Pregenerated sensors for POGLUT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026047Ensembl transcript IDs: ENSMUST00000027213.14, ENSMUST00000065767.9, ENSMUST00000152643.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGCACTGTCTTCCAAAGGACAGTCACAGTTCTCATGGTAAACTaGTCCTATGACTACATATTTAACTTGATTATTCAGTCAGGAGTT | + |
|
Preference number: 1 (lower is better) Translates to: GCTVFQRTVTVLMVN*SYDYIFNLIIQSGV Trigger: AACTCCTGACTGAATAATCAAGTTAAATATGTAGTCATAGGACCAGTTTACCATGAGAACTGTGACTGTCCTTTGGAAGACAGTGCAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAGTCCTCAGAGCACCATaGTTTGAACAGAAGATATTT | + |
|
Preference number: 2 (lower is better) Translates to: FAFGGLFESEHSPESRTQVLRAP*FEQKIF Trigger: AAATATCTTCTGTTCAAATCATGGTGCTCTGAGGAC...TTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAATCAAGGACCCAAACTCGCCTATTTCTTCTGCTCATAGGTAATAACTGTTGTAAAAGACAGTCATaGGAACACTGCATAAGACGA | + |
|
Preference number: 2 (lower is better) Translates to: PESRTQTRLFLLLIGNNCCKRQS*EHCIRR Trigger: TCGTCTTATGCAGTGTTCCCATGACTGTCTTTTACA...ACAGTTATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAACTCGCCTATGGGCACACGTAAATTaGACATTGTCTGTGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GGLFESEHSPESRTQTRLWAHVN*TLSVKH Trigger: ATGTTTCACAGACAATGTCAAATTTACGTGTGCCCA...TAGGCGAGTTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGACTTTTGGAGGCCTGTTaGAATCAGAGCACTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLALNSQNLLVLTSEVLGLLEAC*NQSTHQ Trigger: CTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAG...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR CCA 72 bp | GTCTTCCAAAGGACAGTCACAGTTCTCATGGTAAACTaGTCCTATGACTACATATTTAACTTGATTATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VFQRTVTVLMVN*SYDYIFNLIIQ Trigger: CTGAATAATCAAGTTAAATATGTAGTCATAGGACCAGTTTACCATGAGAACTGTGACTGTCCTTTGGAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAACTCTCTCCGCCGGTCTaGGCAAGTGCTGGCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEACLNQSTHQNQGPKLSPPV*ASAGTV Trigger: GACTGTGCCAGCACTTGCCCAGACCGGCGGAGAGAG...TTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAACCAAACTCAGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAATCACTGAGGCCGGTCTGGGCAAGTaGTGGCACAGTCCCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WEPNSGPLEKQPVFLITEAGLGK*WHSPQK Trigger: TTTCTGGGGACTGTGCCAGCACTTGCCCAGACCGGC...CTCAGTGATTAAGAACACTGGCTGCTTTTCCAAAGGACCTGAGTTTGGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTGAATTGTAATGTGGGTGCTGGGAACCAAACTCAGGTCCTTTGGAAACTCTCTCCGCCGGTCTaGGCAAGTGCTGGCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLNCNVGAGNQTQVLWKLSPPV*ASAGTV Trigger: GACTGTGCCAGCACTTGCCCAGACCGGCGGAGAGAG...TTTCCAAAGGACCTGAGTTTGGTTCCCAGCACCCACATTACAATTCAAGACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAACTCGCCTACCCTCCAGACAGCTGTaGAATTCTTACTTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLFESEHSPESRTQTRLPSRQL*NSYFPR Trigger: CCTGGGAAAGTAAGAATTCCACAGCTGTCTGGAGGG...TAGGCGAGTTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCAAGGACCCAAACTCGCCTATTTCTTCTGCTCATAGGTAATAACTGTGCCGGTCTGGGCAAGTaGTGGCACAGTCCCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PESRTQTRLFLLLIGNNCAGLGK*WHSPQK Trigger: TTTCTGGGGACTGTGCCAGCACTTGCCCAGACCGGC...ACAGTTATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGAGGTCTGGGCAAGTGCTaGCACAGTCCCCAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLALNSQNLLVLTSEVLGGLGKC*HSPQKK Trigger: CTTTTTCTGGGGACTGTGCCAGCACTTGCCCAGACC...