTTATTCTTAACTCATGGGCCCTGAAGCCAGATCTTTCGCAATCTTCTTaGCTTCTTCATCATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLWGFLLILNSWALKPDLSQSS*LLHHFP Trigger: AGGAAAATGATGAAGAAGCAAAGAAGATTGCGAAAG...ATCTGGCTTCAGGGCCCATGAGTTAAGAATAAGGAGAAACCCCCAGAGAGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS TCA 90 bp | TCTGTCCAAAGGTTTAGGGACATAAATACGGACCAGCTCTTTAGGTaGAAGGGATTTTACCACTACTTTGAACTGTGTTTGACCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQRFRDINTDQLFR*KGFYHYFELCLTWR Trigger: CCGCCAGGTCAAACACAGTTCAAAGTAGTGGTAAAATCCCTTTCACCTAAAGAGCTGGTCCGTATTTATGTCCCTAAACCTTTGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CAA 90 bp | CTATATGGACAATTGGTTAAGTTGGAAGGGAAGGAATTGGAGCTTAATAAACCAGGGCCTGGGGTGTCATaGACTTTTCGATGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYGQLVKLEGKELELNKPGPGVS*TFRCSK Trigger: CTTGGAGCATCGAAAAGTCAATGACACCCCAGGCCC...TGGTTTATTAAGCTCCAATTCCTTCCCTTCCAACTTAACCAATTGTCCATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CAA 90 bp | CTGGTTTCTCTGGTCCTTCACAGCTTAGCATCTTTCACAAGTCTTAAAGATGCAAGCTGTGGATTTTCTTaGGACAGAAGTACCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSLVLHSLASFTSLKDASCGFS*DRSTNC Trigger: GCAGTTGGTACTTCTGTCCAAAGAAAATCCACAGCT...TGCATCTTTAAGACTTGTGAAAGATGCTAAGCTGTGAAGGACCAGAGAAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS-3UTR CAA 90 bp | CTGGTTTCTCTGGTCCTTCACAGCTTAGCATCTTTCACAAGTCTTAAAGATGCATCATCAGAGAACATTTaGAAGTCTGTGTATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVSLVLHSLASFTSLKDASSENI*KSVYFP Trigger: GGGGAAATACACAGACTTCAAAATGTTCTCTGATGA...TGCATCTTTAAGACTTGTGAAAGATGCTAAGCTGTGAAGGACCAGAGAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | CTTCCCTCTCAGGCCTCCTCCGGTGGCACTGGCAGATaGATGTGCCATCATCCGGCTGGGGAACAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSQASSGGTGR*MCHHPAGEQAP Trigger: TGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATCTGCCAGTGCCACCGGAGGAGGCCTGAGAGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS GCA 72 bp | TCTCAGGCCTCCTCCGGTGGCACTGGCAGATGGATGTaGCATCATCCGGCTGGGGAACAAGCTCCATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQASSGGTGRWM*HHPAGEQAPFH Trigger: ATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATCTGCCAGTGCCACCGGAGGAGGCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | CCGGCTGGGGAACAAGCTCCATTCCATCACGAATCATaGGCTTGCTGGCCTGGCGCTCGGCATATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGEQAPFHHES*ACWPGARHISA Trigger: TGCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | CGGTGGCACTGGCAGATGGATGTGCCATCATCCGGCTaGGGAACAAGCTCCATTCCATCACGAATCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RWHWQMDVPSSG*GTSSIPSRIMG Trigger: GCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATCTGCCAGTGCCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | GGAAACAAAATCCTGCTCGATCTGTGGTTCACTGGCTaGACAAGACAGGGTTTCCTGCCAGACCTGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GNKILLDLWFTG*TRQGFLPDLRV Trigger: GACCCTCAGGTCTGGCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | AGTAGCAGTAAAGCCTGGGCGGCTGGAGCAGGTCCCTaGCAGTTAACTGCCCTTCTTTCGCAATCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSKAWAAGAGP*QLTALLSQSSL Trigger: CAAAGAAGATTGCGAAAGAAGGGCAGTTAACTGCCAGGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CAA 72 bp | TGGGGAACAAGCTCCATTCCATCACGAATCATGGGCTaGCTGGCCTGGCGCTCGGCATATTTCTGCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: WGTSSIPSRIMG*LAWRSAYFCST Trigger: AGTACTGCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS TCA 72 bp | GGTGAAAGGGATTTTACCACTACTTTGAACTGTGTTTaGCCTGGCGGCGAGCTAGTGAAGTTCCGGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GERDFTTTLNCV*PGGELVKFRPS Trigger: GGACGGCCGGAACTTCACTAGCTCGCCGCCAGGTCAAACACAGTTCAAAGTAGTGGTAAAATCCCTTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS GCA 72 bp | AGCAGCTGTGGATTTTCTTTGGACAGAAGTACCAACTaGAGCCTCTCCTCCCGGCTATCTCTACCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSCGFSLDRSTN*SLSSRLSLPRK Trigger: CTTCCGAGGTAGAGATAGCCGGGAGGAGAGGCTGCAGTTGGTACTTCTGTCCAAAGAAAATCCACAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | CAAGGAGCCACACCAGGAAATGATAGGTATAGGGCCTaGGGTGTCATTGACTTTTCGATGCTCCAAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGATPGNDRYRA*GVIDFSMLQGP Trigger: TGGCCCTTGGAGCATCGAAAAGTCAATGACACCCCAGGCCCTATACCTATCATTTCCTGGTGTGGCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
