Pregenerated sensors for POFUT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020260Ensembl transcript IDs: ENSMUST00000020493.9, ENSMUST00000218064.2, ENSMUST00000218117.2, ENSMUST00000219376.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTaGGACGGAGACCTGGCAGTAGCTGAGTGGGGGCTGCTCAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LGHGALSVLRVYLGA*DGDLAVAEWGLLSA Trigger: TGCACTGAGCAGCCCCCACTCAGCTACTGCCAGGTCTCCGTCCCAAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 90 bp | TGGCGTCTGTGGCCACGAACACCTTGTCCAGCTGATGAGTCTTCATaGGGCTGCGGATCTTCTTCACGGCGCCCTCCAGGCTGGGCACAT | + |
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Preference number: 1 (lower is better) Translates to: WRLWPRTPCPADESS*GCGSSSRRPPGWAH Trigger: ATGTGCCCAGCCTGGAGGGCGCCGTGAAGAAGATCCGCAGCCTCATGAAGACTCATCAGCTGGACAAGGTGTTCGTGGCCACAGACGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR GCA 90 bp | GGCTCAAACCTCACCATTTCCGGCAGCAGCTTCCTCAATTCTTCCTaGTCCTTCCTGATGGCGTCTGTGGCCACGAACACCTTGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GSNLTISGSSFLNSS*SFLMASVATNTLSS Trigger: GCTGGACAAGGTGTTCGTGGCCACAGACGCCATCAGGAAGGAGCAGGAAGAATTGAGGAAGCTGCTGCCGGAAATGGTGAGGTTTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR TCA 90 bp | GCATTGCCACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTaGGAGGCCTGTGTCGGAGCTGACAAATGTTCTTCTATTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: ALPQAGHAQLVQEGG*EACVGADKCSSISG Trigger: TCCAGAAATAGAAGAACATTTGTCAGCTCCGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTGGCAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 90 bp | GGGAAGGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTaGAGGCCATTTCCTTTACTTCTCAATTCTATTTCTCAGCGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GKGVIKQGRVSGVAF*RPFPLLLNSISQRV Trigger: CACACGCTGAGAAATAGAATTGAGAAGTAAAGGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR GCA 90 bp | TTTGAAGGCCATTTCCTTTACTTCTCAATTCTATTTCTCAGCGTGTaGAGTGAACCTGGGGGTCCATGTGAGGCGAGGAAGTCACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: FEGHFLYFSILFLSV*SEPGGPCEARKSLA Trigger: TGCCAGTGACTTCCTCGCCTCACATGGACCCCCAGGTTCACTGCACACGCTGAGAAATAGAATTGAGAAGTAAAGGAAATGGCCTTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTATCAGGGACCTGGGGGTaGCCTGGCCACGGCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLSGTWG*PGHGCA Trigger: AGCACAGCCGTGGCCAGGGCACCCCCAGGTCCCTGA...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGCCCGCATCCACACCTaGGGGCATTGCCACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLARIHT*GHCHRL Trigger: CAGCCTGTGGCAATGCCCTCAGGTGTGGATGCGGGC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGCTATTTCTCAGCGTGTaGAGTGAACCTGGGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: AGQLTGPRGPVCAQSLPWLFLSV*SEPGGP Trigger: TGGACCCCCAGGTTCACTGCACACGCTGAGAAATAG...CCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTTCCTGGGAGCCCCACAGGTaGAGGCTGAGGCAAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GCHKAGAGLRCGLLKAISWEPHR*RLRQGL Trigger: CAAGCCTTGCCTCAGCCTCCACCTGTGGGGCTCCCA...GGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAACTTGTTCAGGAAGGTaGCTGAGAGGCCTGTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLTCSGR*LRGLCR Trigger: CCGACACAGGCCTCTCAGCCACCTTCCTGAACAAGT...