Pregenerated sensors for PODNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012889Ensembl transcript IDs: ENSMUST00000093380.5
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTaGGCAGGACAGGCACAGCCTCTTAGGCCGCAGCTGAGAGCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: PPLTADTCSYCFGQL*AGQAQPLRPQLRAF Trigger: GAAAGCTCTCAGCTGCGGCCTAAGAGGCTGTGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| 3UTR CAA 90 bp | TCAGCCCCTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTaGGCCAGCTCTGGGCAGGACAGGCACAGCCTCTTAGGCCGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SAPNHLLQQTPAPTA*ASSGQDRHSLLGRS Trigger: GCTGCGGCCTAAGAGGCTGTGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAGGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGGACACCTGCTCCTACTaGTTTGGCCAGCTCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLITICAGGCSLRPRTFKDTCSY*FGQLWA Trigger: TGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTC...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCTTACAGCAGACACCTaGTCCTACTGCTTTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSSPSVLEGVVCAPERSSLTADT*SYCFGQ Trigger: CTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| 3UTR CCA 72 bp | ACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTaGGCAGGACAGGCACAGCCTCTTAGGCCGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TADTCSYCFGQL*AGQAQPLRPQL Trigger: CAGCTGCGGCCTAAGAGGCTGTGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCATGCCCTGCTCCTACTGCTTaGGCCAGCTCTGGGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TICAGGCSLRPRTFKSACPAPTA*ASSGQD Trigger: GTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGG...GCATGCGGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCACAGCCAGGTCCAAGCTaGGCAGGGCGCGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTADTCSYCFGQLWAGQAQPGPS*AGRAGG Trigger: GCCGCCTGCGCGCCCTGCGCAGCTTGGACCTGGCTG...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGAGCCTCAGCGTCCCCTTaGGCAGCGCCGAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLTADTCSYCFGQLWAGASASP*AAPRPP Trigger: TGGGGGCCTCGGCGCTGCCCAAGGGGACGCTGAGGC...TCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR TCA 90 bp | CTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGGGTGCGCAAGCCGCTaGGGCGGGACAGCTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LITICAGGCSLRPRTFKSGCASR*GGTARC Trigger: ACAACGAGCTGTCCCGCCTCAGCGGCTTGCGCACCC...GGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCCCAGCGCGGCCACGTaGTTGTGGGGCATTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQTPAPTALASSGQDRPSAAT*LWGITR Trigger: CCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGG...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCGCAGCTCGTGCCAGGTaGCAGGCCCAATGTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTSYSRHLLLLLWPALGAARAR*QAQCRP Trigger: TGGGCGACATTGGGCCTGGCACCTGGCACGAGCTGC...GCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGAGTGCCTGCAGCTCGTaGCAGGTGCCAGGCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQTPAPTALASSGQDRSACSS*QVPGPM Trigger: CATTGGGCCTGGCACCTGGCACGAGCTGCAGGCACT...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCGGCCACGTGGTTGTaGGGCATTACCAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LITICAGGCSLRPRTFKSAATWL*GITRAC Trigger: GCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGC...GGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCTCGGGAGGGGCTGTaGGCTGTCACCCAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSVLEGVVCAPERSSPREGL*AVTQVW Trigger: CCACACTTGGGTGACAGCTCACAGCCCCTCCCGAGG...