Pregenerated sensors for PODXL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025608Ensembl transcript IDs: ENSMUST00000026698.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTaGGTGTGCTCAGGCACAGCCATCGGGCCCTTGGGGTTTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: AHLPLLTCTWEHKSC*VCSGTAIGPLGFAA Trigger: AGCTGCAAACCCCAAGGGCCCGATGGCTGTGCCTGAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR TCA 90 bp | GCTGCTATTGTCCCTTGTGTTCTCCCAGCCCCTCCAGGGTCATCGTaGGGAAGGCTGGCGGTCTCCTATAACCTTGTACCTAGAAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: AAIVPCVLPAPPGSS*GRLAVSYNLVPRSC Trigger: GCAACTTCTAGGTACAAGGTTATAGGAGACCGCCAGCCTTCCTCACGATGACCCTGGAGGGGCTGGGAGAACACAAGGGACAATAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR GCA 90 bp | TCCCTGTTCTTGAGAAACACGCAGCACAGGGTGGGCAGTGTGGGATaGGTGTTTTCCTCTTGTCCCTGTCCCTGGGGAGACTCTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLFLRNTQHRVGSVG*VFSSCPCPWGDSLC Trigger: ACACAAAGAGTCTCCCCAGGGACAGGGACAAGAGGAAAACACGCATCCCACACTGCCCACCCTGTGCTGCGTGTTTCTCAAGAACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR GCA 90 bp | GGTTTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATaGCACAAAGCACACCAGACACAAAAGCCTGGCTCCGTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GFMFPERPSEMGQLE*HKAHQTQKPGSVLG Trigger: TCCCAGCACGGAGCCAGGCTTTTGTGTCTGGTGTGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR GCA 90 bp | GGTCTGTCAAATGGCCTTGCCCCATTGAGAAGAAGAAATCCTGTCTaGCTCTCGGACCATGACAGAATGAACCCACTGGGTGGCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: GLSNGLAPLRRRNPV*LSDHDRMNPLGGRT Trigger: GGTTCTGCCACCCAGTGGGTTCATTCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR GCA 90 bp | CACAGGCTGTTCTACACAGGGCTTCTCCCCCTCTGCCTTCATCTATaGAGTCCCTTTGAGCCTCATTCTGCTGGACATTCCTCAAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: HRLFYTGLLPLCLHL*SPFEPHSAGHSSRS Trigger: ACTCCTTGAGGAATGTCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAGCCCTGTGTAGAACAGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | GTGCAAACCGATGGAATTAGCTCACAGTCTCCACGATCTGAGCTTTaGCCTTTGGCAGTAAGGAGCTGGCGCACACACACACAACACACC | + |
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Preference number: 1 (lower is better) Translates to: VQTDGISSQSPRSEL*PLAVRSWRTHTQHT Trigger: GGTGTGTTGTGTGTGTGTGCGCCAGCTCCTTACTGCCAAAGGCCAAAGCTCAGATCGTGGAGACTGTGAGCTAATTCCATCGGTTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | TCCCTTGTGTTCTCCCAGCCCCTCCAGGGTCATCGTGAGGAAGGCTaGCGGTCTCCTATAACCTTGTACCTAGAAGTTGCAGTCCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: SLVFSQPLQGHREEG*RSPITLYLEVAVLN Trigger: ATTAAGGACTGCAACTTCTAGGTACAAGGTTATAGGAGACCGCCAGCCTTCCTCACGATGACCCTGGAGGGGCTGGGAGAACACAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR TCA 90 bp | CCTTGCCCCATTGAGAAGAAGAAATCCTGTCTGCCTCTCGGACCATaGCAGAATGAACCCACTGGGTGGCAGAACCTAATGCAGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: PCPIEKKKSCLPLGP*QNEPTGWQNLMQGS Trigger: TGATCCCTGCATTAGGTTCTGCCACCCAGTGGGTTCATTCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | AAGGCTACACAATTTGAGTGCACAAGAAGGAACACTGGGCCAGTCTaGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTATCTGT | + |
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Preference number: 1 (lower is better) Translates to: KATQFECTRRNTGPV*SEPWLFLQPRHTIC Trigger: ACAGATAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGTTCCTTCTTGTGCACTCAAATTGTGTAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | ATGCTTATTTACACCTCGGACCACATGATTCCAGAGCCCCAAATATaGCTGCTATTGTCCCTTGTGTTCTCCCAGCCCCTCCAGGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: MLIYTSDHMIPEPQI*LLLSLVFSQPLQGH Trigger: ATGACCCTGGAGGGGCTGGGAGAACACAAGGGACAATAGCAGCCATATTTGGGGCTCTGGAATCATGTGGTCCGAGGTGTAAATAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR TCA 90 bp | GCCGTAAGAGCAAGTGAAGGCCAGGTAATAAAAGGCTACACAATTTaGGTGCACAAGAAGGAACACTGGGCCAGTCTGGTCAGAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: AVRASEGQVIKGYTI*VHKKEHWASLVRAM Trigger: CATGGCTCTGACCAGACTGGCCCAGTGTTCCTTCTTGTGCACTCAAATTGTGTAGCCTTTTATTACCTGGCCTTCACTTGCTCTTACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | TTGGTTTTCTTTTCCAGCCTGCCCACCTGCAAGTGTCTTGTGCCTTaGGGAATGGGCACAGATGAACACAGTAGTGTGTCTGGATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LVFFSSLPTCKCLVP*GMGTDEHSSVSGCN Trigger: ATTGCATCCAGACACACTACTGTGTTCATCTGTGCCCATTCCCCAAGGCACAAGACACTTGCAGGTGGGCAGGCTGGAAAAGAAAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | TTTGAGTGCACAAGAAGGAACACTGGGCCAGTCTGGTCAGAGCCATaGCTGTTCCTCCAGCCCAGACACACTATCTGTTGTCTAATATTA | + |
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Preference number: 1 (lower is better) Translates to: FECTRRNTGPVWSEP*LFLQPRHTICCLIL Trigger: TAATATTAGACAACAGATAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGTTCCTTCTTGTGCACTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR GCA 90 bp | TTAAAACTGCACAATCTGGGCCTTTCTCCATGTGGCAAAGGAGGGTaGAAACCGATGGAATTAGCTCACAGTCTCCACGATCTGAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LKLHNLGLSPCGKGG*KPMELAHSLHDLSF Trigger: AAAGCTCAGATCGTGGAGACTGTGAGCTAATTCCATCGGTTTGCACCCTCCTTTGCCACATGGAGAAAGGCCCAGATTGTGCAGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | GGGATACAACAAGCTAGCCGAGGCCATGTTATAGGAGATGGAAATTaGGGACCTGTCCTTGAGACCATAGAGGCTTGGTTTTCTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GIQQASRGHVIGDGN*GPVLETIEAWFSFP Trigger: TGGAAAAGAAAACCAAGCCTCTATGGTCTCAAGGACAGGTCCCCAATTTCCATCTCCTATAACATGGCCTCGGCTAGCTTGTTGTATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CCA 90 bp | AAATCTGTGACCAGTTTGCAGAAAAAGCATTTGCGGTCTGTCAAATaGCCTTGCCCCATTGAGAAGAAGAAATCCTGTCTGCCTCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: KSVTSLQKKHLRSVK*PCPIEKKKSCLPLG Trigger: TCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTTTTCTGCAAACTGGTCACAGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCATCAGAGCATGAGATGCCTTTGCCTGCCCACCCACCCCTTAGGCAGAAGAGGGTGCCGTTCCTaGAGGAGCTCCAGAGACTCG | + |
