RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POGK (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040596

Ensembl transcript IDs: ENSMUST00000127596.3, ENSMUST00000128861.3, ENSMUST00000131487.8, ENSMUST00000135673.8, ENSMUST00000148243.8, ENSMUST00000169324.8

Found 551 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCTaGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGTC +
Preference number: 1 (lower is better)
Translates to: RDSAPLSLALAGACL*MCELHCPAALLPRV
Trigger: GACACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR GCA 90 bp CTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTaGTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGTGGGAGGT +
Preference number: 1 (lower is better)
Translates to: LCCWLGRSGCCPWVK*WGLRSQWWWEVVGG
Trigger: ACCTCCCACCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR TCA 90 bp TGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCTGGATGTGTaGGCTGCACTGTCCGGCTGCCTTATTACCCCGTGTCCTTTGACT +
Preference number: 1 (lower is better)
Translates to: CPIVPRPGWSLSLDV*AALSGCLITPCPLT
Trigger: AGTCAAAGGACACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR GCA 90 bp GTCGTCTCCTCAGTGTTCCTGTCTAGAGCACCTGTGCATGCTCTGTaGTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGC +
Preference number: 1 (lower is better)
Translates to: VVSSVFLSRAPVHAL*CWLGRSGCCPWVKC
Trigger: GCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGGTGCTCTAGACAGGAACACTGAGGAGACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 90 bp TCCTCAGTGTTCCTGTCTAGAGCACCTGTGCATGCTCTGTGCTGTTaGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: SSVFLSRAPVHALCC*LGRSGCCPWVKCWG
Trigger: ACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGGTGCTCTAGACAGGAACACTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 90 bp CCAGAGCAAACCTTCCATTCTTGGGGCCTCGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCTGTGGCTTCACTTTGCGCCAGTCTC +
Preference number: 1 (lower is better)
Translates to: PEQTFHSWGLGMPAA*HEHFGAVASLCASL
Trigger: GAGACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp TGGCATGGCACCGGAAGCCATTCAGGATCAGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCCGTCTCCACACAACTTCCAACCAGT +
Preference number: 1 (lower is better)
Translates to: WHGTGSHSGSASLAV*AQLQFSVSTQLPTS
Trigger: ACTGGTTGGAAGTTGTGTGGAGACGGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp GCAAACCTTCCATTCTTGGGGCCTCGGAATGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGCTTCACTTTGCGCCAGTCTCGAACA +
Preference number: 1 (lower is better)
Translates to: ANLPFLGPRNARRMA*AFWSCGFTLRQSRT
Trigger: TGTTCGAGACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp CATAGTCGTGTGTCCTGCGCAGAGCCAGCACACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTTGAGGGACTG +
Preference number: 1 (lower is better)
Translates to: HSRVSCAEPAHSAGK*QAFQSGPRPGVEGL
Trigger: CAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp CAACGACATCCAGCACCTGCAGCTGGGAGGTCAGGCCCCCTGGGATaGTCACCATGTCCGTGTTCATGTTCTCCATGGAACTCTTCACAG +
Preference number: 1 (lower is better)
Translates to: QRHPAPAAGRSGPLG*SPCPCSCSPWNSSQ
Trigger: CTGTGAAGAGTTCCATGGAGAACATGAACACGGACATGGTGATCATCCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGATGTCGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp CATACTCAGCCACTCGCTGGTCTACCAGAGCAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCCGCATGGCATGAGCATTTTGGAGCT +
Preference number: 1 (lower is better)
Translates to: HTQPLAGLPEQTFHS*GLGMPAAWHEHFGA
Trigger: AGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp GGGTCCCCTTTGGCCTGCATGTATCTGACATACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTTCCATTCTTGGGGCCTCGGAATGCC +
Preference number: 1 (lower is better)
Translates to: GSPLACMYLTYSATR*STRANLPFLGPRNA
Trigger: GGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp CATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCTGGATGTGTGAGCTaGACTGTCCGGCTGCCTTATTACCCCGTGTCCTTTGACTTTATT +
Preference number: 1 (lower is better)
Translates to: HCPSPWLEPVSGCVS*TVRLPYYPVSFDFI
Trigger: AATAAAGTCAAAGGACACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR GCA 90 bp TCGCTGGTCTACCAGAGCAAACCTTCCATTCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGCATTTTGGAGCTGTGGCTTCACTTT +
Preference number: 1 (lower is better)
Translates to: SLVYQSKPSILGASE*PPHGMSILELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp GTAGACAACGACATCCAGCACCTGCAGCTGGGAGGTCAGGCCCCCTaGGATGATCACCATGTCCGTGTTCATGTTCTCCATGGAACTCTT +
Preference number: 1 (lower is better)
Translates to: VDNDIQHLQLGGQAP*DDHHVRVHVLHGTL
Trigger: AAGAGTTCCATGGAGAACATGAACACGGACATGGTGATCATCCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGATGTCGTTGTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp CTGCTATCCAACAGGGGCAGCGGAGTGGTCAGCAGAAAGGGAGCCTaGATCCAAGGCTTTACAGAGAGTAGGGGCATGTGGAGAACTATC +
Preference number: 1 (lower is better)
Translates to: LLSNRGSGVVSRKGA*IQGFTESRGMWRTI
Trigger: GATAGTTCTCCACATGCCCCTACTCTCTGTAAAGCCTTGGATTCAGGCTCCCTTTCTGCTGACCACTCCGCTGCCCCTGTTGGATAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 90 bp AGCTACAGGTGTCAAGCTGCAGGATGTGGGTGCTGGGAACCAAACTaGAAGAATAGCATGCTCTTAACTGCTAAGCCAGCTCTGCAGCCC +
Preference number: 1 (lower is better)
Translates to: SYRCQAAGCGCWEPN*KNSMLLTAKPALQP
Trigger: GGGCTGCAGAGCTGGCTTAGCAGTTAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCACCCACATCCTGCAGCTTGACACCTGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 90 bp GCTTTCAACTGCATTGCCTCCCTAGTGATAGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCAGCCACTCGCTGGTCTACCAGAGCA +
Preference number: 1 (lower is better)
Translates to: AFNCIASLVIGSPLA*MYLTYSATRWSTRA
Trigger: TGCTCTGGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp GCTGTTTGCCTTCCATGTGCCCCTTACTCTGGTCCTTCTCCTGTTTaGTCAAAGTTTGTGTTTAGGGGCTCTGGGCCTTTGCTAGTGTGG +
Preference number: 1 (lower is better)
Translates to: AVCLPCAPYSGPSPV*SKFVFRGSGPLLVW
Trigger: CCACACTAGCAAAGGCCCAGAGCCCCTAAACACAAACTTTGAGCAAACAGGAGAAGGACCAGAGTAAGGGGCACATGGAAGGCAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 90 bp CTCCTGAATTCAGAGAGGCAGTTAGGAGTGGCAACTGGTCTTGGCTaGCCCCAGCAATGGAGAATTCCAAAAGGTGTAGCAGAGCATGCT +
Preference number: 1 (lower is better)
Translates to: LLNSERQLGVATGLG*PQQWRIPKGVAEHA
Trigger: AGCATGCTCTGCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 90 bp AATTTCTCCCTGCCTGGTGTCTTGACCAAGATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTAGAGGGGACTTCTAAGCAGATGGGC +
Preference number: 1 (lower is better)
Translates to: NFSLPGVLTKMGFSP*LSTVTLEGTSKQMG
Trigger: GCCCATCTGCTTAGAAGTCCCCTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp CAAAAGCTTTCCTGTAGTCTCGGCCTGTGTGGAAACAGCTCCTACTaGAGCACCTGTGAAGGTACACACACACTCACTCACACTCGGTGT +
Preference number: 1 (lower is better)
Translates to: QKLSCSLGLCGNSSY*STCEGTHTLTHTRC
Trigger: ACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGGTGCTTCAGTAGGAGCTGTTTCCACACAGGCCGAGACTACAGGAAAGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR CCA 90 bp TGTCTCCATCACTTCCCCCAGAAGCTGTACAAAGATCCTAACAACTaGAAGAGCAGACGTGGCATGTACCCATGTGCACAGCTGTGGCTT +
Preference number: 1 (lower is better)
Translates to: CLHHFPQKLYKDPNN*KSRRGMYPCAQLWL
Trigger: AAGCCACAGCTGTGCACATGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTGGGGGAAGTGATGGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 90 bp TACTCTCCTGAATTCAGAGAGGCAGTTAGGAGTGGCAACTGGTCTTaGCTGCCCCCAGCAATGGAGAATTCCAAAAGGTGTAGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: YSPEFREAVRSGNWS*LPPAMENSKRCSRA
Trigger: TGCTCTGCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 90 bp CGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTAGACTaGGTATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGG +
Preference number: 1 (lower is better)
Translates to: RVEEGTVITATWWLD*VFGMTELAMALPMR
Trigger: CCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAATACTCAGTCTAGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR CCA 90 bp AACTGTGCATGTAACTGCAGATGTCAAAGGAGGCTAAGAGGTCATTaGACTCCTGAAACCGGAGCTACAGGTGTCAAGCTGCAGGATGTG +
Preference number: 1 (lower is better)
Translates to: NCACNCRCQRRLRGH*TPETGATGVKLQDV
Trigger: CACATCCTGCAGCTTGACACCTGTAGCTCCGGTTTCAGGAGTCCAATGACCTCTTAGCCTCCTTTGACATCTGCAGTTACATGCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 90 bp GTTGTATACTCTCCTGAATTCAGAGAGGCAGTTAGGAGTGGCAACTaGTCTTGGCTGCCCCCAGCAATGGAGAATTCCAAAAGGTGTAGC +
Preference number: 1 (lower is better)
Translates to: VVYSPEFREAVRSGN*SWLPPAMENSKRCS
Trigger: GCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAGAGTATACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 90 bp AGTGACAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGACAGGTCATACCTTCTCATCATTCT +
Preference number: 1 (lower is better)
Translates to: SDKLFSQVLGQVLRD*HFMPQRQVIPSHHS
Trigger: AGAATGATGAGAAGGTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp ACACTGACAGGACGTGGTAGATGGGACTGTCTGATAAGGTATTCATaGTGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTT +
Preference number: 1 (lower is better)
Translates to: TLTGRGRWDCLIRYS*CPPLGFSESLIAHF
Trigger: AAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCTACCACGTCCTGTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR GCA 90 bp TGGAATGTTCATTTCCTGGGCGATTTCAAGAGCTTTCAACTGCATTaGCTCCCTAGTGATAGGGTCCCCTTTGGCCTGCATGTATCTGAC +
Preference number: 1 (lower is better)
Translates to: WNVHFLGDFKSFQLH*LPSDRVPFGLHVSD
Trigger: GTCAGATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp AACAGTGTCAGTACACAGAGTTCTCAGGAGTCACGGTCATGTGTGTaGAACTCTGACAGACTGCGCAGGTTTATGACTGGTTACACAGTG +
Preference number: 1 (lower is better)
Translates to: NSVSTQSSQESRSCV*NSDRLRRFMTGYTV
Trigger: CACTGTGTAACCAGTCATAAACCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGACTCCTGAGAACTCTGTGTACTGACACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR CCA 90 bp ATTTCCCAGAGGACGTCACCTTCGTCCTCTAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGGACAATTGATTCACTTGAGATGCTG +
Preference number: 1 (lower is better)
Translates to: ISQRTSPSSSKLLEM*HFLNPWTIDSLEML
Trigger: CAGCATCTCAAGTGAATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGGTGACGTCCTCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp GGTCATACCTTCTCATCATTCTTCGACACCAGCCCAGACTTGCCTTaGACCCTTTCTCTGGAATGTTCATTTCCTGGGCGATTTCAAGAG +
Preference number: 1 (lower is better)
Translates to: GHTFSSFFDTSPDLP*TLSLECSFPGRFQE
Trigger: CTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATGAGAAGGTATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp TTCTCTGGAATGTTCATTTCCTGGGCGATTTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATAGGGTCCCCTTTGGCCTGCATGTAT +
Preference number: 1 (lower is better)
Translates to: FSGMFISWAISRAFN*IASLVIGSPLACMY
Trigger: ATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp ACTACTGTAGAAGTTGTCAGTGACTCATACCTACTCTTGTATGGTTaGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATT +
Preference number: 1 (lower is better)
Translates to: TTVEVVSDSYLLLYG*SLTAAVAYGPNPPI
Trigger: AATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAGAGTAGGTATGAGTCACTGACAACTTCTACAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR CCA 90 bp CAGCCCAGACTTGCCTTGAACCCTTTCTCTGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTCAACTGCATTGCCTCCCTAGTGATA +
Preference number: 1 (lower is better)
Translates to: QPRLALNPFSGMFIS*AISRAFNCIASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 90 bp CCTTCGTCCTCTAAGTTGCTGGAGATGTGGCACTTTCTGAACCCCTaGACAATTGATTCACTTGAGATGCTGTTCCATGCAACCATGATC +
Preference number: 1 (lower is better)
Translates to: PSSSKLLEMWHFLNP*TIDSLEMLFHATMI
Trigger: GATCATGGTTGCATGGAACAGCATCTCAAGTGAATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 90 bp CTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTaGGTCCTCTCAGTCACCCTCAGCCACACTTTCAGGACCACATTC +
Preference number: 1 (lower is better)
Translates to: LTSFPPNCFHHSSIF*VLSVTLSHTFRTTF
Trigger: GAATGTGGTCCTGAAAGTGTGGCTGAGGGTGACTGAGAGGACTCAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp CTTCACCTGAGTTCCAGGGATTGGACTCATTCAGTAAGGCTTGCTTaGCAATTATCTGCTGAGTGGCCCACAGAACATTTAGTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: LHLSSRDWTHSVRLA*QLSAEWPTEHLVSH
Trigger: ATGGGAAACTAAATGTTCTGTGGGCCACTCAGCAGATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR CCA 90 bp CCAATCACGAAGAGCTACAACAAGACAAAGTCCACCGCCAGCGCCTaGCAGCCAAAGAAGGACTTTTGCTCTGCTAAATTAGAATTTGAA +
Preference number: 1 (lower is better)
Translates to: PITKSYNKTKSTASA*QPKKDFCSAKLEFE
Trigger: TTCAAATTCTAATTTAGCAGAGCAAAAGTCCTTCTTTGGCTGCCAGGCGCTGGCGGTGGACTTTGTCTTGTTGTAGCTCTTCGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR CCA 90 bp CATCATTCTTCGACACCAGCCCAGACTTGCCTTGAACCCTTTCTCTaGAATGTTCATTTCCTGGGCGATTTCAAGAGCTTTCAACTGCAT +
Preference number: 1 (lower is better)
Translates to: HHSSTPAQTCLEPFL*NVHFLGDFKSFQLH
Trigger: ATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 90 bp TTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTaGCCTTTTGACAAAAATATTAAAGAAATTAACCAAGTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: LESNSSCGLRPKPSH*PFDKNIKEINQVSG
Trigger: CCCACTGACTTGGTTAATTTCTTTAATATTTTTGTCAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR GCA 90 bp GCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTaGCCTGAAGTTCAGCATTTTAGAAGAAAGTTGTCTCTTCAACCT +
Preference number: 1 (lower is better)
Translates to: AKGSATMLSNVSRQP*PEVQHFRRKLSLQP
Trigger: AGGTTGAAGAGACAACTTTCTTCTAAAATGCTGAACTTCAGGGCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 90 bp CCCCGGTCAGTCAGTCCGGTGTCTGTTGTTAGGGACAGTGCCCCATaGTCCCTCGCCCTGGCTGGAGCCTGTCTCTGGATGTGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: PRSVSPVSVVRDSAP*SLALAGACLWMCEL
Trigger: CAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACACCGGACTGACTGACCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR GCA 90 bp GGTCCTCGGCCAGGTGTTGAGGGACTGGCACTTTATGCCTCAGAGACAGGTCATCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGC +
Preference number: 2 (lower is better)
Translates to: GPRPGVEGLALYASETGHLGASE*PPHGMS
Trigger: GCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAG...ATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACTCAAGCTGCAGGATGTaGGTGCTGGGAACCAAACTG +
Preference number: 2 (lower is better)
Translates to: SLGLRQEGGARHRGACAYSSCRM*VLGTKL
Trigger: CAGTTTGGTTCCCAGCACCCACATCCTGCAGCTTGA...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACGGTCATAAGATGCCCTaGAACTGGAGGTACAGCTGG +
Preference number: 2 (lower is better)
Translates to: SLGLRQEGGARHRGACAYGHKMP*NWRYSW
Trigger: CCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACC...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp GTCCCCTTTGGCCTGCATGTATCTGACATACTCAGCCACTCGCTGGTCTACCAGGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: VPFGLHVSDILSHSLVYQARRMA*AFWSCG
Trigger: GCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGC...CTGGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACCTGCTAAGCCAGCTCTaGAGCCCTTCAAAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: SLGLRQEGGARHRGACAYLLSQL*SPSKFQ
Trigger: TTGGAACTTTGAAGGGCTGCAGAGCTGGCTTAGCAG...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACGGTCATAAGATGCCCTaGAACTGGAGGTACAGCTGG +
Preference number: 2 (lower is better)
Translates to: VENYPRSLGLRQEGGARHGHKMP*NWRYSW
Trigger: CCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACC...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 90 bp GGGCACAGCTCCAGTTCTCCGTCTCCACACAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCATCCATCCGTAGCGGTGGCAGCGGAT +
Preference number: 2 (lower is better)
Translates to: GHSSSSPSPHNFQPV*HQVLSHPSVAVAAD
Trigger: ATCCGCTGCCACCGCTACGGATGGATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTTGTGTGGAGACGGAGAACTGGAGCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACTGTTTGCCTTCCATGTaGCCCTTACTCTGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: VENYPRSLGLRQEGGARHCLPSM*PLLWSF
Trigger: GAAGGACCAGAGTAAGGGGCACATGGAAGGCAAACA...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 90 bp TCACCCTCAGCCACACTTTCAGGACCACATTCTTTTGGCGGTTCTTaGGGCAACTCGCCCTCGATTTCCCAGAGGACGTCACCTTCGTCC +
Preference number: 2 (lower is better)
Translates to: SPSATLSGPHSFGGS*GNSPSISQRTSPSS
Trigger: GGACGAAGGTGACGTCCTCTGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAAAGTGTGGCTGAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp CTCTTCACAGAGTCAGTGGCATGGCACCGGAAGCCATTCAGGATCAGCATCCCTAACTGCTTGGCAGCCTaGCAGTTGTTGGTGCTCTCG +
Preference number: 2 (lower is better)
Translates to: LFTESVAWHRKPFRISIPNCLAA*QLLVLS
Trigger: CGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTT...AGGGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACTGCTGGGAACCAAACTaGAAGAATAGCATGCTCTTA +
Preference number: 2 (lower is better)
Translates to: SLGLRQEGGARHRGACAYCWEPN*KNSMLL
Trigger: TAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCA...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TTGTTTGACGGACACTTGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGCTGTGGGCGGTCAGGGTGCTaGCCATGGGTTAAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LFDGHLCSHPFLKIAEGCGRSGC*PWVKCW
Trigger: CCAGCACTTAACCCATGGGCAGCACCCTGACCGCCC...ACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR GCA 90 bp TCAGTGGCATGGCACCGGAAGCCATTCAGGATCAGCATCCCTCGCTGTCTGGGCGCTGTGGCTTCACTTTaGGCCAGTCTCGAACATTTT +
Preference number: 2 (lower is better)
Translates to: SVAWHRKPFRISIPRCLGAVASL*ASLEHF
Trigger: AAAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGC...GCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp CATGTTCTCCATGGAACTCTTCACAGAGTCAGTGGCATGGCACCGGAAGCCATTGATGGGCGTCTCGTCTaGATTGCCCATCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: HVLHGTLHRVSGMAPEAIDGRLV*IAHLGH