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCAGCTGTCACCCAAGTGTaGGAAGGCAGGGTCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTADTCSYCFGQLWAGQAAVTQV*EGRVLR Trigger: ACGGAGGACCCTGCCTTCCCACACTTGGGTGACAGC...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTTCAGCGAGCGCAAACTaGCGGGCAGGCCCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSVLEGVVCAPERSSSASAN*RAGPQA Trigger: TGCCTGAGGGCCTGCCCGCCAGTTTGCGCTCGCTGA...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGAGTCTGGAGGCTCAGTaGTCCTCTGGGCACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQQTPAPTALASSGQDRSLEAQ*SSGHLG Trigger: TCCAAGGTGCCCAGAGGAGCACTGAGCCTCCAGACT...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCAAGCACCTTAAGTGCCTaGAGCTCGTGCCAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTADTCSYCFGQLWAGQASTLSA*SSCQVP Trigger: TGGCACCTGGCACGAGCTGCAGGCACTTAAGGTGCT...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | ACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCATGCGTCCAGCACCTTAAGTaGCTGCAGCTCGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TICAGGCSLRPRTFKSACVQHLK*LQLVPG Trigger: ACCTGGCACGAGCTGCAGGCACTTAAGGTGCTGGAC...GCATGCGGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | GGCATCTGCTTTATTTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCGACACGCAGGGAGCGTaGCAGGAACTGGGGCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GICFISSSPSVLEGVVCADTQGA*QELGRY Trigger: GTAGCGCCCCAGTTCCTGCCACGCTCCCTGCGTGTC...GGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAAATAAAGCAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | ACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGGATGTACGTGTGCGCTaGCCAGGCTGTTGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTSYSRHLLLLLWPALGRDVRVR*PGCCRP Trigger: TGGCCTACAACAGCCTGGCCAGCGCACACGTACATC...CCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR TCA 90 bp | CTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCGAAGGGCCTCGGCTCTaGTGCTGGTCATATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTTSYSRHLLLLLWPALGEGPRL*CWSYEA Trigger: GGCTTCATATGACCAGCATCAGAGCCGAGGCCCTTC...GCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR TCA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGAGGTGTGTAAGCCCCTaGAGGGCCTCGGCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLITICAGGCSLRPRTFKRCVSP*RASALM Trigger: CATCAGAGCCGAGGCCCTTCAGGGGCTTACACACCT...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGAGTACACAGACCGGAGTaGAGGCTTCTCCCCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLTADTCSYCFGQLWAGVHRPE*RLLPKG Trigger: ACCTTTGGGGAGAAGCCTGCACTCCGGTCTGTGTAC...TCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGGGAGCTCCCGAAGCTaGTTGTTCTGCAAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LITICAGGCSLRPRTFKSGSSRS*LFCKER Trigger: CCTCTCCTTGCAGAACAACCAGCTTCGGGAGCTCCC...GGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGGACCCTCGGGTACTGTaGCCAGCTGGTTGTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FLITICAGGCSLRPRTFKDPRVL*PAGCGT Trigger: TGTCCCACAACCAGCTGGCCACAGTACCCGAGGGTC...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCGAAGCTGGTTGTTCTaGAAGGAGAGGTGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQQTPAPTALASSGQDRRSWLF*KERCLA Trigger: TGCTAGGCACCTCTCCTTGCAGAACAACCAGCTTCG...