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Preference number: 2 (lower is better) Translates to: GSHQSMRCLCLPTHPLGRRGCRS*RSSRDS Trigger: CGAGTCTCTGGAGCTCCTCCAGGAACGGCACCCTCT...TCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTAAAAAGCCTGGCTCCGTaGTGGGAGAGTAGGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLKSLAP*WESRPR Trigger: CCTTGGCCTACTCTCCCAGCACGGAGCCAGGCTTTT...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTATCTCCATCTTCCTCCTaGCTTCCTGCTCTGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLSPSSS*LPALGS Trigger: TGAGCCCAGAGCAGGAAGGCAGGAGGAAGATGGAGA...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | TCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCAGCATGAGATGCCTTTaGCTGCCCACCCACCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SPASLDMHVGAQELLGVLSMRCL*LPTHPL Trigger: TAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCT...GAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTACAGAAATGGGACAGCTaGAATGCCACAAAGCACACC | + |
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Preference number: 2 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLQKWDS*NATKHT Trigger: GGTGTGCTTTGTGGCATTCCAGCTGTCCCATTTCTG...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CAA 90 bp | GCCATGAGGAAGCTATTGGGGAAGCCATCAGAGCATGAGATGCCTTaGCCTGCCCACCCACCCCTTAGGCAGACTCCATTAGATAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AMRKLLGKPSEHEMP*PAHPPLRQTPLDSE Trigger: CTCACTATCTAATGGAGTCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCCCCAATAGCTTCCTCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR CAA 90 bp | TACACCTCGGACCACATGATTCCAGAGCCCCAAATATGGCTGCTATaGTCCCTTGTGTTCTCCCAGCCCCTCCAGGGTCATCGTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YTSDHMIPEPQIWLL*SLVFSQPLQGHREE Trigger: TTCCTCACGATGACCCTGGAGGGGCTGGGAGAACACAAGGGACAATAGCAGCCATATTTGGGGCTCTGGAATCATGTGGTCCGAGGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTAAGAAGAAATCCTGTCTaGCTCTCGGACCATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLRRNPV*LSDHDR Trigger: TCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTCT...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTAGAGACCATAGAGGCTTaGTTTTCTTTTCCAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLETIEA*FSFPAC Trigger: GCAGGCTGGAAAAGAAAACCAAGCCTCTATGGTCTC...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATTGGGGACCTGTCCTTaGGACCATAGAGGCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGLGTCP*DHRGLV Trigger: AACCAAGCCTCTATGGTCTCAAGGACAGGTCCCCAA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAAGTGGGCAGTGTGGGATaGGTGTTTTCCTCTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKVGSVG*VFSSCP Trigger: GGGACAAGAGGAAAACACGCATCCCACACTGCCCAC...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGACCACGATCTGAGCTTTaGCCTTTGGCAGTAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGPRSEL*PLAVRS Trigger: GCTCCTTACTGCCAAAGGCCAAAGCTCAGATCGTGG...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCAGGCTGTGTGGCCCCGTaGAAGTCACCTGACCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FMFPERPSEMGQLECHKAGCVAP*KSPDLL Trigger: TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCC...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGAGCCAGAGGAGATTTTTaGGAAGTGTCTTCTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGARGDF*EVSSRE Trigger: CTCCCTAGAAGACACTTCTCAAAAATCTCCTCTGGC...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCATATGAGATGAGAGGGTaGCGTTCCTGGAGGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FMFPERPSEMGQLECHKAYEMRG*RSWRSS Trigger: GGAGCTCCTCCAGGAACGGCACCCTCTCATCTCATA...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAACCAGAGCCCCAAATATaGCTGCTATTGTCCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKPEPQI*LLLSLV Trigger: CACAAGGGACAATAGCAGCCATATTTGGGGCTCTGG...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCACCCGTGCAAGTCACCTaGCCTCTTAAGGCCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TNPVLGTRHGFMFPERPSPVQVT*PLKASV Trigger: AACTGAGGCCTTAAGAGGTCAGGTGACTTGCACGGG...TGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATTTTTCAAGCTCCTGTaGAACTCACTAGGAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGFFKLL*NSLGAF Trigger: GAAGGCTCCTAGTGAGTTTCACAGGAGCTTGAAAAA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTAAATGGCACTTTGGGTaGTCTGGAGCTCTGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPKWHFG*SGALQC Trigger: GCACTGCAGAGCTCCAGACCACCCAAAGTGCCATTT...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTCAATCAGGGACCAGTTaGGACCCCAGGACATATCTG | + |
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Preference number: 2 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPQSGTS*DPRTYL Trigger: CAGATATGTCCTGGGGTCCCAACTGGTCCCTGATTG...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCACACAAGAAGGAACACTaGGCCAGTCTGGTCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RSGEGGLAISHSYQIFTPHKKEH*ASLVRA Trigger: GGCTCTGACCAGACTGGCCCAGTGTTCCTTCTTGTG...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCACAGAATCAGCTGCCATaGGGAAGCTATTGGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: TNPVLGTRHGFMFPERPSQNQLP*GSYWGS Trigger: GCTTCCCCAATAGCTTCCTCATGGCAGCTGATTCTG...TGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAATTCCTCCTGCCTTCCTaGTCTGGGCTCAGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LFVSSDVISCRETRLYLQFLLPS*SGLRHK Trigger: CTTGTGCCTGAGCCCAGAGCAGGAAGGCAGGAGGAA...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCAGTCCAAATGGCACTTTaGGTGGTCTGGAGCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TNPVLGTRHGFMFPERPSVQMAL*VVWSSA Trigger: TGCAGAGCTCCAGACCACCCAAAGTGCCATTTGGAC...TGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTCTTTCTGTCTTCAGGTaGGAAGATTTCCCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPLSVFR*EDFPLP Trigger: AGGGAGGGGGAAATCTTCCCACCTGAAGACAGAAAG...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAACCATGTTATAGGAGATaGAAATTGGGGACCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKPCYRR*KLGTCP Trigger: AGGACAGGTCCCCAATTTCCATCTCCTATAACATGG...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATCCCTGAGCTTCCTGTaGAATAATAATAATGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGSLSFL*NNNNAW Trigger: CCAGGCATTATTATTATTCCACAGGAAGCTCAGGGA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTAAGCTCTCAGCAACTTaGAAAGTCCCTGAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPKLSAT*KVPELP Trigger: AGGAAGCTCAGGGACTTTTCAAGTTGCTGAGAGCTT...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCAATGGGACAGCTGGAATaGCACAAAGCACACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: RSGEGGLAISHSYQIFTPMGQLE*HKAHQT Trigger: TGTCTGGTGTGCTTTGTGGCATTCCAGCTGTCCCAT...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCAAAGTGTCTTGTGCCTTaGGGAATGGGCACAGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: FMFPERPSEMGQLECHKAKCLVP*GMGTDE Trigger: TTCATCTGTGCCCATTCCCCAAGGCACAAGACACTT...