Pregenerated sensors for PNPLA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036257Ensembl transcript IDs: ENSMUST00000043082.16, ENSMUST00000122902.8, ENSMUST00000125757.2, ENSMUST00000143771.2, ENSMUST00000156082.3, ENSMUST00000218803.2, ENSMUST00000218954.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTGACCTCAGTGGGAAAGGAAGCACCTAGCATCGAAGAGATTTaGAGTGTCAGGGTTGGGGGAATACCCAGGAGGGCCCCCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: CLTSVGKEAPSIEEI*SVRVGGIPRRAPTS Trigger: GCTGGTGGGGGCCCTCCTGGGTATTCCCCCAACCCTGACACTTCAAATCTCTTCGATGCTAGGTGCTTCCTTTCCCACTGAGGTCAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | AGGCATGAGGCTTGGCAGCAAGCGGTTTTACCTGTTGAGTTTTACTaGAGGACTTTGTCCTCTGTAGCCCAGGCTGGCCCAGAACTCACT | + |
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Preference number: 1 (lower is better) Translates to: RHEAWQQAVLPVEFY*RTLSSVAQAGPELT Trigger: AGTGAGTTCTGGGCCAGCCTGGGCTACAGAGGACAAAGTCCTGCAGTAAAACTCAACAGGTAAAACCGCTTGCTGCCAAGCCTCATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CCA 90 bp | GCAATGCTGGTGAACTGGGTAGGGAAGCTCAGGCATTCTCTCCTTTaGCCCCCTCTCCATGGATTTCTGAGTCCCTTTAGAGGTGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: AMLVNWVGKLRHSLL*PPLHGFLSPFRGVN Trigger: GTTCACACCTCTAAAGGGACTCAGAAATCCATGGAGAGGGGGCCAAAGGAGAGAATGCCTGAGCTTCCCTACCCAGTTCACCAGCATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGTTTCTaGCTCCCAAGTACTAGGATTAAAGGCGTGCACCACCACTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSTCF*LPSTRIKGVHHHCL Trigger: CAAGCAGTGGTGGTGCACGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CCA 90 bp | TGGACCAACACATGCAAACAGTCTAGCCCAAGAGCATCTGTAGTCTaGAAACTCTTTGTTGGTGTGTGGATAGCTCCTGCCAGGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: WTNTCKQSSPRASVV*KLFVGVWIAPARNR Trigger: TCTGTTCCTGGCAGGAGCTATCCACACACCAACAAAGAGTTTCCAGACTACAGATGCTCTTGGGCTAGACTGTTTGCATGTGTTGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | AAGGCATCCACTCCTCGCCCCATCTTCCAAACATTCCTTATTACTTaGAAAGCAGTGGACAGGTCTTCAACTGGGAGGCCACTGATTTTG | + |
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Preference number: 1 (lower is better) Translates to: KASTPRPIFQTFLIT*KAVDRSSTGRPLIL Trigger: CAAAATCAGTGGCCTCCCAGTTGAAGACCTGTCCACTGCTTTTCAAGTAATAAGGAATGTTTGGAAGATGGGGCGAGGAGTGGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CCA 90 bp | TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCAATaGAAAGAGAGGCCCACTGGTCTTGCAAACTTTATCTGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLAAYVSEDGLVGHQ*KERPTGLANFICLS Trigger: ACTGAGGCAGATAAAGTTTGCAAGACCAGTGGGCCTCTCTTTCCATTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | TACTTAGTTAGAAGGAAAGTTCATACGTGGCACCCAATATGTGGCTaGACAAAAACACTGTGGCCTGACCTGAGTACCCTTAGCAATGCC | + |
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Preference number: 1 (lower is better) Translates to: YLVRRKVHTWHPICG*TKTLWPDLSTLSNA Trigger: GGCATTGCTAAGGGTACTCAGGTCAGGCCACAGTGTTTTTGTTCAGCCACATATTGGGTGCCACGTATGAACTTTCCTTCTAACTAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | AGTAGCTTGTGCTTGAAATCTGCGCTCACAGAGAATCCCGGGCTGTaGAGATTACCATTAGCTTCTATTTTTCAGAAGTCAGTCTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SSLCLKSALTENPGL*RLPLASIFQKSVWL Trigger: TAGCCAGACTGACTTCTGAAAAATAGAAGCTAATGGTAATCTGCACAGCCCGGGATTCTCTGTGAGCGCAGATTTCAAGCACAAGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | CGGATACATAGGGCATGTTTAGATGTGTGTGGATTAATTGTATCCTaGTATCAGACACGGTCATCCACAACCACCAAAGTAACAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: RIHRACLDVCGLIVS*YQTRSSTTTKVTAP Trigger: AGGTGCTGTTACTTTGGTGGTTGTGGATGACCGTGTCTGATATCAGGATACAATTAATCCACACACATCTAAACATGCCCTATGTATCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | AGGCTGGTCACGGTGAAGAGCATTCCACTGAGGTTTCATGCTAAATaGATGAGGTTGAGAACAGGCTGTTATGAACAAGATGAACAACAA | + |