Trigger: GTGGCCCAGATGGGCAATGCAGACGAGACGCCCATC...AATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGAGTTCCATGGAGAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp TCAGGACCACATTCTTTTGGCGGTTCTTTGGGCAACTCGCCCTCGATTTCCCAGGGCAGCGGATCTCCATaGCACTGGGAAACTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SGPHSFGGSLGNSPSISQGSGSP*HWETSQ
Trigger: CTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCC...CTGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp AGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACGGTGGTGGGAGGTGGTaGGAGGTCCTTAGGCACCGC +
Preference number: 2 (lower is better)
Translates to: RSAQNTLWKRLLLPGTLHGGGRW*EVLRHR
Trigger: GCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC...GTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 90 bp TTCTCCCTGCCTGGTGTCTTGACCAAGATGGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAGGGGACTTCTAAGCAGATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: FSLPGVLTKMGFSPW*STVTLEGTSKQMGV
Trigger: GACGCCCATCTGCTTAGAAGTCCCCTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp TTCAGGACCACATTCTTTTGGCGGTTCTTTGGGCAACTCGCCCTCGATTTCCCACCCTGCCTGGTGTCTTaGCCAAGATGGGCTTTTCGC +
Preference number: 2 (lower is better)
Translates to: FRTTFFWRFFGQLALDFPPCLVS*PRWAFR
Trigger: GCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGG...TGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGTGCTGGGAACCAAACTaGAAGAATAGCATGCTCTTA +
Preference number: 2 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRCWEPN*KNSMLL
Trigger: TAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCA...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TCAGGACCACATTCTTTTGGCGGTTCTTTGGGCAACTCGCCCTCGATTTCCCAGCATAGTCGTGTGTCCTaGGCAGAGCCAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: SGPHSFGGSLGNSPSISQHSRVS*AEPAHS
Trigger: AGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG...CTGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp GCTGTCGTTCAGAGGCTTGTAGACAACGACATCCAGCACCTGCAGCTGGGAGGTAGCATTTTGGAGCTGTaGCTTCACTTTGCGCCAGTC +
Preference number: 2 (lower is better)
Translates to: AVVQRLVDNDIQHLQLGGSILEL*LHFAPV
Trigger: GACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCT...ACCTCCCAGCTGCAGGTGCTGGATGTCGTTGTCTACAAGCCTCTGAACGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp ACCCCCAGCATGGCTGTGATCCTCAATTTCTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCGCCCTGGTTGTCAACAGTCACTCTA +
Preference number: 2 (lower is better)
Translates to: TPSMAVILNFSLPGV*TKMGFSPWLSTVTL
Trigger: TAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTGAGGATCACAGCCATGCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp TCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCCACTTTCTTCTTGTTTaGCGGACACTTGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SVVRDSAPLSLALAGACLHFLLV*RTLVFS
Trigger: TGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTG...GAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR TCA 90 bp AGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCTGTCTCTGGATGTGTaGGCTGCACTGTCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: RSAQNTLWKRLLLPGTLHLSLDV*AALSGC
Trigger: GCAGCCGGACAGTGCAGCTCACACATCCAGAGACAG...GTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR GCA 90 bp ACGGTACAGAGAAAGCTAAGAGGAACAGTGTCAGTACACAGAGTTCTCAGGAGTCAGACAGGAAGGTGGTaGACGCCACCGAGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: TVQRKLRGTVSVHRVLRSQTGRW*TPPRSL
Trigger: CAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTG...ACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TTGTCAACAGTCACTCTAGAGGGGACTTCTAAGCAGATGGGCGTCTCGTCTGCACCTGACAGTTGTTGGTaGTCTCGGCGTACTCCACCA +
Preference number: 2 (lower is better)
Translates to: LSTVTLEGTSKQMGVSSAPDSCW*SRRTPP
Trigger: TGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGG...TGCAGACGAGACGCCCATCTGCTTAGAAGTCCCCTCTAGAGTGACTGTTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAACTTCATTCTCTCCCTaGGCCAGGGTCCTGCAGATC +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPTSFSP*ARVLQI
Trigger: GATCTGCAGGACCCTGGCCCAGGGAGAGAATGAAGT...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATGGTCATAAGATGCCCTaGAACTGGAGGTACAGCTGG +
Preference number: 2 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHGHKMP*NWRYSW
Trigger: CCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACC...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAGAGTAGGGGCATGTaGAGAACTATCCCCGAAGCC +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPESRGM*RTIPEA
Trigger: GGCTTCGGGGATAGTTCTCCACATGCCCCTACTCTC...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACAGTGGTGGTGGGAGGTaGTGGGAGGTCCTTAGGCAC +
Preference number: 2 (lower is better)
Translates to: RSAQNTLWKRLLLPGTLHSGGGR*WEVLRH
Trigger: GTGCCTAAGGACCTCCCACCACCTCCCACCACCACT...GTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 90 bp TCAAGAGCTTTCAACTGCATTGCCTCCCTAGTGATAGGGTCCCCTTaGGCCTGCATGTATCTGACATACTCAGCCACTCGCTGGTCTACC +
Preference number: 2 (lower is better)
Translates to: SRAFNCIASLVIGSP*ACMYLTYSATRWST
Trigger: GGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp CTGCTGGTAAGTGACAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTaGAGGGACTGGCACTTTATGCCTCAGAGACAGGTCATACCTTCT +
Preference number: 2 (lower is better)
Translates to: LLVSDKLFSQVLGQV*RDWHFMPQRQVIPS
Trigger: AGAAGGTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACTTACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACTATTTCAAGAGAACGTaGAAAGAACAAACTCAGGGC +
Preference number: 2 (lower is better)
Translates to: VENYPRSLGLRQEGGARHYFKRT*KEQTQG
Trigger: GCCCTGAGTTTGTTCTTTTCACGTTCTCTTGAAATA...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATCCTAGGACACAGAGATaGGGCCTAGAGGTTACCATA +
Preference number: 2 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHPRTQR*GLEVTI
Trigger: TATGGTAACCTCTAGGCCTCATCTCTGTGTCCTAGG...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp ATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCCGTTCTCACCCTTTCCTaGAGATCGCAGAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ISTKHSLEKAAPSWYTAPVLTLS*RSQRAV
Trigger: CACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAAC...GGGTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR GCA 90 bp GGAAGCCATTCAGGATCAGCATCCCTCGCTGTCTGGGCACAGCTCCAGTTCTCCTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATA +
Preference number: 2 (lower is better)
Translates to: GSHSGSASLAVWAQLQFSSRAFN*IASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA...GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTCTTAGGTCTCAGTGGTaGTGGGAGGTGGTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTLRSQW*WEVVGG
Trigger: ACCTCCCACCACCTCCCACCACCACTGAGACCTAAG...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: GLSDKVFMLSTPRILREPGMPAA*HEHFGA
Trigger: AGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCC...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp TGGGATGATCACCATGTCCGTGTTCATGTTCTCCATGGAACTCTTCACAGAGTCCAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCC +
Preference number: 2 (lower is better)
Translates to: WDDHHVRVHVLHGTLHRVQTFHS*GLGMPA
Trigger: GGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTG...GACTCTGTGAAGAGTTCCATGGAGAACATGAACACGGACATGGTGATCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp AATCCACAGGAGCCGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTCAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGG +
Preference number: 2 (lower is better)
Translates to: NPQEPSRGRNCDHSNLVAQFLPA*CLDQDG
Trigger: CCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTG...AGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp AACTCGCCCTCGATTTCCCAGAGGACGTCACCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTTCTGAACCCCTGGACAATTGATTCA +
Preference number: 2 (lower is better)
Translates to: NSPSISQRTSPSSSK*LEMWHFLNPWTIDS
Trigger: TGAATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGGTGACGTCCTCTGGGAAATCGAGGGCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATATCTCATTCCCTCAGTaGGGAGACATGGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHISFPQ*GDMEVA
Trigger: TGCTACTTCCATGTCTCCTCACTGAGGGAATGAGAT...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCTACAGGTGTCAAGCTaGAGGATGTGGGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSELQVSS*RMWVLG
Trigger: TCCCAGCACCCACATCCTGCAGCTTGACACCTGTAG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCA +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPGSPLA*MYLTYS
Trigger: TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTACTTCATTCTCTCCCTaGGCCAGGGTCCTGCAGATC +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASTSFSP*ARVLQI
Trigger: GATCTGCAGGACCCTGGCCCAGGGAGAGAATGAAGT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCAGGGCCTTTGCTAGTGTaGGCTCTGATCGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPGPLLV*ALIACF
Trigger: AAAGCAGGCGATCAGAGCCCACACTAGCAAAGGCCC...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAATGTGCCCCTTACTCTaGTCCTTCTCCTGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPMCPLL*SFSCLL
Trigger: GAGCAAACAGGAGAAGGACCAGAGTAAGGGGCACAT...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGGAGAGTAGGGGCATGTaGAGAACTATCCCCGAAGCC +
Preference number: 2 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLESRGM*RTIPEA
Trigger: GGCTTCGGGGATAGTTCTCCACATGCCCCTACTCTC...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCTGGAAGAGCAGACGTaGCATGTACCCATGTGCACA +
Preference number: 2 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRLEEQT*HVPMCT
Trigger: TGTGCACATGGGTACATGCCACGTCTGCTCTTCCAG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCTGGAGCCTGTCTCTaGATGTGTGAGCTGCACTGT +
Preference number: 2 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTAGACL*MCELHC
Trigger: ACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGC...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR-3UTR CCA 90 bp TTCAGGACCACATTCTTTTGGCGGTTCTTTGGGCAACTCGCCCTCGATTTCCCATACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTT +
Preference number: 2 (lower is better)
Translates to: FRTTFFWRFFGQLALDFPYSATR*STRANL
Trigger: AAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTA...TGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGTGGCCTGCATGTATCTaGCATACTCAGCCACTCGCT +
Preference number: 2 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEWPACI*HTQPLA
Trigger: AGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCA...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCACCTGCATCATATGTATaGAGGACCTGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPPASYV*RTWQRP
Trigger: TGGCCTCTGCCAGGTCCTGCATACATATGATGCAGG...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCCCTGCATCATATGTATaGAGGACCTGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCPASYV*RTWQRP
Trigger: TGGCCTCTGCCAGGTCCTGCATACATATGATGCAGG...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCTCCAACTCAAAGTCTaGTATCCAACAGGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASLQLKV*YPTGAA
Trigger: CGCTGCCCCTGTTGGATAGCAGACTTTGAGTTGGAG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCACCATTTTGGTCCCTCTaGAGCCATCCTCTTACAAGT +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPPFWSL*SHPLTS
Trigger: ACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGG...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTATGTATGCAGGACCTaGCAGAGGCCAGAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASYVCRT*QRPEEV
Trigger: GACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATA...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCGGGCCTTTGCTAGTGTaGGCTCTGATCGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVGPLLV*ALIACF
Trigger: AAAGCAGGCGATCAGAGCCCACACTAGCAAAGGCCC...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCTCACGGTCATGTGTGTaGAACTCTGACAGACTGCGC +
Preference number: 2 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAASRSCV*NSDRLR
Trigger: GCGCAGTCTGTCAGAGTTCCACACACATGACCGTGA...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: GLSDKVFMLSTPRILREPQVLRD*HFMPQR
Trigger: TCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGTCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLSSQSQ*HGTGSH
Trigger: ATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGA...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGG +
Preference number: 2 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNKLLEM*HFLNPW
Trigger: CCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTT...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp CTGCTGCTGTATAAAGAACCCCTTGCTGCCCAGGATGTGGGTATGTaGTATACTCTCCTGAATTCAGAGAGGCAGTTAGGAGTGGCAACT +
Preference number: 2 (lower is better)
Translates to: LLLYKEPLAAQDVGM*YTLLNSERQLGVAT
Trigger: AGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAGAGTATACAACATACCCACATCCTGGGCAGCAAGGGGTTCTTTATACAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTGAGCTGTTATACAGGTaGTGGAAACTAAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCELLYR*WKLNAS
Trigger: ACTGGCATTTAGTTTCCAGCACCTGTATAACAGCTC...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp ACGGTACAGAGAAAGCTAAGAGGAACAGTGTCAGTACACAGAGTTCTCAGGAGTCCTGCATCATATGTATaGAGGACCTGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: TVQRKLRGTVSVHRVLRSPASYV*RTWQRP
Trigger: TGGCCTCTGCCAGGTCCTGCATACATATGATGCAGG...ACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTTGTGCACCAAGGGCTaGCTCATAGAGGACAACAGA +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASLCTKG*LIEDNR
Trigger: TCTGTTGTCCTCTATGAGGCAGCCCTTGGTGCACAA...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TGGGATGATCACCATGTCCGTGTTCATGTTCTCCATGGAACTCTTCACAGAGTCGGGACTGGCACTTTATaGCTCAGAGACAGGTCATAC +
Preference number: 2 (lower is better)
Translates to: WDDHHVRVHVLHGTLHRVGTGTL*LRDRSY
Trigger: GTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCC...GACTCTGTGAAGAGTTCCATGGAGAACATGAACACGGACATGGTGATCATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGACCTTCAGATACCTGCTaGCAACAGGAATTGACTGTA +
Preference number: 2 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGPSDTC*QQELTV
Trigger: TACAGTCAATTCCTGTTGCCAGCAGGTATCTGAAGG...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCTATGTATGCAGGACCTaGCAGAGGCCAGAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVYVCRT*QRPEEV
Trigger: GACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATA...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCACAGCTCAGGGGCATaGGGATTTCTACTAGCATTT +
Preference number: 2 (lower is better)
Translates to: GLSDKVFMLSTPRILREPHSSGA*GFLLAF
Trigger: AAATGCTAGTAGAAATCCCCATGCCCCTGAGCTGTG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCCATGTGCACAGCTGTaGCTTAGCATGGTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: THTLTHTRCENVFSRKHLPCAQL*LSMVFC
Trigger: GCAGAAAACCATGCTAAGCCACAGCTGTGCACATGG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CCTGAGTTCCAGGGATTGGACTCATTCAGTAAGGCTTGCTTGCCAATTATCTGCCCATGTGCACAGCTGTaGCTTAGCATGGTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: PEFQGLDSFSKACLPIICPCAQL*LSMVFC
Trigger: GCAGAAAACCATGCTAAGCCACAGCTGTGCACATGG...GCAGATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR CCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAAAAGATCCTAACAACTaGAAGAGCAGACGTGGCATG +
Preference number: 2 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPKDPNN*KSRRGM
Trigger: CATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTT...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp ACGGTACAGAGAAAGCTAAGAGGAACAGTGTCAGTACACAGAGTTCTCAGGAGTACACCCCAAACTGCTTaGCAGCCTGACAGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: TVQRKLRGTVSVHRVLRSTPQTA*QPDSCW
Trigger: CCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGT...ACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAGTCTCACCCCATAACTaGATTTCTATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGVSPHN*ISMRPR
Trigger: TCTTGGTCTCATAGAAATTCAGTTATGGGGTGAGAC...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCAAGTCCTCTGCAAGGATaGAAGGTAAGCACTCCTAAC +
Preference number: 2 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPSPLQG*KVSTPN
Trigger: GTTAGGAGTGCTTACCTTTCATCCTTGCAGAGGACT...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp CCTGAGTTCCAGGGATTGGACTCATTCAGTAAGGCTTGCTTGCCAATTATCTGCAGTCCTCTGCAAGGATaGAAGGTAAGCACTCCTAAC +
Preference number: 2 (lower is better)
Translates to: PEFQGLDSFSKACLPIICSPLQG*KVSTPN
Trigger: GTTAGGAGTGCTTACCTTTCATCCTTGCAGAGGACT...GCAGATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR TCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGAGTCCTCTGCAAGGATaGAAGGTAAGCACTCCTAAC +
Preference number: 2 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLSPLQG*KVSTPN
Trigger: GTTAGGAGTGCTTACCTTTCATCCTTGCAGAGGACT...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCATCTCATTCCCTCAGTaGGGAGACATGGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAAISFPQ*GDMEVA
Trigger: TGCTACTTCCATGTCTCCTCACTGAGGGAATGAGAT...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: THTLTHTRCENVFSRKHLHSAGK*QAFQSG
Trigger: ACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTAAGTTGCTCTTCTTCTaGACACCTCCTCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASKLLFF*TPPQLP
Trigger: AGGGAGTTGAGGAGGTGTGCAGAAGAAGAGCAACTT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCCATTTTCCTGCTGTTTaGCTTCCATGTGCCCCTTAC +
Preference number: 2 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAAHFPAV*LPCAPY
Trigger: GTAAGGGGCACATGGAAGGCAAACAGCAGGAAAATG...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCACAGCTCAGGGGCATaGGGATTTCTACTAGCATTT +
Preference number: 2 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLHSSGA*GFLLAF