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAATTCTCAACTCCAGCCTaGACTGCAGTAGGACTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: LFVSSDVISCRETRLYLQFSTPA*TAVGLR Trigger: TCGCAGTCCTACTGCAGTTCAGGCTGGAGTTGAGAA...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCACAGTACAGAATCAGCTaGCATGAGGAAGCTATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RSGEGGLAISHSYQIFTPQYRIS*HEEAIG Trigger: CCCAATAGCTTCCTCATGGCAGCTGATTCTGTACTG...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 90 bp | CAGACTGTAGGGTTGAAATCTGTGACCAGTTTGCAGAAAAAGCATTaGCGGTCTGTCAAATGGCCTTGCCCCATTGAGAAGAAGAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: QTVGLKSVTSLQKKH*RSVKWPCPIEKKKS Trigger: GGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTTTTCTGCAAACTGGTCACAGATTTCAACCCTACAGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCACATTTGCCACTGAAATaGAGAGCTCTGGTTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RSGEGGLAISHSYQIFTPHLPLK*RALVSL Trigger: AAGAGAAACCAGAGCTCTTCATTTCAGTGGCAAATG...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTaGGTGTGCTCAGGCACAGCCATCGGGCCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLLTCTWEHKSC*VCSGTAIGPLG Trigger: CCCCAAGGGCCCGATGGCTGTGCCTGAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | GCTGCTGGGTGTGCTCAGGCACAGCCATCGGGCCCTTaGGGTTTGCAGCTAGGGGAGAACCATTTGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: AAGCAQAQPSGP*GLQLGENHLPL Trigger: CAGTGGCAAATGGTTCTCCCCTAGCTGCAAACCCCAAGGGCCCGATGGCTGTGCCTGAGCACACCCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCACAGCCATCGGGCCCTaGGGGTTTGCAGCTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPASLDMHVGAQELLGVLTAIGP*GFAARG Trigger: TCCCCTAGCTGCAAACCCCAAGGGCCCGATGGCTGT...GAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | TTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTaGTCAGGCACAGCCATCGGGCCCTTGGGGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTCTWEHKSCWV*SGTAIGPLGFA Trigger: TGCAAACCCCAAGGGCCCGATGGCTGTGCCTGAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | GTGCCCCATGCTCACCTGCCTCTCTTGACATGCACGTaGGAGCACAAGAGCTGCTGGGTGTGCTCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VPHAHLPLLTCT*EHKSCWVCSGT Trigger: TGTGCCTGAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGAGCATGGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGGGCCAGTCTGGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACACACTAAGCTCTGCAGTGCAGTaGGGGTGGCCAGCAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLGQSGQSHGCSSSPDTLSSAVQ*GWPADR Trigger: TCTGTCTGCTGGCCACCCCAACTGCACTGCAGAGCT...TAGTGTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | CAGACTGCTCAGTGCCCCATGCTCACCTGCCTCTCTTaGCATGCACGTGGGAGCACAAGAGCTGCTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QTAQCPMLTCLS*HARGSTRAAGC Trigger: ACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGAGCATGGGGCACTGAGCAGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | TGCTCAGTGCCCCATGCTCACCTGCCTCTCTTGACATaGACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSVPHAHLPLLT*TWEHKSCWVCS Trigger: TGAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGAGCATGGGGCACTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAATGGCCAGTGGTGGGTTaGCGGCAGACCGAGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKWPVVG*RQTEGS Trigger: GCTTCCCTCGGTCTGCCGCAAACCCACCACTGGCCA...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GTCCCTTGTGTTCTCCCAGCCCCTCCAGGGTCATCGTaGGGAAGGCTGGCGGTCTCCTATAACCTTGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VPCVLPAPPGSS*GRLAVSYNLVP Trigger: AGGTACAAGGTTATAGGAGACCGCCAGCCTTCCTCACGATGACCCTGGAGGGGCTGGGAGAACACAAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CATCATCACTATGCTGGGCCCTCGCAACCTTGGACATaGCTGCCTGACACCGCTGAGCCTGGACAAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HHHYAGPSQPWT*LPDTAEPGQIL Trigger: CAGGATTTGTCCAGGCTCAGCGGTGTCAGGCAGCCATGTCCAAGGTTGCGAGGGCCCAGCATAGTGATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | GAAACCCATCATCACTATGCTGGGCCCTCGCAACCTTaGACATGGCTGCCTGACACCGCTGAGCCTGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETHHHYAGPSQP*TWLPDTAEPGQ Trigger: TTGTCCAGGCTCAGCGGTGTCAGGCAGCCATGTCCAAGGTTGCGAGGGCCCAGCATAGTGATGATGGGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | ACAGAAAGGCCCCCACAAAACAGTGATCCTGGCCAGTaGTGGGTTTGCGGCAGACCGAGGGAAGCATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TERPPQNSDPGQ*WVCGRPREASD Trigger: GTCTGATGCTTCCCTCGGTCTGCCGCAAACCCACCACTGGCCAGGATCACTGTTTTGTGGGGGCCTTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | CTCCAGAGACTCGCATGGCGTTCTCCATCTTCCTCCTaGCTTCCTGCTCTGGGCTCAGGCACAAGTAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LQRLAWRSPSSS*LPALGSGTSRL Trigger: TAACCTACTTGTGCCTGAGCCCAGAGCAGGAAGGCAGGAGGAAGATGGAGAACGCCATGCGAGTCTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATCTGAGCTTTGGCCTTaGGCAGTAAGGAGCTGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGSELWP*AVRSWR Trigger: GCGCCAGCTCCTTACTGCCAAAGGCCAAAGCTCAGA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TCTTCAGGTGGGAAGATTTCCCCCTCCCTGTCCAAATaGCACTTTGGGTGGTCTGGAGCTCTGCAGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSGGKISPSLSK*HFGWSGALQCS Trigger: ACTGCACTGCAGAGCTCCAGACCACCCAAAGTGCCATTTGGACAGGGAGGGGGAAATCTTCCCACCTGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CAATTTGAGTGCACAAGAAGGAACACTGGGCCAGTCTaGTCAGAGCCATGGCTGTTCCTCCAGCCCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: QFECTRRNTGPV*SEPWLFLQPRH Trigger: GTGTCTGGGCTGGAGGAACAGCCATGGCTCTGACCAGACTGGCCCAGTGTTCCTTCTTGTGCACTCAAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TTCTCCCAGCCCCTCCAGGGTCATCGTGAGGAAGGCTaGCGGTCTCCTATAACCTTGTACCTAGAAGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FSQPLQGHREEG*RSPITLYLEVA Trigger: TGCAACTTCTAGGTACAAGGTTATAGGAGACCGCCAGCCTTCCTCACGATGACCCTGGAGGGGCTGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | TTGACATTCACAAACAGAAAGGCCCCCACAAAACAGTaGTCCTGGCCAGTGGTGGGTTTGCGGCAGACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTFTNRKAPTKQ*SWPVVGLRQTE Trigger: CTCGGTCTGCCGCAAACCCACCACTGGCCAGGATCACTGTTTTGTGGGGGCCTTTCTGTTTGTGAATGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | TTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATaGCACAAAGCACACCAGACACAAAAGCCTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPERPSEMGQLE*HKAHQTQKPGS Trigger: GGAGCCAGGCTTTTGTGTCTGGTGTGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CTCAACTCCAGCCTGAACTGCAGTAGGACTGCGACTTaGCAGGGGAGGTGTAAATCCACTATCTCCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNSSLNCSRTAT*QGRCKSTISKA