Pregenerated sensors for POC1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019952Ensembl transcript IDs: ENSMUST00000020113.15, ENSMUST00000159043.2, ENSMUST00000159228.8, ENSMUST00000159990.2, ENSMUST00000219884.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTTCGGTTTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTaGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: PFRFRCSPSEESVSA*QGCGRPRLPPECVS Trigger: GCTCACACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAAACCGAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR TCA 90 bp | CCTCGCTCACGGCCCTCCCTGCTCAGCTCTTCTGTTGGACAGCGCTaGAAAGCTTTTGCTGATTCTCAAGGCAGTCTCTCAGCTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: PRSRPSLLSSSVGQR*KAFADSQGSLSAYL Trigger: AAGATAAGCTGAGAGACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGAAGAGCTGAGCAGGGAGGGCCGTGAGCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR GCA 90 bp | AGAATTGAAACAGTCTGGGTTAGGATGTTGAGTTGTTCCATAATGTaGTCCAGTGCGTCAGCCACCGCCAGCGGGACGCTCCTCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RIETVWVRMLSCSIM*SSASATASGTLLRL Trigger: AAGCCTGAGGAGCGTCCCGCTGGCGGTGGCTGACGCACTGGAGCACATTATGGAACAACTCAACATCCTAACCCAGACTGTTTCAATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR CCA 90 bp | CTCTCCATTCCCACACCATTGTTTCTCCATTTTTCTGTACACAGATaGCATCTGCCCCTGCTACACAGCCGTGCCGGCCTTTGTTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSIPTPLFLHFSVHR*HLPLLHSRAGLCSV Trigger: CACAGAACAAAGGCCGGCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTGGGAATGGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR TCA 90 bp | GGGATTAATTTCAATAGTCTCCTTTCTGTCTTCATGGGAATGCGGTaGCCGTGGGTAGATGTCAAGAAGGTGTGGGGAGGCCTCAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: GINFNSLLSVFMGMR*PWVDVKKVWGGLKV Trigger: CACTTTGAGGCCTCCCCACACCTTCTTGACATCTACCCACGGTCACCGCATTCCCATGAAGACAGAAAGGAGACTATTGAAATTAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR TCA 90 bp | CTCCCTGCTCAGCTCTTCTGTTGGACAGCGCTGAAAAGCTTTTGCTaGTTCTCAAGGCAGTCTCTCAGCTTATCTTCTGTCAAAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: LPAQLFCWTALKSFC*FSRQSLSLSSVKDS Trigger: ACTGTCTTTGACAGAAGATAAGCTGAGAGACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGAAGAGCTGAGCAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR TCA 90 bp | AAAGAACTACGAGCCAGCTCAGTTTTCTACATCTCAGATGCTATCTaGAAGCAAGCGAATGGTTTCCCCTCAAGGCTGTGCTCACCTAAG | + |
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Preference number: 1 (lower is better) Translates to: KELRASSVFYISDAI*KQANGFPSRLCSPK Trigger: CTTAGGTGAGCACAGCCTTGAGGGGAAACCATTCGCTTGCTTTCAGATAGCATCTGAGATGTAGAAAACTGAGCTGGCTCGTAGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR TCA 90 bp | CCGTCCTTCGAAAATGAAACGGTAAAGACGGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTTCCCTCTATGAGATCCAGCATCTTA | + |
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Preference number: 1 (lower is better) Translates to: PSFENETVKTGPVCP*SVYMSLPSMRSSIL Trigger: TAAGATGCTGGATCTCATAGAGGGAAGACTCATATACACACTTCAAGGACATACGGGGCCCGTCTTTACCGTTTCATTTTCGAAGGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR GCA 90 bp | GAAACACATTCATTACCTTCAGGAACTGCCTGGGCATGGTCATTCTaGGATGGTGCAACAATAAAATCTAGAGGTCCGCTTACTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ETHSLPSGTAWAWSF*DGATIKSRGPLTFL Trigger: CAGGAAAGTAAGCGGACCTCTAGATTTTATTGTTGCACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGAATGTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR GCA 90 bp | GCATTAACAAAGGGTTCAAGAAATACCTACAGATGTCTTCACCCTTaGCTGGCACAGCTCGATAGGTGGAATCCGTCATTGTGGTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: ALTKGSRNTYRCLHP*LAQLDRWNPSLWLN Trigger: ATTCAACCACAATGACGGATTCCACCTATCGAGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAACCCTTTGTTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR GCA 90 bp | TTCTCAAGGCAGTCTCTCAGCTTATCTTCTGTCAAAGACAGTCGCTaGTCCAGAATTGAAACAGTCTGGGTTAGGATGTTGAGTTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: FSRQSLSLSSVKDSR*SRIETVWVRMLSCS Trigger: GGAACAACTCAACATCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGACTGTCTTTGACAGAAGATAAGCTGAGAGACTGCCTTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR CCA 90 bp | TCCTTGACATTGATTTGTGTGTTTAAGTCAGTCCCTGAGAATGCCTaGAACCTTTTCGGTTTCGTTGCTCACCCTCTGAAGAATCGGTTA | + |
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Preference number: 1 (lower is better) Translates to: SLTLICVFKSVPENA*NLFGFVAHPLKNRL Trigger: TAACCGATTCTTCAGAGGGTGAGCAACGAAACCGAAAAGGTTCCAGGCATTCTCAGGGACTGACTTAAACACACAAATCAATGTCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR CCA 90 bp | CGGAGGGCACATCACTTACATCTTCTGGTCTCTTTTTCACAGTTGTaGATGAACATTCTGGCATTAACAAAGGGTTCAAGAAATACCTAC | + |
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Preference number: 1 (lower is better) Translates to: RRAHHLHLLVSFSQL*MNILALTKGSRNTY Trigger: GTAGGTATTTCTTGAACCCTTTGTTAATGCCAGAATGTTCATCCACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGATGTGCCCTCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR TCA 90 bp | GTTCATAACTTTATTACTGCAATTAGACCTGGGAGGAGCATAACTTaGTCCTTGACATTGATTTGTGTGTTTAAGTCAGTCCCTGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: VHNFITAIRPGRSIT*SLTLICVFKSVPEN Trigger: ATTCTCAGGGACTGACTTAAACACACAAATCAATGTCAAGGATCAAGTTATGCTCCTCCCAGGTCTAATTGCAGTAATAAAGTTATGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACTTCTGGCGACTGACCTaGCCTCGCTCACGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYFWRLT*PRSRPS Trigger: GGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAA...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR TCA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTTTCTGGCGACTGACCTaGCCTCGCTCACGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESVSAWQGCGRPRLPPECFWRLT*PRSRPS Trigger: GGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAA...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGTGCGTGGCAGGGGTGTaGAAGGCCTCGGCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQCVAGV*KASATS Trigger: GGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCA...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGGAATCGGTTAGTGCGTaGCAGGGGTGTGGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQESVSA*QGCGRP Trigger: AGGCCTTCCACACCCCTGCCACGCACTAACCGATTC...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCACCTGTAACACCAGAGATGCGCACGTCCCATGCAGTTCCCACCAGACAATTCTGGCGACTGACCTaGCCTCGCTCACGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CSPVTPEMRTSHAVPTRQFWRLT*PRSRPS Trigger: GGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAA...TTGTCTGGTGGGAACTGCATGGGACGTGCGCATCTCTGGTGTTACAGGTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTAGGATGTTGAGTTGTTCCATAATGTGCTCCAGTGCGTCAGCCACCGCCTTCTGGCGACTGACCTaGCCTCGCTCACGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WVRMLSCSIMCSSASATAFWRLT*PRSRPS Trigger: GGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAA...GGCGGTGGCTGACGCACTGGAGCACATTATGGAACAACTCAACATCCTAACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAGAATCGGTTAGTGCGTaGCAGGGGTGTGGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPSEESVSAWQGCGRPRLESVSA*QGCGRP Trigger: AGGCCTTCCACACCCCTGCCACGCACTAACCGATTC...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCAAGCGAATGGTTTCCCCTCAAGGCTGTGCTCACCTAAGAAACACATTCTGCGTGGCAGGGGTGTaGAAGGCCTCGGCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESKRMVSPQGCAHLRNTFCVAGV*KASATS Trigger: GGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCA...GAATGTGTTTCTTAGGTGAGCACAGCCTTGAGGGGAAACCATTCGCTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR GCA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTTTCCCCTCAAGGCTGTaGTCACCTAAGAAACACATT | + |
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Preference number: 2 (lower is better) Translates to: ESVSAWQGCGRPRLPPECFPSRL*SPKKHI Trigger: AATGTGTTTCTTAGGTGAGCACAGCCTTGAGGGGAA...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGGTCAGAACCTGCTGAAGCGATGCATGTGCCGTTGGGGTTAAAATCCACACAACCTTCCGTCAGGTaGAAATCTTGGCAGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: AWSEPAEAMHVPLGLKSTQPSVR*KSWQGA Trigger: AGCGCCCTGCCAAGATTTTCACCTGACGGAAGGTTG...TGTGGATTTTAACCCCAACGGCACATGCATCGCTTCAGCAGGTTCTGACCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGTGGGCATGGTCATTCTaGGATGGTGCAACAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQWAWSF*DGATIK Trigger: TTTTATTGTTGCACCATCGCAGAATGACCATGCCCA...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACACACAGGAGACAGAAGAGAAAAGCAGCTCAGAGGCACAAAACCGAAACCGAATCGGTTAGTGCGTaGCAGGGGTGTGGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TTHRRQKRKAAQRHKTETESVSA*QGCGRP Trigger: AGGCCTTCCACACCCCTGCCACGCACTAACCGATTC...GGTTTCGGTTTTGTGCCTCTGAGCTGCTTTTCTCTTCTGTCTCCTGTGTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR CAA 90 bp | GGCCCTCCCTGCTCAGCTCTTCTGTTGGACAGCGCTGAAAAGCTTTaGCTGATTCTCAAGGCAGTCTCTCAGCTTATCTTCTGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPPCSALLLDSAEKL*LILKAVSQLIFCQR Trigger: TCTTTGACAGAAGATAAGCTGAGAGACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGAAGAGCTGAGCAGGGAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCAGAGGCACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACGGCTTTTTAGCGTACTaGAAGCACACAGGCATAATC | + |
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Preference number: 2 (lower is better) Translates to: QLRGTKPKPLGEQPLHSHGFLAY*KHTGII Trigger: GATTATGCCTGTGTGCTTTCAGTACGCTAAAAAGCC...GTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGTGCCTCTGAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR CCA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTATCACTTACATCTTCTaGTCTCTTTTTCACAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: ESVSAWQGCGRPRLPPECITYIF*SLFHSC Trigger: ACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGAT...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCAGAGGCACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACATCTCAGATGCTATCTaGAAGCAAGCGAATGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: QLRGTKPKPLGEQPLHSHISDAI*KQANGF Trigger: GAAACCATTCGCTTGCTTTCAGATAGCATCTGAGAT...GTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGTGCCTCTGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGCAGACTCTTTTTGACCTaGAAGAACTACGAGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VSPFFCTQMASAPATQPCRLFLT*KNYEPA Trigger: AGCTGGCTCGTAGTTCTTTCAGGTCAAAAAGAGTCT...GCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGAAGGCAGACTCTTTTTaGCCTGAAAGAACTACGAGC | + |
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Preference number: 2 (lower is better) Translates to: CFSIFLYTDGICPCYTAVKADSF*PERTTS Trigger: GCTCGTAGTTCTTTCAGGTCAAAAAGAGTCTGCCTT...CACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCCCTCTATGAGATCCAGCATCTTAACTGTTCCATCAGAAGAGGCGGTGCTGTTACCCAAAGGATaGAAGGACAGACAGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SLPSMRSSILTVPSEEAVLLPKG*KDRQFT Trigger: TGTGAACTGTCTGTCCTTCCATCCTTTGGGTAACAG...CACCGCCTCTTCTGATGGAACAGTTAAGATGCTGGATCTCATAGAGGGAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACTAATCACAAGCAGCTaGTTCTTGCTGTGGCAATAC | + |