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | AATCAGAGCACTCACCAGAATCAAGGACCCAAACTCGCCTATTTCTTCTGCTCATATTTCGCTCTTCTCTaGGCTCAGCCTCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQSTHQNQGPKLAYFFCSYFALL*AQPPLS Trigger: GGAGAGAGGAGGCTGAGCCCAGAGAAGAGCGAAATA...TGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGGTGAGTGCTCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCGCTCTAGTCTCTCTTTaGGGCTGTCTCGGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGALVSL*GCLGPS Trigger: GGAGGGGCCGAGACAGCCGCAAAGAGAGACTAGAGC...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAGACTTACTCGGCCCATaGTTTCTAGAACAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FAFGGLFESEHSPESRTQDLLGP*FLEQSQ Trigger: CTGACTCTGTTCTAGAAACCATGGGCCGAGTAAGTC...TTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTTGAATTGTAATGTGGGTGCTGGGAACCAAACTCAGGTCCTTTGGAAAGACTCGGCAACATGTTaGCCATGGTGTTTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLNCNVGAGNQTQVLWKDSATC*PWCLTS Trigger: AGAGGTTAAACACCATGGGCAACATGTTGCCGAGTC...TTTCCAAAGGACCTGAGTTTGGTTCCCAGCACCCACATTACAATTCAAGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGGACAGTCACAGTTCTCATGGTAAACTGGTCCTATGACTACATATTTGGTCTGGGCAAGTGCTaGCACAGTCCCCAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQRTVTVLMVNWSYDYIFGLGKC*HSPQKK Trigger: CTTTTTCTGGGGACTGTGCCAGCACTTGCCCAGACC...AAATATGTAGTCATAGGACCAGTTTACCATGAGAACTGTGACTGTCCTTTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAAAAATGTGTTTCACGATaGGCCCATACAGGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEACLNQSTHQNQGPKKCVSR*AHTGFR Trigger: ACGAAAGCCTGTATGGGCCCATCGTGAAACACATTT...TTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAAATACCCTCTCGAATTTaGGGCTCGCTCACTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEACLNQSTHQNQGPKIPSRI*GSLTCK Trigger: TTTACAAGTGAGCGAGCCCCAAATTCGAGAGGGTAT...TTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCAAGGACCCAAACTCGCCTATTTCTTCTGCTCATAGGTAATAACTGTGACTCGGCAACATGTTaGCCATGGTGTTTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PESRTQTRLFLLLIGNNCDSATC*PWCLTS Trigger: AGAGGTTAAACACCATGGGCAACATGTTGCCGAGTC...ACAGTTATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR CAA 72 bp | ATAGGCATGAACCACCACAATTGGCTGAGTTTTGTTTaGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGMNHHNWLSFV*LLEACLNQSTH Trigger: GTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAAACAAAACTCAGCCAATTGTGGTGGTTCATGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAGCTCACCATGAGTCTTaGTATAAACCTTATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FAFGGLFESEHSPESRTQAHHES*YKPYCP Trigger: AGGACAATAAGGTTTATATCAAGACTCATGGTGAGC...TTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGAGGTACGCTGCCACAGTaGCATCAATATTTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLALNSQNLLVLTSEVLGGTLPQ*HQYLSD Trigger: ATCAGATAAATATTGATGGCACTGTGGCAGCGTACC...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGAAACAGTAGGGAAATGTaGCAGATCTTTCTGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLALNSQNLLVLTSEVLGNSREM*QIFLNL Trigger: CAGATTCAGAAAGATCTGGCACATTTCCCTACTGTT...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAATCAAGGACCCAAACTCGCCTATTTCTTCTGCTCATAGGTAATAACTGTAGTGTTCATAGTAGATaGAGTCCTGCTTCAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: PESRTQTRLFLLLIGNNCSVHSR*SPASER Trigger: TCGTTCTGAAGCAGGACTCCATCTACTATGAACACT...ACAGTTATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR GCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCCACAGGCTTTGCCTCTaGCCAAATCGTTTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGHRLCL*PNRFGI Trigger: AATCCCAAAACGATTTGGGCAGAGGCAAAGCCTGTG...