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Preference number: 1 (lower is better) Translates to: RLVTVKSIPLRFHAK*MRLRTGCYEQDEQQ Trigger: TTGTTGTTCATCTTGTTCATAACAGCCTGTTCTCAACCTCATTCATTTAGCATGAAACCTCAGTGGAATGCTCTTCACCGTGACCAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | TTATATATACCAGAATGGCCTAGAACTCAAGAGGTCTGTTTCCTTTaGCTCCTGAGTACTAGGATTAAAGGCATTTGCCATGCCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LYIPEWPRTQEVCFL*LLSTRIKGICHAWQ Trigger: TTGCCAGGCATGGCAAATGCCTTTAATCCTAGTACTCAGGAGGCAAAGGAAACAGACCTCTTGAGTTCTAGGCCATTCTGGTATATATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CCA 90 bp | ACAGGCTGTTATGAACAAGATGAACAACAAAATTCCTCAGCATTCTaGAGAGGCCAGGAGGGTTTGGGTCGTTTAACCAACTGTAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: TGCYEQDEQQNSSAF*RGQEGLGRLTNCKN Trigger: ATTCTTACAGTTGGTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGTTCATCTTGTTCATAACAGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | TGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGTGCACCACCACTaGTTGGCCAGTATTGAATTTTTGAAAGACTACTACAGATACATT | + |
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Preference number: 1 (lower is better) Translates to: CFCLPSTRIKGVHHH*LASIEFLKDYYRYI Trigger: AATGTATCTGTAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAGTGGTGGTGCACGCCTTTAATCCTAGTACTTGGGAGGCAGAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | TCCAGTGCCACACTATTAGTTTTGCCAAGTGTGGGAAGTCGCTTCTaGAGTTACTCTTTCTTCAGTGACTTAAATTACAGAGGTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SSATLLVLPSVGSRF*SYSFFSDLNYRGFP Trigger: AGGAAAACCTCTGTAATTTAAGTCACTGAAGAAAGAGTAACTGCAGAAGCGACTTCCCACACTTGGCAAAACTAATAGTGTGGCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR GCA 90 bp | GCTTCTATCTCCCCAGACATAGTACTCTATCACAGAACTCCAAAGTaGTTAAGCATTCTAAACTCAAATCTTCACCTTGACTCCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ASISPDIVLYHRTPK*LSILNSNLHLDSRL Trigger: AAGCCTGGAGTCAAGGTGAAGATTTGAGTTTAGAATGCTTAAGCACTTTGGAGTTCTGTGATAGAGTACTATGTCTGGGGAGATAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | TGGGCTCTATCTGGGTTCCTGTTGAAACTTAAGGTGAAAGGACAGTaGCAGGCCAGTAATCGTTTGATACTTTCTAGAAAAGGAAGATAT | + |
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Preference number: 1 (lower is better) Translates to: WALSGFLLKLKVKGQ*QASNRLILSRKGRY Trigger: ATATCTTCCTTTTCTAGAAAGTATCAAACGATTACTGGCCTGTCACTGTCCTTTCACCTTAAGTTTCAACAGGAACCCAGATAGAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | TGTCATGTTGAATCACACCGTTCCTCTCTAAACTGGTGGATCTTTTaGTGGCCTTCATTTATGAGAACACATGTGTACCCTACTCACAAT | + |
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Preference number: 1 (lower is better) Translates to: CHVESHRSSLNWWIF*WPSFMRTHVYPTHN Trigger: ATTGTGAGTAGGGTACACATGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGGTGTGATTCAACATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156082.3 |
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| 3UTR GCA 90 bp | GAGGTCTGTTTCCTTTGCCTCCTGAGTACTAGGATTAAAGGCATTTaGCATGCCTGGCAAAGATTCTCATTCATTCATTCATTCATTCAT | + |
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Preference number: 1 (lower is better) Translates to: EVCFLCLLSTRIKGI*HAWQRFSFIHSFIH Trigger: ATGAATGAATGAATGAATGAATGAGAATCTTTGCCAGGCATGGCAAATGCCTTTAATCCTAGTACTCAGGAGGCAAAGGAAACAGACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | GCTCAACCATTCCCTGCTATGATTAGAACTATTTCTAGCACACAGTaGGTTAGGACAAATTTTGGATCTCAAATTTTAAGGGTCCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: AQPFPAMIRTISSTQ*VRTNFGSQILRVRA Trigger: AGCTCGGACCCTTAAAATTTGAGATCCAAAATTTGTCCTAACTCACTGTGTGCTAGAAATAGTTCTAATCATAGCAGGGAATGGTTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | TTTGCCTGTGTTTTGATTACAGGCGTGCTCAACCATTCCCTGCTATaGTTAGAACTATTTCTAGCACACAGTGAGTTAGGACAAATTTTG | + |