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| CDS CCA 72 bp | ATTTCTGCAGTACTCTGTAATAGTAGCAGTAAAGCCTaGGCGGCTGGAGCAGGTCCCTGGCAGTTAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISAVLCNSSSKA*AAGAGPWQLTA Trigger: GGCAGTTAACTGCCAGGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACTATTACAGAGTACTGCAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | GAACAAGCTCCATTCCATCACGAATCATGGGCTTGCTaGCCTGGCGCTCGGCATATTTCTGCAGTACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EQAPFHHESWAC*PGARHISAVLC Trigger: ACAGAGTACTGCAGAAATATGCCGAGCGCCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS TCA 72 bp | GAGCCACATGTTCACTGCCATGAAGGATCTCTATCTTaGGCCCTTTATGGGCCGTCTCGTGCATCCTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: EPHVHCHEGSLS*ALYGPSRASCI Trigger: GATACAGGATGCACGAGACGGCCCATAAAGGGCTCAAGATAGAGATCCTTCATGGCAGTGAACATGTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
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| CDS CCA 72 bp | AATGCTGGGGAAGGAAACAAAATCCTGCTCGATCTGTaGTTCACTGGCTGGACAAGACAGGGTTTCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: NAGEGNKILLDL*FTGWTRQGFLP Trigger: TGGCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCCTTCCCCAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS CAA 72 bp | CACCAGGAAATGATAGGTATAGGGCCTGGGGTGTCATaGACTTTTCGATGCTCCAAGGGCCAATCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HQEMIGIGPGVS*TFRCSKGQSPR Trigger: CCTTGGAGATTGGCCCTTGGAGCATCGAAAAGTCAATGACACCCCAGGCCCTATACCTATCATTTCCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
||
| CDS GCA 72 bp | TGCTGGAGATTAATGCTGGGGAAGGAAACAAAATCCTaGTCGATCTGTGGTTCACTGGCTGGACAAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CWRLMLGKETKS*SICGSLAGQDR Trigger: CCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTGTTTCCTTCCCCAGCATTAATCTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS GCA 72 bp | CTGAACGGAGAGGAGATCATTTGTGACACCCCTCATTaGTTCGAGTGTGGAGTGGGTGACATCATATGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LNGEEIICDTPH*FECGVGDIICW Trigger: CCAACATATGATGTCACCCACTCCACACTCGAAGCAATGAGGGGTGTCACAAATGATCTCCTCTCCGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
||
| CDS CAA 90 bp | GAGGTACGGATACCTGTAGGCGGCCACAGTCCCGTCCACGTTCACTaGGTACTTGTACTTAAAGAAATCAAAGAAACCCATCAACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVRIPVGGHSPVHVH*VLVLKEIKETHQLG Trigger: GCCAAGTTGATGGGTTTCTTTGATTTCTTTAAGTACAAGTACCAAGTGAACGTGGACGGGACTGTGGCCGCCTACAGGTATCCGTACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS GCA 72 bp | AGGATCTCTATCTTGAGCCCTTTATGGGCCGTCTCGTaGATCCTGTATCTCACCAAAAACGTTCCATCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RISILSPLWAVS*ILYLTKNVPSF Trigger: AAATGATGGAACGTTTTTGGTGAGATACAGGATGCACGAGACGGCCCATAAAGGGCTCAAGATAGAGATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS CAA 72 bp | ATACCTGTAGGCGGCCACAGTCCCGTCCACGTTCACTaGGTACTTGTACTTAAAGAAATCAAAGAAACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IPVGGHSPVHVH*VLVLKEIKETH Trigger: ATGGGTTTCTTTGATTTCTTTAAGTACAAGTACCAAGTGAACGTGGACGGGACTGTGGCCGCCTACAGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS TCA 72 bp | TGTATTTCCCCAAAGATCTCCGGTAGATGTGGTTATTaGGAATTGTGTAATGAACAACAGCACCCCGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: CISPKISGRCGY*ELCNEQQHPAR Trigger: ACGAGCGGGGTGCTGTTGTTCATTACACAATTCTCAATAACCACATCTACCGGAGATCTTTGGGGAAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037853.5 |
||
| CDS TCA 72 bp | GTGGGTGACATCATATGTTGGAAGGATAATGTCTCTTaGGTCCAAGGAGCCACACCAGGAAATGATAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: VGDIICWKDNVS*VQGATPGNDRY Trigger: ATACCTATCATTTCCTGGTGTGGCTCCTTGGACTCAAGAGACATTATCCTTCCAACATATGATGTCACCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
||
| CDS CCA 72 bp | TCATTTGTGACACCCCTCATTGCTTCGAGTGTGGAGTaGGTGACATCATATGTTGGAAGGATAATGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SFVTPLIASSVE*VTSYVGRIMSL Trigger: AAGAGACATTATCCTTCCAACATATGATGTCACCCACTCCACACTCGAAGCAATGAGGGGTGTCACAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037853.5 ENSMUST00000214164.2 |
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