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Preference number: 2 (lower is better) Translates to: HTIVSPFFCTQMASAPATLITSS*FLLWQY Trigger: GTATTGCCACAGCAAGAATCAGCTGCTTGTGATTAG...TGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACATGGGCATGGTCATTCTaGGATGGTGCAACAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: HTIVSPFFCTQMASAPATWAWSF*DGATIK Trigger: TTTTATTGTTGCACCATCGCAGAATGACCATGCCCA...TGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGCATGTGATTCATGTGTaGATCCTTTTCATCATTTTG | + |
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Preference number: 2 (lower is better) Translates to: CFSIFLYTDGICPCYTAVHVIHV*ILFIIL Trigger: CAAAATGATGAAAAGGATGCACACATGAATCACATG...CACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTGAGGTTTCTTTTAGGATCTTTACAGTGCAGGTGAATGAAGTTGGTCCTGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SFEVSFRIFTVQVNEVGPGPVCP*SVYMSL Trigger: AAGACTCATATACACACTTCAAGGACATACGGGGCC...AGGACCAACTTCATTCACCTGCACTGTAAAGATCCTAAAAGAAACCTCAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATTTGTTCATTCTTATATCCCAGATTTTCACAGCATGGTCAGAACCTGCTGAAATCCTACAGAGTCTaGGAAGTTATTAACGCACTG | + |
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Preference number: 2 (lower is better) Translates to: VICSFLYPRFSQHGQNLLKSYRV*EVINAL Trigger: CAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTT...CAGCAGGTTCTGACCATGCTGTGAAAATCTGGGATATAAGAATGAACAAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| 3UTR TCA 72 bp | CTACCTCCAGAGTGTGTGAGCCCGTCTTCTGGCGACTaGCCTGACCTCGCTCACGGCCCTCCCTGCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LPPECVSPSSGD*PDLAHGPPCSA Trigger: AGCTGAGCAGGGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAAGACGGGCTCACACACTCTGGAGGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR TCA 72 bp | TCCAGAGTGTGTGAGCCCGTCTTCTGGCGACTGACCTaGCCTCGCTCACGGCCCTCCCTGCTCAGCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SRVCEPVFWRLT*PRSRPSLLSSS Trigger: AGAAGAGCTGAGCAGGGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAGAAGACGGGCTCACACACTCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR GCA 72 bp | TGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTaGCGGCCTTTGTTCTGTGTGCCCAGAGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: CTQMASAPATQP*RPLFCVPRASC Trigger: GCAGCTGGCTCTGGGCACACAGAACAAAGGCCGGCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| 3UTR GCA 72 bp | ACAGTCTGGGTTAGGATGTTGAGTTGTTCCATAATGTaGTCCAGTGCGTCAGCCACCGCCAGCGGGACGCTC | + |
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Preference number: 3 (lower is better) Translates to: TVWVRMLSCSIM*SSASATASGTL Trigger: GAGCGTCCCGCTGGCGGTGGCTGACGCACTGGAGCACATTATGGAACAACTCAACATCCTAACCCAGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR-3UTR CAA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGTCTGGGTTAGGATGTaGAGTTGTTCCATAATGTGC | + |
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Preference number: 3 (lower is better) Translates to: ESVSAWQGCGRPRLPPECVWVRM*SCSIMC Trigger: GCACATTATGGAACAACTCAACATCCTAACCCAGAC...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
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| 3UTR TCA 72 bp | CGGCCCTCCCTGCTCAGCTCTTCTGTTGGACAGCGCTaGAAAGCTTTTGCTGATTCTCAAGGCAGTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RPSLLSSSVGQR*KAFADSQGSLS Trigger: TGAGAGACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGAAGAGCTGAGCAGGGAGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR CCA 72 bp | CCCACACCATTGTTTCTCCATTTTTCTGTACACAGATaGCATCTGCCCCTGCTACACAGCCGTGCCGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTPLFLHFSVHR*HLPLLHSRAGL Trigger: AAGGCCGGCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR TCA 72 bp | TTCAATAGTCTCCTTTCTGTCTTCATGGGAATGCGGTaGCCGTGGGTAGATGTCAAGAAGGTGTGGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FNSLLSVFMGMR*PWVDVKKVWGG Trigger: GCCTCCCCACACCTTCTTGACATCTACCCACGGTCACCGCATTCCCATGAAGACAGAAAGGAGACTATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| 3UTR GCA 72 bp | CATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTaGCCCTGCTACACAGCCGTGCCGGCCTTTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HCFSIFLYTDGI*PCYTAVPAFVL Trigger: CAGAACAAAGGCCGGCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR GCA 72 bp | AAGGGTTCAAGAAATACCTACAGATGTCTTCACCCTTaGCTGGCACAGCTCGATAGGTGGAATCCGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: KGSRNTYRCLHP*LAQLDRWNPSL Trigger: CAATGACGGATTCCACCTATCGAGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR CCA 72 bp | GTTCAAGAAATACCTACAGATGTCTTCACCCTTGCCTaGCACAGCTCGATAGGTGGAATCCGTCATTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VQEIPTDVFTLA*HSSIGGIRHCG Trigger: ACCACAATGACGGATTCCACCTATCGAGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAAGCAGCTGATTCTTGCTGTGGCAATACTGAGGGAGGGAGCATGGTTTCATGGGAGGAGCATAACTaGATCCTTGACATTGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQAADSCCGNTEGGSMVSWEEHN*ILDIDL Trigger: CAAATCAATGTCAAGGATCAAGTTATGCTCCTCCCA...TGAAACCATGCTCCCTCCCTCAGTATTGCCACAGCAAGAATCAGCTGCTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR GCA 72 bp | TCATTACCTTCAGGAACTGCCTGGGCATGGTCATTCTaGGATGGTGCAACAATAAAATCTAGAGGTCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPSGTAWAWSF*DGATIKSRGPL Trigger: AAGCGGACCTCTAGATTTTATTGTTGCACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR GCA 72 bp | GCTCACCTAAGAAACACATTCATTACCTTCAGGAACTaGCTGGGCATGGTCATTCTGCGATGGTGCAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: AHLRNTFITFRN*LGMVILRWCNN Trigger: ATTGTTGCACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGAATGTGTTTCTTAGGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR TCA 72 bp | GAGGGAGCATGGTTTCAAGGCAGACTCTTTTTGACCTaGAAGAACTACGAGCCAGCTCAGTTTTCTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: EGAWFQGRLFLT*KNYEPAQFSTS Trigger: AGATGTAGAAAACTGAGCTGGCTCGTAGTTCTTTCAGGTCAAAAAGAGTCTGCCTTGAAACCATGCTCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR TCA 72 bp | GAAAATGAAACGGTAAAGACGGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTTCCCTCTATGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: ENETVKTGPVCP*SVYMSLPSMRS Trigger: GGATCTCATAGAGGGAAGACTCATATACACACTTCAAGGACATACGGGGCCCGTCTTTACCGTTTCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| 3UTR GCA 72 bp | CAGTCTCTCAGCTTATCTTCTGTCAAAGACAGTCGCTaGTCCAGAATTGAAACAGTCTGGGTTAGGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QSLSLSSVKDSR*SRIETVWVRML Trigger: CAACATCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGACTGTCTTTGACAGAAGATAAGCTGAGAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR CCA 72 bp | GTCAAAGACAGTCGCTGCTCCAGAATTGAAACAGTCTaGGTTAGGATGTTGAGTTGTTCCATAATGTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VKDSRCSRIETV*VRMLSCSIMCS Trigger: GGAGCACATTATGGAACAACTCAACATCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGACTGTCTTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGGTTTCAAGGCAGACTCTTTTTGACCTGAAAGAACTACGAGCCAGCTCATGGGAGGAGCATAACTaGATCCTTGACATTGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SMVSRQTLFDLKELRASSWEEHN*ILDIDL Trigger: CAAATCAATGTCAAGGATCAAGTTATGCTCCTCCCA...TGAGCTGGCTCGTAGTTCTTTCAGGTCAAAAAGAGTCTGCCTTGAAACCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAACAGTCTGGGTTAGGATGTTGAGTTGTTCCATAATGTGCTCCAGTGCGTCAAATCCGTCATTGTGGTaGAATCGAAAGAAAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: ETVWVRMLSCSIMCSSASNPSLW*NRKKGH Trigger: ATGTCCTTTCTTTCGATTCAACCACAATGACGGATT...TGACGCACTGGAGCACATTATGGAACAACTCAACATCCTAACCCAGACTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR TCA 72 bp | CTTTTGAGGTTTCTTTTAGGATCTTTACAGTGCAGGTaGATGAAGTTGGTCCTCCAAATCAAGACCTGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLRFLLGSLQCR*MKLVLQIKTCA Trigger: TGCGCAGGTCTTGATTTGGAGGACCAACTTCATTCACCTGCACTGTAAAGATCCTAAAAGAAACCTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| 3UTR CCA 72 bp | GAAACACATTCATTACCTTCAGGAACTGCCTGGGCATaGTCATTCTGCGATGGTGCAACAATAAAATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ETHSLPSGTAWA*SFCDGATIKSR Trigger: TCTAGATTTTATTGTTGCACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGAATGTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| 3UTR CCA 72 bp | CATCACTTACATCTTCTGGTCTCTTTTTCACAGTTGTaGATGAACATTCTGGCATTAACAAAGGGTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HHLHLLVSFSQL*MNILALTKGSR Trigger: TCTTGAACCCTTTGTTAATGCCAGAATGTTCATCCACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| 3UTR TCA 72 bp | TTTATTACTGCAATTAGACCTGGGAGGAGCATAACTTaGTCCTTGACATTGATTTGTGTGTTTAAGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FITAIRPGRSIT*SLTLICVFKSV Trigger: GACTGACTTAAACACACAAATCAATGTCAAGGATCAAGTTATGCTCCTCCCAGGTCTAATTGCAGTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| 3UTR GCA 72 bp | GCAAATCCTACAGAGTCTGAGAAGTTATTAACGCACTaGTTATTGGTAGTGTCCCAAATTTTAATAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ANPTESEKLLTH*LLVVSQILIVL Trigger: TAAAACTATTAAAATTTGGGACACTACCAATAAGCAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| CDS-3UTR TCA 90 bp | AATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGCGCATCTGCCCCGCCTaGTGTAAGCAGCTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRLVRGRGVEGLGYLQSVRICPA*CKQLSV Trigger: GACGGAGAGCTGCTTACATCAGGCGGGGCAGATGCG...CACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCGCATCTGCCCCGCCTaGTGTAAGCAGCTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYRICPA*CKQLSV Trigger: GACGGAGAGCTGCTTACATCAGGCGGGGCAGATGCG...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCGCATCTGCCCCGCCTaGTGTAAGCAGCTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FVAHPLKNRLVRGRGVEGRICPA*CKQLSV Trigger: GACGGAGAGCTGCTTACATCAGGCGGGGCAGATGCG...GCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR GCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACATAATGTGCTCCAGTaGGTCAGCCACCGCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLHNVLQ*VSHRQR Trigger: CCGCTGGCGGTGGCTGACGCACTGGAGCACATTATG...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTATGGTCAGAACCTGCTaGAGCGATGCATGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESVSAWQGCGRPRLPPECMVRTC*SDACAV Trigger: AACGGCACATGCATCGCTTCAGCAGGTTCTGACCAT...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGGCGAGAACTGCAGGCTaGTTACAACATCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQARTAG*LQHPCG Trigger: GCCACAAGGATGTTGTAACCAGCCTGCAGTTCTCGC...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| 3UTR CAA 72 bp | ATGGCATCTGCCCCTGCTACACAGCCGTGCCGGCCTTaGTTCTGTGTGCCCAGAGCCAGCTGCCTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: MASAPATQPCRP*FCVPRASCLEF Trigger: AAATTCAAGGCAGCTGGCTCTGGGCACACAGAACAAAGGCCGGCACGGCTGTGTAGCAGGGGCAGATGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYGPVCP*SVYMSL Trigger: AAGACTCATATACACACTTCAAGGACATACGGGGCC...