Trigger: TGCCTTGGAGATAGTGGATTTACACCTCCCCTGCCAAGTCGCAGTCCTACTGCAGTTCAGGCTGGAGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TACACCTCGGACCACATGATTCCAGAGCCCCAAATATaGCTGCTATTGTCCCTTGTGTTCTCCCAGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: YTSDHMIPEPQI*LLLSLVFSQPL Trigger: GAGGGGCTGGGAGAACACAAGGGACAATAGCAGCCATATTTGGGGCTCTGGAATCATGTGGTCCGAGGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GAAGAAATCCTGTCTGCCTCTCGGACCATGACAGAATaGACCCACTGGGTGGCAGAACCTAATGCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: EEILSASRTMTE*THWVAEPNAGI Trigger: GATCCCTGCATTAGGTTCTGCCACCCAGTGGGTTCATTCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | TTCTACACAGGGCTTCTCCCCCTCTGCCTTCATCTATaGAGTCCCTTTGAGCCTCATTCTGCTGGACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: FYTGLLPLCLHL*SPFEPHSAGHS Trigger: GGAATGTCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAGCCCTGTGTAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | AGTCCATTCTCCCTCCCCAGTCTTTCTGTCTTCAGGTaGGAAGATTTCCCCCTCCCTGTCCAAATGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SPFSLPSLSVFR*EDFPLPVQMAL Trigger: AAGTGCCATTTGGACAGGGAGGGGGAAATCTTCCCACCTGAAGACAGAAAGACTGGGGAGGGAGAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TTTTCCAGCCTGCCCACCTGCAAGTGTCTTGTGCCTTaGGGAATGGGCACAGATGAACACAGTAGTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLPTCKCLVP*GMGTDEHSSVS Trigger: AGACACACTACTGTGTTCATCTGTGCCCATTCCCCAAGGCACAAGACACTTGCAGGTGGGCAGGCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | GATGGAATTAGCTCACAGTCTCCACGATCTGAGCTTTaGCCTTTGGCAGTAAGGAGCTGGCGCACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: DGISSQSPRSEL*PLAVRSWRTHT Trigger: TGTGTGTGTGCGCCAGCTCCTTACTGCCAAAGGCCAAAGCTCAGATCGTGGAGACTGTGAGCTAATTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CCCCTGTCCACTACAACATACACTCCCCCAATCTCCTaGGCAAGCTGGTTGACATTCACAAACAGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLSTTTYTPPIS*ASWLTFTNRKA Trigger: GGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCAGAAGAGCATGAGATGCCTTaGCCTGCCCACCCACCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NPVLGTRHGFMFPERPSEEHEMP*PAHPPL Trigger: AAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTC...TTCTGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GCTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTaGGCCTCATTCTGCTGGACATTCCTCAAGGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASPPLPSSMQSL*ASFCWTFLKEF Trigger: AAACTCCTTGAGGAATGTCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | CACAATCTGGGCCTTTCTCCATGTGGCAAAGGAGGGTaGAAACCGATGGAATTAGCTCACAGTCTCCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: HNLGLSPCGKGG*KPMELAHSLHD Trigger: ATCGTGGAGACTGTGAGCTAATTCCATCGGTTTGCACCCTCCTTTGCCACATGGAGAAAGGCCCAGATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | AATGGCCTTGCCCCATTGAGAAGAAGAAATCCTGTCTaGCTCTCGGACCATGACAGAATGAACCCACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NGLAPLRRRNPV*LSDHDRMNPLG Trigger: ACCCAGTGGGTTCATTCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | GGCATGGTTTTATGTTCCCTGAGAGGCCATCAGAAATaGGACAGCTGGAATGCCACAAAGCACACCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: GMVLCSLRGHQK*DSWNATKHTRH Trigger: GTGTCTGGTGTGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAAACCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | AAAGCATTTGCGGTCTGTCAAATGGCCTTGCCCCATTaGGAAGAAGAAATCCTGTCTGCCTCTCGGACCATG | + |
|
Preference number: 3 (lower is better) Translates to: KAFAVCQMALPH*EEEILSASRTM Trigger: CATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GGTTTGCAGCTAGGGGAGAACCATTTGCCACTGAAATaGAGAGCTCTGGTTTCTCTTTGGTACAGCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLQLGENHLPLK*RALVSLWYSWL Trigger: GAGCCAGCTGTACCAAAGAGAAACCAGAGCTCTTCATTTCAGTGGCAAATGGTTCTCCCCTAGCTGCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TGTCTACTGAGACACATTTGCCAATCAGGGACCAGTTaGGACCCCAGGACATATCTGTTCCTAGACAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLRHICQSGTS*DPRTYLFLDNC Trigger: GCAGTTGTCTAGGAACAGATATGTCCTGGGGTCCCAACTGGTCCCTGATTGGCAAATGTGTCTCAGTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | TTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTaGAATGCCACAAAGCACACCAGACACAAAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCSLRGHQKWDS*NATKHTRHKSL Trigger: CAGGCTTTTGTGTCTGGTGTGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | ATGCCCTGGGAAATAATGGGACTAAAGACTAACTCATaGGAGGTGGGATACAACAAGCTAGCCGAGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: MPWEIMGLKTNS*EVGYNKLAEAM Trigger: CATGGCCTCGGCTAGCTTGTTGTATCCCACCTCTCATGAGTTAGTCTTTAGTCCCATTATTTCCCAGGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | AATGATAGGCCAGTCTCAGTACAGAATCAGCTGCCATaGGGAAGCTATTGGGGAAGCCATCAGAGCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NDRPVSVQNQLP*GSYWGSHQSMR Trigger: TCTCATGCTCTGATGGCTTCCCCAATAGCTTCCTCATGGCAGCTGATTCTGTACTGAGACTGGCCTATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | ATTGAGAAGAAGAAATCCTGTCTGCCTCTCGGACCATaGCAGAATGAACCCACTGGGTGGCAGAACCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: IEKKKSCLPLGP*QNEPTGWQNLM Trigger: CATTAGGTTCTGCCACCCAGTGGGTTCATTCTGTCATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GCAAGTGAAGGCCAGGTAATAAAAGGCTACACAATTTaGGTGCACAAGAAGGAACACTGGGCCAGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASEGQVIKGYTI*VHKKEHWASLV Trigger: GACCAGACTGGCCCAGTGTTCCTTCTTGTGCACTCAAATTGTGTAGCCTTTTATTACCTGGCCTTCACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | AAGCCCCTAGAATGCTTATTTACACCTCGGACCACATaGTTCCAGAGCCCCAAATATGGCTGCTATTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KPLECLFTPRTT*FQSPKYGCYCP Trigger: GGGACAATAGCAGCCATATTTGGGGCTCTGGAATCATGTGGTCCGAGGTGTAAATAAGCATTCTAGGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | AGTTGGGACCCCAGGACATATCTGTTCCTAGACAACTaGTATGTGACACTAGGTTTTGAGGAGTCACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SWDPRTYLFLDN*YVTLGFEESPT Trigger: AGTGGGTGACTCCTCAAAACCTAGTGTCACATAGCAGTTGTCTAGGAACAGATATGTCCTGGGGTCCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | ACTACAACATACACTCCCCCAATCTCCTGGGCAAGCTaGTTGACATTCACAAACAGAAAGGCCCCCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTTYTPPISWAS*LTFTNRKAPTK Trigger: TTTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGGGGAGTGTATGTTGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAATGTCCAAATGGCACTTaGGGTGGTCTGGAGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFVSSDVISCRETRLYLQCPNGT*GGLELC Trigger: GCAGAGCTCCAGACCACCCAAAGTGCCATTTGGACA...