Trigger: AAATGCTAGTAGAAATCCCCATGCCCCTGAGCTGTG...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAGCTCAGACAGGAAGGTaGTGCACGCCACCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLAQTGR*CTPPRS
Trigger: GCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGC...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTACAGAGTCAGTGGCATaGCACCGGAAGCCATTCAGG +
Preference number: 2 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFTESVA*HRKPFR
Trigger: CCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGT...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp AGGTCATACCTTCTCATCATTCTTCGACACCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATGTTCATTTCCTGGGCGATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: RSYLLIILRHQPRLA*NPFSGMFISWAISR
Trigger: TCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATGAGAAGGTATGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR TCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGATATTTCAAGAGAACGTaGAAAGAACAAACTCAGGGC +
Preference number: 2 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGYFKRT*KEQTQG
Trigger: GCCCTGAGTTTGTTCTTTTCACGTTCTCTTGAAATA...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTAAAACAGAGAGAACCTaGGTAGGAATCAGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: GLSDKVFMLSTPRILREPKTERT*VGISLD
Trigger: ATCCAGACTGATTCCTACTCAGGTTCTCTCTGTTTT...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCATGTTCCCCTCAAAATaGTGTACGGTGGTAACTTCC +
Preference number: 2 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCMFPSK*CTVVTS
Trigger: GGAAGTTACCACCGTACATCATTTTGAGGGGAACAT...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGACTTCCAACCAGTCTTaGATCAAGTCCTCAGTCATC +
Preference number: 2 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSETSNQS*IKSSVI
Trigger: GATGACTGAGGACTTGATGCAAGACTGGTTGGAAGT...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTC +
Preference number: 2 (lower is better)
Translates to: GLSDKVFMLSTPRILREPGMFIS*AISRAF
Trigger: GAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCC...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp CTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTaGACAAAAATATTAAAGAAATTAACCAAGTCAGTGGGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: LTAAVAYGPNPPIAL*TKILKKLTKSVGPV
Trigger: AACAGGGCCCACTGACTTGGTTAATTTCTTTAATATTTTTGTCAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGGTCTCACCCCATAACTaGATTTCTATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEVSPHN*ISMRPR
Trigger: TCTTGGTCTCATAGAAATTCAGTTATGGGGTGAGAC...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTAGCAGAAAGGGAGCCTaGATCCAAGGCTTTACAGAG +
Preference number: 2 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFSRKGA*IQGFTE
Trigger: CTCTGTAAAGCCTTGGATTCAGGCTCCCTTTCTGCT...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGAAAACAGAGAGAACCTaGGTAGGAATCAGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLKTERT*VGISLD
Trigger: ATCCAGACTGATTCCTACTCAGGTTCTCTCTGTTTT...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGCTGGGAACCAAACTaGAAGAATAGCATGCTCTTA +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASCWEPN*KNSMLL
Trigger: TAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCA...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGAGCTGTTATACAGGTaGTGGAAACTAAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCELLYR*WKLNAS
Trigger: ACTGGCATTTAGTTTCCAGCACCTGTATAACAGCTC...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTTGTTTGCCTTCCATGTaGCCCTTACTCTGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFCLPSM*PLLWSF
Trigger: GAAGGACCAGAGTAAGGGGCACATGGAAGGCAAACA...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCACTCCAACTCAAAGTCTaGTATCCAACAGGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSLQLKV*YPTGAA
Trigger: CGCTGCCCCTGTTGGATAGCAGACTTTGAGTTGGAG...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCCCAAACCCTCCCATTaGCCTTTTGACAAAAATATT +
Preference number: 2 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRPKPSH*PFDKNI
Trigger: AATATTTTTGTCAAAAGGGCAATGGGAGGGTTTGGG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGTGTTCATGTTCTCCATaGAACTCTTCACAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSECSCSP*NSSQSQ
Trigger: CTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 90 bp AGTTGCTCTTCTTCTGCACACCTCCTCAACTCCCTACATGTACACTaGATGACCTTAGGCTCGCGAACTGTATTCATTGTACTATTTCTG +
Preference number: 2 (lower is better)
Translates to: SCSSSAHLLNSLHVH*MTLGSRTVFIVLFL
Trigger: CAGAAATAGTACAATGAATACAGTTCGCGAGCCTAAGGTCATCAAGTGTACATGTAGGGAGTTGAGGAGGTGTGCAGAAGAAGAGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp ACGGTACAGAGAAAGCTAAGAGGAACAGTGTCAGTACACAGAGTTCTCAGGAGTAAAACAGAGAGAACCTaGGTAGGAATCAGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: TVQRKLRGTVSVHRVLRSKTERT*VGISLD
Trigger: ATCCAGACTGATTCCTACTCAGGTTCTCTCTGTTTT...ACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTAGGAGCAGGAGAACCTaGGTAGAAACTGGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: LSKFITGISFYLGSASPSRSRRT*VETGED
Trigger: ATCTTCCCCAGTTTCTACTCAGGTTCTCCTGCTCCT...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp GTGTCCCCACGTATAGGAGCACTCATTGGTCTGTGTCTGAGTAGGGATCTTAAGTACAACTTGGCACATTaGATCATCTGTATTTCATCC +
Preference number: 2 (lower is better)
Translates to: VSPRIGALIGLCLSRDLKYNLAH*IICISS
Trigger: GGATGAAATACAGATGATTCAATGTGCCAAGTTGTA...CTTAAGATCCCTACTCAGACACAGACCAATGAGTGCTCCTATACGTGGGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAGAGAGTAGGGGCATGTaGAGAACTATCCCCGAAGCC +
Preference number: 2 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLESRGM*RTIPEA
Trigger: GGCTTCGGGGATAGTTCTCCACATGCCCCTACTCTC...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTCCATGTGCACAGCTGTaGCTTAGCATGGTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LSKFITGISFYLGSASPSPCAQL*LSMVFC
Trigger: GCAGAAAACCATGCTAAGCCACAGCTGTGCACATGG...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp ACGGTACAGAGAAAGCTAAGAGGAACAGTGTCAGTACACAGAGTTCTCAGGAGTATACCTACTCTTGTATaGTTGGAGTCTAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TVQRKLRGTVSVHRVLRSIPTLV*LESNSS
Trigger: GCTGCTGTTAGACTCCAACCATACAAGAGTAGGTAT...ACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp CCTGAGTTCCAGGGATTGGACTCATTCAGTAAGGCTTGCTTGCCAATTATCTGCGAGGTTAAAAGGATTTaGAGTGATGGATACACACTG +
Preference number: 2 (lower is better)
Translates to: PEFQGLDSFSKACLPIICEVKRI*SDGYTL
Trigger: CAGTGTGTATCCATCACTCCAAATCCTTTTAACCTC...GCAGATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR TCA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCATACCATACTAAAGGCTaGCTTCATTCTCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSYHTKG*LHSLPG
Trigger: CCCAGGGAGAGAATGAAGTCAGCCTTTAGTATGGTA...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTATCTCATTCCCTCAGTaGGGAGACATGGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: LSKFITGISFYLGSASPSISFPQ*GDMEVA
Trigger: TGCTACTTCCATGTCTCCTCACTGAGGGAATGAGAT...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGAGATGTGGCACTTTCTaGACCCCTGGACAATTGATT +
Preference number: 2 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLRCGTF*TPGQLI
Trigger: AATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCT...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR GCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTCTGATAAGGTATTCATaGTGTCCACCCCTAGGATTC +
Preference number: 2 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFLIRYS*CPPLGF
Trigger: GAATCCTAGGGGTGGACAGCATGAATACCTTATCAG...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTAGTCATGAGTCTATGTaGAATCTCCTACAATTAGGA +
Preference number: 2 (lower is better)
Translates to: APDLSCFRFTLGSVFHASSHESM*NLLQLG
Trigger: TCCTAATTGTAGGAGATTGCACATAGACTCATGACT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAGTCTCACCCCATAACTaGATTTCTATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLVSPHN*ISMRPR
Trigger: TCTTGGTCTCATAGAAATTCAGTTATGGGGTGAGAC...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAGAGCTGTTATACAGGTaGTGGAAACTAAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLELLYR*WKLNAS
Trigger: ACTGGCATTTAGTTTCCAGCACCTGTATAACAGCTC...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 90 bp GTGAGCAGACAGCCCTGCCCTGAAGTTCAGCATTTTAGAAGAAAGTaGTCTCTTCAACCTTTTTGTGAACTAAACAATGTCGAACTATGT +
Preference number: 2 (lower is better)
Translates to: VSRQPCPEVQHFRRK*SLQPFCELNNVELC
Trigger: ACATAGTTCGACATTGTTTAGTTCACAAAAAGGTTGAAGAGACAACTTTCTTCTAAAATGCTGAACTTCAGGGCAGGGCTGTCTGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR TCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGTATTTCAAGAGAACGTaGAAAGAACAAACTCAGGGC +
Preference number: 2 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLYFKRT*KEQTQG
Trigger: GCCCTGAGTTTGTTCTTTTCACGTTCTCTTGAAATA...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR GCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAAAGTTGCTCTTCTTCTaGACACCTCCTCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLKLLFF*TPPQLP
Trigger: AGGGAGTTGAGGAGGTGTGCAGAAGAAGAGCAACTT...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTGCGCAGGTTTATGACTaGTTACACAGTGAGAAATCA +
Preference number: 2 (lower is better)
Translates to: LSKFITGISFYLGSASPSAQVYD*LHSEKS
Trigger: TGATTTCTCACTGTGTAACCAGTCATAAACCTGCGC...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACCTTCAGATACCTGCTaGCAACAGGAATTGACTGTA +
Preference number: 2 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLPSDTC*QQELTV
Trigger: TACAGTCAATTCCTGTTGCCAGCAGGTATCTGAAGG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 90 bp CAGATTGGAAAGGTATCTGCAACATCATTTATCTTAGTCTTTATCTaGCATCCTAACCTAGTTTACCTACAGAAAATCCATCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: QIGKVSATSFILVFI*HPNLVYLQKIHLLH
Trigger: GTGCAGAAGATGGATTTTCTGTAGGTAAACTAGGTTAGGATGCAAGATAAAGACTAAGATAAATGATGTTGCAGATACCTTTCCAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR CCA 72 bp AGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTaGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTG +
Preference number: 3 (lower is better)
Translates to: SAGVLGLSGGGR*WEVLRHRSGHL
Trigger: CAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR TCA 72 bp GTCCCTCGCCCTGGCTGGAGCCTGTCTCTGGATGTGTaGGCTGCACTGTCCGGCTGCCTTATTACCCCGTGT +
Preference number: 3 (lower is better)
Translates to: VPRPGWSLSLDV*AALSGCLITPC
Trigger: ACACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR GCA 72 bp CTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTaGACGCCACCGAGGAGCCTGCGCTTACACAGCTCA +
Preference number: 3 (lower is better)
Translates to: LSPKPRAQTGRW*TPPRSLRLHSS
Trigger: TGAGCTGTGTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp CTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTaGGCTTACACAGCTCAGGGGCATGGGGATTTCTAC +
Preference number: 3 (lower is better)
Translates to: LRQEGGARHRGA*AYTAQGHGDFY
Trigger: GTAGAAATCCCCATGCCCCTGAGCTGTGTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp TGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTaGTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: WLGRSGCCPWVK*WGLRSQWWWEV
Trigger: CACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp GCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCTaGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTA +
Preference number: 3 (lower is better)
Translates to: APLSLALAGACL*MCELHCPAALL
Trigger: TAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR TCA 72 bp CCATTCTTGGGGCCTCGGAATGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGCTTCACTTTGCGCCAG +
Preference number: 3 (lower is better)
Translates to: PFLGPRNARRMA*AFWSCGFTLRQ
Trigger: CTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp TCGCCCTGGCTGGAGCCTGTCTCTGGATGTGTGAGCTaGACTGTCCGGCTGCCTTATTACCCCGTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SPWLEPVSGCVS*TVRLPYYPVSF
Trigger: AAAGGACACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp CTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTaGCTGGAGCCTGTCTCTGGATGTGTGAGCTGCACT +
Preference number: 3 (lower is better)
Translates to: LLLGTVPHCPSP*LEPVSGCVSCT
Trigger: AGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp CCACTCGCTGGTCTACCAGAGCAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCCGCATGGCATGAGCAT +
Preference number: 3 (lower is better)
Translates to: PLAGLPEQTFHS*GLGMPAAWHEH
Trigger: ATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACCCATTTTCCTGCTGTTaGCCTTCCATGTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: SLGLRQEGGARHRGACAYPFSCC*PSMCPL
Trigger: TAAGGGGCACATGGAAGGCAAACAGCAGGAAAATGG...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp CATGCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTaGCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: HALCCWLGRSGC*PWVKCWGLRSQ
Trigger: CTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp GACATCCAGCACCTGCAGCTGGGAGGTCAGGCCCCCTaGGATGATCACCATGTCCGTGTTCATGTTCTCCAT +
Preference number: 3 (lower is better)
Translates to: DIQHLQLGGQAP*DDHHVRVHVLH
Trigger: ATGGAGAACATGAACACGGACATGGTGATCATCCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 72 bp AACAGGGGCAGCGGAGTGGTCAGCAGAAAGGGAGCCTaGATCCAAGGCTTTACAGAGAGTAGGGGCATGTGG +
Preference number: 3 (lower is better)
Translates to: NRGSGVVSRKGA*IQGFTESRGMW
Trigger: CCACATGCCCCTACTCTCTGTAAAGCCTTGGATTCAGGCTCCCTTTCTGCTGACCACTCCGCTGCCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 72 bp GTGTCCTGCGCAGAGCCAGCACACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: VSCAEPAHSAGK*QAFQSGPRPGV
Trigger: AACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTGTGCTGGCTCTGCGCAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp TGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATaGCCTGGAACTGGAGGTACAGCTGGTTGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: CRTWQRPEEVIR*PGTGGTAGCEL
Trigger: CAGCTCACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp TACCAGAGCAAACCTTCCATTCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGCATTTTGGAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: YQSKPSILGASE*PPHGMSILELW
Trigger: CCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp AGGGGACTTCTAAGCAGATGGGCGTCTCGTCTGCATTaGCCATCTGGGCCACTTCATAGTCGTGTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: RGLLSRWASRLH*PSGPLHSRVSC
Trigger: GCAGGACACACGACTATGAAGTGGCCCAGATGGGCAATGCAGACGAGACGCCCATCTGCTTAGAAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp TTCCTGTCTAGAGCACCTGTGCATGCTCTGTGCTGTTaGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: FLSRAPVHALCC*LGRSGCCPWVK
Trigger: CTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGGTGCTCTAGACAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp ACCTTCCATTCTTGGGGCCTCGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCTGTGGCTTCACTTTGC +
Preference number: 3 (lower is better)
Translates to: TFHSWGLGMPAA*HEHFGAVASLC
Trigger: GCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp ACCGGAAGCCATTCAGGATCAGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCCGTCTCCACACAACTT +
Preference number: 3 (lower is better)
Translates to: TGSHSGSASLAV*AQLQFSVSTQL
Trigger: AAGTTGTGTGGAGACGGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp CCCCAGCATGGCTGTGATCCTCAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGGCTTTTCGCCCTGGTT +
Preference number: 3 (lower is better)
Translates to: PQHGCDPQFLPA*CLDQDGLFALV
Trigger: AACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTGAGGATCACAGCCATGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAG +
Preference number: 3 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLGFSPW*STVTLE
Trigger: CTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCC...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 72 bp GTGACAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTTaGGGGACTGGCACTTTATGCCTCAGAGACAGGTCA +
Preference number: 3 (lower is better)
Translates to: VTSFSVRSSARC*GTGTLCLRDRS
Trigger: TGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp TGCATTGCCTCCCTAGTGATAGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCAGCCACTCGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: CIASLVIGSPLA*MYLTYSATRWS
Trigger: AGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp ATGTTCTCCATGGAACTCTTCACAGAGTCAGTGGCATaGCACCGGAAGCCATTCAGGATCAGCATCCCTCGC +
Preference number: 3 (lower is better)
Translates to: MFSMELFTESVA*HRKPFRISIPR
Trigger: GCGAGGGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGAGTTCCATGGAGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGCTGTTTGCTCAAAGTTaGTGTTTAGGGGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLLFAQS*CLGALG
Trigger: GCCCAGAGCCCCTAAACACAAACTTTGAGCAAACAG...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCCAGCCAGAAGCCAGTaGGAATACTGGGCCCGAACG +
Preference number: 3 (lower is better)
Translates to: THTLTHTRCENVFSRKHLPARSQ*EYWART
Trigger: CGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp ATTGGACTCCTGAAACCGGAGCTACAGGTGTCAAGCTaGAGGATGTGGGTGCTGGGAACCAAACTGCAAGAA +
Preference number: 3 (lower is better)
Translates to: IGLLKPELQVSS*RMWVLGTKLQE
Trigger: TTCTTGCAGTTTGGTTCCCAGCACCCACATCCTGCAGCTTGACACCTGTAGCTCCGGTTTCAGGAGTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp ATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCATTaGCCATTTTGGTCCCTCTGCAGCCATCCTCTTACA +
Preference number: 3 (lower is better)
Translates to: MLSTPRILREPH*PFWSLCSHPLT
Trigger: TGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR GCA 72 bp TCAGAGAGGCAGTTAGGAGTGGCAACTGGTCTTGGCTaGCCCCAGCAATGGAGAATTCCAAAAGGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: SERQLGVATGLG*PQQWRIPKGVA
Trigger: TGCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp TTGGCCTGCATGTATCTGACATACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTTCCATTCTTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: LACMYLTYSATR*STRANLPFLGP