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGTCAGAACCTGCTGAAGCGATGCATGTGCCGTTGGGGTTAAAATCCACACAGCACCAGGTAGGCTaGGGCAGGACGAGCGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AWSEPAEAMHVPLGLKSTQHQVG*GRTSVN Trigger: ATTCACGCTCGTCCTGCCTCAGCCTACCTGGTGCTG...TGTGGATTTTAACCCCAACGGCACATGCATCGCTTCAGCAGGTTCTGACCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCGCGAGAACTGCAGGCTaGTTACAACATCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVAHPLKNRLVRGRGVEGARTAG*LQHPCG Trigger: GCCACAAGGATGTTGTAACCAGCCTGCAGTTCTCGC...GCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGGTGATGGCAGCTTTGTaGCCTTTAAAAGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQVMAAL*PLKERS Trigger: GGAACGTTCTTTTAAAGGTCACAAAGCTGCCATCAC...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCGACTGACCTGACCTCGCTCACGGCCCTCCCTGCTCAGCTCTTCTGTTGGAAATCCTACAGAGTCTaGGAAGTTATTAACGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LATDLTSLTALPAQLFCWKSYRV*EVINAL Trigger: CAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTT...CCAACAGAAGAGCTGAGCAGGGAGGGCCGTGAGCGAGGTCAGGTCAGTCGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | AATCACAAGCAGCTGATTCTTGCTGTGGCAATACTGAGGGAGGGAGCATGGTTTCGCATCTGCCCCGCCTaGTGTAAGCAGCTCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHKQLILAVAILREGAWFRICPA*CKQLSV Trigger: GACGGAGAGCTGCTTACATCAGGCGGGGCAGATGCG...AAACCATGCTCCCTCCCTCAGTATTGCCACAGCAAGAATCAGCTGCTTGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACTCTGTTGGACAGCGCTaGAAAGCTTTTGCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYSVGQR*KAFADS Trigger: AGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGA...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGCATAATGTGCTCCAGTaGGTCAGCCACCGCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIFLYTDGICPCYTAVHNVLQ*VSHRQR Trigger: CCGCTGGCGGTGGCTGACGCACTGGAGCACATTATG...CACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGGTCAAAGACAGTCGCTaGTCCAGAATTGAAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EESVSAWQGCGRPRLPPEVKDSR*SRIETV Trigger: GACTGTTTCAATTCTGGAGCAGCGACTGTCTTTGAC...CTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGCTGTTACCCAAAGGATaGAAGGACAGACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQLLPKG*KDRQFT Trigger: TGTGAACTGTCTGTCCTTCCATCCTTTGGGTAACAG...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CCA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTGTTACCCAAAGGATaGAAGGACAGACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYLLPKG*KDRQFT Trigger: TGTGAACTGTCTGTCCTTCCATCCTTTGGGTAACAG...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAGTGATGGCAGCTTTGTaGCCTTTAAAAGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLVMAAL*PLKERS Trigger: GGAACGTTCTTTTAAAGGTCACAAAGCTGCCATCAC...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATTACCTTCAGGAACTGCCTGGGCATGGTCATTCTGCGATGGTGCAACAACATAATGTGCTCCAGTaGGTCAGCCACCGCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IHYLQELPGHGHSAMVQQHNVLQ*VSHRQR Trigger: CCGCTGGCGGTGGCTGACGCACTGGAGCACATTATG...TTGTTGCACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR GCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAGTCAAAGACAGTCGCTaGTCCAGAATTGAAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLVKDSR*SRIETV Trigger: GACTGTTTCAATTCTGGAGCAGCGACTGTCTTTGAC...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTAAATCCTACAGAGTCTaGGAAGTTATTAACGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESVSAWQGCGRPRLPPECKSYRV*EVINAL Trigger: CAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTT...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TTTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRCSPSEESVSAWQGCGRGPVCP*SVYMSL Trigger: AAGACTCATATACACACTTCAAGGACATACGGGGCC...CCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCTCTGTTGGACAGCGCTaGAAAGCTTTTGCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVAHPLKNRLVRGRGVEGSVGQR*KAFADS Trigger: AGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGA...GCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAGTGTGCTTTAAATTCTaGAGACTTCCCTTTCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLVCFKF*RLPFPI Trigger: GATAGGAAAGGGAAGTCTTCAGAATTTAAAGCACAC...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAAAATCCTACAGAGTCTaGGAAGTTATTAACGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLKSYRV*EVINAL Trigger: CAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTT...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGCGTCCACACTCCGAACTaGGGCTGTGTGTGCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPFFCTQMASAPATQPCVHTPN*GCVCFK Trigger: TTTAAAGCACACACAGCCCCAGTTCGGAGTGTGGAC...GCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAAGCGAATGGTTTCCCCTCAAGGCTGTGCTCACCTAAGAAACACATTCATGGTCAGAACCTGCTaGAGCGATGCATGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESKRMVSPQGCAHLRNTFMVRTC*SDACAV Trigger: AACGGCACATGCATCGCTTCAGCAGGTTCTGACCAT...GAATGTGTTTCTTAGGTGAGCACAGCCTTGAGGGGAAACCATTCGCTTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | AAACACATTCATTACCTTCAGGAACTGCCTGGGCATGGTCATTCTGCGATGGTGATGGTCAGAACCTGCTaGAGCGATGCATGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHIHYLQELPGHGHSAMVMVRTC*SDACAV Trigger: AACGGCACATGCATCGCTTCAGCAGGTTCTGACCAT...CACCATCGCAGAATGACCATGCCCAGGCAGTTCCTGAAGGTAATGAATGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCACCTGTAACACCAGAGATGCGCACGTCCCATGCAGTTCCCACCAGACAATCTGTTGGACAGCGCTaGAAAGCTTTTGCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSPVTPEMRTSHAVPTRQSVGQR*KAFADS Trigger: AGAATCAGCAAAAGCTTTTCAGCGCTGTCCAACAGA...TTGTCTGGTGGGAACTGCATGGGACGTGCGCATCTCTGGTGTTACAGGTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTTAGGATGTTGAGTTGTTCCATAATGTGCTCCAGTGCGTCAGCCACCGCCCTGTTACCCAAAGGATaGAAGGACAGACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WVRMLSCSIMCSSASATALLPKG*KDRQFT Trigger: TGTGAACTGTCTGTCCTTCCATCCTTTGGGTAACAG...GGCGGTGGCTGACGCACTGGAGCACATTATGGAACAACTCAACATCCTAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| CDS-3UTR