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTGGCATTGCCACAGGCTaGCCATGCTCAACTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SADWATGPCLCSESTLVLGIATG*PCSTCS Trigger: TGAACAAGTTGAGCATGGCCAGCCTGTGGCAATGCC...AAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTGAGAAGACACAGTTGTaGATCCTGAAGGTGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SADWATGPCLCSESTLVLEKTQL*ILKVAE Trigger: CTCTGCCACCTTCAGGATTCACAACTGTGTCTTCTC...AAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTTCCGCCACAGGCTGGCCATaGTCAACTTGTTCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GCHKAGAGLRCGLLKAISATGWP*STCSGR Trigger: CCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTGGC...GGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACGTGGGCTCAAACCTCACCATTTCCGGCAGCAGCTTCCTCAATTCTTCCTGGCACATCCTCCCTGTaGCCCCAGATGAAGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PTWAQTSPFPAAASSILPGTSSL*PQMKSF Trigger: GAAGGACTTCATCTGGGGCCACAGGGAGGATGTGCC...AGGAAGAATTGAGGAAGCTGCTGCCGGAAATGGTGAGGTTTGAGCCCACGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACGTGGGCTCAAACCTCACCATTTCCGGCAGCAGCTTCCTCAATTCTTCCTGTGCTGAGCCCAGTTTaGCAGGTCAGACATGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PTWAQTSPFPAAASSILPVLSPV*QVRHAS Trigger: GCTAGCATGTCTGACCTGTCAAACTGGGCTCAGCAC...AGGAAGAATTGAGGAAGCTGCTGCCGGAAATGGTGAGGTTTGAGCCCACGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGGCCTGTGTCGGAGCTaGCAAATGTTCTTCTATTTC | + |
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Preference number: 2 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLGLCRS*QMFFYF Trigger: GAAATAGAAGAACATTTGTCAGCTCCGACACAGGCC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAAACCTCACCATTTCCGGCAGCAGCTTCCTCAATTCTTCCTGCTCCTTCCTGCTGATGAGTCTTCATaGGGCTGCGGATCTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LKPHHFRQQLPQFFLLLPADESS*GCGSSS Trigger: TGAAGAAGATCCGCAGCCTCATGAAGACTCATCAGC...AGGAAGGAGCAGGAAGAATTGAGGAAGCTGCTGCCGGAAATGGTGAGGTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGATGTTCTTCTATTTCTaGACTAGCACACATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: HRLAMLNLFRKVAERPVSMFFYF*TSTHVT Trigger: TGTCACATGTGTGCTAGTCCAGAAATAGAAGAACAT...CGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR CAA 90 bp | AGGGAAGGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTaGAAGGCCATTTCCTTTACTTCTCAATTCTATTTCTCAGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: REGCHKAGAGLRCGL*KAISFTSQFYFSAC Trigger: ACACGCTGAGAAATAGAATTGAGAAGTAAAGGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR CCA 72 bp | GGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTaGGACGGAGACCTGGCAGTAGCTGAGTGGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GALSVLRVYLGA*DGDLAVAEWGL Trigger: CAGCCCCCACTCAGCTACTGCCAGGTCTCCGTCCCAAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 72 bp | CAGGAGGAAATTAGTGGGAGCCCCACAGGTGGAGGCTaGGGCAAGGCTTGGTGTCGGCTCACGCTGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: QEEISGSPTGGG*GKAWCRLTLAM Trigger: CATGGCCAGCGTGAGCCGACACCAAGCCTTGCCTCAGCCTCCACCTGTGGGGCTCCCACTAATTTCCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR CCA 72 bp | GTGGGAGCATGGGCTCTAGATGTGTTGCCTCCCATGTaGGGGCCTCCTCTGGGACCCTGTGACCGAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: VGAWALDVLPPM*GPPLGPCDRVI Trigger: AATCACTCGGTCACAGGGTCCCAGAGGAGGCCCCCACATGGGAGGCAACACATCTAGAGCCCATGCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 72 bp | TGGCCACGAACACCTTGTCCAGCTGATGAGTCTTCATaGGGCTGCGGATCTTCTTCACGGCGCCCTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: WPRTPCPADESS*GCGSSSRRPPG Trigger: GCCTGGAGGGCGCCGTGAAGAAGATCCGCAGCCTCATGAAGACTCATCAGCTGGACAAGGTGTTCGTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR CCA 72 bp | GAGCCCGCATCCACACCTGAGGGCATTGCCACAGGCTaGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: EPASTPEGIATG*PCSTCSGRWLR Trigger: TCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTGGCAATGCCCTCAGGTGTGGATGCGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CAA 90 bp | GCCCGAGTCGTTCCATCCAGGAGGAAATTAGTGGGAGCCCCACAGGTGGAGGCTCTGGCCATGCTCAACTaGTTCAGGAAGGTGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: ARVVPSRRKLVGAPQVEALAMLN*FRKVAE Trigger: CTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAG...AGCCTCCACCTGTGGGGCTCCCACTAATTTCCTCCTGGATGGAACGACTCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGCTCAGGTGTGGCCTTTaGAAGGCCATTTCCTTTACT | + |