Trigger: AGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp CTTTTCAGTCAGGTCCTCGGCCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGACAGGTCATACCTTCT +
Preference number: 3 (lower is better)
Translates to: LFSQVLGQVLRD*HFMPQRQVIPS
Trigger: AGAAGGTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp CTGCCTGGTGTCTTGACCAAGATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTAGAGGGGACTTCTAAG +
Preference number: 3 (lower is better)
Translates to: LPGVLTKMGFSP*LSTVTLEGTSK
Trigger: CTTAGAAGTCCCCTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCATGCTGGCAACAGGAATaGACTGTAACGTCTCACCCC +
Preference number: 3 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPCWQQE*TVTSHP
Trigger: GGGGTGAGACGTTACAGTCAATTCCTGTTGCCAGCA...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCTGAAAAGCAAAGGCTaGTGCACCAAGGGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRLKSKG*CTKGCL
Trigger: GAGGCAGCCCTTGGTGCACAAGCCTTTGCTTTTCAG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTTCAGTCCGGTGTCTGTaGTTAGGGACAGTGCCCCAT +
Preference number: 3 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTSVRCL*LGTVPH
Trigger: ATGGGGCACTGTCCCTAACAACAGACACCGGACTGA...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR TCA 72 bp TCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCCTaGAGATCGCAGAGGGCTGTGTGTCGTCTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: SCLTDTCVLTLS*RSQRAVCRLLS
Trigger: ACTGAGGAGACGACACACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR GCA 72 bp AACCGGAGCTACAGGTGTCAAGCTGCAGGATGTGGGTaGTGGGAACCAAACTGCAAGAATAGCATGCTCTTA +
Preference number: 3 (lower is better)
Translates to: NRSYRCQAAGCG*WEPNCKNSMLL
Trigger: TAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCACCCACATCCTGCAGCTTGACACCTGTAGCTCCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp GCGTGTTTGGCCACAGGTGACTACACACCAACGGTCTaGCTTTACCAGGCACATACCTTAGTCATTCACTGT +
Preference number: 3 (lower is better)
Translates to: ACLATGDYTPTV*LYQAHTLVIHC
Trigger: ACAGTGAATGACTAAGGTATGTGCCTGGTAAAGGCAGACCGTTGGTGTGTAGTCACCTGTGGCCAAACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp CACTTCCCCCAGAAGCTGTACAAAGATCCTAACAACTaGAAGAGCAGACGTGGCATGTACCCATGTGCACAG +
Preference number: 3 (lower is better)
Translates to: HFPQKLYKDPNN*KSRRGMYPCAQ
Trigger: CTGTGCACATGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTGGGGGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp TTAGGAGTGGCAACTGGTCTTGGCTGCCCCCAGCAATaGAGAATTCCAAAAGGTGTAGCAGAGCATGCTCTA +
Preference number: 3 (lower is better)
Translates to: LGVATGLGCPQQ*RIPKGVAEHAL
Trigger: TAGAGCATGCTCTGCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp GAATTCAGAGAGGCAGTTAGGAGTGGCAACTGGTCTTaGCTGCCCCCAGCAATGGAGAATTCCAAAAGGTGT +
Preference number: 3 (lower is better)
Translates to: EFREAVRSGNWS*LPPAMENSKRC
Trigger: ACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp TCTCCTGAATTCAGAGAGGCAGTTAGGAGTGGCAACTaGTCTTGGCTGCCCCCAGCAATGGAGAATTCCAAA +
Preference number: 3 (lower is better)
Translates to: SPEFREAVRSGN*SWLPPAMENSK
Trigger: TTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp TGTTCATGTTCTCCATGGAACTCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCATTCAGGATCAGCATCC +
Preference number: 3 (lower is better)
Translates to: CSCSPWNSSQSQ*HGTGSHSGSAS
Trigger: GGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGAGGCCTAAGAAACTaGGCAGTGGGACTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSERGLRN*AVGLLS
Trigger: TGAGAGCAGTCCCACTGCCAAGTTTCTTAGGCCTCT...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCTGTTTGCTCAAAGTTaGTGTTTAGGGGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: GLSDKVFMLSTPRILREPLFAQS*CLGALG
Trigger: GCCCAGAGCCCCTAAACACAAACTTTGAGCAAACAG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp GTGTCCCCACGTATAGGAGCACTCATTGGTCTGTGTCTGAGTAGGGATCTTAAGCCATTTTCCTGCTGTTaGCCTTCCATGTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: VSPRIGALIGLCLSRDLKPFSCC*PSMCPL
Trigger: TAAGGGGCACATGGAAGGCAAACAGCAGGAAAATGG...CTTAAGATCCCTACTCAGACACAGACCAATGAGTGCTCCTATACGTGGGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR CAA 90 bp TGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCAGCTGTGGCTTCACTTaGCGCCAGTCTCGAACATTT +
Preference number: 3 (lower is better)
Translates to: WDCLIRYSCCPPLGFSESSCGFT*RQSRTF
Trigger: AAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCT...GCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATG +
Preference number: 3 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCQPRLA*NPFSGM
Trigger: CATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR GCA 72 bp ACAAATCTGTTTCTGATGGAGAAAGTGCTGATGACCTaGCTGCCGTCTACACTGTGGCACGGCAGGCTTATT +
Preference number: 3 (lower is better)
Translates to: TNLFLMEKVLMT*LPSTLWHGRLI
Trigger: AATAAGCCTGCCGTGCCACAGTGTAGACGGCAGGCAGGTCATCAGCACTTTCTCCATCAGAAACAGATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp TGTCAAGCTGCAGGATGTGGGTGCTGGGAACCAAACTaGAAGAATAGCATGCTCTTAACTGCTAAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: CQAAGCGCWEPN*KNSMLLTAKPA
Trigger: AGCTGGCTTAGCAGTTAAGAGCATGCTATTCTTGCAGTTTGGTTCCCAGCACCCACATCCTGCAGCTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp GGACGTGGTAGATGGGACTGTCTGATAAGGTATTCATaGTGTCCACCCCTAGGATTCTCAGAGAGCCTCATT +
Preference number: 3 (lower is better)
Translates to: GRGRWDCLIRYS*CPPLGFSESLI
Trigger: AATGAGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCTACCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR GCA 72 bp ATGTTCATTTCCTGGGCGATTTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATAGGGTCCCCTTTGGCC +
Preference number: 3 (lower is better)
Translates to: MFISWAISRAFN*IASLVIGSPLA
Trigger: GGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp TGTAACTGCAGATGTCAAAGGAGGCTAAGAGGTCATTaGACTCCTGAAACCGGAGCTACAGGTGTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: CNCRCQRRLRGH*TPETGATGVKL
Trigger: CAGCTTGACACCTGTAGCTCCGGTTTCAGGAGTCCAATGACCTCTTAGCCTCCTTTGACATCTGCAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp TATATGTGTGAGCCTGCATCATATGTATGCAGGACCTaGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: YMCEPASYVCRT*QRPEEVIRCPG
Trigger: TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGATGCAGGCTCACACATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp AGATCAGCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTGCAGAGGCCTAAGAAACTaGGCAGTGGGACTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: RSAKGSATMLSNVSRQPCRGLRN*AVGLLS
Trigger: TGAGAGCAGTCCCACTGCCAAGTTTCTTAGGCCTCT...GCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCCATTTTCCTGCTGTTaGCCTTCCATGTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: THTLTHTRCENVFSRKHLPFSCC*PSMCPL
Trigger: TAAGGGGCACATGGAAGGCAAACAGCAGGAAAATGG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATAAGCCTGTGTCCCACTaGGTTATTAACATCTCATTC +
Preference number: 3 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHKPVSH*VINISF
Trigger: GAATGAGATGTTAATAACCAAGTGGGACACAGGCTT...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCCCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTT +
Preference number: 3 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCPSSSK*LEMWHF
Trigger: AAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 72 bp AGGCCTAAGAAACTTGGCAGTGGGACTGCTCTCATGTaGGGTGTTCTGACAGACAGCTCCTTGTTCATCTTA +
Preference number: 3 (lower is better)
Translates to: RPKKLGSGTALM*GVLTDSSLFIL
Trigger: TAAGATGAACAAGGAGCTGTCTGTCAGAACACCTCACATGAGAGCAGTCCCACTGCCAAGTTTCTTAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 72 bp GGGCATGGAGGTAATAATCTCCCTAGGACACAGAGATaGGGCCTAGAGGTTACCATACTAAAGGCTGACTTC +
Preference number: 3 (lower is better)
Translates to: GHGGNNLPRTQR*GLEVTILKADF
Trigger: GAAGTCAGCCTTTAGTATGGTAACCTCTAGGCCTCATCTCTGTGTCCTAGGGAGATTATTACCTCCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 72 bp GAAGGAACTGTGATCACAGCAACCTGGTGGCTAGACTaGGTATTCGGAATGACAGAGCTAGCAATGGCTTTG +
Preference number: 3 (lower is better)
Translates to: EGTVITATWWLD*VFGMTELAMAL
Trigger: CAAAGCCATTGCTAGCTCTGTCATTCCGAATACTCAGTCTAGCCACCAGGTTGCTGTGATCACAGTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR TCA 72 bp TTCTCATCATTCTTCGACACCAGCCCAGACTTGCCTTaGACCCTTTCTCTGGAATGTTCATTTCCTGGGCGA +
Preference number: 3 (lower is better)
Translates to: FSSFFDTSPDLP*TLSLECSFPGR
Trigger: TCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 72 bp TTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTaGGTCCTCTCAGTCACCCTCAGCCACACTTTCAGG +
Preference number: 3 (lower is better)
Translates to: FPPNCFHHSSIF*VLSVTLSHTFR
Trigger: CCTGAAAGTGTGGCTGAGGGTGACTGAGAGGACTCAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CCA 72 bp AAGAGCTACAACAAGACAAAGTCCACCGCCAGCGCCTaGCAGCCAAAGAAGGACTTTTGCTCTGCTAAATTA +
Preference number: 3 (lower is better)
Translates to: KSYNKTKSTASA*QPKKDFCSAKL
Trigger: TAATTTAGCAGAGCAAAAGTCCTTCTTTGGCTGCCAGGCGCTGGCGGTGGACTTTGTCTTGTTGTAGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTT +
Preference number: 3 (lower is better)
Translates to: THTLTHTRCENVFSRKHLHGMSI*ELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCG +
Preference number: 3 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLSLPGV*TKMGFS
Trigger: CGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGA...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCAT +
Preference number: 3 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNNFQPV*HQVLSH
Trigger: ATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTT...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp AATCCACAGGAGCCGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTTCCTGGAGTGGTAAATaGCTTAGGAAATTGAAATGT +
Preference number: 3 (lower is better)
Translates to: NPQEPSRGRNCDHSNLVASWSGK*LRKLKC
Trigger: ACATTTCAATTTCCTAAGCAATTTACCACTCCAGGA...AGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTACCAAGTTCCTTTTCTaGTCACTGACCATAAGGGTC +
Preference number: 3 (lower is better)
Translates to: APDLSCFRFTLGSVFHASTKFLF*SLTIRV
Trigger: GACCCTTATGGTCAGTGACAAGAAAAGGAACTTGGT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTGTGATAGGGTCCCCTTaGGCCTGCATGTATCTGACA +
Preference number: 3 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFVIGSP*ACMYLT
Trigger: TGTCAGATACATGCAGGCCAAAGGGGACCCTATCAC...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR TCA 72 bp TGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTaGGCTATGGTAATTCTCAGGAAACAGCTATTCTGC +
Preference number: 3 (lower is better)
Translates to: WDQFLSRECQSQ*AMVILRKQLFC
Trigger: GCAGAATAGCTGTTTCCTGAGAATTACCATAGCTCACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp AGGTTAAAAGGATTTGGAGTGATGGATACACACTGCTaGTGTATAAAGAACCCCTTGCTGCCCAGGATGTGG +
Preference number: 3 (lower is better)
Translates to: RLKGFGVMDTHC*CIKNPLLPRMW
Trigger: CCACATCCTGGGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCTTTTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp CTTGCCTTGAACCCTTTCTCTGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTCAACTGCATTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LALNPFSGMFIS*AISRAFNCIAS
Trigger: GGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR-3UTR CAA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCCGCGAACTGTATTCATaGTACTATTTCTGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCRELYS*YYFWCR
Trigger: TCTGCACCAGAAATAGTACAATGAATACAGTTCGCG...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCGCGAACTGTATTCATaGTACTATTTCTGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSERELYS*YYFWCR
Trigger: TCTGCACCAGAAATAGTACAATGAATACAGTTCGCG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CCA 72 bp GAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTaGTTATTAACATCTCATTCCCTCAGTGAGGAGACA +
Preference number: 3 (lower is better)
Translates to: ENPSSAPSLCPT*LLTSHSLSEET
Trigger: TGTCTCCTCACTGAGGGAATGAGATGTTAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCACTGTTTGCTCAAAGTTaGTGTTTAGGGGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSLFAQS*CLGALG
Trigger: GCCCAGAGCCCCTAAACACAAACTTTGAGCAAACAG...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp ATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCCATTACCCCGTGTCCTTaGACTTTATTCTTCTTGATT +
Preference number: 3 (lower is better)
Translates to: ISTKHSLEKAAPSWYTAPITPCP*TLFFLI
Trigger: AATCAAGAAGAATAAAGTCAAAGGACACGGGGTAAT...GGGTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CCA 72 bp TTTCTCCCACCTTTACTTCACCTGAGTTCCAGGGATTaGACTCATTCAGTAAGGCTTGCTTGCCAATTATCT +
Preference number: 3 (lower is better)
Translates to: FLPPLLHLSSRD*THSVRLACQLS
Trigger: AGATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGGTGAAGTAAAGGTGGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR-3UTR CAA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCTCCTGGAGTGGTAAATaGCTTAGGAAATTGAAATGT +
Preference number: 3 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAASWSGK*LRKLKC
Trigger: ACATTTCAATTTCCTAAGCAATTTACCACTCCAGGA...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCACTGACAGACAGCTCCTaGTTCATCTTACCCATTATA +
Preference number: 3 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSLTDSS*FILPII
Trigger: TATAATGGGTAAGATGAACAAGGAGCTGTCTGTCAG...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTAAGCCTGTGTCCCACTaGGTTATTAACATCTCATTC +
Preference number: 3 (lower is better)
Translates to: LSKFITGISFYLGSASPSKPVSH*VINISF
Trigger: GAATGAGATGTTAATAACCAAGTGGGACACAGGCTT...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 72 bp CATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTaGCTCATACCTACTCTTGTATGGTTGGAGTCTAAC +
Preference number: 3 (lower is better)
Translates to: HGNANYYCRSCQ*LIPTLVWLESN
Trigger: GTTAGACTCCAACCATACAAGAGTAGGTATGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACTGACAGACAGCTCCTaGTTCATCTTACCCATTATA +
Preference number: 3 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLLTDSS*FILPII
Trigger: TATAATGGGTAAGATGAACAAGGAGCTGTCTGTCAG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR GCA 72 bp ATTGGCTCATTAAATAAGACCCTAGAAAGGTCTAGCTaGCAGATTGGAAAGGTATCTGCAACATCATTTATC +
Preference number: 3 (lower is better)
Translates to: IGSLNKTLERSS*QIGKVSATSFI
Trigger: GATAAATGATGTTGCAGATACCTTTCCAATCTGGCAGCTAGACCTTTCTAGGGTCTTATTTAATGAGCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
3UTR TCA 72 bp TTGACTGTAACGTCTCACCCCATAACTGAATTTCTATaGGACCAAGATTTTAAACTCTCAATATTCCCTAGA +
Preference number: 3 (lower is better)
Translates to: LTVTSHPITEFL*DQDFKLSIFPR
Trigger: TCTAGGGAATATTGAGAGTTTAAAATCTTGGTCTCATAGAAATTCAGTTATGGGGTGAGACGTTACAGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR TCA 72 bp AATATTCTCTTCCATAGAAACAGAAGTCCAGCCATATaGGATCTTAGCTCAAACTTCAAAAGAATGTGCCAA +
Preference number: 3 (lower is better)
Translates to: NILFHRNRSPAI*DLSSNFKRMCQ
Trigger: TTGGCACATTCTTTTGAAGTTTGAGCTAAGATCTCATATGGCTGGACTTCTGTTTCTATGGAAGAGAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: SLGLRQEGGARHRGACAYLGASE*PPHGMS
Trigger: GCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAG...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGTCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCCAGCACCTGCAGCTaGGAGGTCAGGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLLLGTVPHCPSPWLEPVSSTCS*EVRPPG
Trigger: CCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGA...GACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGGATGGGCGTCTCGTCTaGATTGCCCATCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRDGRLV*IAHLGH
Trigger: GTGGCCCAGATGGGCAATGCAGACGAGACGCCCATC...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp GGTACACTGCACCCCGGTCAGTCAGTCCGGTGTCTGTaGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTLHPGQSVRCL*LGTVPHCPSPW
Trigger: CCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACACCGGACTGACTGACCGGGGTGCAGTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACAACTGCTTGGCAGCCTaGCAGTTGTTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLGLRQEGGARHRGACAYNCLAA*QLLVLS
Trigger: CGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTT...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp GGGGCCTCGGAATGCCCGCCGCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTTGCGCCAGTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: GASECPPHGMSI*ELWLHFAPVSN
Trigger: GTTCGAGACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CCA 90 bp GCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGAGGAAAATGGGAGGTaGCATTCGTCGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALCCWLGRSGCCPWVKCWEENGR*HSSGLP
Trigger: GGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTC...CCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGCAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWQTFHS*GLGMPA
Trigger: GGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTG...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CWLGRSGCCPWVKCWGLRASLAV*AQLQFS
Trigger: GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGC...CCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLARRMA*AFWSCG
Trigger: GCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGC...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GGTGGTGGGAGGTGGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTGAGTCCTCACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGRWWEVLRHRSGHLSPHSAGK*QAFQSG
Trigger: ACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTG...AGGACTCAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp GGTGGTGGGAGGTGGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTGAGTCCTGCTGTGGCTTCACTTTaGGCCAGTCTCGAACATTTT +
Preference number: 4 (lower is better)
Translates to: GGGRWWEVLRHRSGHLSPAVASL*ASLEHF