TCA 90 bp | TCACAAGCAGCTGATTCTTGCTGTGGCAATACTGAGGGAGGGAGCATGGTTTCAGGCCCCGTATGTCCTTaGAGTGTGTATATGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQAADSCCGNTEGGSMVSGPVCP*SVYMSL Trigger: AAGACTCATATACACACTTCAAGGACATACGGGGCC...TGAAACCATGCTCCCTCCCTCAGTATTGCCACAGCAAGAATCAGCTGCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | CACACCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACAGCGAGAACTGCAGGCTaGTTACAACATCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTIVSPFFCTQMASAPATARTAG*LQHPCG Trigger: GCCACAAGGATGTTGTAACCAGCCTGCAGTTCTCGC...TGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCCCTCTATGAGATCCAGCATCTTAACTGTTCCATCAGAAGAGGCGGTGGTCCACACTCCGAACTaGGGCTGTGTGTGCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSMRSSILTVPSEEAVVHTPN*GCVCFK Trigger: TTTAAAGCACACACAGCCCCAGTTCGGAGTGTGGAC...CACCGCCTCTTCTGATGGAACAGTTAAGATGCTGGATCTCATAGAGGGAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
||
| CDS-3UTR CCA 90 bp | TCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTAATCACTTACATCTTCTaGTCTCTTTTTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSEESVSAWQGCGRPRLITYIF*SLFHSC Trigger: ACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGAT...TAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| 3UTR CAA 72 bp | GAGAAAAGCAGCTCAGAGGCACAAAACCGAAACCGCTaGGAGAACAACCTCTCCATTCCCACACCATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKSSSEAQNRNR*ENNLSIPTPLF Trigger: AAACAATGGTGTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGTGCCTCTGAGCTGCTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCACCTGTAACACCAGAGATGCGCACGTCCCATGCAGTTCCCACCAGACAAAAATCCTACAGAGTCTaGGAAGTTATTAACGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CSPVTPEMRTSHAVPTRQKSYRV*EVINAL Trigger: CAGTGCGTTAATAACTTCTCAGACTCTGTAGGATTT...TTGTCTGGTGGGAACTGCATGGGACGTGCGCATCTCTGGTGTTACAGGTGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCATCACTTACATCTTCTaGTCTCTTTTTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVAHPLKNRLVRGRGVEGITYIF*SLFHSC Trigger: ACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGAT...GCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | CACACCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACAGTGATGGCAGCTTTGTaGCCTTTAAAAGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTIVSPFFCTQMASAPATVMAAL*PLKERS Trigger: GGAACGTTCTTTTAAAGGTCACAAAGCTGCCATCAC...TGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020113.15 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACACCATTGTTTCTCTGTTACCCAAAGGATaGAAGGACAGACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TKPKPLGEQPLHSHTIVSLLPKG*KDRQFT Trigger: TGTGAACTGTCTGTCCTTCCATCCTTTGGGTAACAG...AGAAACAATGGTGTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGAGGCACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACATCACTTACATCTTCTaGTCTCTTTTTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRGTKPKPLGEQPLHSHITYIF*SLFHSC Trigger: ACAACTGTGAAAAAGAGACCAGAAGATGTAAGTGAT...GTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGTGCCTCTGAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGCGAATGGTTTCCCCTCAAGGCTGTGCTCACCTAAGAAACACATTCATGTGTGCTTTAAATTCTaGAGACTTCCCTTTCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KQANGFPSRLCSPKKHIHVCFKF*RLPFPI Trigger: GATAGGAAAGGGAAGTCTTCAGAATTTAAAGCACAC...ATGAATGTGTTTCTTAGGTGAGCACAGCCTTGAGGGGAAACCATTCGCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | AATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGGCAATTTGTTTGCAGTaGGGGCTGAAGTCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NRLVRGRGVEGLGYLQSVAICLQ*GLKSAE Trigger: CTCCGCTGACTTCAGCCCCAACTGCAAACAAATTGC...CACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
||
| CDS-3UTR CAA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGGGCCCCGTATGTCCTaGAAGTGTGTATATGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESVSAWQGCGRPRLPPECGPRMS*KCVYES Trigger: AGACTCATATACACACTTCAAGGACATACGGGGCCC...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CAA 90 bp | AATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGGTCGCTGCTCCAGAATaGAAACAGTCTGGGTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NRLVRGRGVEGLGYLQSVVAAPE*KQSGLG Trigger: TCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGAC...CACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGGGCCCCGTATGTCCTaGAAGTGTGTATATGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNRLVRGRGVEGLGYLQSGPRMS*KCVYES Trigger: AGACTCATATACACACTTCAAGGACATACGGGGCCC...ACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CAA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACAGCGCTGAAAAGCTTTaGCTGATTCTCAAGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYSAEKL*LILKAV Trigger: GACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCT...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
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| CDS TCA 90 bp | CAGCGTGATCTGAAACTGGCAAGGAGAGATTCCAGCTGTGCACGATaGCCCATCCTTACAATCTCAGCACCAGGTAGGCTGAGGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QRDLKLARRDSSCAR*PILTISAPGRLRQD Trigger: GTCCTGCCTCAGCCTACCTGGTGCTGAGATTGTAAGGATGGGTCATCGTGCACAGCTGGAATCTCTCCTTGCCAGTTTCAGATCACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGGTCTGGGTTAGGATGTaGAGTTGTTCCATAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKNRLVRGRGVEGLGYLQVWVRM*SCSIMC Trigger: GCACATTATGGAACAACTCAACATCCTAACCCAGAC...CTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