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Preference number: 3 (lower is better) Translates to: AGQLTGPRGPVCAQSLPWLRCGL*KAISFT Trigger: AGTAAAGGAAATGGCCTTCAAAAGGCCACACCTGAG...CCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR GCA 72 bp | CTCACCATTTCCGGCAGCAGCTTCCTCAATTCTTCCTaGTCCTTCCTGATGGCGTCTGTGGCCACGAACACC | + |
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Preference number: 3 (lower is better) Translates to: LTISGSSFLNSS*SFLMASVATNT Trigger: GGTGTTCGTGGCCACAGACGCCATCAGGAAGGAGCAGGAAGAATTGAGGAAGCTGCTGCCGGAAATGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| 3UTR TCA 72 bp | CAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTaGGAGGCCTGTGTCGGAGCTGACAAATGTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QAGHAQLVQEGG*EACVGADKCSS Trigger: AGAAGAACATTTGTCAGCTCCGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 72 bp | TTCTCAGGTCCTGAGAGAAGACACAGTTGTGAATCCTaGAGGTGGCAGAGCCTAGACACAGGTAGATGTCGG | + |
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Preference number: 3 (lower is better) Translates to: FSGPERRHSCES*RWQSLDTGRCR Trigger: CCGACATCTACCTGTGTCTAGGCTCTGCCACCTTCAGGATTCACAACTGTGTCTTCTCTCAGGACCTGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR TCA 72 bp | TGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGGAGCTaGCAAATGTTCTTCTATTTCTGGACTAGCACACAT | + |
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Preference number: 3 (lower is better) Translates to: CSGRWLRGLCRS*QMFFYFWTSTH Trigger: ATGTGTGCTAGTCCAGAAATAGAAGAACATTTGTCAGCTCCGACACAGGCCTCTCAGCCACCTTCCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR GCA 72 bp | CATTTCCTTTACTTCTCAATTCTATTTCTCAGCGTGTaGAGTGAACCTGGGGGTCCATGTGAGGCGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: HFLYFSILFLSV*SEPGGPCEARK Trigger: CTTCCTCGCCTCACATGGACCCCCAGGTTCACTGCACACGCTGAGAAATAGAATTGAGAAGTAAAGGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| 3UTR CAA 72 bp | GCCCACGGACACGTGGGAGCATGGGCTCTAGATGTGTaGCCTCCCATGTGGGGGCCTCCTCTGGGACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: AHGHVGAWALDV*PPMWGPPLGPC Trigger: ACAGGGTCCCAGAGGAGGCCCCCACATGGGAGGCAACACATCTAGAGCCCATGCTCCCACGTGTCCGTGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | TCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTACAGGAGGTACCGTCTaGGGGATGCCGCCCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: SADWATGPCLCSESTLVLTGGTV*GMPPPT Trigger: TGTCGGGGGCGGCATCCCGCAGACGGTACCTCCTGT...AAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | GTGTTGCCTCCCATGTGGGGGCCTCCTCTGGGACCCTGTGACCGAGTGATTGGCAGCCCGCAAGTGCTTTaGAAACACCATGCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VLPPMWGPPLGPCDRVIGSPQVL*KHHAAP Trigger: CGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCT...GCCAATCACTCGGTCACAGGGTCCCAGAGGAGGCCCCCACATGGGAGGCAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | GGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTTCCGTACCGTCTGCGGGATaGCGCCCCCGACAGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: GCHKAGAGLRCGLLKAISVPSAG*RPRQDV Trigger: GACATCCTGTCGGGGGCGGCATCCCGCAGACGGTAC...GGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGTCAATACAGGGCCGTaGGTCCACCTTCTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLVNTGP*VHLLLP Trigger: TGGGAGGAGAAGGTGGACGCACGGCCCTGTATTGAC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | GGCGTCTGTGGCCACGAACACCTTGTCCAGCTGATGAGTCTTCATGAGGCTGCGAGCCCGCAAGTGCTTTaGAAACACCATGCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: GVCGHEHLVQLMSLHEAASPQVL*KHHAAP Trigger: CGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCT...CGCAGCCTCATGAAGACTCATCAGCTGGACAAGGTGTTCGTGGCCACAGACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGGAATCCGGACCTGGTaGATGTCAGGGCTTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLGIRTW*MSGLCQ Trigger: CTGGCAAAGCCCTGACATCCACCAGGTCCGGATTCC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR CCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACAGGGAATCCGGACCTaGTGGATGTCAGGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLQGIRT*WMSGLC Trigger: GCAAAGCCCTGACATCCACCAGGTCCGGATTCCCTG...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR CCA 90 bp | CACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGTGTAGGACGTACACCTaGTCGATAAAGGGCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: HRLAMLNLFRKVAERPVSCRTYT*SIKGPP Trigger: CGGCGGGCCCTTTATCGACCAGGTGTACGTCCTACA...CGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR TCA 90 bp | GGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTTCCAGATCCACTGATCGATaGTGGCGACGCCTCCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GCHKAGAGLRCGLLKAISRSTDR*WRRLRP Trigger: AGGACGGAGGCGTCGCCATCATCGATCAGTGGATCT...GGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | CCTTCCTTCTCAGGTGGACTCCGAGGTAGGGGCCGCCTAGTGCTGAGCCCAGTTTACTCATGCTTGTCCTaGGAGTACAGCAGAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSFSGGLRGRGRLVLSPVYSCLS*EYSRGS Trigger: TGACCCTCTGCTGTACTCGCAGGACAAGCATGAGTA...AACTGGGCTCAGCACTAGGCGGCCCCTACCTCGGAGTCCACCTGAGAAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
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| CDS-3UTR CCA 90 bp | GCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGGAGATTGAAGCCTTCTaGGGGGTTGACATCATACAG | + |
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Preference number: 4 (lower is better) Translates to: AGQLTGPRGPVCAQSLPWEIEAF*GVDIIQ Trigger: CTGTATGATGTCAACCCCCCAGAAGGCTTCAATCTC...CCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR CCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGTCGAGTTGAGGTGCTaGCTCCTAAACTCGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLVELRC*LLNSSP Trigger: GGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGAC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR CCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCAGCTCCTCCCACGTaGGCTCAAACCTCACCATTT | + |
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Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLPAPPT*AQTSPF Trigger: AAATGGTGAGGTTTGAGCCCACGTGGGAGGAGCTGG...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR TCA 90 bp | GCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGCGGGGATGTTTTTATTaGGACTCGGGAGGTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: AGQLTGPRGPVCAQSLPWRGCFY*DSGGQK Trigger: TTTTTGACCTCCCGAGTCTCAATAAAAACATCCCCG...CCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS-3UTR GCA 90 bp | TCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTCGTCTTCAGCAAGGATaGCACCCGGATATAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SADWATGPCLCSESTLVLRLQQG*HPDIDI Trigger: GATGTCTATATCCGGGTGGCATCCTTGCTGAAGACG...AAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTGGCACATCCTCCCTGTaGCCCCAGATGAAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGCHKAGAGLRCGLLKAIGTSSL*PQMKSF Trigger: GAAGGACTTCATCTGGGGCCACAGGGAGGATGTGCC...AATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTAGCTGATGAGTCTTCATaGGGCTGCGGATCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLADESS*GCGSSS Trigger: TGAAGAAGATCCGCAGCCTCATGAAGACTCATCAGC...