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTAGCTCTGGTTTCTCTTaGGTACAGCTGGCTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPSSGFS*VQLALK Trigger: CTTTAGAGCCAGCTGTACCAAAGAGAAACCAGAGCT...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCATCTACTGAGACACATTaGCCAATCAGGGACCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSGEGGLAISHSYQIFTPSTETH*PIRDQL Trigger: CAACTGGTCCCTGATTGGCAAATGTGTCTCAGTAGA...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCAAATGGCCTTGCCCCATaGAGAAGAAGAAATCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RSGEGGLAISHSYQIFTPNGLAP*RRRNPV Trigger: GACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATT...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR GCA 72 bp | TTGCAGAAAAAGCATTTGCGGTCTGTCAAATGGCCTTaGCCCATTGAGAAGAAGAAATCCTGTCTGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQKKHLRSVKWP*PIEKKKSCLPL Trigger: GAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTTTTCTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | CCCCTTTCAAATAAGCTGCTCCAAACCAGACAGTCCTaGGAACTTATACCACAAGAATACAAACCATGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLSNKLLQTRQS*ELIPQEYKPWA Trigger: GGCCCATGGTTTGTATTCTTGTGGTATAAGTTCCCAGGACTGTCTGGTTTGGAGCAGCTTATTTGAAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | TTTCAAGCTCCTGTGAAACTCACTAGGAGCCTTCCCTaGCTTCTGTCAGCCTTTTCTTTCTCTCTAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FQAPVKLTRSLP*LLSAFSFSLVC Trigger: ACAGACTAGAGAGAAAGAAAAGGCTGACAGAAGTCAGGGAAGGCTCCTAGTGAGTTTCACAGGAGCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR TCA 72 bp | GTCTTGCTGAACAGATGTCCCAGCCGTAAGAGCAAGTaGAGGCCAGGTAATAAAAGGCTACACAATTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLLNRCPSRKSK*RPGNKRLHNLS Trigger: ACTCAAATTGTGTAGCCTTTTATTACCTGGCCTTCACTTGCTCTTACGGCTGGGACATCTGTTCAGCAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CCA 72 bp | ACCAGTTTGCAGAAAAAGCATTTGCGGTCTGTCAAATaGCCTTGCCCCATTGAGAAGAAGAAATCCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLQKKHLRSVK*PCPIEKKKSCL Trigger: CAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTTTTCTGCAAACTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCGCGTGGAGCCAGAGCTaGTGGGAACAGCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPASLDMHVGAQELLGVLAWSQS*WEQQQG Trigger: CCCCTGCTGCTGTTCCCAGCAGCTCTGGCTCCACGC...GAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTATGGGAGAGGGTGTGCTaGGGCCTGGAGGGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLWERVC*GLEGPR Trigger: CCGTGGCCCCTCCAGGCCCCAGCACACCCTCTCCCA...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCGCAGCAGGGGTATGCTaGCCCACAGGATGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPASLDMHVGAQELLGVLAAGVC*PTGWLA Trigger: AGCGAGCCATCCTGTGGGGCAGCATACCCCTGCTGC...GAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTACTGGTGTCTGGCTGGTaGGGGGCTGAGTGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLLVSGW*GAEWLQ Trigger: CTGAAGCCACTCAGCCCCTCACCAGCCAGACACCAG...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCCCCTTCCCCTTTCTCAGGAAACCCATCATCACTATGCTGGGCCCTCCCACCTCGGAGACACTaGAAGTCAGATTGCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSPFSGNPSSLCWALPPRRH*KSDCHR Trigger: GCGGTGGCAATCTGACTTCCAGTGTCTCCGAGGTGG...GAGGGCCCAGCATAGTGATGATGGGTTTCCTGAGAAAGGGGAAGGGGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCAGGGTGTGCTGGGGCCTaGAGGGGCCACGGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FMFPERPSEMGQLECHKAGCAGA*RGHGSP Trigger: GGGACTCCCGTGGCCCCTCCAGGCCCCAGCACACCC...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCCCCTTCCCCTTTCTCAGGAAACCCATCATCACTATGCTGGGCCCTCATTGCTCGTGGGGTTTaGGGTGGAGGTCGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSPFSGNPSSLCWALIARGV*GGGRHR Trigger: TCTATGCCGACCTCCACCCCAAACCCCACGAGCAAT...GAGGGCCCAGCATAGTGATGATGGGTTTCCTGAGAAAGGGGAAGGGGCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATCTGCAGCTCCTCTGTaGGCCGTTGCTGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGSAAPL*AVAGPS Trigger: GGAAGGACCAGCAACGGCTCACAGAGGAGCTGCAGA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCATCAGAGCATGAGATGCCTTTGCCTGCCCACCCACCCCTTAGGCAGATTCACTGCCACCGCCTaGTTATCTAGAATAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHQSMRCLCLPTHPLGRFTATA*LSRIGA Trigger: GGCCCCTATTCTAGATAACCAGGCGGTGGCAGTGAA...TCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | GCACAGGGTGGGCAGTGTGGGATGCGTGTTTTCCTCTaGTCCCTGTCCCTGGGGAGACTCTTTGTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQGGQCGMRVFL*SLSLGRLFVSS Trigger: TGAAGACACAAAGAGTCTCCCCAGGGACAGGGACAAGAGGAAAACACGCATCCCACACTGCCCACCCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCAAGATGGGAGAGGGTGTaGTGGGGCCTGGAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FMFPERPSEMGQLECHKARWERV*WGLEGP Trigger: TGGCCCCTCCAGGCCCCAGCACACCCTCTCCCATCT...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCCCCTTCCCCTTTCTCAGGAAACCCATCATCACTATGCTGGGCCCTCAAGGAGCAGGAAGGATaGCATGCAGACGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSPFSGNPSSLCWALKEQEG*HADDGD Trigger: ATCACCATCGTCTGCATGGCATCCTTCCTGCTCCTT...GAGGGCCCAGCATAGTGATGATGGGTTTCCTGAGAAAGGGGAAGGGGCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCATCAGAGCATGAGATGCCTTTGCCTGCCCACCCACCCCTTAGGCAGAACCACCTTCTTCTCCTaGATCTCAGAAGGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHQSMRCLCLPTHPLGRTTFFS*ISEGVS Trigger: GGAGACTCCTTCTGAGATGCAGGAGAAGAAGGTGGT...TCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | TCACCTGCCTCTCTTGACATGCACGTGGGAGCACAAGAGCTGCTGGGTGTGCTCGATGTTGTGGCACTTTaGTGGCTCTGGACAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPASLDMHVGAQELLGVLDVVAL*WLWTVL Trigger: TAGCACTGTCCAGAGCCACCAAAGTGCCACAACATC...GAGCACACCCAGCAGCTCTTGTGCTCCCACGTGCATGTCAAGAGAGGCAGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAATGTCAGTGCTGGGCGTaGAGCCAGAGCTGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKCQCWA*SQSCWE Trigger: TTCCCAGCAGCTCTGGCTCCACGCCCAGCACTGACA...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTAGAAGGACGCTTTGACTaGGTGACACAGCAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLEGRFD*VTQQFH Trigger: GTGGAACTGCTGTGTCACTCAGTCAAAGCGTCCTTC...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTAGACGCCATAGACTGTTaGAGTGTGGAGACGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLDAIDC*SVETGN Trigger: ATTGCCCGTCTCCACACTGCAACAGTCTATGGCGTC...