Trigger: AAAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGC...AGGACTCAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp GAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGGGCAGCGGATCTCCATaGCACTGGGAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EPVSGCVSCTVRLPYYPVGSGSP*HWETSQ
Trigger: CTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCC...CACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGQGAAHGLSAGVLGLSGGMPAA*HEHFGA
Trigger: AGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCC...ACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACTACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: SLGLRQEGGARHRGACAYYSATR*STRANL
Trigger: AAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTA...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CPPLGFSESLIAHFGPSAARRMA*AFWSCG
Trigger: GCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGC...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TGGCTGGAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACTCCTCGGCCAGGTGTTaGGGGACTGGCACTTTATGC +
Preference number: 4 (lower is better)
Translates to: WLEPVSGCVSCTVRLPYYSSARC*GTGTLC
Trigger: GCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGA...GTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp GGTGGTGGGAGGTGGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTGAGTCCTATGTTCCCCTCAAAATaGTGTACGGTGGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: GGGRWWEVLRHRSGHLSPMFPSK*CTVVTS
Trigger: GGAAGTTACCACCGTACATCATTTTGAGGGGAACAT...AGGACTCAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TGTCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: CLLLGTVPHCPSPWLEPVIWLGE*EFQGQD
Trigger: GTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGAT...GACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACTCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VENYPRSLGLRQEGGARHSSQSQ*HGTGSH
Trigger: ATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGA...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGTGGCCTGCATGTATCTaGCATACTCAGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: EPVSGCVSCTVRLPYYPVWPACI*HTQPLA
Trigger: AGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCA...CACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGCACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRHSAGK*QAFQSG
Trigger: ACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTG...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACAGATGTGGCACTTTCTaGACCCCTGGACAATTGATT +
Preference number: 4 (lower is better)
Translates to: SLGLRQEGGARHRGACAYRCGTF*TPGQLI
Trigger: AATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCT...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRLGASE*PPHGMS
Trigger: GCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TGTCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCA +
Preference number: 4 (lower is better)
Translates to: CLLLGTVPHCPSPWLEPVGSPLA*MYLTYS
Trigger: TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC...GACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACACTTCCAACCAGTCTTaGATCAAGTCCTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: SLGLRQEGGARHRGACAYTSNQS*IKSSVI
Trigger: GATGACTGAGGACTTGATGCAAGACTGGTTGGAAGT...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTTCCAGTGGGGCTGAGTaGCAGGTTCCCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCSSGAE*QVPSQK
Trigger: CTTCTGGCTGGGAACCTGGCACTCAGCCCCACTGGA...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGGAGGAAAATGGGAGGTaGCATTCGTCGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLEENGR*HSSGLP
Trigger: GGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTC...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGACACCCCAAACTGCTTaGCAGCCTGACAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EPVSGCVSCTVRLPYYPVTPQTA*QPDSCW
Trigger: CCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGT...CACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGAGCATTTTGGAGCTGTaGCTTCACTTTGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWSILEL*LHFAPV
Trigger: GACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCT...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp CCTGTGCATGCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTTACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: PVHALCCWLGRSGCCPWVYSATR*STRANL
Trigger: AAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTA...AACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: VENYPRSLGLRQEGGARHQVLRD*HFMPQR
Trigger: TCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTG...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWQVLRD*HFMPQR
Trigger: TCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTG...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCTCCAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SVVRDSAPLSLALAGACLQFLPA*CLDQDG
Trigger: CCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTG...GAGACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGQGAAHGLSAGVLGLSGKLLEM*HFLNPW
Trigger: CCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTT...ACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNARRMA*AFWSCG
Trigger: GCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGC...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTCCTCGGCCAGGTGTTaGGGGACTGGCACTTTATGC +
Preference number: 4 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHSSARC*GTGTLC
Trigger: GCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGA...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGATGTTCCCCTCAAAATaGTGTACGGTGGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRMFPSK*CTVVTS
Trigger: GGAAGTTACCACCGTACATCATTTTGAGGGGAACAT...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLLGASE*PPHGMS
Trigger: GCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAG...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATGGCAGCGGATCTCCATaGCACTGGGAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHGSGSP*HWETSQ
Trigger: CTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCC...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCATCCAGTGGGGCTGAGTaGCAGGTTCCCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPSSGAE*QVPSQK
Trigger: CTTCTGGCTGGGAACCTGGCACTCAGCCCCACTGGA...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: CWLGRSGCCPWVKCWGLRRACPI*SPKVRF
Trigger: GAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG...CCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTGAGGAAAATGGGAGGTaGCATTCGTCGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCEENGR*HSSGLP
Trigger: GGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTC...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACGGTAAGTGCTAGCCATGAGCAGGGCACCAGTGATGGTGCAGGATCTTTGACTACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TVSASHEQGTSDGAGSLTTRGSP*PYRRGS
Trigger: GCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGT...AGTCAAAGATCCTGCACCATCACTGGTGCCCTGCTCATGGCTAGCACTTACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHTRGSP*PYRRGS
Trigger: GCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGT...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCTGTGCATGCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTA +
Preference number: 4 (lower is better)
Translates to: PVHALCCWLGRSGCCPWVMGFSP*LSTVTL
Trigger: TAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCAT...AACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGASLAV*AQLQFS
Trigger: GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGC...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCTCCAGCACCTGCAGCTaGGAGGTCAGGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVSSTCS*EVRPPG
Trigger: CCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGA...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGCATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: EPVSGCVSCTVRLPYYPVHNSSS*LPGRGL
Trigger: AAGCCCTCTACCGGGAAGTCATGAGGATGAATTATG...CACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATA +
Preference number: 4 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRSRAFN*IASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TGGCTGGAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACGGGACTGGCACTTTATaGCTCAGAGACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: WLEPVSGCVSCTVRLPYYGTGTL*LRDRSY
Trigger: GTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCC...GTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp CCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCGATGGGCGTCTCGTCTaGATTGCCCATCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDQHKTLFGKGCSFLVHCDGRLV*IAHLGH
Trigger: GTGGCCCAGATGGGCAATGCAGACGAGACGCCCATC...GCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGGATGGGCGTCTCGTCTaGATTGCCCATCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRDGRLV*IAHLGH
Trigger: GTGGCCCAGATGGGCAATGCAGACGAGACGCCCATC...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGACTTCCAACCAGTCTTaGATCAAGTCCTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWTSNQS*IKSSVI
Trigger: GATGACTGAGGACTTGATGCAAGACTGGTTGGAAGT...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp ATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCCTCCAGTGGGGCTGAGTaGCAGGTTCCCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISTKHSLEKAAPSWYTAPSSGAE*QVPSQK
Trigger: CTTCTGGCTGGGAACCTGGCACTCAGCCCCACTGGA...GGGTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGACAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGQTFHS*GLGMPA
Trigger: GGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTG...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRGMFIS*AISRAF
Trigger: GAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCC...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WDCLIRYSCCPPLGFSESASLAV*AQLQFS
Trigger: GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGC...GCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAACAGAGTCAGTGGCATaGCACCGGAAGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: CPPLGFSESLIAHFGPSATESVA*HRKPFR
Trigger: CCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGT...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGTCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLSSQSQ*HGTGSH
Trigger: ATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGA...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GACGGACACTTGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGCTGTGTGTCGTCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DGHLCSHPFLKIAEGCVSSSQSQ*HGTGSH
Trigger: ATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGA...CGACACACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 72 bp AGTGACAAGCTTTTCAGTCAGGTCCTCGGCCAGGTGTaGAGGGACTGGCACTTTATGCCTCAGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SDKLFSQVLGQV*RDWHFMPQRQV
Trigger: GACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 72 bp GCCACACTTTCAGGACCACATTCTTTTGGCGGTTCTTaGGGCAACTCGCCCTCGATTTCCCAGAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: ATLSGPHSFGGS*GNSPSISQRTS
Trigger: TGACGTCCTCTGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAAAGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 72 bp AGTCACCCTCAGCCACACTTTCAGGACCACATTCTTTaGGCGGTTCTTTGGGCAACTCGCCCTCGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SHPQPHFQDHIL*AVLWATRPRFP
Trigger: GGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAAAGTGTGGCTGAGGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR TCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAAACTGCTTGGCAGCCTaGCAGTTGTTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGNCLAA*QLLVLS
Trigger: CGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTT...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCCCTGCCTGGTGTCTTaGCCAAGATGGGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRPCLVS*PRWAFR
Trigger: GCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TTGTTTGACGGACACTTGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGCTGTCCCTGCCTGGTGTCTTaGCCAAGATGGGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: LFDGHLCSHPFLKIAEGCPCLVS*PRWAFR
Trigger: GCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGG...ACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp CTGGAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCAGATGTGGCACTTTCTaGACCCCTGGACAATTGATT +
Preference number: 4 (lower is better)
Translates to: LEPVSGCVSCTVRLPYYPRCGTF*TPGQLI
Trigger: AATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCT...GGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCGATGGGCGTCTCGTCTaGATTGCCCATCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAADGRLV*IAHLGH
Trigger: GTGGCCCAGATGGGCAATGCAGACGAGACGCCCATC...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCIWLGE*EFQGQD
Trigger: GTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGAT...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGGAGGAAAATGGGAGGTaGCATTCGTCGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRREENGR*HSSGLP
Trigger: GGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTC...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAACACCCCAAACTGCTTaGCAGCCTGACAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: CPPLGFSESLIAHFGPSATPQTA*QPDSCW
Trigger: CCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGT...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACGGTAAGTGCTAGCCATGAGCAGGGCACCAGTGATGGTGCAGGATCTTTGACTACACCCCAAACTGCTTaGCAGCCTGACAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVSASHEQGTSDGAGSLTTPQTA*QPDSCW
Trigger: CCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGT...AGTCAAAGATCCTGCACCATCACTGGTGCCCTGCTCATGGCTAGCACTTACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GLSDKVFMLSTPRILREPQTFHS*GLGMPA
Trigger: GGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCATCCCTCGCTGTCTaGGCACAGCTCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCASLAV*AQLQFS
Trigger: GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGC...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGTGTTCATGTTCTCCATaGAACTCTTCACAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALCCWLGRSGCCPWVKCWCSCSP*NSSQSQ
Trigger: CTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA...CCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGTCCAGCACCTGCAGCTaGGAGGTCAGGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLSSTCS*EVRPPG
Trigger: CCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGA...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTTCCAGCACCTGCAGCTaGGAGGTCAGGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFSSTCS*EVRPPG
Trigger: CCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGA...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGGCTGGAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACAGGACCACATTCTTTTaGCGGTTCTTTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: WLEPVSGCVSCTVRLPYYRTTFF*RFFGQL
Trigger: GAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCT...GTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 72 bp CCTGGTGTCTTGACCAAGATGGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAGGGGACTTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGVLTKMGFSPW*STVTLEGTSKQ
Trigger: CTGCTTAGAAGTCCCCTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 72 bp TCCAGTTCTCCGTCTCCACACAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCATCCATCCGTAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SSSPSPHNFQPV*HQVLSHPSVAV
Trigger: CACCGCTACGGATGGATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTTGTGTGGAGACGGAGAACTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
3UTR CAA 72 bp TCGATTTCCCAGAGGACGTCACCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTTCTGAACCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: SISQRTSPSSSK*LEMWHFLNPWT
Trigger: TGTCCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGGTGACGTCCTCTGGGAAATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR TCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGACCACCACCATCAGCTTaGACCCTGCATCATAACTGC +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGPPPSA*TLHHNC
Trigger: GCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGG...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACAACTGCTTGGCAGCCTaGCAGTTGTTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNNCLAA*QLLVLS
Trigger: CGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTT...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAAGCCCAGACTTGCCTTaGACCCTTTCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: CPPLGFSESLIAHFGPSASPDLP*TLSLEC
Trigger: ACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCT...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCTCCTCGGCCAGGTGTTaGGGGACTGGCACTTTATGC +
Preference number: 4 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAASSARC*GTGTLC
Trigger: GCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGA...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CCTGTGCATGCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAGATTCTTCATTTTCTaGAAAGGTTACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PVHALCCWLGRSGCCPWVRFFIF*KGYSLE
Trigger: CTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCT...AACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp AATCCACAGGAGCCGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTGGGACTGGCACTTTATaGCTCAGAGACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: NPQEPSRGRNCDHSNLVAGTGTL*LRDRSY
Trigger: GTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCC...AGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCATAGTCGTGTGTCCTaGGCAGAGCCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: GLSDKVFMLSTPRILREPHSRVS*AEPAHS