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTTCTCAATTCTATTTCTCAGCGTGTGCAGTGAACCTGGGGGTCCATGTGCCGCCAGGATGCCGCTaGCAGCAGCAGGCAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSQFYFSACAVNLGVHVPPGCR*QQQADD Trigger: GTCGTCTGCCTGCTGCTGGCAGCGGCATCCTGGCGG...CACATGGACCCCCAGGTTCACTGCACACGCTGAGAAATAGAATTGAGAAGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR GCA 90 bp | CACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGTACTCATGCTTGTCCTaGGAGTACAGCAGAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLAMLNLFRKVAERPVSYSCLS*EYSRGS Trigger: TGACCCTCTGCTGTACTCGCAGGACAAGCATGAGTA...CGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGAGTCGTTCCATCCAGGAGGAAATTAGTGGGAGCCCCACAGGTGGAGGCTCAATCTTCCAGTGTGTaGGCTGCTCACATGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARVVPSRRKLVGAPQVEAQSSSV*AAHMLS Trigger: AGAAAGCATGTGAGCAGCCCACACACTGGAAGATTG...AGCCTCCACCTGTGGGGCTCCCACTAATTTCCTCCTGGATGGAACGACTCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGCTGGTCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTATTCCTCAATTCTTCCTaGTCCTTCCTGATGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILAGQLTGPRGPVCAQSLFLNSS*SFLMAS Trigger: AGACGCCATCAGGAAGGAGCAGGAAGAATTGAGGAA...TAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGACCAGCTAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTTGAAGGCCATTTCCTCACATGCTTTCTCCTaGTCTCCACAAAACCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCHKAGAGLRCGLLKAISSHAFS*SPQNRL Trigger: CAACCGGTTTTGTGGAGACCAGGAGAAAGCATGTGA...GGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCTCAATTCTATTTCTCAGCGTGTGCAGTGAACCTGGGGGTCCATGTGGGTTGTATGTTGTCTTaGGGTCCAACCCCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTSQFYFSACAVNLGVHVGCMLS*GPTPGS Trigger: AGATCCTGGGGTTGGACCCCAAGACAACATACAACC...CACATGGACCCCCAGGTTCACTGCACACGCTGAGAAATAGAATTGAGAAGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| 3UTR CAA 72 bp | TGTCATAAAGCAGGGGCGGGTCTCAGGTGTGGCCTTTaGAAGGCCATTTCCTTTACTTCTCAATTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHKAGAGLRCGL*KAISFTSQFYF Trigger: GAAATAGAATTGAGAAGTAAAGGAAATGGCCTTCAAAAGGCCACACCTGAGACCCGCCCCTGCTTTATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 90 bp | TACCGTCTGCGGGATGCCGCCCCCGACAGGATGTCCGCCGCCGACTaGCCAGGCCAGAATTCTTCTCCTGAAGCCGAGACCGGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YRLRDAAPDRMSAAD*PGQNSSPEAETGRQ Trigger: CTGGCGGCCGGTCTCGGCTTCAGGAGAAGAATTCTGGCCTGGCCAGTCGGCGGCGGACATCCTGTCGGGGGCGGCATCCCGCAGACGGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS TCA 90 bp | CGACAGGATGTCCGCCGCCGACTGGCCAGGCCAGAATTCTTCTCCTaGAGCCGAGACCGGCCGCCAGGATGCCGCTGCCAGCAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQDVRRRLARPEFFS*SRDRPPGCRCQQQA Trigger: TGCCTGCTGCTGGCAGCGGCATCCTGGCGGCCGGTCTCGGCTTCAGGAGAAGAATTCTGGCCTGGCCAGTCGGCGGCGGACATCCTGTCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS TCA 90 bp | AGCGTGGACCCAAGCACCTGGCATGAGCGCAGATCCACTGATCGATaGTGGCGACGCCTCCGTCCTTGTACAGCTCCAGCTCCTCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SVDPSTWHERRSTDR*WRRLRPCTAPAPPT Trigger: CGTGGGAGGAGCTGGAGCTGTACAAGGACGGAGGCGTCGCCATCATCGATCAGTGGATCTGCGCTCATGCCAGGTGCTTGGGTCCACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
||
| CDS GCA 90 bp | GCAGAGGGTCAATACAGGGCCGTGCGTCCACCTTCTCCTCCCAGGTaGCCTCCTTCCAGCCCTCGGCGTAACCTTGTAGGACGTACACCT | + |
|
Preference number: 5 (lower is better) Translates to: AEGQYRAVRPPSPPR*PPSSPRRNLVGRTP Trigger: AGGTGTACGTCCTACAAGGTTACGCCGAGGGCTGGAAGGAGGGCACCTGGGAGGAGAAGGTGGACGCACGGCCCTGTATTGACCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 ENSMUST00000219376.2 |
||