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| CDS-3UTR CAA 90 bp | AAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTAGCGCTGAAAAGCTTTaGCTGATTCTCAAGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNRLVRGRGVEGLGYLQSSAEKL*LILKAV Trigger: GACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCT...ACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
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| CDS TCA 90 bp | TGTTTGCAGTTGGGGCTGAAGTCAGCGGAGGTGATGGCAGCTTTGTaGCCTTTAAAAGAACGTTCCAGAATCGGATCCTCCAGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLQLGLKSAEVMAAL*PLKERSRIGSSRPE Trigger: CTCCGGCCTGGAGGATCCGATTCTGGAACGTTCTTTTAAAGGTCACAAAGCTGCCATCACCTCCGCTGACTTCAGCCCCAACTGCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
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| CDS-3UTR CAA 90 bp | CACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACGTCTCTTTTTCACAGTaGTGGATGAACATTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPLKNRLVRGRGVEGLGYVSFSQ*WMNILA Trigger: TGCCAGAATGTTCATCCACAACTGTGAAAAAGAGAC...GTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
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| CDS-3UTR CAA 90 bp | GAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGCCTCGGCTACCTCCAGAGTGTGTCTCTTTTTCACAGTaGTGGATGAACATTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESVSAWQGCGRPRLPPECVSFSQ*WMNILA Trigger: TGCCAGAATGTTCATCCACAACTGTGAAAAAGAGAC...ACACTCTGGAGGTAGCCGAGGCCTTCCACACCCCTGCCACGCACTAACCGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | TTTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGGCAGTAGCAATTTGTTaGCAGTTGGGGCTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRCSPSEESVSAWQGCGRAVAIC*QLGLKS Trigger: TGACTTCAGCCCCAACTGCAAACAAATTGCTACTGC...CCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
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| CDS TCA 90 bp | ATCCGTCATTTCAATAGTCTCCTTTCTGTCTTCATGGGAATGCGGTaGCCGTGGGTAGATGTCAAGAAGGTGTGGGGAGGCCTCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRHFNSLLSVFMGMR*PWVDVKKVWGGLKV Trigger: CACTTTGAGGCCTCCCCACACCTTCTTGACATCTACCCACGGTCACCGCATTCCCATGAAGACAGAAAGGAGACTATTGAAATGACGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159228.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGGGGCCCCGTATGTCCTaGAAGTGTGTATATGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFSIFLYTDGICPCYTAVGPRMS*KCVYES Trigger: AGACTCATATACACACTTCAAGGACATACGGGGCCC...CACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACACCATTGTTTCTGCAATTTGTTTGCAGTaGGGGCTGAAGTCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TKPKPLGEQPLHSHTIVSAICLQ*GLKSAE Trigger: CTCCGCTGACTTCAGCCCCAACTGCAAACAAATTGC...AGAAACAATGGTGTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020113.15 |
||
| CDS-3UTR CAA 90 bp | AACAAAGGGTTCAAGAAATACCTACAGATGTCTTCACCCTTGCCTGGCACAGCTGCAATTTGTTTGCAGTaGGGGCTGAAGTCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKGFKKYLQMSSPLPGTAAICLQ*GLKSAE Trigger: CTCCGCTGACTTCAGCCCCAACTGCAAACAAATTGC...AGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAACCCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAGAAGAGAAAAGCAGCTCAGAGGCACAAAACCGAAACCGCTTGGAGAGCAGTAGCAATTTGTTaGCAGTTGGGGCTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRQKRKAAQRHKTETAWRAVAIC*QLGLKS Trigger: TGACTTCAGCCCCAACTGCAAACAAATTGCTACTGC...TCTCCAAGCGGTTTCGGTTTTGTGCCTCTGAGCTGCTTTTCTCTTCTGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020113.15 |
||
| CDS-3UTR CAA 90 bp | CCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCGGGCCCCGTATGTCCTaGAAGTGTGTATATGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLFLHFSVHRWHLPLLHSGPRMS*KCVYES Trigger: AGACTCATATACACACTTCAAGGACATACGGGGCCC...GCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | TTTCGTTGCTCACCCTCTGAAGAATCGGTTAGTGCGTGGCAGGGGTGTGGAAGGAATCCGTCATTGTGGTaGAATCGAAAGAAAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: FRCSPSEESVSAWQGCGRNPSLW*NRKKGH Trigger: ATGTCCTTTCTTTCGATTCAACCACAATGACGGATT...CCTTCCACACCCCTGCCACGCACTAACCGATTCTTCAGAGGGTGAGCAACGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGCGTCTGGGTTAGGATGTaGAGTTGTTCCATAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPFFCTQMASAPATQPCVWVRM*SCSIMC Trigger: GCACATTATGGAACAACTCAACATCCTAACCCAGAC...GCACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACACAGCCGTGAGCGCTGAAAAGCTTTaGCTGATTCTCAAGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CFSIFLYTDGICPCYTAVSAEKL*LILKAV Trigger: GACTGCCTTGAGAATCAGCAAAAGCTTTTCAGCGCT...CACGGCTGTGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS TCA 90 bp | GAAAATATCTTCAATAGTCTCCTTTCTGTCTTCATGGGAATGCGGTaGCCGTGGGTAGATGTCAAGAAGGTGTGGGGAGGCCTCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ENIFNSLLSVFMGMR*PWVDVKKVWGGLKV Trigger: CACTTTGAGGCCTCCCCACACCTTCTTGACATCTACCCACGGTCACCGCATTCCCATGAAGACAGAAAGGAGACTATTGAAGATATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219884.2 |
||
| CDS GCA 90 bp | GCGCTGACGGAACATACTCCACACTTTAATGGATTTATCTTCAGATaGTGTAACCAAAAGCTGGCCATCAGCGGAAAAGTCCACACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALTEHTPHFNGFIFR*CNQKLAISGKVHTP Trigger: CGGAGTGTGGACTTTTCCGCTGATGGCCAGCTTTTGGTTACAGCATCTGAAGATAAATCCATTAAAGTGTGGAGTATGTTCCGTCAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020113.15 ENSMUST00000159043.2 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
||