Trigger: AGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp ATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCCCATAGTCGTGTGTCCTaGGCAGAGCCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: ISTKHSLEKAAPSWYTAPHSRVS*AEPAHS
Trigger: AGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG...GGGTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGAGGAAAATGGGAGGTaGCATTCGTCGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCEENGR*HSSGLP
Trigger: GGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTC...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCAACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPTRGSP*PYRRGS
Trigger: GCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGT...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTTRGSP*PYRRGS
Trigger: GCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGT...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNGMPAA*HEHFGA
Trigger: AGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCC...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATCAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHQFLPA*CLDQDG
Trigger: CCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTG...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACAGAGTCAGTGGCATaGCACCGGAAGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: PDQHKTLFGKGCSFLVHCTESVA*HRKPFR
Trigger: CCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGT...GCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp CTTGTATGGTTGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVWLESNSSCGLRPKPSHKLLEM*HFLNPW
Trigger: CCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTT...ATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGAGGACCACATTCTTTTaGCGGTTCTTTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLRTTFF*RFFGQL
Trigger: GAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCT...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp AATCCACAGGAGCCGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTCATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NPQEPSRGRNCDHSNLVAHNSSS*LPGRGL
Trigger: AAGCCCTCTACCGGGAAGTCATGAGGATGAATTATG...AGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGGCAGGCCAAAGCTGTTaGAGGGCTGAGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEAGQSC*RAEVEE
Trigger: TTCCTCAACCTCAGCCCTTCAACAGCTTTGGCCTGC...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp ATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACCCCCACCACCATCAGCTTaGACCCTGCATCATAACTGC +
Preference number: 4 (lower is better)
Translates to: ISTKHSLEKAAPSWYTAPPPPSA*TLHHNC
Trigger: GCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGG...GGGTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp AGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCACAACTGCTTGGCAGCCTaGCAGTTGTTGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RSAQNTLWKRLLLPGTLHNCLAA*QLLVLS
Trigger: CGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTT...GTGCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTCACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCHSAGK*QAFQSG
Trigger: ACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTG...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCCTGACAGTTGTTGGTaGTCTCGGCGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: APDLSCFRFTLGSVFHASPDSCW*SRRTPP
Trigger: TGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCCTGACAGTTGTTGGTaGTCTCGGCGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEPDSCW*SRRTPP
Trigger: TGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGCACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTCTTGGGGCCTCGGAATaGCCGCCGCATGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: STFIALSSCLTDTCVLTLLGASE*PPHGMS
Trigger: GCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAG...AAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCATAGTCGTGTGTCCTaGGCAGAGCCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEHSRVS*AEPAHS
Trigger: AGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGATCAGCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTGCACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSAKGSATMLSNVSRQPCTRGSP*PYRRGS
Trigger: GCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGT...GCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GTGTCCCCACGTATAGGAGCACTCATTGGTCTGTGTCTGAGTAGGGATCTTAAGACACCCCAAACTGCTTaGCAGCCTGACAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VSPRIGALIGLCLSRDLKTPQTA*QPDSCW
Trigger: CCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGT...CTTAAGATCCCTACTCAGACACAGACCAATGAGTGCTCCTATACGTGGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR CAA 72 bp ATGGCTGTGATCCTCAATTTCTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCGCCCTGGTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: MAVILNFSLPGV*TKMGFSPWLST
Trigger: TGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTGAGGATCACAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR TCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCCACCACCATCAGCTTaGACCCTGCATCATAACTGC +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLPPPSA*TLHHNC
Trigger: GCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCGCCCGCCGCATGGCATaGGCATTTTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HFYSTFFLFDGHLCSHPFARRMA*AFWSCG
Trigger: GCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGC...GAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp TTGTTTGACGGACACTTGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGCTGTAGCCCAGACTTGCCTTaGACCCTTTCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LFDGHLCSHPFLKIAEGCSPDLP*TLSLEC
Trigger: ACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCT...ACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR TCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCACACTCTGCTGGTAAGTaGCAAGCTTTTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPHSAGK*QAFQSG
Trigger: ACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTG...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGATCAGCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTGCCCTGACAGTTGTTGGTaGTCTCGGCGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSAKGSATMLSNVSRQPCPDSCW*SRRTPP
Trigger: TGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGG...GCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAGCTGTGGCTTCACTTTaGGCCAGTCTCGAACATTTT +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGAVASL*ASLEHF
Trigger: AAAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGC...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGTCCAGTGGGGCTGAGTaGCAGGTTCCCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLSSGAE*QVPSQK
Trigger: CTTCTGGCTGGGAACCTGGCACTCAGCCCCACTGGA...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCCCATCCTCCAACTCTTaGATCTCAACCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PDQHKTLFGKGCSFLVHCPSSNS*ISTSSS
Trigger: GGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGG...GCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCCATCCTCCAACTCTTaGATCTCAACCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRPSSNS*ISTSSS
Trigger: GGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACGGTAAGTGCTAGCCATGAGCAGGGCACCAGTGATGGTGCAGGATCTTTGACTCTTTCTGCATATCTATaGGGCCATCCTCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: TVSASHEQGTSDGAGSLTLSAYL*GHPPTL
Trigger: AAGAGTTGGAGGATGGCCCCATAGATATGCAGAAAG...AGTCAAAGATCCTGCACCATCACTGGTGCCCTGCTCATGGCTAGCACTTACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCIWLGE*EFQGQD
Trigger: GTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGAT...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACAGCATTTTGGAGCTGTaGCTTCACTTTGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNSILEL*LHFAPV
Trigger: GACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCT...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGAGCATTTTGGAGCTGTaGCTTCACTTTGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRSILEL*LHFAPV
Trigger: GACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCT...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGTACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRYSATR*STRANL
Trigger: AAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTA...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGATCAGCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTGCACAGAGTCAGTGGCATaGCACCGGAAGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: RSAKGSATMLSNVSRQPCTESVA*HRKPFR
Trigger: CCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGT...GCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp CTTCTCATCATTCTTCGACACCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATGTTCATTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLIILRHQPRLA*NPFSGMFISWA
Trigger: CGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR TCA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCTGGCCTGCATGTATCTaGCATACTCAGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVWPACI*HTQPLA
Trigger: AGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCA...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTAGCCCAGACTTGCCTTaGACCCTTTCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLSPDLP*TLSLEC
Trigger: ACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCT...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGTCCTCGGCCAGGTGTTaGGGGACTGGCACTTTATGC +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLSSARC*GTGTLC
Trigger: GCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGA...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTACCCTGCCTGGTGTCTTaGCCAAGATGGGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLPCLVS*PRWAFR
Trigger: GCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGG...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCCCTGCCTGGTGTCTTaGCCAAGATGGGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFPCLVS*PRWAFR
Trigger: GCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGG...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AATCCACAGGAGCCGAGTAGAGGAAGGAACTGTGATCACAGCAACCTGGTGGCTTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATA +
Preference number: 4 (lower is better)
Translates to: NPQEPSRGRNCDHSNLVASRAFN*IASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA...AGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTGGGACTGGCACTTTATaGCTCAGAGACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLGTGTL*LRDRSY
Trigger: GTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCC...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCGGGACTGGCACTTTATaGCTCAGAGACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAAGTGTL*LRDRSY
Trigger: GTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCC...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAGGCAGCGGATCTCCATaGCACTGGGAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLGSGSP*HWETSQ
Trigger: CTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCC...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLRACPI*SPKVRF
Trigger: GAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: APDLSCFRFTLGSVFHASRACPI*SPKVRF
Trigger: GAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: APDLSCFRFTLGSVFHASQVLRD*HFMPQR
Trigger: TCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCCAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: TGYTVRNHGHVCGTLTDCQFLPA*CLDQDG
Trigger: CCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTG...GCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTTGTTCATGTTCTCCATaGAACTCTTCACAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCCSCSP*NSSQSQ
Trigger: CTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACGGTAAGTGCTAGCCATGAGCAGGGCACCAGTGATGGTGCAGGATCTTTGACTTGTTCATGTTCTCCATaGAACTCTTCACAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TVSASHEQGTSDGAGSLTCSCSP*NSSQSQ
Trigger: CTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA...AGTCAAAGATCCTGCACCATCACTGGTGCCCTGCTCATGGCTAGCACTTACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp AACAGGAGGTGGTTTAATGCCTGTGTCTTCCGAATCTaGTTCATGTCTGTCTCCATCACTTCCCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NRRWFNACVFRI*FMSVSITSPRS
Trigger: GCTTCTGGGGGAAGTGATGGAGACAGACATGAACAAGATTCGGAAGACACAGGCATTAAACCACCTCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp CCTGTGCCATGGTTTGAGTGTGGTCAGAGAACAACTTaGTGGGCTCGTTCTTTCCTTTCTCCCACCTTTACT +
Preference number: 4 (lower is better)
Translates to: PVPWFECGQRTT*WARSFLSPTFT
Trigger: AGTAAAGGTGGGAGAAAGGAAAGAACGAGCCCACAAAGTTGTTCTCTGACCACACTCAAACCATGGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
CDS-3UTR TCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEHNSSS*LPGRGL
Trigger: AAGCCCTCTACCGGGAAGTCATGAGGATGAATTATG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTAGATGTGGCACTTTCTaGACCCCTGGACAATTGATT +
Preference number: 4 (lower is better)
Translates to: GLSDKVFMLSTPRILREPRCGTF*TPGQLI
Trigger: AATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCT...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTGCTGTGGCTTCACTTTaGGCCAGTCTCGAACATTTT +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLAVASL*ASLEHF
Trigger: AAAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGC...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCA +
Preference number: 4 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVGSPLA*MYLTYS
Trigger: TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTGGCAGCGGATCTCCATaGCACTGGGAAACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSKFITGISFYLGSASPSGSGSP*HWETSQ
Trigger: CTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCC...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACACTTCCAACCAGTCTTaGATCAAGTCCTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNTSNQS*IKSSVI
Trigger: GATGACTGAGGACTTGATGCAAGACTGGTTGGAAGT...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCACAAACCTTCCATTCTTaGGGCCTCGGAATGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSQTFHS*GLGMPA
Trigger: GGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTG...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGGMFIS*AISRAF
Trigger: GAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCC...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGATCAGCAAAAGGCAGTGCAACTATGTTAAGTAATGTGAGCAGACAGCCCTGCCAGGTGTTGAGGGACTaGCACTTTATGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSAKGSATMLSNVSRQPCQVLRD*HFMPQR
Trigger: TCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTG...GCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTA +
Preference number: 4 (lower is better)
Translates to: THTLTHTRCENVFSRKHLMGFSP*LSTVTL
Trigger: TAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCAT...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGGACCACATTCTTTTaGCGGTTCTTTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSERTTFF*RFFGQL
Trigger: GAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCT...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGCCACCACCATCAGCTTaGACCCTGCATCATAACTGC +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLPPPSA*TLHHNC
Trigger: GCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGG...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGTGGCCTGCATGTATCTaGCATACTCAGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLWPACI*HTQPLA
Trigger: AGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCA...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTATGTTCCCCTCAAAATaGTGTACGGTGGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: APDLSCFRFTLGSVFHASMFPSK*CTVVTS
Trigger: GGAAGTTACCACCGTACATCATTTTGAGGGGAACAT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAAGATTCTTCATTTTCTaGAAAGGTTACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPRFFIF*KGYSLE
Trigger: CTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCT...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGCACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTCCTGACAGTTGTTGGTaGTCTCGGCGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: STFIALSSCLTDTCVLTLPDSCW*SRRTPP
Trigger: TGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGG...AAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR GCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATA +
Preference number: 4 (lower is better)
Translates to: GLSDKVFMLSTPRILREPSRAFN*IASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCCCGATTGATCATATCTaGCTTGGGGAATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAAPIDHI*LGEWEF
Trigger: GAATTCCCATTCCCCAAGCCAGATATGATCAATCGG...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTCCGATTGATCATATCTaGCTTGGGGAATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTPIDHI*LGEWEF
Trigger: GAATTCCCATTCCCCAAGCCAGATATGATCAATCGG...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCCGATTGATCATATCTaGCTTGGGGAATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: APDLSCFRFTLGSVFHASPIDHI*LGEWEF
Trigger: GAATTCCCATTCCCCAAGCCAGATATGATCAATCGG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTATCAAAGTTTATTACTGGGATCAGTTTCTATCTAGGGAGTGCCAGTCCCAGTGGAATGCCCGCCGCATaGCATGAGCATTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSKFITGISFYLGSASPSGMPAA*HEHFGA
Trigger: AGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCC...ACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTGTTTGACGGACACTTGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGCTGTGGAATGTTCATTTCCTaGGCGATTTCAAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LFDGHLCSHPFLKIAEGCGMFIS*AISRAF
Trigger: GAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCC...ACAGCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTATCTTCACAGAGTCAGTaGCATGGCACCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLSSQSQ*HGTGSH