| CDS GCA 90 bp | GAGGTGCTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGCTTTaGAAACACCATGCTGCGCCGGGTATCCCAGTACTCCCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVLAPKLVSHSPQVL*KHHAAPGIPVLPAS Trigger: GGAGGCCGGGAGTACTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGGTGGATGTCAGGGCTTaGCCAGTGGTAGAGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRLAMLNLFRKVAERPVSVDVRA*PVVEAA Trigger: GGCCGCCTCTACCACTGGCAAAGCCCTGACATCCAC...CGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGACTGGGCCACGGGGCCCTGTCTGTGCTCAGAGTCTACCTTGGTGCTTCAGCCCGCAAGTGCTTaGCAAACACCATGCTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SADWATGPCLCSESTLVLQPASA*QTPCCA Trigger: GGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTG...AAGCACCAAGGTAGACTCTGAGCACAGACAGGGCCCCGTGGCCCAGTCAGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CAA 90 bp | GTGTTGCCTCCCATGTGGGGGCCTCCTCTGGGACCCTGTGACCGAGTGATTGGCCGGTTGTATGTTGTCTaGGGGTCCAACCCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLPPMWGPPLGPCDRVIGRLYVV*GSNPRI Trigger: GATCCTGGGGTTGGACCCCAAGACAACATACAACCG...GCCAATCACTCGGTCACAGGGTCCCAGAGGAGGCCCCCACATGGGAGGCAACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS GCA 90 bp | GAGTTGAGGTGCTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTaGTTTGCAAACACCATGCTGCGCCGGGTATCCCAGTACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELRCWLLNSSPTARK*FANTMLRRVSQYSR Trigger: CCGGGAGTACTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS TCA 90 bp | TCAGGTGGACTCCGAGGTAGGGGCCGCCTAGTGCTGAGCCCAGTTTaGCCTTCATCTTCGTCCAGTCTTCCTCCGGGGCCATCTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGLRGRGRLVLSPV*PSSSSSLPPGPSYQ Trigger: CTGATAAGATGGCCCCGGAGGAAGACTGGACGAAGATGAAGGTCAAACTGGGCTCAGCACTAGGCGGCCCCTACCTCGGAGTCCACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS GCA 90 bp | TCTTCCTCCGGGGCCATCTTATCAGCGGCATCCGTCGAGTTGAGGTaGTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSGAILSAASVELR*WLLNSSPTARKCFA Trigger: TGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGCCCCGGAGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS CCA 90 bp | GGATGCCACCCGGATATAGACATCCCTGCGGAGATTGAAGCCTTCTaGGGGGTTGACATCATACAGGAGGTACCGTCTGCGGGATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GCHPDIDIPAEIEAF*GVDIIQEVPSAGCR Trigger: GCGGCATCCCGCAGACGGTACCTCCTGTATGATGTCAACCCCCCAGAAGGCTTCAATCTCCGCAGGGATGTCTATATCCGGGTGGCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 90 bp | TCCTCCGGGGCCATCTTATCAGCGGCATCCGTCGAGTTGAGGTGCTaGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGCTTTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGAILSAASVELRC*LLNSSPTARKCFAN Trigger: GTTTGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGCCCCGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCACGTGGGCTCAAACCTCACCATTTCCGGCAGCAGCTTCCTCAATTCTCAGCCCGCAAGTGCTTaGCAAACACCATGCTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHVGSNLTISGSSFLNSQPASA*QTPCCA Trigger: GGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTG...AGAATTGAGGAAGCTGCTGCCGGAAATGGTGAGGTTTGAGCCCACGTGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218064.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGAGTCGTTCCATCCAGGAGGAAATTAGTGGGAGCCCCACAGGTGGAGGCTAGTGCTGAGCCCAGTTaGACCTTCATCTTCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARVVPSRRKLVGAPQVEASAEPS*TFIFVQ Trigger: CTGGACGAAGATGAAGGTCAAACTGGGCTCAGCACT...AGCCTCCACCTGTGGGGCTCCCACTAATTTCCTCCTGGATGGAACGACTCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 90 bp | CGGGACCGGTGTACAGCACAGAGGAAAGCAATGAAACTTTCTAAATaGGGACAGAGAGAGTGGACGGCCACAACCACCTGCCCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RDRCTAQRKAMKLSK*GQREWTATTTCPGC Trigger: GCAGCCAGGGCAGGTGGTTGTGGCCGTCCACTCTCTCTGTCCCCATTTAGAAAGTTTCATTGCTTTCCTCTGTGCTGTACACCGGTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGAGTCGTTCCATCCAGGAGGAAATTAGTGGGAGCCCCACAGGTGGAGGCTTCTCCACAAAACCGGTaGTATGTTGTCTTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARVVPSRRKLVGAPQVEASPQNR*YVVLGS Trigger: GGACCCCAAGACAACATACAACCGGTTTTGTGGAGA...AGCCTCCACCTGTGGGGCTCCCACTAATTTCCTCCTGGATGGAACGACTCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 90 bp | CAGTACGCAATCTTCCAGTGTGTGGGCTGCTCACATGCTTTCTCCTaGTCTCCACAAAACCGGTTGTATGTTGTCTTGGGGTCCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: QYAIFQCVGCSHAFS*SPQNRLYVVLGSNP Trigger: GGGGTTGGACCCCAAGACAACATACAACCGGTTTTGTGGAGACCAGGAGAAAGCATGTGAGCAGCCCACACACTGGAAGATTGCGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTGGCCATGCTCAACTTGTTCAGGAAGGTGGCTGAGAGGCCTGTGTCGACGGGGATGTTTTTATaGAGACTCGGGAGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HRLAMLNLFRKVAERPVSTGMFL*RLGRSK Trigger: TTTTGACCTCCCGAGTCTCAATAAAAACATCCCCGT...CGACACAGGCCTCTCAGCCACCTTCCTGAACAAGTTGAGCATGGCCAGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS GCA 72 bp | GGGGTTGACATCATACAGGAGGTACCGTCTGCGGGATaGCGCCCCCGACAGGATGTCCGCCGCCGACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVDIIQEVPSAG*RPRQDVRRRLA Trigger: GGCCAGTCGGCGGCGGACATCCTGTCGGGGGCGGCATCCCGCAGACGGTACCTCCTGTATGATGTCAACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 72 bp | CGGGATGCCGCCCCCGACAGGATGTCCGCCGCCGACTaGCCAGGCCAGAATTCTTCTCCTGAAGCCGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RDAAPDRMSAAD*PGQNSSPEAET Trigger: GGTCTCGGCTTCAGGAGAAGAATTCTGGCCTGGCCAGTCGGCGGCGGACATCCTGTCGGGGGCGGCATCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CAA 72 bp | GGACCAGGGAATCCGGACCTGGTGGATGTCAGGGCTTaGCCAGTGGTAGAGGCGGCCCCACGGGGGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GPGNPDLVDVRA*PVVEAAPRGQD Trigger: GTCCTGCCCCCGTGGGGCCGCCTCTACCACTGGCAAAGCCCTGACATCCACCAGGTCCGGATTCCCTGGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS TCA 72 bp | AGAGAGTGGACGGCCACAACCACCTGCCCTGGCTGCTaGGTACTGGGGCAACGGGGACCTCTGAGAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: REWTATTTCPGC*VLGQRGPLRAA Trigger: CGCTGCTCTCAGAGGTCCCCGTTGCCCCAGTACTCAGCAGCCAGGGCAGGTGGTTGTGGCCGTCCACTCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
||
| CDS CCA 72 bp | GGGACAGAGAGAGTGGACGGCCACAACCACCTGCCCTaGCTGCTGAGTACTGGGGCAACGGGGACCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTERVDGHNHLP*LLSTGATGTSE Trigger: CTCAGAGGTCCCCGTTGCCCCAGTACTCAGCAGCCAGGGCAGGTGGTTGTGGCCGTCCACTCTCTCTGTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
||
| CDS TCA 72 bp | CTCCGAGGTAGGGGCCGCCTAGTGCTGAGCCCAGTTTaGCCTTCATCTTCGTCCAGTCTTCCTCCGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRGRGRLVLSPV*PSSSSSLPPGP Trigger: TGGCCCCGGAGGAAGACTGGACGAAGATGAAGGTCAAACTGGGCTCAGCACTAGGCGGCCCCTACCTCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS GCA 72 bp | CGTCTCCCACAGCCCGCAAGTGCTTTGCAAACACCATaGTGCGCCGGGTATCCCAGTACTCCCGGCCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RLPQPASALQTP*CAGYPSTPGLH Trigger: ATGGAGGCCGGGAGTACTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS CAA 90 bp | GTCCAGTCTTCCTCCGGGGCCATCTTATCAGCGGCATCCGTCGAGTaGAGGTGCTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQSSSGAILSAASVE*RCWLLNSSPTARKC Trigger: GCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGCCCCGGAGGAAGACTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS TCA 72 bp | CTCCGAGGTAGGGGCCGCCTAGTGCTGAGCCCAGTTTaGCATCCCAGTACTCCCGGCCTCCATAGTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRGRGRLVLSPV*HPSTPGLHSGH Trigger: ATGACCACTATGGAGGCCGGGAGTACTGGGATGTCAAACTGGGCTCAGCACTAGGCGGCCCCTACCTCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219376.2 |