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Preference number: 1 (lower is better) Translates to: FACVLITGVLNHSLL*LELFLAHSELGQIL Trigger: CAAAATTTGTCCTAACTCACTGTGTGCTAGAAATAGTTCTAATCATAGCAGGGAATGGTTGAGCACGCCTGTAATCAAAACACAGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR TCA 90 bp | GTGGGCGCACCTAGTGAAATGCTAAGTAGTGTAAATGGAAAGACATaGAAGAAAATCAAGTCACACAAATTCCACATGATTGAAACGAGT | + |
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Preference number: 1 (lower is better) Translates to: VGAPSEMLSSVNGKT*KKIKSHKFHMIETS Trigger: ACTCGTTTCAATCATGTGGAATTTGTGTGACTTGATTTTCTTTCATGTCTTTCCATTTACACTACTTAGCATTTCACTAGGTGCGCCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
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| 3UTR TCA 90 bp | CAGACACATTTGTTCCTTCACTGCCTTAATAGCCAACAAGTTTACTaGATATCTCTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: QTHLFLHCLNSQQVY*ISLVCQILSRRYSN Trigger: ATTGCTGTATCTCCTACTTAGAATTTGACACACAAGAGATATTCAGTAAACTTGTTGGCTATTAAGGCAGTGAAGGAACAAATGTGTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CCA 90 bp | AAAGAAGAGTTTATTTTAGCTCATAATTTGAATGCATTTTTATCATaGTACAGGATGGCACTAAGAGAGATGCATGAAGCAGCTAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: KEEFILAHNLNAFLS*YRMALREMHEAASH Trigger: GTGACTAGCTGCTTCATGCATCTCTCTTAGTGCCATCCTGTACCATGATAAAAATGCATTCAAATTATGAGCTAAAATAAACTCTTCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CAA 90 bp | GACCTAGCTATCCATCCTAGAACTCACTCTGTAGCACAGGCTAGCTaGGAATTCAGCGATCCACCCACCTCTGCCTCCCCAGTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DLAIHPRTHSVAQAS*EFSDPPTSASPVLG Trigger: TCCCAGCACTGGGGAGGCAGAGGTGGGTGGATCGCTGAATTCCAAGCTAGCCTGTGCTACAGAGTGAGTTCTAGGATGGATAGCTAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGGTCATGCACAGGGGCTaGCTATTCAGCCGACTACCT | + |
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Preference number: 2 (lower is better) Translates to: LELRNLPVSASQVLGLKAVMHRG*LFSRLP Trigger: AGGTAGTCGGCTGAATAGTCAGCCCCTGTGCATGAC...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR GCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACGACAGGATTTCTCTGTaGAGCCCTGGCTGTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNDRISL*SPGCTG Trigger: TCCAGTACAGCCAGGGCTGCACAGAGAAATCCTGTC...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTCCACTGTCTTCAAGGTCATGCACAGGGGCTGACTATTCAGCCGACTACAGTAAAAGCAAAGGCTaGAGTGTAACATCCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: SCPLSSRSCTGADYSADYSKSKG*SVTSPI Trigger: AATGGGGGATGTTACACTTCAGCCTTTGCTTTTACT...GTAGTCGGCTGAATAGTCAGCCCCTGTGCATGACCTTGAAGACAGTGGACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACAGGCATTCTCTCCTTTaGCCCCCTCTCCATGGATTT | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNRHSLL*PPLHGF Trigger: AAATCCATGGAGAGGGGGCCAAAGGAGAGAATGCCT...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR GCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACTGGTGGACCAACACATaGAAACAGTCTAGCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNWWTNT*KQSSPR Trigger: TCTTGGGCTAGACTGTTTGCATGTGTTGGTCCACCA...