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR GCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGACCATTCTCCACTGTCTaGAGCTCCTCTGTGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGPFSTV*SSSVSR Trigger: ACGGCTCACAGAGGAGCTGCAGACAGTGGAGAATGG...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTTGAGCCTCATTCTGCTGGATCTGTGAGCCGTTGCTaGTCCTTCCTCTGGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLCLHLCSPFEPHSAGSVSRC*SFLWEI Trigger: GATCTCCCAGAGGAAGGACCAGCAACGGCTCACAGA...TCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CCA 90 bp | CACAGGGCCCCTTCCCCTTTCTCAGGAAACCCATCATCACTATGCTGGGCCCTCCATCTAGGTCATCCTTaGTCAAGTTGTCCAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSPFSGNPSSLCWALHLGHP*SSCPEG Trigger: TCCCTCTGGACAACTTGACCAAGGATGACCTAGATG...GAGGGCCCAGCATAGTGATGATGGGTTTCCTGAGAAAGGGGAAGGGGCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCATCAGAGCATGAGATGCCTTTGCCTGCCCACCCACCCCTTAGGCAGAAGTTGTGACTTCTGTTaGTGTTGTGGCACTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHQSMRCLCLPTHPLGRSCDFC*CCGTLV Trigger: CACCAAAGTGCCACAACATCAACAGAAGTCACAACT...TCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CCA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTAGTTGTGGCACTTTGGTaGCTCTGGACAGTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLVVALW*LWTVLD Trigger: ATCTAGCACTGTCCAGAGCCACCAAAGTGCCACAAC...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | ATTAGCTCACAGTCTCCACGATCTGAGCTTTGGCCTTaGGCAGTAAGGAGCTGGCGCACACACACACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQSPRSELWP*AVRSWRTHTQH Trigger: GTGTTGTGTGTGTGTGCGCCAGCTCCTTACTGCCAAAGGCCAAAGCTCAGATCGTGGAGACTGTGAGCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | GGCTTCTCCCCCTCTGCCTTCATCTATGCAGTCCCTTaGAGCCTCATTCTGCTGGACATTCCTCAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSPSAFIYAVP*SLILLDIPQGV Trigger: AACTCCTTGAGGAATGTCCAGCAGAATGAGGCTCAAAGGGACTGCATAGATGAAGGCAGAGGGGGAGAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | AATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCAGAAGTCCACTGCTACTGGTaGAGGCCGTGCTACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPVLGTRHGFMFPERPSEVHCYW*RPCYWE Trigger: CTCCCAGTAGCACGGCCTTCACCAGTAGCAGTGGAC...TTCTGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCATCAGAGCATGAGATGCCTTTGCCTGCCCACCCACCCCTTAGGCAGAGGTAGAAAGAAGCTTTaGGGTGGTATTAAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHQSMRCLCLPTHPLGRGRKKL*GGIKVS Trigger: ACTGACCTTAATACCACCTCAAAGCTTCTTTCTACC...TCTGCCTAAGGGGTGGGTGGGCAGGCAAAGGCATCTCATGCTCTGATGGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCATTCCAAAGGCCCAGATaGGAGAGGGTGTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGEGGLAISHSYQIFTPFQRPR*ERVCWG Trigger: GCCCCAGCACACCCTCTCCCATCTGGGCCTTTGGAA...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCTCCTGGGCAAGCTGGTTGACATTCACAAACAGAAAGGCCCCCACAAAGCACAAATCCTCAGCTaGCTTGAAGGACGCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNLLGKLVDIHKQKGPHKAQILS*LEGRFD Trigger: GTCAAAGCGTCCTTCAAGCCAGCTGAGGATTTGTGC...TTTGTGGGGGCCTTTCTGTTTGTGAATGTCAACCAGCTTGCCCAGGAGATTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCAGTCCTCATTGACCTCTaGAGGCCCTTCCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSGEGGLAISHSYQIFTPVLIDL*RPFLPQ Trigger: CTGGGGAAGGAAGGGCCTCCAGAGGTCAATGAGGAC...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGGGGAGGGAGGCTTAGCTATCTCTCATAGCTATCAAATCTTTACCCCACAGGATGGCTCGCTGTaGTCGGTGAAGAATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSGEGGLAISHSYQIFTPQDGSL*SVKNPQ Trigger: CTGTGGATTCTTCACCGAGCACAGCGAGCCATCCTG...TGGGGTAAAGATTTGATAGCTATGAGAGATAGCTAAGCCTCCCTCCCCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | TTGTACCTAGAAGTTGCAGTCCTTAATTCCCTGTTCTaGAGAAACACGCAGCACAGGGTGGGCAGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYLEVAVLNSLF*RNTQHRVGSVG Trigger: TCCCACACTGCCCACCCTGTGCTGCGTGTTTCTCAAGAACAGGGAATTAAGGACTGCAACTTCTAGGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAACGCTTTGATTGCTCGTaGGGTTTGGGGTGGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSDVISCRETRLYLQRFDCS*GLGWRS Trigger: CGACCTCCACCCCAAACCCCACGAGCAATCAAAGCG...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAATGGAGCCAGAGCTGCTaGGAACAGCAGCAGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSDVISCRETRLYLQWSQSC*EQQQGY Trigger: ATACCCCTGCTGCTGTTCCCAGCAGCTCTGGCTCCA...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | AAAAGCATTTGCGGTCTGTCAAATGGCCTTGCCCCATaGAGAAGAAGAAATCCTGTCTGCCTCTCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSICGLSNGLAP*RRRNPVCLSDH Trigger: ATGGTCCGAGAGGCAGACAGGATTTCTTCTTCTCAATGGGGCAAGGCCATTTGACAGACCGCAAATGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCACTGGGTGACCAGTTGTaGCTTCTGTTGATGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNPVLGTRHGFMFPERPSLGDQL*LLLMLW Trigger: CCACAACATCAACAGAAGTCACAACTGGTCACCCAG...TGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGTTCCCTGAGAGGCCATCAGAAATGGGACAGCTGGAATGCCACAAAGCAGCACTTTGGTGGCTCTaGACAGTGCTAGATTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FMFPERPSEMGQLECHKAALWWL*TVLDLI Trigger: TATCAAATCTAGCACTGTCCAGAGCCACCAAAGTGC...TGCTTTGTGGCATTCCAGCTGTCCCATTTCTGATGGCCTCTCAGGGAACATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAACATCACTTCCAAGGTTaGGTTGTCATGGTAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSSDVISCRETRLYLQHHFQG*VVMVTI Trigger: AATGGTTACCATGACAACCCAACCTTGGAAGTGATG...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | TGTGGAATAATAATAATGCCTGGTAGGTTAGATCGATaGTCTACTGAGACACATTTGCCAATCAGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGIIIMPGRLDR*STETHLPIRDQ Trigger: CTGGTCCCTGATTGGCAAATGTGTCTCAGTAGACAATCGATCTAACCTACCAGGCATTATTATTATTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| 3UTR CAA 72 bp | GGAGGTGTAAATCCACTATCTCCAAGGCAAATACGTTaGTTACCAGCCTGTCTTGTTACTTTCTTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGVNPLSPRQIR*LPACLVTFFIF Trigger: AAAAATGAAGAAAGTAACAAGACAGGCTGGTAACAAACGTATTTGCCTTGGAGATAGTGGATTTACACCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
||