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCCAGGAAAAGATCGGCTaGATGTTGGAGTTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGQEKIG*MLELDF Trigger: GAAATCCAACTCCAACATTCAGCCGATCTTTTCCTG...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCAGCATCGATGAGCTCTaGGTGTTTTCTGCTAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGSIDEL*VFSAKL Trigger: AAGCTTAGCAGAAAACACCCAGAGCTCATCGATGCT...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | AGGACAGTCACAGTTCTCATGGTAAACTGGTCCTATGACTACATATTTAACTTGGAACACCTTTTCACCTaGAGAAGATGTAAACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVTVLMVNWSYDYIFNLEHLFT*RRCKLF Trigger: GAACAGTTTACATCTTCTCCAGGTGAAAAGGTGTTC...CAAGTTAAATATGTAGTCATAGGACCAGTTTACCATGAGAACTGTGACTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCCTTTTGCTATCTTCTTaGCCTCTGCATCATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGLLLSS*PLHHAL Trigger: AAGAGCATGATGCAGAGGCCAAGAAGATAGCAAAAG...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCCGCTTAGGTTACTTTTaGCTGGAATGTAATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGRLGYF*LECNVS Trigger: GGAAACATTACATTCCAGTCAAAAGTAACCTAAGCG...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCGAACACCTTTTCACCTaGAGAAGATGTAAACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFKTESYCLPTYYVAQTGEHLFT*RRCKLF Trigger: GAACAGTTTACATCTTCTCCAGGTGAAAAGGTGTTC...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| 3UTR CAA 72 bp | CTCATGGTAAACTGGTCCTATGACTACATATTTAACTaGATTATTCAGTCAGGAGTTACAGTCAGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMVNWSYDYIFN*IIQSGVTVSLE Trigger: TTCAAGACTGACTGTAACTCCTGACTGAATAATCAAGTTAAATATGTAGTCATAGGACCAGTTTACCATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152643.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAAGCTCTAGTCTCTCTTaGCGGCTGTCTCGGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FAFGGLFESEHSPESRTQSSSLS*RLSRPL Trigger: GAGGGGCCGAGACAGCCGCAAAGAGAGACTAGAGCT...TTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTGGAGGCCTGTTTGAATCAGAGCACTCACCAGAATCAAGGACCCAAGCTTTTGCTATCTTCTaGGCCTCTGCATCATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FAFGGLFESEHSPESRTQAFAIF*ASASCS Trigger: AGAGCATGATGCAGAGGCCAAGAAGATAGCAAAAGC...TTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CAA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGAATAGTGACACAGGCTTaGCCTCTGCCCAAATCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLALNSQNLLVLTSEVLGIVTQA*PLPKSF Trigger: AAACGATTTGGGCAGAGGCAAAGCCTGTGTCACTAT...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CAA 90 bp | AGACTGGCCTTGAACTCACAGAATCTTCTTGTCTTAACCTCTGAAGTGCTAGGATCTGAATCTGAGAGATaGTTTCCGAACAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RLALNSQNLLVLTSEVLGSESER*FPNSSS Trigger: AGATGAACTGTTCGGAAACAATCTCTCAGATTCAGA...TCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS-3UTR CAA 90 bp | CATTTTAAAACAGAGTCTTATTGTCTTCCAACTTACTATGTAGCTCAGACTGGCCGCTCACTTGTAAATTaGCATAGCCCTGGAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HFKTESYCLPTYYVAQTGRSLVN*HSPGTV Trigger: AACTGTTCCAGGGCTATGCAAATTTACAAGTGAGCG...GCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065767.9 |
||
| CDS CCA 72 bp | CTTACTATGAAGGAACCGTCCTTTCGATCTAAAACCTaGACACCAACTCTCGTGAACTGCTCATCGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTMKEPSFRSKT*TPTLVNCSSGA Trigger: AGCACCCGATGAGCAGTTCACGAGAGTTGGTGTCCAGGTTTTAGATCGAAAGGACGGTTCCTTCATAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027213.14 ENSMUST00000065767.9 ENSMUST00000152643.2 |
||