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | ACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGCACGCTCCAGCTTGTTaGCATAGAGGTGCAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTSYSRHLLLLLWPALGRHAPAC*HRGATC Trigger: ACACGTTGCACCTCTATGGCAACAAGCTGGAGCGTG...CCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCACTGATACGGTTAGCCTaGAGGTATAGCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTADTCSYCFGQLWAGQALIRLA*RYSSSR Trigger: CCTGGAGGAGCTATACCTGCAGGCTAACCGTATCAG...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCGTGGAAGGTGTTAGGTaGCAACCCGGTGTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTSYSRHLLLLLWPALGVEGVR*QPGVPQ Trigger: CTGAGGAACACCGGGTTGCCACCTAACACCTTCCAC...GCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR TCA 90 bp | CTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCGCTTCTCCCCAAAGGTaGGAGGAAAGATCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTSYSRHLLLLLWPALGASPQR*EERSPP Trigger: TGGTGGAGATCTTTCCTCTCACCTTTGGGGAGAAGC...GCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | ACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCATGCTTCTGCAAGGAGAGGTaGCTAGCAGCTCTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TICAGGCSLRPRTFKSACFCKER*LAALVI Trigger: TATCACCAGAGCTGCTAGGCACCTCTCCTTGCAGAA...GCATGCGGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | CTAACCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGACCCCTTGCTTTGTaGAGCCTTACAGCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTTSYSRHLLLLLWPALGRPLAL*SLTAST Trigger: CGTGGAAGCTGTAAGGCTGCACAAAGCAAGGGGTCT...GCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTTCTCCACCACTTCATTaGCAGCCAGATCGGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSVLEGVVCAPERSSSPPLH*QPDRRH Trigger: GTGTCGCCGATCTGGCTGCCAATGAAGTGGTGGAGA...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | TCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCTCAGTCTGTTGTTGTaGAGGTACACAGACCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSVLEGVVCAPERSSPLSLLL*RYTDRS Trigger: ACTCCGGTCTGTGTACCTCCACAACAACAGACTGAG...CGGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCAAAAGATAGCTCATTGTaGCTCAGGTCCAGCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTADTCSYCFGQLWAGQAKDSSL*LRSSTL Trigger: TAAGGTGCTGGACCTGAGCCACAATGAGCTATCTTT...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGCTTGCTGAAGGTAGTTaGATCCAGACCACTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLITICAGGCSLRPRTFKLAEGS*IQTTVC Trigger: ACAGACAGTGGTCTGGATGCAACTACCTTCAGCAAG...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR GCA 90 bp | GGCATCTGCTTTATTTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCAATTGCGACCCAGGTaGAATATGGTCAGAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GICFISSSPSVLEGVVCAQLRPR*NMVRVP Trigger: GGGAACTCTGACCATATTGCACCTGGGTCGCAATTG...GGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAAATAAAGCAGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCTGGTGATATTGTCTaGAAATATCCTCAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLITICAGGCSLRPRTFKSGDIV*KYPQVQ Trigger: CTGGACCTGAGGATATTTCCAGACAATATCACCAGA...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | CTCGCTGAGACCAGATCCCGCGCACCCAGCGCGGCCACGTGGTTGTaGGGCATTACCAGGGCCTGCAAGTGGCGGGGCAATGCGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAETRSRAPSAATWL*GITRACKWRGNAGG Trigger: GCCTCCCGCATTGCCCCGCCACTTGCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTCAGCGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS TCA 90 bp | GGCCAGGCTGTTGTAGGCCAGGTTGAGCTCGGCCAAGGCTCTCGCTaGGACCAGATCCCGCGCACCCAGCGCGGCCACGTGGTTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQAVVGQVELGQGSR*DQIPRTQRGHVVVG Trigger: CCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTCAGCGAGAGCCTTGGCCGAGCTCAACCTGGCCTACAACAGCCTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS TCA 90 bp | TCGGGGACAGGAGCAGCGCCAAGGACAGGGCCTCGGGAGGGGCTGTaGGCTGTCACCCAAGTGTGGGAAGGCAGGGTCCTCCGTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGTGAAPRTGPREGL*AVTQVWEGRVLRVC Trigger: GCACACACGGAGGACCCTGCCTTCCCACACTTGGGTGACAGCTCACAGCCCCTCCCGAGGCCCTGTCCTTGGCGCTGCTCCTGTCCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | AGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTTaGAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCCTCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPASCSGSRVRSWLR*SLSERKLAGRPSGS Trigger: GCTGCCTGAGGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | AAGGCTCTCGCTGAGACCAGATCCCGCGCACCCAGCGCGGCCACGTaGTTGTGGGGCATTACCAGGGCCTGCAAGTGGCGGGGCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: KALAETRSRAPSAAT*LWGITRACKWRGNA Trigger: CGCATTGCCCCGCCACTTGCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTCAGCGAGAGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS TCA 90 bp | CGCTGGGATGTACGTGTGCGCTGGCCAGGCTGTTGTAGGCCAGGTTaGGCTCGGCCAAGGCTCTCGCTGAGACCAGATCCCGCGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWDVRVRWPGCCRPG*ARPRLSLRPDPAHP Trigger: TGGGTGCGCGGGATCTGGTCTCAGCGAGAGCCTTGGCCGAGCTCAACCTGGCCTACAACAGCCTGGCCAGCGCACACGTACATCCCAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | AGAGGTGCAACGTGTGCAGGGCTCGCAGAGGCCTCAGCGTCCCCTTaGGCAGCGCCGAGGCCCCCAGCTTATTATGCTGCAGCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGATCAGLAEASASP*AAPRPPAYYAAAAG Trigger: ACCTGCTGCTGCAGCATAATAAGCTGGGGGCCTCGGCGCTGCCCAAGGGGACGCTGAGGCCTCTGCGAGCCCTGCACACGTTGCACCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | TATTCAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTTaGGTTGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSGRRAALAPESAVG*VAVSASANWRAGPQ Trigger: CTGAGGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | GTGCCAGGTGCCAGGCCCAATGTCGCCCACGCGGAGCCGATTGTGTaGCAAGTTCAGTTCCCGCAGCTTATTCAGGCCGGCGAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGARPNVAHAEPIV*QVQFPQLIQAGELL Trigger: GAGCAGCTCGCCGGCCTGAATAAGCTGCGGGAACTGAACTTGGCACACAATCGGCTCCGCGTGGGCGACATTGGGCCTGGCACCTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | AGCTTATTCAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTaGTTGCGTTGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFRPASCSGSRVRS*LRCSLSERKLAGRP Trigger: GGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGCAAGCGCGGCCACGTGGTaGTGGGGCATTACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTADTCSYCFGQLWAGQASAATW*WGITRA Trigger: GGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCT...TGCCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | TGCCAAGTTCAGTTCCCGCAGCTTATTCAGGCCGGCGAGCTGCTCTaGCTCCAGAGTCCGCAGTTGGTTGCGTTGCAGTCTCAGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CQVQFPQLIQAGELL*LQSPQLVALQSQRA Trigger: CGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCTGCGGGAACTGAACTTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | CTCCACCACTTCATTGGCAGCCAGATCGGCGACACGCAGGGAGCGTaGCAGGAACTGGGGCGCTACAGAAAGCTTGTTGTGGGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: LHHFIGSQIGDTQGA*QELGRYRKLVVGHI Trigger: TATGTGGCCCACAACAAGCTTTCTGTAGCGCCCCAGTTCCTGCCACGCTCCCTGCGTGTCGCCGATCTGGCTGCCAATGAAGTGGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | GGCCCCCAGCTTATTATGCTGCAGCAGCAGGTAGCGCAGACCCCTTaGTTTGTGCAGCCTTACAGCTTCCACGTGCCGGATGCAATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPQLIMLQQQVAQTP*FVQPYSFHVPDAIA