| CDS GCA 90 bp | CTGGGCGTGGAGCCAGAGCTGCTGGGAACAGCAGCAGGGGTATGCTaGCCCACAGGATGGCTCGCTGTGCTCGGTGAAGAATCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGVEPELLGTAAGVC*PTGWLAVLGEESTG Trigger: GCCTGTGGATTCTTCACCGAGCACAGCGAGCCATCCTGTGGGGCAGCATACCCCTGCTGCTGTTCCCAGCAGCTCTGGCTCCACGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 90 bp | GATGGTGATGATGAGCGGCAGGCTGAAGCGGTCCTCATTGACCTCTaGAGGCCCTTCCTTCCCCAGCTTCATGTCACTGACTCCGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: DGDDERQAEAVLIDL*RPFLPQLHVTDSGL Trigger: GAGGCCGGAGTCAGTGACATGAAGCTGGGGAAGGAAGGGCCTCCAGAGGTCAATGAGGACCGCTTCAGCCTGCCGCTCATCATCACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 90 bp | CGCCATAGACTGTTGCAGTGTGGAGACGGGCAATGTAGTGATGCCTaGTGTCTGGCTGGTGAGGGGCTGAGTGGCTTCAGAGGTGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: RHRLLQCGDGQCSDA*CLAGEGLSGFRGAQ Trigger: TTGGGCACCTCTGAAGCCACTCAGCCCCTCACCAGCCAGACACCAGGCATCACTACATTGCCCGTCTCCACACTGCAACAGTCTATGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 90 bp | GAGACGGGCAATGTAGTGATGCCTGGTGTCTGGCTGGTGAGGGGCTaGGTGGCTTCAGAGGTGCCCAATGGTTTGTGTGTAGTGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ETGNVVMPGVWLVRG*VASEVPNGLCVVGF Trigger: GAAGCCCACTACACACAAACCATTGGGCACCTCTGAAGCCACTCAGCCCCTCACCAGCCAGACACCAGGCATCACTACATTGCCCGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | CACACCAGACACAAAAGCCTGGCTCCGTGCTGGGAGAGTAGGCCAAGGTATCTTCTGAAGCGGTCCTCATaGACCTCTGGAGGCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: HTRHKSLAPCWESRPRYLLKRSS*TSGGPS Trigger: GGAAGGGCCTCCAGAGGTCAATGAGGACCGCTTCAG...AAGATACCTTGGCCTACTCTCCCAGCACGGAGCCAGGCTTTTGTGTCTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | CAACCTTTGTCACCAAAGGGCTGTGTGGCCCCGTGCAAGTCACCTGACCTCTTACAGGCTGCTGAGGGCTaGTTGTGTTGTCTGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPLSPKGCVAPCKSPDLLQAAEG*LCCLLW Trigger: CCACAACAGACAACACAACAAGCCCTCAGCAGCCTG...TAAGAGGTCAGGTGACTTGCACGGGGCCACACAGCCCTTTGGTGACAAAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 90 bp | TGGTGTCTGGCTGGTGAGGGGCTGAGTGGCTTCAGAGGTGCCCAATaGTTTGTGTGTAGTGGGCTTCCATGTCAGTGTAGAGTTGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: WCLAGEGLSGFRGAQ*FVCSGLPCQCRVVS Trigger: ACTGACAACTCTACACTGACATGGAAGCCCACTACACACAAACCATTGGGCACCTCTGAAGCCACTCAGCCCCTCACCAGCCAGACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | GGAGGAGCTCCAGAGACTCGCATGGCGTTCTCCATCTTCCTCCTGCCTTCCTGCTGGACAGTGCTAGATTaGATAGCAGATGTGCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: GGAPETRMAFSIFLLPSCWTVLD*IADVLV Trigger: GACTAGCACATCTGCTATCAAATCTAGCACTGTCCA...GCAGGAAGGCAGGAGGAAGATGGAGAACGCCATGCGAGTCTCTGGAGCTCCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | CACACCAGACACAAAAGCCTGGCTCCGTGCTGGGAGAGTAGGCCAAGGTATCTTTCCAGAGGAGGCTGTTaGTCCACTGCTACTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: HTRHKSLAPCWESRPRYLSRGGC*STATGE Trigger: TTCACCAGTAGCAGTGGACAAACAGCCTCCTCTGGA...AAGATACCTTGGCCTACTCTCCCAGCACGGAGCCAGGCTTTTGTGTCTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 90 bp | CTAGATTTGATAGCAGATGTGCTAGTCTCATTTCCATTATGGGAGTaGGATGCAGGCGACAGTAGCAGCAGCAGCAGCGCGGAGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LDLIADVLVSFPLWE*DAGDSSSSSSAESA Trigger: GGCGCTCTCCGCGCTGCTGCTGCTGCTACTGTCGCCTGCATCTCACTCCCATAATGGAAATGAGACTAGCACATCTGCTATCAAATCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | CACACCAGACACAAAAGCCTGGCTCCGTGCTGGGAGAGTAGGCCAAGGTATCTTTCATCTAGGTCATCCTaGGTCAAGTTGTCCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: HTRHKSLAPCWESRPRYLSSRSS*VKLSRG Trigger: CCCTCTGGACAACTTGACCAAGGATGACCTAGATGA...AAGATACCTTGGCCTACTCTCCCAGCACGGAGCCAGGCTTTTGTGTCTGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 90 bp | CAACTGTCCCCCAGCTCCCCATTAAGGTTGACCACCTTCTTCTCCTaGATCTCAGAAGGAGTCTCCATCACTTCCAAGGTTGGGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: QLSPSSPLRLTTFFS*ISEGVSITSKVGLS Trigger: TGACAACCCAACCTTGGAAGTGATGGAGACTCCTTCTGAGATGCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCTGGGGGACAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGTGTACTTTAGACCCCTGTCCACTACAACATACACTCCCCCAATCTCCTAGCTCCCCATTAAGGTaGACCACCTTCTTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: FQCTLDPCPLQHTLPQSPSSPLR*TTFFSC Trigger: GCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCT...AGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAAGTACACTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | AATCCTGTGCTAGGTACTAGGCATGGTTTTATGTTCCCTGAGAGGCCATCAGAACCATCACTTCCAAGGTaGGGTTGTCATGGTAACCAT | + |
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Preference number: 5 (lower is better) Translates to: NPVLGTRHGFMFPERPSEPSLPR*GCHGNH Trigger: ATGGTTACCATGACAACCCAACCTTGGAAGTGATGG...TTCTGATGGCCTCTCAGGGAACATAAAACCATGCCTAGTACCTAGCACAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS-3UTR CAA 90 bp | CTCTTTGTGTCTTCAGATGTGATTTCCTGTAGGGAGACTAGACTGTATCTCCAATCATCCTTGGTCAAGTaGTCCAGAGGGACGATCCAA | + |
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Preference number: 5 (lower is better) Translates to: LFVSSDVISCRETRLYLQSSLVK*SRGTIQ Trigger: TTGGATCGTCCCTCTGGACAACTTGACCAAGGATGA...TTGGAGATACAGTCTAGTCTCCCTACAGGAAATCACATCTGAAGACACAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 72 bp | GTGGAGCCAGAGCTGCTGGGAACAGCAGCAGGGGTATaGTGCCCCACAGGATGGCTCGCTGTGCTCGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VEPELLGTAAGV*CPTGWLAVLGE Trigger: TTCACCGAGCACAGCGAGCCATCCTGTGGGGCAGCATACCCCTGCTGCTGTTCCCAGCAGCTCTGGCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 72 bp | TCCAAAGGCCCAGATGGGAGAGGGTGTGCTGGGGCCTaGAGGGGCCACGGGAGTCCCATTAGAGATGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SKGPDGRGCAGA*RGHGSPIRDEV Trigger: CACCTCATCTCTAATGGGACTCCCGTGGCCCCTCCAGGCCCCAGCACACCCTCTCCCATCTGGGCCTTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 72 bp | CAGCAGGGGTATGCTGCCCCACAGGATGGCTCGCTGTaGTCGGTGAAGAATCCACAGGCTGCTGAGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QQGYAAPQDGSL*SVKNPQAAEGL Trigger: CAAGCCCTCAGCAGCCTGTGGATTCTTCACCGAGCACAGCGAGCCATCCTGTGGGGCAGCATACCCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 72 bp | GAGCCAGAGCTGCTGGGAACAGCAGCAGGGGTATGCTaGCCCACAGGATGGCTCGCTGTGCTCGGTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: EPELLGTAAGVC*PTGWLAVLGEE Trigger: TTCTTCACCGAGCACAGCGAGCCATCCTGTGGGGCAGCATACCCCTGCTGCTGTTCCCAGCAGCTCTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | CACCTCGGAGACACTGGAAGTCAGATTGCCACCGCTTaGATTGCTCGTGGGGTTTGGGGTGGAGGTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLGDTGSQIATA*IARGVWGGGRH Trigger: ATGCCGACCTCCACCCCAAACCCCACGAGCAATCAAAGCGGTGGCAATCTGACTTCCAGTGTCTCCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | ATGGTGATGATGAGCGGCAGGCTGAAGCGGTCCTCATaGACCTCTGGAGGCCCTTCCTTCCCCAGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: MVMMSGRLKRSS*TSGGPSFPSFM Trigger: CATGAAGCTGGGGAAGGAAGGGCCTCCAGAGGTCAATGAGGACCGCTTCAGCCTGCCGCTCATCATCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 90 bp | ATGCAGACGATGGTGATGATGAGCGGCAGGCTGAAGCGGTCCTCATaGACCTCTGGAGGCCCTTCCTTCCCCAGCTTCATGTCACTGACT | + |