Trigger: ATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGA...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTACATCAGCTTGAACCCTaGATCATAACTGCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLHQLEP*IITAAH
Trigger: ATGCGCCGCAGTTATGATGCAGGGTTCAAGCTGATG...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCA +
Preference number: 4 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLGSPLA*MYLTYS
Trigger: TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGGGGTCCCCTTTGGCCTaGATGTATCTGACATACTCA +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLGSPLA*MYLTYS
Trigger: TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCC...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTTCAAGAGCTTTCAACTaGATTGCCTCCCTAGTGATA +
Preference number: 4 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTSRAFN*IASLVI
Trigger: TATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGA...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTACCATCCTCCAACTCTTaGATCTCAACCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLPSSNS*ISTSSS
Trigger: GGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGG...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCCATCCTCCAACTCTTaGATCTCAACCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFPSSNS*ISTSSS
Trigger: GGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGG...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLRACPI*SPKVRF
Trigger: GAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLRACPI*SPKVRF
Trigger: GAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGAGCATTTTGGAGCTGTaGCTTCACTTTGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLSILEL*LHFAPV
Trigger: GACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCT...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTATACTCAGCCACTCGCTaGTCTACCAGAGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLYSATR*STRANL
Trigger: AAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTA...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLKLLEM*HFLNPW
Trigger: CCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTT...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTAAGTTGCTGGAGATGTaGCACTTTCTGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFKLLEM*HFLNPW
Trigger: CCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTT...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTaGTGTTCTCACCCTTTCCTGAAGATCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: HFYSTFFLFDGH*CSHPFLKIAEG
Trigger: GCCCTCTGCGATCTTCAGGAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 72 bp TATAAAGAACCCCTTGCTGCCCAGGATGTGGGTATGTaGTATACTCTCCTGAATTCAGAGAGGCAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: YKEPLAAQDVGM*YTLLNSERQLG
Trigger: TCCTAACTGCCTCTCTGAATTCAGGAGAGTATACAACATACCCACATCCTGGGCAGCAAGGGGTTCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp CTTTCTCCCACCTTTACTTCACCTGAGTTCCAGGGATaGGACTCATTCAGTAAGGCTTGCTTGCCAATTATC +
Preference number: 4 (lower is better)
Translates to: LSPTFTSPEFQG*DSFSKACLPII
Trigger: GATAATTGGCAAGCAAGCCTTACTGAATGAGTCCAATCCCTGGAACTCAGGTGAAGTAAAGGTGGGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
3UTR CAA 72 bp AATAGTATGTTTTCGTGTCAGTGCCTGTGCCATGGTTaGAGTGTGGTCAGAGAACAACTTTGTGGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: NSMFSCQCLCHG*SVVREQLCGLV
Trigger: AACGAGCCCACAAAGTTGTTCTCTGACCACACTCAAACCATGGCACAGGCACTGACACGAAAACATACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
CDS-3UTR GCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCAAGATTCTTCATTTTCTaGAAAGGTTACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPRFFIF*KGYSLE
Trigger: CTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCT...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGGATTTGGAGTGATGGATACACACTGCTGCTGTATAAAGAACCCCTTGCTGCCAGATTCTTCATTTTCTaGAAAGGTTACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RIWSDGYTLLLYKEPLAARFFIF*KGYSLE
Trigger: CTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCT...GGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACATAGTCGTGTGTCCTaGGCAGAGCCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLHSRVS*AEPAHS
Trigger: AGAGTGTGCTGGCTCTGCGCAGGACACACGACTATG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTCATCTGAGAAATATATaGCCACCTCATCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: GLSDKVFMLSTPRILREPHLRNI*PPHQIE
Trigger: CTCTATTTGATGAGGTGGCCATATATTTCTCAGATG...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTA +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLMGFSP*LSTVTL
Trigger: TAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCAT...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp ATTCGGAATGACAGAGCTAGCAATGGCTTTGCCTATGAGGTTCTGGTAGAATTTATGGGCTTTTCGCCCTaGTTGTCAACAGTCACTCTA +
Preference number: 4 (lower is better)
Translates to: IRNDRASNGFAYEVLVEFMGFSP*LSTVTL
Trigger: TAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCAT...AAATTCTACCAGAACCTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CTGCTGACTTACATGGGAATGCAAATTACTACTGTAGAAGTTGTCAGTGACTCACATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLTYMGMQITTVEVVSDSHNSSS*LPGRGL
Trigger: AAGCCCTCTACCGGGAAGTCATGAGGATGAATTATG...TGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTAGATGTGGCACTTTCTaGACCCCTGGACAATTGATT +
Preference number: 4 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFRCGTF*TPGQLI
Trigger: AATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCT...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR GCA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAACTTCCAACCAGTCTTaGATCAAGTCCTCAGTCATC +
Preference number: 4 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLTSNQS*IKSSVI
Trigger: GATGACTGAGGACTTGATGCAAGACTGGTTGGAAGT...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCACATCTGAGAAATATATaGCCACCTCATCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPHLRNI*PPHQIE
Trigger: CTCTATTTGATGAGGTGGCCATATATTTCTCAGATG...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLIWLGE*EFQGQD
Trigger: GTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGAT...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGCCGATTGATCATATCTaGCTTGGGGAATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLPIDHI*LGEWEF
Trigger: GAATTCCCATTCCCCAAGCCAGATATGATCAATCGG...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
3UTR CAA 72 bp AGACATCTTCCTTCAGATACCTGCTGGCAACAGGAATaGACTGTAACGTCTCACCCCATAACTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: RHLPSDTCWQQE*TVTSHPITEFL
Trigger: TAGAAATTCAGTTATGGGGTGAGACGTTACAGTCAATTCCTGTTGCCAGCAGGTATCTGAAGGAAGATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACAATTTCTCCCTGCCTaGTGTCTTGACCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLQFLPA*CLDQDG
Trigger: CCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGTGTTCATGTTCTCCATaGAACTCTTCACAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLCSCSP*NSSQSQ
Trigger: CTGACTCTGTGAAGAGTTCCATGGAGAACATGAACA...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAAGGACCACATTCTTTTaGCGGTTCTTTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLRTTFF*RFFGQL
Trigger: GAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCT...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR TCA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAATGTTCCCCTCAAAATaGTGTACGGTGGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLMFPSK*CTVVTS
Trigger: GGAAGTTACCACCGTACATCATTTTGAGGGGAACAT...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCATCTGAGAAATATATaGCCACCTCATCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFHLRNI*PPHQIE
Trigger: CTCTATTTGATGAGGTGGCCATATATTTCTCAGATG...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CCA 90 bp AGCACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTCATCTGAGAAATATATaGCCACCTCATCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: STFIALSSCLTDTCVLTLHLRNI*PPHQIE
Trigger: CTCTATTTGATGAGGTGGCCATATATTTCTCAGATG...AAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
3UTR CAA 72 bp AATGTCTGTTTTATCCTTTCAAGTGGTACTATGAACTaGTATCTGACAGTGTTACTGGTAACCAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: NVCFILSSGTMN*YLTVLLVTNLF
Trigger: AAACAAGTTGGTTACCAGTAACACTGTCAGATACAAGTTCATAGTACCACTTGAAAGGATAAAACAGACATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131487.8
CDS-3UTR CAA 90 bp GGTGGTGGGAGGTGGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTGAGTCCTCCAGCCAGAAGCCAGTaGGAATACTGGGCCCGAACG +
Preference number: 5 (lower is better)
Translates to: GGGRWWEVLRHRSGHLSPPARSQ*EYWART
Trigger: CGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGG...AGGACTCAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp GGTGGTGGGAGGTGGTGGGAGGTCCTTAGGCACCGCAGTGGCCACCTGAGTCCTGCCATCCTCCAACTCTaGGATCTCAACCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GGGRWWEVLRHRSGHLSPAILQL*DLNLFL
Trigger: GAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGC...AGGACTCAGGTGGCCACTGCGGTGCCTAAGGACCTCCCACCACCTCCCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS CCA 90 bp TGCTCGCCAAGTCGTCAGCTGAGAGGTCATACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGCCCTCAGTCCACTCAGGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: CSPSRQLRGHTRGSP*PYRRGSPQSTQAVQ
Trigger: CTGAACTGCCTGAGTGGACTGAGGGCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCTGACGACTTGGCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp AGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAGCCTGCGCTTACCCGGTAGAGGGCTTTTaGTTGCTCTGTCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: SLGLRQEGGARHRGACAYPVEGF*LLCQNF
Trigger: GAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGG...GTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TGTCTGTTGTTAGGGACAGTGCCCCATTGTCCCTCGCCCTGGCTGGAGCCTGTCGTTGAAGGGCTGAGGTaGAGGAAAATGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: CLLLGTVPHCPSPWLEPVVEGLR*RKMGGG
Trigger: GCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAAC...GACAGGCTCCAGCCAGGGCGAGGGACAATGGGGCACTGTCCCTAACAACAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp GTGGAGAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: VENYPRSLGLRQEGGARHSLPGV*TKMGFS
Trigger: CGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGA...GTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGCCGGTAGAGGGCTTTTaGTTGCTCTGTCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRPVEGF*LLCQNF
Trigger: GAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGG...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GGAAGCCATTCAGGATCAGCATCCCTCGCTGTCTGGGCACAGCTCCAGTTCTCCGTTGAAGGGCTGAGGTaGAGGAAAATGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: GSHSGSASLAVWAQLQFSVEGLR*RKMGGG
Trigger: GCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAAC...GGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CAA 90 bp GCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGTGATAGGGTCCCCTTaGGCCTGCATGTATCTGACA +
Preference number: 5 (lower is better)
Translates to: ALCCWLGRSGCCPWVKCWVIGSP*ACMYLT
Trigger: TGTCAGATACATGCAGGCCAAAGGGGACCCTATCAC...CCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS TCA 90 bp GCGCATGCCACGACTGAACTGAAACTTGCTCGCCAAGTCGTCAGCTaGGAGGTCATACCCGGGGAAGCCCATGGCCATATAGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: AHATTELKLARQVVS*EVIPGEAHGHIEGV
Trigger: TACCCCTTCTATATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCTGACGACTTGGCGAGCAAGTTTCAGTTCAGTCGTGGCATGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CCTGTGCATGCTCTGTGCTGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAGCTGTGGCTTCACTTaGCGCCAGTCTCGAACATTT +
Preference number: 5 (lower is better)
Translates to: PVHALCCWLGRSGCCPWVSCGFT*RQSRTF
Trigger: AAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCT...AACCCATGGGCAGCACCCTGACCGCCCTAACCAACAGCACAGAGCATGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp GAGCCTGTCTCTGGATGTGTGAGCTGCACTGTCCGGCTGCCTTATTACCCCGTGGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAG +
Preference number: 5 (lower is better)
Translates to: EPVSGCVSCTVRLPYYPVGFSPW*STVTLE
Trigger: CTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCC...CACGGGGTAATAAGGCAGCCGGACAGTGCAGCTCACACATCCAGAGACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGCAGGACCACATTCTTTaGGCGGTTCTTTGGGCAACT +
Preference number: 5 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWQDHIL*AVLWAT
Trigger: AGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTG...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp GAACTATCCCCGAAGCCTAGGGCTCAGACAGGAAGGTGGTGCACGCCACCGAGGAACCTCTTCCTCCTTTaGCTCTTCTTTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: ELSPKPRAQTGRWCTPPRNLFLL*LFFQGQ
Trigger: TTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTT...CCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGTCTCAGTGGTGGTGGGAGGTGGGTAGAGGGCTTTTTGTaGCTCTGTCAGAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: AAHGLSAGVLGLSGGGRWVEGFL*LCQNFP
Trigger: TGGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTAC...CCACCTCCCACCACCACTGAGACCTAAGACCCCAGCACTTAACCCATGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGACCAGCCAGAAGCCAGTaGGAATACTGGGCCCGAACG +
Preference number: 5 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGPARSQ*EYWART
Trigger: CGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGG...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TGTTGGTTAGGGCGGTCAGGGTGCTGCCCATGGGTTAAGTGCTGGGGTCTTAGGCCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: CWLGRSGCCPWVKCWGLRPSSSK*LEMWHF
Trigger: AAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG...CCTAAGACCCCAGCACTTAACCCATGGGCAGCACCCTGACCGCCCTAACCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS GCA 90 bp GTTGTTGGTGCTCTCGGCGTACTCCACCACCATCAGCTTGAACCCTaGATCATAACTGCGGCGCATGCCACGACTGAACTGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: VVGALGVLHHHQLEP*IITAAHATTELKLA
Trigger: AGCAAGTTTCAGTTCAGTCGTGGCATGCGCCGCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGGAGTACGCCGAGAGCACCAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TGGAGTCTAACAGCAGCTGTGGCTTACGGCCCAAACCCTCCCATTGCCCTTTTGGCCATCCTCCAACTCTaGGATCTCAACCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: WSLTAAVAYGPNPPIALLAILQL*DLNLFL
Trigger: GAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGC...CAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCCAACTCTaGGATCTCAACCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CPPLGFSESLIAHFGPSAAILQL*DLNLFL
Trigger: GAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGC...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGTTGAAGGGCTGAGGTaGAGGAAAATGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPVEGLR*RKMGGG
Trigger: GCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAAC...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTGTGATAGGGTCCCCTTaGGCCTGCATGTATCTGACA +
Preference number: 5 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCVIGSP*ACMYLT
Trigger: TGTCAGATACATGCAGGCCAAAGGGGACCCTATCAC...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp AGATGGGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGCCAGCCAGAAGCCAGTaGGAATACTGGGCCCGAACG +
Preference number: 5 (lower is better)
Translates to: RWDCLIRYSCCPPLGFSEPARSQ*EYWART
Trigger: CGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGG...CTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGGTTGAAGGGCTGAGGTaGAGGAAAATGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRVEGLR*RKMGGG
Trigger: GCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAAC...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GGACTGTCTGATAAGGTATTCATGCTGTCCACCCCTAGGATTCTCAGAGAGCCTTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: GLSDKVFMLSTPRILREPSLPGV*TKMGFS
Trigger: CGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGA...AGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNSLPGV*TKMGFS
Trigger: CGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGA...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCCCAGCCAGAAGCCAGTaGGAATACTGGGCCCGAACG +
Preference number: 5 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVPARSQ*EYWART
Trigger: CGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGG...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTCAGGACCACATTCTTTaGGCGGTTCTTTGGGCAACT +
Preference number: 5 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCQDHIL*AVLWAT
Trigger: AGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTG...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS GCA 90 bp GAAGGGCTGAGGTTGAGGAAAATGGGAGGTGGCATTCGTCGGGCTTaGCCAATCTGGAGTCCTAAAGTCAGATTCTTCATTTTCCATGCG +
Preference number: 5 (lower is better)
Translates to: EGLRLRKMGGGIRRA*PIWSPKVRFFIFHA
Trigger: CGCATGGAAAATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCTCAGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CAA 90 bp CAGTTCTCCGTCTCCACACAACTTCCAACCAGTCTTGCATCAAGTCCTCAGTCAGCCATCCTCCAACTCTaGGATCTCAACCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QFSVSTQLPTSLASSPQSAILQL*DLNLFL
Trigger: GAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGC...TGACTGAGGACTTGATGCAAGACTGGTTGGAAGTTGTGTGGAGACGGAGAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CAA 90 bp TGTCCACCCCTAGGATTCTCAGAGAGCCTCATTGCCCATTTTGGTCCCTCTGCAGTAGAGGGCTTTTTGTaGCTCTGTCAGAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPPLGFSESLIAHFGPSAVEGFL*LCQNFP
Trigger: TGGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTAC...TGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGAGGCCAGAAGAGGTCATAAGATGCCCTGGAACTGGAGGTACAGCTGGTTGTCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: QRPEEVIRCPGTGGTAGCHGMSI*ELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATG...ACAACCAGCTGTACCTCCAGTTCCAGGGCATCTTATGACCTCTTCTGGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNQPRLA*NPFSGM
Trigger: CATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TCCCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTTCCCTGCCTGGTGTCTaGACCAAGATGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SQISTKHSLEKAAPSWYTSLPGV*TKMGFS
Trigger: CGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGA...AGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp CCTGTGAAGGTACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCACCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: PVKVHTHSLTLGVRTCSPPSSSK*LEMWHF
Trigger: AAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG...TGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGTACCTTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TCATATGTATGCAGGACCTGGCAGAGGCCAGAAGAGGTCATAAGATGCCCTGGACCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: SYVCRTWQRPEEVIRCPGPSSSK*LEMWHF
Trigger: AAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG...TCCAGGGCATCTTATGACCTCTTCTGGCCTCTGCCAGGTCCTGCATACATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS CCA 90 bp AGGTTGAGGAAAATGGGAGGTGGCATTCGTCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTCTTCATTTTCCATGCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: RLRKMGGGIRRACPI*SPKVRFFIFHAPSE
Trigger: CTCAGAAGGCGCATGGAAAATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CAA 90 bp CATTGCCCATTTTGGTCCCTCTGCAGCCATCCTCTTACAAGTTTTCCTCCCAACCCGGTAGAGGGCTTTTaGTTGCTCTGTCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: HCPFWSLCSHPLTSFPPNPVEGF*LLCQNF
Trigger: GAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGG...GTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: APDLSCFRFTLGSVFHASQPRLA*NPFSGM
Trigger: CATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAG +
Preference number: 5 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLGFSPW*STVTLE
Trigger: CTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCC...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS TCA 90 bp ACAAGGCATTACCCAGGGACAGGACAGTCTCATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTTTTTGTTGCTCTGTCAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: TRHYPGTGQSHNSSS*LPGRGLFVALSELP
Trigger: GGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGGGAAGTCATGAGGATGAATTATGAGACTGTCCTGTCCCTGGGTAATGCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000127596.3
CDS TCA 90 bp GGAATGGGAATTCCAGGGACAGGACAGTCTCATAATTCATCCTCATaGCTTCCCGGTAGAGGGCTTTTTGTTGCTCTGTCAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: GMGIPGTGQSHNSSS*LPGRGLFVALSELP
Trigger: GGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGGGAAGTCATGAGGATGAATTATGAGACTGTCCTGTCCCTGGAATTCCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS GCA 90 bp CGGGCTTGCCCAATCTGGAGTCCTAAAGTCAGATTCTTCATTTTCTaGAAAGGTTACTCCCTGGAGCCGCCACTCATCAGAATTAGGACA +
Preference number: 5 (lower is better)
Translates to: RACPIWSPKVRFFIF*KGYSLEPPLIRIRT
Trigger: TGTCCTAATTCTGATGAGTGGCGGCTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS GCA 90 bp GAAGGGCTGAGGTTGAGGAAAATGGGAGGTGGCATTCGTCGGGCTTaGCCAATCTGGAGTCCTAAAGTCAGATTCTTCATTTTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: EGLRLRKMGGGIRRA*PIWSPKVRFFIFCK
Trigger: TTTGCAGAAAATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCTCAGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 90 bp CTCCTCGTCCCTTTCCAACCGATTGATCATATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGACAGTCTCATAATTCATCCTCATGAC +
Preference number: 5 (lower is better)
Translates to: LLVPFQPIDHIWLGE*EFQGQDSLIIHPHD
Trigger: GTCATGAGGATGAATTATGAGACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 90 bp GGAGTCCTAAAGTCAGATTCTTCATTTTCTGCAAAGGTTACTCCCTaGAGCCGCCACTCATCAGAATTAGGACACTCCTCGTCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GVLKSDSSFSAKVTP*SRHSSELGHSSSLS
Trigger: GGAAAGGGACGAGGAGTGTCCTAATTCTGATGAGTGGCGGCTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCTGACTTTAGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGAGCTGTGGCTTCACTTaGCGCCAGTCTCGAACATTT +
Preference number: 5 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLSCGFT*RQSRTF
Trigger: AAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCT...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTAGCTGTGGCTTCACTTaGCGCCAGTCTCGAACATTT +
Preference number: 5 (lower is better)
Translates to: THTLTHTRCENVFSRKHLSCGFT*RQSRTF
Trigger: AAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCT...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CCAGATCAGCACAAAACACTCTTTGGAAAAGGCTGCTCCTTCCTGGTACACTGCCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: PDQHKTLFGKGCSFLVHCHGMSI*ELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATG...GCAGTGTACCAGGAAGGAGCAGCCTTTTCCAAAGAGTGTTTTGTGCTGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp TTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCGCAGGCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LHSEKSRSCVWNSDRLRRHGMSI*ELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATG...CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS CCA 90 bp GTACCCATGCGCCTTCTGAGCAGATTTGTACTTTCTGCATATCTATaGGGCCATCCTCCAACTCTTGGATCTCAACCTCTTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VPMRLLSRFVLSAYL*GHPPTLGSQPLPPF
Trigger: AAAAGGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGCCCCATAGATATGCAGAAAGTACAAATCTGCTCAGAAGGCGCATGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000127596.3
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 90 bp TTGGATATAGCAGAGAAGACAGACACTGATGAATGTCTCTGGGTTTaGAGAGTCCCAGAGACAAAGGAGAACAAGGCATTACCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LDIAEKTDTDECLWV*RVPETKENKALPRD
Trigger: GTCCCTGGGTAATGCCTTGTTCTCCTTTGTCTCTGGGACTCTCCAAACCCAGAGACATTCATCAGTGTCTGTCTTCTCTGCTATATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127596.3
CDS CCA 90 bp AGGTTGAGGAAAATGGGAGGTGGCATTCGTCGGGCTTGCCCAATCTaGAGTCCTAAAGTCAGATTCTTCATTTTCTGCAAAGGTTACTCC +
Preference number: 5 (lower is better)
Translates to: RLRKMGGGIRRACPI*SPKVRFFIFCKGYS
Trigger: GGAGTAACCTTTGCAGAAAATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTTTGATCATATCTGGCTaGGGGAATGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: THTLTHTRCENVFSRKHLLIISG*GNGNSR
Trigger: CCTGGAATTCCCATTCCCCAAGCCAGATATGATCAA...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTTGATCATATCTGGCTaGGGGAATGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: APDLSCFRFTLGSVFHASLIISG*GNGNSR
Trigger: CCTGGAATTCCCATTCCCCAAGCCAGATATGATCAA...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCATTGATCATATCTGGCTaGGGGAATGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPLIISG*GNGNSR
Trigger: CCTGGAATTCCCATTCCCCAAGCCAGATATGATCAA...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGCATGGCATGAGCATTTaGGAGCTGTGGCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLHGMSI*ELWLHF
Trigger: AAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATG...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS CCA 90 bp AGGAGATTGGATATAGCAGAGAAGACAGACACTGATGAATGTCTCTaGGTTTGGAGAGTCCCAGAGACAAAGGAGAACAAGGCATTACCC +
Preference number: 5 (lower is better)
Translates to: RRLDIAEKTDTDECL*VWRVPETKENKALP
Trigger: GGGTAATGCCTTGTTCTCCTTTGTCTCTGGGACTCTCCAAACCCAGAGACATTCATCAGTGTCTGTCTTCTCTGCTATATCCAATCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127596.3
CDS CCA 90 bp AGAATTAGGACACTCCTCGTCCCTTTCCAACCGATTGATCATATCTaGCTTGGGGAATGGGAATTCCAGGGACAGGACAGTCTCATAATT +
Preference number: 5 (lower is better)
Translates to: RIRTLLVPFQPIDHI*LGEWEFQGQDSLII
Trigger: AATTATGAGACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAGTGTCCTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGAAGCTGTACAAAGATCCTAACAACTGGAAGAGCAGACGTGGCATGTACCCAAACCTCTTCCTCCTTTaGCTCTTCTTTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: QKLYKDPNNWKSRRGMYPNLFLL*LFFQGQ
Trigger: TTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTT...TGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp ACACACACACTCACTCACACTCGGTGTGAGAACGTGTTCTCCAGAAAACACCTTAACCTCTTCCTCCTTTaGCTCTTCTTTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: THTLTHTRCENVFSRKHLNLFLL*LFFQGQ
Trigger: TTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTT...AAGGTGTTTTCTGGAGAACACGTTCTCACACCGAGTGTGAGTGAGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GACTGGTTACACAGTGAGAAATCACGGTCATGTGTGTGGAACTCTGACAGACTGAACCTCTTCCTCCTTTaGCTCTTCTTTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: DWLHSEKSRSCVWNSDRLNLFLL*LFFQGQ
Trigger: TTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTT...CAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGGCCATCCTCCAACTCTaGGATCTCAACCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLAILQL*DLNLFL
Trigger: GAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGC...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTTGTCGTAGAGGGCTTTTTGTaGCTCTGTCAGAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: QIYPVLGLHSGLSSMPVVVEGFL*LCQNFP
Trigger: TGGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTAC...GACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFQPRLA*NPFSGM
Trigger: CATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CAGCCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAG +
Preference number: 5 (lower is better)
Translates to: QPSSYKFSSQLFPSQFHFGFSPW*STVTLE
Trigger: CTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCC...AAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp GCTCCAGATCTATCCTGTTTTAGGTTTACACTCGGGTCTGTCTTCCATGCCAGTAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: APDLSCFRFTLGSVFHASNFQPV*HQVLSH
Trigger: ATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTT...ACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS CCA 90 bp TTTTCCATGCGCCTTCTGAGCAGATTTGTACTTTCTGCATATCTATaGGGCCATCCTCCAACTCTTGGATCTCAACCTCTTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: FSMRLLSRFVLSAYL*GHPPTLGSQPLPPF
Trigger: AAAAGGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGCCCCATAGATATGCAGAAAGTACAAATCTGCTCAGAAGGCGCATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148243.8
CDS-3UTR CAA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAAGCTGTGGCTTCACTTaGCGCCAGTCTCGAACATTT +
Preference number: 5 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLSCGFT*RQSRTF
Trigger: AAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCT...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCCAGCCCAGACTTGCCTaGAACCCTTTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: HFYSTFFLFDGHLCSHPFQPRLA*NPFSGM
Trigger: CATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTG...GAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp TCTGCAGCCCTTCAAAGTTCCAATTTAAAGACATCTTCCTTCAGATACCTGCTGGTAGAGGGCTTTTTGTaGCTCTGTCAGAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: SAALQSSNLKTSSFRYLLVEGFL*LCQNFP
Trigger: TGGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTAC...CAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCCCGGTAGAGGGCTTTTaGTTGCTCTGTCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: HFYSTFFLFDGHLCSHPFPVEGF*LLCQNF
Trigger: GAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGG...GAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAGTTGAAGGGCTGAGGTaGAGGAAAATGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLVEGLR*RKMGGG
Trigger: GCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAAC...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCTTGATCATATCTGGCTaGGGGAATGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: HFYSTFFLFDGHLCSHPFLIISG*GNGNSR
Trigger: CCTGGAATTCCCATTCCCCAAGCCAGATATGATCAA...GAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAGTGATAGGGTCCCCTTaGGCCTGCATGTATCTGACA +
Preference number: 5 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLVIGSP*ACMYLT
Trigger: TGTCAGATACATGCAGGCCAAAGGGGACCCTATCAC...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTAGGCTTTTCGCCCTGGTaGTCAACAGTCACTCTAGAG +
Preference number: 5 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLGFSPW*STVTLE
Trigger: CTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCC...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp TTACCTACAGAAAATCCATCTTCTGCACCAAGCCTGTGTCCCACTTGGTTATTAAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: LPTENPSSAPSLCPTWLLNFQPV*HQVLSH
Trigger: ATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTT...TAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp CCATCCTCTTACAAGTTTTCCTCCCAACTGTTTCCATCACAGTTCCATTTTCTGAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: PSSYKFSSQLFPSQFHFLNFQPV*HQVLSH
Trigger: ATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTT...CAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp AGCACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTAACCTCTTCCTCCTTTaGCTCTTCTTTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: STFIALSSCLTDTCVLTLNLFLL*LFFQGQ
Trigger: TTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTT...AAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp CACTTTTATAGCACTTTCTTCTTGTTTGACGGACACTTGTGTTCTCACCCTTTCAACTTCCAACCAGTCTaGCATCAAGTCCTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: HFYSTFFLFDGHLCSHPFNFQPV*HQVLSH
Trigger: ATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTT...GAAAGGGTGAGAACACAAGTGTCCGTCAAACAAGAAGAAAGTGCTATAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135673.8
CDS-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACCTTCGTCCTCTAAGTaGCTGGAGATGTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLPSSSK*LEMWHF
Trigger: AAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS-3UTR CAA 90 bp AGTCTGGATGTCTTTAACAAAGCAGTATACTATTCTGTAACAGGAGGTGGTTTACAGGACCACATTCTTTaGGCGGTTCTTTGGGCAACT +
Preference number: 5 (lower is better)
Translates to: SLDVFNKAVYYSVTGGGLQDHIL*AVLWAT
Trigger: AGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTG...TAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000169324.8
CDS TCA 72 bp TGTTGGTGCTCTCGGCGTACTCCACCACCATCAGCTTaGACCCTGCATCATAACTGCGGCGCATGCCACGAC +
Preference number: 6 (lower is better)
Translates to: CWCSRRTPPPSA*TLHHNCGACHD
Trigger: GTCGTGGCATGCGCCGCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGGAGTACGCCGAGAGCACCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS GCA 72 bp GCTCTCGGCGTACTCCACCACCATCAGCTTGAACCCTaGATCATAACTGCGGCGCATGCCACGACTGAACTG +
Preference number: 6 (lower is better)
Translates to: ALGVLHHHQLEP*IITAAHATTEL
Trigger: CAGTTCAGTCGTGGCATGCGCCGCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGGAGTACGCCGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 72 bp AGTCGTCAGCTGAGAGGTCATACCCGGGGAAGCCCATaGCCATATAGAAGGGGTAGCCCTCAGTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: SRQLRGHTRGSP*PYRRGSPQSTQ
Trigger: CTGAGTGGACTGAGGGCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCTGACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS TCA 72 bp ACGACTGAACTGAAACTTGCTCGCCAAGTCGTCAGCTaGGAGGTCATACCCGGGGAAGCCCATGGCCATATA +
Preference number: 6 (lower is better)
Translates to: TTELKLARQVVS*EVIPGEAHGHI
Trigger: TATATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCTGACGACTTGGCGAGCAAGTTTCAGTTCAGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS CAA 90 bp CGCCACTCATCAGAATTAGGACACTCCTCGTCCCTTTCCAACCGATaGATCATATCTGGCTTGGGGAATGGGAATTCCAGGGACAGGACA +
Preference number: 6 (lower is better)
Translates to: RHSSELGHSSSLSNR*IISGLGNGNSRDRT
Trigger: TGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAGTGTCCTAATTCTGATGAGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 72 bp ACACTCCTCGTCCCTTTCCAACCGATTGATCATATCTaGCTTGGGGAATGGGAATTCCAGGGACAGGACAGT +
Preference number: 6 (lower is better)
Translates to: TLLVPFQPIDHI*LGEWEFQGQDS
Trigger: ACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CAA 72 bp TCCTCGTCCCTTTCCAACCGATTGATCATATCTGGCTaGGGGAATGGGAATTCCAGGGACAGGACAGTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSLSNRLIISG*GNGNSRDRTVS
Trigger: TGAGACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS GCA 72 bp AGGTTGAGGAAAATGGGAGGTGGCATTCGTCGGGCTTaGCCAATCTGGAGTCCTAAAGTCAGATTCTTCATT +
Preference number: 6 (lower is better)
Translates to: RLRKMGGGIRRA*PIWSPKVRFFI
Trigger: AATGAAGAATCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS CAA 72 bp TCAGAATTAGGACACTCCTCGTCCCTTTCCAACCGATaGATCATATCTGGCTTGGGGAATGGGAATTCCAGG +
Preference number: 6 (lower is better)
Translates to: SELGHSSSLSNR*IISGLGNGNSR
Trigger: CCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAGTGTCCTAATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 72 bp CGCCTTCTGAGCAGATTTGTACTTTCTGCATATCTATaGGGCCATCCTCCAACTCTTGGATCTCAACCTCTT +
Preference number: 6 (lower is better)
Translates to: RLLSRFVLSAYL*GHPPTLGSQPL
Trigger: AAGAGGTTGAGATCCAAGAGTTGGAGGATGGCCCCATAGATATGCAGAAAGTACAAATCTGCTCAGAAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000127596.3
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000148243.8
ENSMUST00000169324.8
CDS CCA 72 bp AAGTCAGATTCTTCATTTTCTGCAAAGGTTACTCCCTaGAGCCGCCACTCATCAGAATTAGGACACTCCTCG +
Preference number: 6 (lower is better)
Translates to: KSDSSFSAKVTP*SRHSSELGHSS
Trigger: CGAGGAGTGTCCTAATTCTGATGAGTGGCGGCTCCAGGGAGTAACCTTTGCAGAAAATGAAGAATCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8
CDS CCA 72 bp CCTTTCCAACCGATTGATCATATCTGGCTTGGGGAATaGGAATTCCAGGGACAGGACAGTCTCATAATTCAT +
Preference number: 6 (lower is better)
Translates to: PFQPIDHIWLGE*EFQGQDSLIIH
Trigger: ATGAATTATGAGACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000128861.3
ENSMUST00000131487.8
ENSMUST00000135673.8
ENSMUST00000169324.8