| CDS-3UTR CAA 90 bp | TCACAAGCAGCTGATTCTTGCTGTGGCAATACTGAGGGAGGGAGCATGGTTTCAGTCTGGGTTAGGATGTaGAGTTGTTCCATAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQAADSCCGNTEGGSMVSVWVRM*SCSIMC Trigger: GCACATTATGGAACAACTCAACATCCTAACCCAGAC...TGAAACCATGCTCCCTCCCTCAGTATTGCCACAGCAAGAATCAGCTGCTTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAACCGAAACCGCTTGGAGAACAACCTCTCCATTCCCACACCATTGTTTCTGTCGCTGCTCCAGAATaGAAACAGTCTGGGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TKPKPLGEQPLHSHTIVSVAAPE*KQSGLG Trigger: TCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGAC...AGAAACAATGGTGTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| CDS-3UTR CAA 90 bp | CACACCATTGTTTCTCCATTTTTCTGTACACAGATGGCATCTGCCCCTGCTACAGTCGCTGCTCCAGAATaGAAACAGTCTGGGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: HTIVSPFFCTQMASAPATVAAPE*KQSGLG Trigger: TCCTAACCCAGACTGTTTCAATTCTGGAGCAGCGAC...TGTAGCAGGGGCAGATGCCATCTGTGTACAGAAAAATGGAGAAACAATGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| CDS TCA 90 bp | GGAAAAGTCCACACTCCGAACTGGGGCTGTGTGTGCTTTAAATTCTaGAGACTTCCCTTTCCTATCAAGAACCCACAGTCTAACAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GKVHTPNWGCVCFKF*RLPFPIKNPQSNSS Trigger: AGAACTGTTAGACTGTGGGTTCTTGATAGGAAAGGGAAGTCTTCAGAATTTAAAGCACACACAGCCCCAGTTCGGAGTGTGGACTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| CDS-3UTR CAA 90 bp | ACAACACACAGGAGACAGAAGAGAAAAGCAGCTCAGAGGCACAAAACCGAAACCAATCCGTCATTGTGGTaGAATCGAAAGAAAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: TTHRRQKRKAAQRHKTETNPSLW*NRKKGH Trigger: ATGTCCTTTCTTTCGATTCAACCACAATGACGGATT...GGTTTCGGTTTTGTGCCTCTGAGCTGCTTTTCTCTTCTGTCTCCTGTGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| CDS-3UTR CAA 90 bp | AGCATGGTTTCAAGGCAGACTCTTTTTGACCTGAAAGAACTACGAGCCAGCTCAGTCTCTTTTTCACAGTaGTGGATGAACATTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SMVSRQTLFDLKELRASSVSFSQ*WMNILA Trigger: TGCCAGAATGTTCATCCACAACTGTGAAAAAGAGAC...TGAGCTGGCTCGTAGTTCTTTCAGGTCAAAAAGAGTCTGCCTTGAAACCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020113.15 ENSMUST00000159990.2 |
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| CDS CAA 72 bp | AGGCTGAGGCAGGACGAGCGTGAATTTAAGGCCAATTaGGCGCAGCGTACCCAGTGTGTGTGTCGATACAGG | + |
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Preference number: 6 (lower is better) Translates to: RLRQDEREFKAN*AQRTQCVCRYR Trigger: CCTGTATCGACACACACACTGGGTACGCTGCGCCAAATTGGCCTTAAATTCACGCTCGTCCTGCCTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| CDS TCA 72 bp | CTGAAACTGGCAAGGAGAGATTCCAGCTGTGCACGATaGCCCATCCTTACAATCTCAGCACCAGGTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKLARRDSSCAR*PILTISAPGRL Trigger: CAGCCTACCTGGTGCTGAGATTGTAAGGATGGGTCATCGTGCACAGCTGGAATCTCTCCTTGCCAGTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159043.2 |
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| CDS CAA 72 bp | AAGGTGTCCCACGAAGCAGTAGCAATTTGTTTGCAGTaGGGGCTGAAGTCAGCGGAGGTGATGGCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KVSHEAVAICLQ*GLKSAEVMAAL Trigger: CAAAGCTGCCATCACCTCCGCTGACTTCAGCCCCAACTGCAAACAAATTGCTACTGCTTCGTGGGACACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
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| CDS TCA 72 bp | TTGGGGCTGAAGTCAGCGGAGGTGATGGCAGCTTTGTaGCCTTTAAAAGAACGTTCCAGAATCGGATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGLKSAEVMAAL*PLKERSRIGSS Trigger: GGAGGATCCGATTCTGGAACGTTCTTTTAAAGGTCACAAAGCTGCCATCACCTCCGCTGACTTCAGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000219884.2 |
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| CDS CCA 72 bp | TACATGACACGATCAACCTTCCGTCAGGTGAAAATTTaGCGCAGCGTACCCAGTGTGTGTGTCGATACAGGG | + |
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Preference number: 6 (lower is better) Translates to: YMTRSTFRQVKI*RSVPSVCVDTG Trigger: CCCTGTATCGACACACACACTGGGTACGCTGCGCCAAATTTTCACCTGACGGAAGGTTGATCGTGTCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| CDS CCA 72 bp | AGGCTAATAGGTTTCCTTGTGGCGAGAACTGCAGGCTaGTTACAACATCCTTGTGGCCCACGTATCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RLIGFLVARTAG*LQHPCGPRICK Trigger: CTTACAGATACGTGGGCCACAAGGATGTTGTAACCAGCCTGCAGTTCTCGCCACAAGGAAACCTATTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| CDS TCA 72 bp | CACACTCCGAACTGGGGCTGTGTGTGCTTTAAATTCTaGAGACTTCCCTTTCCTATCAAGAACCCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: HTPNWGCVCFKF*RLPFPIKNPQS Trigger: AGACTGTGGGTTCTTGATAGGAAAGGGAAGTCTTCAGAATTTAAAGCACACACAGCCCCAGTTCGGAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020113.15 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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| CDS GCA 72 bp | AAGGGTTCAAGAAATACCTACAGATGTCTTCACCCTTaGCTGGCACAGCTCGATAGGTGGAATCCGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: KGSRNTYRCLHP*LAQLDRWNPSF Trigger: AAATGACGGATTCCACCTATCGAGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159228.8 |
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| CDS CCA 72 bp | GTTCAAGAAATACCTACAGATGTCTTCACCCTTGCCTaGCACAGCTCGATAGGTGGAATCCGTCATTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: VQEIPTDVFTLA*HSSIGGIRHFN Trigger: ATTGAAATGACGGATTCCACCTATCGAGCTGTGCCAGGCAAGGGTGAAGACATCTGTAGGTATTTCTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159228.8 |
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| CDS GCA 72 bp | GAACATACTCCACACTTTAATGGATTTATCTTCAGATaGTGTAACCAAAAGCTGGCCATCAGCGGAAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: EHTPHFNGFIFR*CNQKLAISGKV Trigger: GACTTTTCCGCTGATGGCCAGCTTTTGGTTACAGCATCTGAAGATAAATCCATTAAAGTGTGGAGTATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020113.15 ENSMUST00000159043.2 ENSMUST00000159228.8 ENSMUST00000159990.2 ENSMUST00000219884.2 |
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