||
| CDS GCA 72 bp | CTCCCACAGCCCGCAAGTGCTTTGCAAACACCATGCTaGGCCGGGTATCCCAGTACTCCCGGCCTCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPQPASALQTPC*AGYPSTPGLHS Trigger: ACTATGGAGGCCGGGAGTACTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS GCA 72 bp | GGGGCCATCTTATCAGCGGCATCCGTCGAGTTGAGGTaGTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GAILSAASVELR*WLLNSSPTARK Trigger: CTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS CAA 72 bp | TCCTCCGGGGCCATCTTATCAGCGGCATCCGTCGAGTaGAGGTGCTGGCTCCTAAACTCGTCTCCCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGAILSAASVE*RCWLLNSSPTA Trigger: GGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGCCCCGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS TCA 72 bp | CCAAGCACCTGGCATGAGCGCAGATCCACTGATCGATaGTGGCGACGCCTCCGTCCTTGTACAGCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSTWHERRSTDR*WRRLRPCTAPA Trigger: AGCTGGAGCTGTACAAGGACGGAGGCGTCGCCATCATCGATCAGTGGATCTGCGCTCATGCCAGGTGCTTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
||
| CDS GCA 72 bp | TGCTGGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTaGTTTGCAAACACCATGCTGCGCCGGGTATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CWLLNSSPTARK*FANTMLRRVSQ Trigger: CTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS CCA 72 bp | GCCATCTTATCAGCGGCATCCGTCGAGTTGAGGTGCTaGCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AILSAASVELRC*LLNSSPTARKC Trigger: GCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGCCAGCACCTCAACTCGACGGATGCCGCTGATAAGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS GCA 72 bp | GCTCCTAAACTCGTCTCCCACAGCCCGCAAGTGCTTTaGAAACACCATGCTGCGCCGGGTATCCCAGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: APKLVSHSPQVL*KHHAAPGIPVL Trigger: GAGTACTGGGATACCCGGCGCAGCATGGTGTTTGCAAAGCACTTGCGGGCTGTGGGAGACGAGTTTAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020493.9 ENSMUST00000218064.2 |
||
| CDS CCA 72 bp | CCGGATATAGACATCCCTGCGGAGATTGAAGCCTTCTaGGGGGTTGACATCATACAGGAGGTACCGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PDIDIPAEIEAF*GVDIIQEVPSA Trigger: CGCAGACGGTACCTCCTGTATGATGTCAACCCCCCAGAAGGCTTCAATCTCCGCAGGGATGTCTATATCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS CCA 72 bp | ATCTTCCAGTGTGTGGGCTGCTCACATGCTTTCTCCTaGTCTCCACAAAACCGGTTGTATGTTGTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IFQCVGCSHAFS*SPQNRLYVVLG Trigger: CCCCAAGACAACATACAACCGGTTTTGTGGAGACCAGGAGAAAGCATGTGAGCAGCCCACACACTGGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
||
| CDS GCA 72 bp | TCAGTACGCAATCTTCCAGTGTGTGGGCTGCTCACATaGTTTCTCCTGGTCTCCACAAAACCGGTTGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: SVRNLPVCGLLT*FLLVSTKPVVC Trigger: ACATACAACCGGTTTTGTGGAGACCAGGAGAAAGCATGTGAGCAGCCCACACACTGGAAGATTGCGTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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| CDS CCA 72 bp | TGTACAGCACAGAGGAAAGCAATGAAACTTTCTAAATaGGGACAGAGAGAGTGGACGGCCACAACCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: CTAQRKAMKLSK*GQREWTATTTC Trigger: GCAGGTGGTTGTGGCCGTCCACTCTCTCTGTCCCCATTTAGAAAGTTTCATTGCTTTCCTCTGTGCTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218117.2 |
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| CDS GCA 72 bp | TGGTCGATAAAGGGCCCGCCGGACTCTGCAATGAACTaGTCATACTCTATAACGGGGATGTTTTTATTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WSIKGPPDSAMN*SYSITGMFLLR Trigger: TCTCAATAAAAACATCCCCGTTATAGAGTATGAGCAGTTCATTGCAGAGTCCGGCGGGCCCTTTATCGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020493.9 |
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