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Preference number: 6 (lower is better) Translates to: MQTMVMMSGRLKRSS*TSGGPSFPSFMSLT Trigger: AGTCAGTGACATGAAGCTGGGGAAGGAAGGGCCTCCAGAGGTCAATGAGGACCGCTTCAGCCTGCCGCTCATCATCACCATCGTCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | ACCTCGGAGACACTGGAAGTCAGATTGCCACCGCTTTaGTTGCTCGTGGGGTTTGGGGTGGAGGTCGGCATA | + |
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Preference number: 6 (lower is better) Translates to: TSETLEVRLPPL*LLVGFGVEVGI Trigger: TATGCCGACCTCCACCCCAAACCCCACGAGCAATCAAAGCGGTGGCAATCTGACTTCCAGTGTCTCCGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | GGTTTGTGTGTAGTGGGCTTCCATGTCAGTGTAGAGTaGTCAGTGCTGGGCGTGGAGCCAGAGCTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLCVVGFHVSVE*SVLGVEPELLG Trigger: TCCCAGCAGCTCTGGCTCCACGCCCAGCACTGACAACTCTACACTGACATGGAAGCCCACTACACACAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 72 bp | GTGGGGTTTGGGGTGGAGGTCGGCATAGATGGAGATTaGGTTGAGGTTGTGAATGGTGTAGGGTTGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGFGVEVGIDGD*VEVVNGVGLLG Trigger: GCCAAGCAACCCTACACCATTCACAACCTCAACCCAATCTCCATCTATGCCGACCTCCACCCCAAACCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 72 bp | GCTGGTGAGGGGCTGAGTGGCTTCAGAGGTGCCCAATaGTTTGTGTGTAGTGGGCTTCCATGTCAGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: AGEGLSGFRGAQ*FVCSGLPCQCR Trigger: TCTACACTGACATGGAAGCCCACTACACACAAACCATTGGGCACCTCTGAAGCCACTCAGCCCCTCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | GGGACGATCCAACTGTCCCCCAGCTCCCCATTAAGGTaGACCACCTTCTTCTCCTGCATCTCAGAAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GTIQLSPSSPLR*TTFFSCISEGV Trigger: GACTCCTTCTGAGATGCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCTGGGGGACAGTTGGATCGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 90 bp | CAGAGGTGTGTGTCTTCCTCCTCATCTAGGTCATCCTTGGTCAAGTaGTCCAGAGGGACGATCCAACTGTCCCCCAGCTCCCCATTAAGG | + |
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Preference number: 6 (lower is better) Translates to: QRCVSSSSSRSSLVK*SRGTIQLSPSSPLR Trigger: CCTTAATGGGGAGCTGGGGGACAGTTGGATCGTCCCTCTGGACAACTTGACCAAGGATGACCTAGATGAGGAGGAAGACACACACCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | GTTTGGGGTGGAGGTCGGCATAGATGGAGATTGGGTTaGGGTTGTGAATGGTGTAGGGTTGCTTGGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VWGGGRHRWRLG*GCEWCRVAWLG Trigger: ACCCAGCCAAGCAACCCTACACCATTCACAACCTCAACCCAATCTCCATCTATGCCGACCTCCACCCCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 90 bp | TTGTCCAGAGGGACGATCCAACTGTCCCCCAGCTCCCCATTAAGGTaGACCACCTTCTTCTCCTGCATCTCAGAAGGAGTCTCCATCACT | + |
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Preference number: 6 (lower is better) Translates to: LSRGTIQLSPSSPLR*TTFFSCISEGVSIT Trigger: AGTGATGGAGACTCCTTCTGAGATGCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCTGGGGGACAGTTGGATCGTCCCTCTGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | ATAGCAGATGTGCTAGTCTCATTTCCATTATGGGAGTaGGATGCAGGCGACAGTAGCAGCAGCAGCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: IADVLVSFPLWE*DAGDSSSSSSA Trigger: CGCGCTGCTGCTGCTGCTACTGTCGCCTGCATCTCACTCCCATAATGGAAATGAGACTAGCACATCTGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 72 bp | TCAGTCGTAGTTCCCACTGTAGACGCCATAGACTGTTaGAGTGTGGAGACGGGCAATGTAGTGATGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SVVVPTVDAIDC*SVETGNVVMPG Trigger: ACCAGGCATCACTACATTGCCCGTCTCCACACTGCAACAGTCTATGGCGTCTACAGTGGGAACTACGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 72 bp | AGAGGTGTGTGTCTTCCTCCTCATCTAGGTCATCCTTaGTCAAGTTGTCCAGAGGGACGATCCAACTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RGVCLPPHLGHP*SSCPEGRSNCP Trigger: GGGACAGTTGGATCGTCCCTCTGGACAACTTGACCAAGGATGACCTAGATGAGGAGGAAGACACACACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | GTGAAGGCCGTGCTACTGGGAGAGCTTGTTTTAGTCTaGTCCACCTCGGAGACACTGGAAGTCAGATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VKAVLLGELVLV*STSETLEVRLP Trigger: TGGCAATCTGACTTCCAGTGTCTCCGAGGTGGACAAGACTAAAACAAGCTCTCCCAGTAGCACGGCCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | CAGAGGTGTGTGTCTTCCTCCTCATCTAGGTCATCCTaGGTCAAGTTGTCCAGAGGGACGATCCAACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QRCVSSSSSRSS*VKLSRGTIQLS Trigger: GGACAGTTGGATCGTCCCTCTGGACAACTTGACCAAGGATGACCTAGATGAGGAGGAAGACACACACCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS GCA 72 bp | CCCAGCTCCCCATTAAGGTTGACCACCTTCTTCTCCTaGATCTCAGAAGGAGTCTCCATCACTTCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSPLRLTTFFS*ISEGVSITSKV Trigger: AACCTTGGAAGTGATGGAGACTCCTTCTGAGATGCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | GCACAAATCCTCAGCTGGCTTGAAGGACGCTTTGACTaGGTGACACAGCAGTTCCACGAGTTTCTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AQILSWLEGRFD*VTQQFHEFLFL Trigger: GAGAAAGAGAAACTCGTGGAACTGCTGTGTCACTCAGTCAAAGCGTCCTTCAAGCCAGCTGAGGATTTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | AAATCCTCAGCTGGCTTGAAGGACGCTTTGACTGAGTaGCACAGCAGTTCCACGAGTTTCTCTTTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: KSSAGLKDALTE*HSSSTSFSFSS Trigger: GGATGAGAAAGAGAAACTCGTGGAACTGCTGTGTCACTCAGTCAAAGCGTCCTTCAAGCCAGCTGAGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CCA 72 bp | GTGACTTCTGTTGATGTTGTGGCACTTTGGTGGCTCTaGACAGTGCTAGATTTGATAGCAGATGTGCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: VTSVDVVALWWL*TVLDLIADVLV Trigger: GACTAGCACATCTGCTATCAAATCTAGCACTGTCCAGAGCCACCAAAGTGCCACAACATCAACAGAAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS TCA 72 bp | TGTTGTGTTGTCTGTTGTGGGGGTAGAAAGAAGCTTTaGGGTGGTATTAAGGTCAGTAGGCTGAGAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: CCVVCCGGRKKL*GGIKVSRLRRD Trigger: GTCTCTTCTCAGCCTACTGACCTTAATACCACCTCAAAGCTTCTTTCTACCCCCACAACAGACAACACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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| CDS CAA 72 bp | GTTGTGGCACTTTGGTGGCTCTGGACAGTGCTAGATTaGATAGCAGATGTGCTAGTCTCATTTCCATTATGG | + |
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Preference number: 6 (lower is better) Translates to: VVALWWLWTVLD*IADVLVSFPLW Trigger: CCATAATGGAAATGAGACTAGCACATCTGCTATCAAATCTAGCACTGTCCAGAGCCACCAAAGTGCCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026698.8 |
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