Trigger: CGCAATTGCATCCGGCACGTGGAAGCTGTAAGGCTGCACAAAGCAAGGGGTCTGCGCTACCTGCTGCTGCAGCATAATAAGCTGGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | TTGTGTGCCAAGTTCAGTTCCCGCAGCTTATTCAGGCCGGCGAGCTaGTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTTGCAGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCAKFSSRSLFRPAS*SGSRVRSWLRCSLS Trigger: GCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCTGCGGGAACTGAACTTGGCACACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGAATCTCCACCACTTCATaGGCAGCCAGATCGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: PPLTADTCSYCFGQLWAGISTTS*AARSAT Trigger: TGTCGCCGATCTGGCTGCCAATGAAGTGGTGGAGAT...TCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGGTAGCGCAGACCCCTaGCTTTGTGCAGCCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LITICAGGCSLRPRTFKSGSADP*LCAALQ Trigger: CTGTAAGGCTGCACAAAGCAAGGGGTCTGCGCTACC...GGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTAGCTCCCGAAGCTGGTaGTTCTGCAAGGAGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSVLEGVVCAPERSSSSRSW*FCKERC Trigger: GCACCTCTCCTTGCAGAACAACCAGCTTCGGGAGCT...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | ACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCCGCATGCGCTCCTCTGGGCACCTaGGAGATAAGATTGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TICAGGCSLRPRTFKSACAPLGT*EIRLFC Trigger: GCAGAACAATCTTATCTCCAAGGTGCCCAGAGGAGC...GCATGCGGACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | TCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCGCAGACCCCTTGCTTaGTGCAGCCTTACAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSVLEGVVCAPERSSRRPLA*CSLTAS Trigger: GGAAGCTGTAAGGCTGCACAAAGCAAGGGGTCTGCG...ACTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CCACCTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGAAAGTTCTCTAGCTGGTaGAGGGACTCAAAGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPLTADTCSYCFGQLWAGKFSSW*RDSKAS Trigger: TGAGGCCTTTGAGTCCCTCAACCAGCTAGAGAACTT...TCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGGTGTTCCTCAGTCTGTaGTTGTGGAGGTACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQQTPAPTALASSGQDRVFLSL*LWRYTD Trigger: GTCTGTGTACCTCCACAACAACAGACTGAGGAACAC...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGCAGACACCTGCTCCTACTGCTTTGGCCAGCTCTGGGCAGGACAGGGCAGCTCTGGTGATATaGTCTGGAAATATCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLQQTPAPTALASSGQDRAALVI*SGNILR Trigger: CCTGAGGATATTTCCAGACAATATCACCAGAGCTGC...CCTGTCCTGCCCAGAGCTGGCCAAAGCAGTAGGAGCAGGTGTCTGCTGTAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS-3UTR CAA 90 bp | TTCCTCATCACCATCTGTGCTGGAGGGTGTAGTCTGCGCCCCAGAACGTTCAAGTCAAGGCTGCTCAGCTaGCTGAAGGTAGTTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FLITICAGGCSLRPRTFKSRLLS*LKVVAS Trigger: GGATGCAACTACCTTCAGCAAGCTGAGCAGCCTTGA...CTTGAACGTTCTGGGGCGCAGACTACACCCTCCAGCACAGATGGTGATGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS TCA 90 bp | CCACTGTCTGTCAACTGGTTATGCTGGAGATACAACTCACGGAGGTaGGTCTGGAGGCTCAGTGCTCCTCTGGGCACCTTGGAGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSVNWLCWRYNSRR*VWRLSAPLGTLEIR Trigger: TCTTATCTCCAAGGTGCCCAGAGGAGCACTGAGCCTCCAGACTCACCTCCGTGAGTTGTATCTCCAGCATAACCAGTTGACAGACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | GTTATGCTGGAGATACAACTCACGGAGGTGAGTCTGGAGGCTCAGTaGTCCTCTGGGCACCTTGGAGATAAGATTGTTCTGCAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMLEIQLTEVSLEAQ*SSGHLGDKIVLQVK Trigger: CTTCACCTGCAGAACAATCTTATCTCCAAGGTGCCCAGAGGAGCACTGAGCCTCCAGACTCACCTCCGTGAGTTGTATCTCCAGCATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 