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CAA 90 bp | GCTCTACAGCACTCCAGGAAGTACATTCTAGTTAAAAGACAGTGTTaGCATGAGAGTGTGCAGTGGTGCCTGAGTCCTGGTACCTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ALQHSRKYILVKRQC*HESVQWCLSPGTLK Trigger: TTTCAAGGTACCAGGACTCAGGCACCACTGCACACTCTCATGCAAACACTGTCTTTTAACTAGAATGTACTTCCTGGAGTGCTGTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR GCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACTTCCTTCTGAAAGACTaGAATGCTGGTGAACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNFLLKD*NAGELG Trigger: ACCCAGTTCACCAGCATTGCAGTCTTTCAGAAGGAA...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACAGAGCATCTGTAGTCTaGAAACTCTTTGTTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNRASVV*KLFVGV Trigger: CACACCAACAAAGAGTTTCCAGACTACAGATGCTCT...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGGATGGCCTTCATTTATaGGAACACATGTGTACCCTA | + |
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Preference number: 2 (lower is better) Translates to: LELRNLPVSASQVLGLKADGLHL*EHMCTL Trigger: TAGGGTACACATGTGTTCTCATAAATGAAGGCCATC...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACTGGCCTAACGAGCCATaGAGAAGCAAATATAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNWPNEP*RSKYKF Trigger: AAACTTATATTTGCTTCTTCATGGCTCGTTAGGCCA...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACGACAAGAAACATGCTTaGAGAAGGCTTCTTAGAATG | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNDKKHA*RRLLRM Trigger: CATTCTAAGAAGCCTTCTTCAAGCATGTTTCTTGTC...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACGTGCTACCACAGTCATaGACTTTTTCTCAAATAACC | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNVLPQS*TFSQIT Trigger: GGTTATTTGAGAAAAAGTCCATGACTGTGGTAGCAC...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CAA 90 bp | CTGCAAGTTGATTTTGATACCACATCCAGTGCCACACTATTAGTTTaGCCAAGTGTGGGAAGTCGCTTCTGCAGTTACTCTTTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LQVDFDTTSSATLLV*PSVGSRFCSYSFFS Trigger: ACTGAAGAAAGAGTAACTGCAGAAGCGACTTCCCACACTTGGCAAAACTAATAGTGTGGCACTGGATGTGGTATCAAAATCAACTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGGTCAAAGGCTTCCTATaGTGTCTAATTTCTCATGGA | + |
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Preference number: 2 (lower is better) Translates to: LELRNLPVSASQVLGLKAVKGFL*CLISHG Trigger: TCCATGAGAAATTAGACATCATAGGAAGCCTTTGAC...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACATGAAGAGAAGCAAATaGATTAAGGATCTAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: TTKFLSILERPGGFGSFNMKRSK*IKDLEP Trigger: GGGTTCTAGATCCTTAATTCATTTGCTTCTCTTCAT...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR CAA 90 bp | GGTAGGATCTGTCTGTCTAGTCCTGAACTGAATGTCTCTGGGATCTaGATAGGGTTTGTGTTACATCTGCAAGTTGATTTTGATACCACA | + |
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Preference number: 2 (lower is better) Translates to: GRICLSSPELNVSGI*IGFVLHLQVDFDTT Trigger: TGTGGTATCAAAATCAACTTGCAGATGTAACACAAACCCTATCAAGATCCCAGAGACATTCAGTTCAGGACTAGACAGACAGATCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR TCA 90 bp | CCGTTCCTCTCTAAACTGGTGGATCTTTTGATGGCCTTCATTTATGAGAACACAGATGGCCTTCATTTATaGGAACACATGTGTACCCTA | + |
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Preference number: 2 (lower is better) Translates to: PFLSKLVDLLMAFIYENTDGLHL*EHMCTL Trigger: TAGGGTACACATGTGTTCTCATAAATGAAGGCCATC...TGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGACCAGGCTCAGAAAGGTaGACACCACATTCTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRPGSER*TPHSLS Trigger: TGAGAGAGAATGTGGTGTTCACCTTTCTGAGCCTGG...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGAGCTGAATCTTACAAGCTGTCCACTGTCTTCAAGGTCATGCACAGGGTACAGTGAATACTTATaGCACCATGTTCAACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: ESELNLTSCPLSSRSCTGYSEYL*HHVQLL Trigger: CAAAAGTTGAACATGGTGCCATAAGTATTCACTGTA...CCCTGTGCATGACCTTGAAGACAGTGGACAGCTTGTAAGATTCAGCTCTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAAGGCATTCAATGAGATaGTATGCTATGCCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSRHSMR*YAMPAP Trigger: GGGGGCAGGCATAGCATAGCATCTCATTGAATGCCT...