90 bp | GTTGTTCTGCAAGGAGAGGTGCCTAGCAGCTCTGGTGATATTGTCTaGAAATATCCTCAGGTCCAGACCAGCACAGTCCACCGTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VVLQGEVPSSSGDIV*KYPQVQTSTVHRVI Trigger: GATGACACGGTGGACTGTGCTGGTCTGGACCTGAGGATATTTCCAGACAATATCACCAGAGCTGCTAGGCACCTCTCCTTGCAGAACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 90 bp | GGACAGGTCCAAGTACTCAAGGCTGCTCAGCTTGCTGAAGGTAGTTaGATCCAGACCACTGTCTGTCAACTGGTTATGCTGGAGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: GQVQVLKAAQLAEGS*IQTTVCQLVMLEIQ Trigger: TTGTATCTCCAGCATAACCAGTTGACAGACAGTGGTCTGGATGCAACTACCTTCAGCAAGCTGAGCAGCCTTGAGTACTTGGACCTGTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | GAGACCAGATCCCGCGCACCCAGCGCGGCCACGTGGTaGTGGGGCATTACCAGGGCCTGCAAGTGGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ETRSRAPSAATW*WGITRACKWRG Trigger: GCCCCGCCACTTGCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | GCTCTCGCTGAGACCAGATCCCGCGCACCCAGCGCGGCCACGTGGTaGTGGGGCATTACCAGGGCCTGCAAGTGGCGGGGCAATGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALAETRSRAPSAATW*WGITRACKWRGNAG Trigger: TCCCGCATTGCCCCGCCACTTGCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTCAGCGAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | GCAGCCGGGTCAACTGGTTACCAGCCAGGTCCAAGCTaGGCAGGGCGCGCAGGCGGCGGAAAGCGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAGSTGYQPGPS*AGRAGGGKRWD Trigger: ATCCCAGCGCTTTCCGCCGCCTGCGCGCCCTGCGCAGCTTGGACCTGGCTGGTAACCAGTTGACCCGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | GCTGAGACCAGATCCCGCGCACCCAGCGCGGCCACGTaGTTGTGGGGCATTACCAGGGCCTGCAAGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AETRSRAPSAAT*LWGITRACKWR Trigger: CCGCCACTTGCAGGCCCTGGTAATGCCCCACAACCACGTGGCCGCGCTGGGTGCGCGGGATCTGGTCTCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | CCAAGCTGCGCAGGGCGCGCAGGCGGCGGAAAGCGCTaGGATGTACGTGTGCGCTGGCCAGGCTGTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCAGRAGGGKR*DVRVRWPGCCR Trigger: CCTACAACAGCCTGGCCAGCGCACACGTACATCCCAGCGCTTTCCGCCGCCTGCGCGCCCTGCGCAGCTTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | CAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTaGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCCTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QAGELLWLQSPQLVA*QSQRAQTGGQALRQ Trigger: CTGCCTGAGGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | TGGCTCAGGTCCAGCACCTTAAGTGCCTGCAGCTCGTaGCAGGTGCCAGGCCCAATGTCGCCCACGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WLRSSTLSACSS*QVPGPMSPTRS Trigger: GCTCCGCGTGGGCGACATTGGGCCTGGCACCTGGCACGAGCTGCAGGCACTTAAGGTGCTGGACCTGAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | ACGTGTGCAGGGCTCGCAGAGGCCTCAGCGTCCCCTTaGGCAGCGCCGAGGCCCCCAGCTTATTATGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TCAGLAEASASP*AAPRPPAYYAA Trigger: TGCAGCATAATAAGCTGGGGGCCTCGGCGCTGCCCAAGGGGACGCTGAGGCCTCTGCGAGCCCTGCACACGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | AACGTGTGCAGGGCTCGCAGAGGCCTCAGCGTCCCCTaGGGCAGCGCCGAGGCCCCCAGCTTATTATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NVCRARRGLSVP*GSAEAPSLLCC Trigger: GCAGCATAATAAGCTGGGGGCCTCGGCGCTGCCCAAGGGGACGCTGAGGCCTCTGCGAGCCCTGCACACGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | CCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTaGCGTTGCAGTCTCAGCGAGCGCAAACTGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PASCSGSRVRSW*RCSLSERKLAG Trigger: GCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | AGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTTaGAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSGSRVRSWLR*SLSERKLAGRP Trigger: GGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | AGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTaGTTGCGTTGCAGTCTCAGCGAGCGCAAACTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPASCSGSRVRS*LRCSLSERKLA Trigger: CGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | GAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTaGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ELLWLQSPQLVA*QSQRAQTGGQA Trigger: GGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | CAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTaGGTTGCGTTGCAGTCTCAGCGAGCGCAAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QAGELLWLQSPQ*VALQSQRAQTG Trigger: GCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | CAGCTTATTCAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTaGGTTGCGTTGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLIQAGELLWLQSPQ*VALQSQRAQTGGQA Trigger: GGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | AGCTCGTGCCAGGTGCCAGGCCCAATGTCGCCCACGCGGAGCCGATaGTGTGCCAAGTTCAGTTCCCGCAGCTTATTCAGGCCGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCQVPGPMSPTRSR*CAKFSSRSLFRPAS Trigger: GCTCGCCGGCCTGAATAAGCTGCGGGAACTGAACTTGGCACACAATCGGCTCCGCGTGGGCGACATTGGGCCTGGCACCTGGCACGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | TTATTCAGGCCGGCGAGCTGCTCTGGCTCCAGAGTCCGCAGTTGGTaGCGTTGCAGTCTCAGCGAGCGCAAACTGGCGGGCAGGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LFRPASCSGSRVRSW*RCSLSERKLAGRPS Trigger: TGAGGGCCTGCCCGCCAGTTTGCGCTCGCTGAGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | AAGGCCTCATCAGGCAGGCCCTCAGAGGTGATGAGGTaGCTATGCAGGTCCAGGGTGCGCAAGCCGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KASSGRPSEVMR*LCRSRVRKPLR Trigger: CCTCAGCGGCTTGCGCACCCTGGACCTGCATAGCAACCTCATCACCTCTGAGGGCCTGCCTGATGAGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | CAGTTCCCGCAGCTTATTCAGGCCGGCGAGCTGCTCTaGCTCCAGAGTCCGCAGTTGGTTGCGTTGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QFPQLIQAGELL*LQSPQLVALQS Trigger: AGACTGCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCTGCGGGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | GCAGGCTTCTCCCCAAAGGTGAGAGGAAAGATCTCCACCACTTCATaGGCAGCCAGATCGGCGACACGCAGGGAGCGTGGCAGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGFSPKVRGKISTTS*AARSATRRERGRNW Trigger: CCAGTTCCTGCCACGCTCCCTGCGTGTCGCCGATCTGGCTGCCAATGAAGTGGTGGAGATCTTTCCTCTCACCTTTGGGGAGAAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | ACAGCTTCCACGTGCCGGATGCAATTGCGACCCAGGTaGAATATGGTCAGAGTTCCCGGCAGACCCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TASTCRMQLRPR*NMVRVPGRPSG Trigger: ACCCGAGGGTCTGCCGGGAACTCTGACCATATTGCACCTGGGTCGCAATTGCATCCGGCACGTGGAAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | AAGTTCAGTTCCCGCAGCTTATTCAGGCCGGCGAGCTaGTCTGGCTCCAGAGTCCGCAGTTGGTTGCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KFSSRSLFRPAS*SGSRVRSWLRC Trigger: GCAACGCAACCAACTGCGGACTCTGGAGCCAGAGCAGCTCGCCGGCCTGAATAAGCTGCGGGAACTGAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | TTCATTGGCAGCCAGATCGGCGACACGCAGGGAGCGTaGCAGGAACTGGGGCGCTACAGAAAGCTTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FIGSQIGDTQGA*QELGRYRKLVV Trigger: CACAACAAGCTTTCTGTAGCGCCCCAGTTCCTGCCACGCTCCCTGCGTGTCGCCGATCTGGCTGCCAATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | TCCTCCAGGGCCTCAGGCAGATCAGGGGGCACAAAAGATAGCTCATaGTGGCTCAGGTCCAGCACCTTAAGTGCCTGCAGCTCGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRASGRSGGTKDSS*WLRSSTLSACSSCQ Trigger: CTGGCACGAGCTGCAGGCACTTAAGGTGCTGGACCTGAGCCACAATGAGCTATCTTTTGTGCCCCCTGATCTGCCTGAGGCCCTGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | AGGCCCCCAGCTTATTATGCTGCAGCAGCAGGTAGCGCAGACCCCTaGCTTTGTGCAGCCTTACAGCTTCCACGTGCCGGATGCAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPAYYAAAAGSADP*LCAALQLPRAGCNC Trigger: GCAATTGCATCCGGCACGTGGAAGCTGTAAGGCTGCACAAAGCAAGGGGTCTGCGCTACCTGCTGCTGCAGCATAATAAGCTGGGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | TTAGGTGGCAACCCGGTGTTCCTCAGTCTGTTGTTGTaGAGGTACACAGACCGGAGTGCAGGCTTCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGGNPVFLSLLL*RYTDRSAGFSP Trigger: TGGGGAGAAGCCTGCACTCCGGTCTGTGTACCTCCACAACAACAGACTGAGGAACACCGGGTTGCCACCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | GCTTATTATGCTGCAGCAGCAGGTAGCGCAGACCCCTaGCTTTGTGCAGCCTTACAGCTTCCACGTGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AYYAAAAGSADP*LCAALQLPRAG Trigger: TCCGGCACGTGGAAGCTGTAAGGCTGCACAAAGCAAGGGGTCTGCGCTACCTGCTGCTGCAGCATAATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | GCCTCAGGCAGATCAGGGGGCACAAAAGATAGCTCATaGTGGCTCAGGTCCAGCACCTTAAGTGCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGRSGGTKDSS*WLRSSTLSACS Trigger: GCTGCAGGCACTTAAGGTGCTGGACCTGAGCCACAATGAGCTATCTTTTGTGCCCCCTGATCTGCCTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS TCA 72 bp | GTCAACTGGTTATGCTGGAGATACAACTCACGGAGGTaGGTCTGGAGGCTCAGTGCTCCTCTGGGCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VNWLCWRYNSRR*VWRLSAPLGTL Trigger: CAAGGTGCCCAGAGGAGCACTGAGCCTCCAGACTCACCTCCGTGAGTTGTATCTCCAGCATAACCAGTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | GGTGGTAATAACCTCCGAGCCGTGGAAGGTGTTAGGTaGCAACCCGGTGTTCCTCAGTCTGTTGTTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGNNLRAVEGVR*QPGVPQSVVVE Trigger: CTCCACAACAACAGACTGAGGAACACCGGGTTGCCACCTAACACCTTCCACGGCTCGGAGGTTATTACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 90 bp | AGCTGGTTGTTCTGCAAGGAGAGGTGCCTAGCAGCTCTGGTGATATaGTCTGGAAATATCCTCAGGTCCAGACCAGCACAGTCCACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWLFCKERCLAALVI*SGNILRSRPAQSTV Trigger: CACGGTGGACTGTGCTGGTCTGGACCTGAGGATATTTCCAGACAATATCACCAGAGCTGCTAGGCACCTCTCCTTGCAGAACAACCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | GAGATACAACTCACGGAGGTGAGTCTGGAGGCTCAGTaGTCCTCTGGGCACCTTGGAGATAAGATTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EIQLTEVSLEAQ*SSGHLGDKIVL Trigger: CAGAACAATCTTATCTCCAAGGTGCCCAGAGGAGCACTGAGCCTCCAGACTCACCTCCGTGAGTTGTATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CCA 72 bp | CAAGGAGAGGTGCCTAGCAGCTCTGGTGATATTGTCTaGAAATATCCTCAGGTCCAGACCAGCACAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGEVPSSSGDIV*KYPQVQTSTVH Trigger: GTGGACTGTGCTGGTCTGGACCTGAGGATATTTCCAGACAATATCACCAGAGCTGCTAGGCACCTCTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS CAA 72 bp | TTCTGCAAGGAGAGGTGCCTAGCAGCTCTGGTGATATaGTCTGGAAATATCCTCAGGTCCAGACCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FCKERCLAALVI*SGNILRSRPAQ Trigger: CTGTGCTGGTCTGGACCTGAGGATATTTCCAGACAATATCACCAGAGCTGCTAGGCACCTCTCCTTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||
| CDS GCA 72 bp | CAAGTACTCAAGGCTGCTCAGCTTGCTGAAGGTAGTTaGATCCAGACCACTGTCTGTCAACTGGTTATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QVLKAAQLAEGS*IQTTVCQLVML Trigger: CAGCATAACCAGTTGACAGACAGTGGTCTGGATGCAACTACCTTCAGCAAGCTGAGCAGCCTTGAGTACTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093380.5 |
||