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAGCATTCAGGCTTTTGTaGCCTGTTACCAGTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRAFRLL*PVTSQR Trigger: CCTTTGACTGGTAACAGGCCACAAAAGCCTGAATGC...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGATTCATGCATATTTGTaGGGTGTGATGAATCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LELRNLPVSASQVLGLKAIHAYL*GVMNLK Trigger: TTTCAGATTCATCACACCCCACAAATATGCATGAAT...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCATGGATCCTCTCAGAATaGATTCAGGCTTTTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSWILSE*IQAFVA Trigger: GGCCACAAAAGCCTGAATGCATTCTGAGAGGATCCA...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAACACACCATCACACCTaGCTCTGTGTATTTTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRTHHHT*LCVFFH Trigger: GTGGAAAAATACACAGAGCCAGGTGTGATGGTGTGT...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGATGGCCTTCATTTATaGGAACACATGTGTACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTDGLHL*EHMCTL Trigger: TAGGGTACACATGTGTTCTCATAAATGAAGGCCATC...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAGATGGCCTTCATTTATaGGAACACATGTGTACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKDGLHL*EHMCTL Trigger: TAGGGTACACATGTGTTCTCATAAATGAAGGCCATC...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR CAA 90 bp | ATTTCTGTATCTGGATTATTACTACAGAGAAGAGTTCAACATTTGTaGAATGGGGTTGCTGAGGAGGCTCAGAGCTTAAGAAACTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ISVSGLLLQRRVQHL*NGVAEEAQSLRNLF Trigger: AAACAAGTTTCTTAAGCTCTGAGCCTCCTCAGCAACCCCATTCAACAAATGTTGAACTCTTCTCTGTAGTAATAATCCAGATACAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAGCTTTCCTCCTTTTATaGATCAGAGCTGAATCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRAFLLL*IRAESY Trigger: GTAAGATTCAGCTCTGATTCATAAAAGGAGGAAAGC...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGACTATGTGTATTTATGTaGGAGAGCGTGTATGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRLCVFM*ESVYGR Trigger: TCTACCATACACGCTCTCTCACATAAATACACATAG...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAACATTCCTTATTACTTaGAAAGCAGTGGACAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSTFLIT*KAVDRS Trigger: AGACCTGTCCACTGCTTTTCAAGTAATAAGGAATGT...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAATCGTGAAGCTAAGCTaGACTTTATCAAAGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRIVKLS*TLSKAF Trigger: AAAAGCCTTTGATAAAGTTCAGCTTAGCTTCACGAT...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAACAGGCCATCAAGCATGATATaGACTTCTAAAGTGTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: MFSHITGLNLKYVSEGNRPSSMI*TSKVSE Trigger: TTCAGACACTTTAGAAGTTCATATCATGCTTGATGG...CCTGTTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156082.3 ENSMUST00000218803.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAGGGATGGGACCAACATaGAATTTTCCAAATGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSGMGPT*NFPNGL Trigger: TAATCCATTTGGAAAATTCCATGTTGGTCCCATCCC...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGATATTTATCAAAGTGGTaGACCAACACATGCAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRYLSKW*TNTCKQ Trigger: CTGTTTGCATGTGTTGGTCCACCACTTTGATAAATA...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAATTAGTTTTTATAGCTaGGCTGTCTTGTCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSISFYS*AVLSDL Trigger: GAGGTCAGACAAGACAGCCCAGCTATAAAAACTAAT...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCACTGCTTGGCCAGTATTaGATTTTTGAAAGACTACTA | + |
|
Preference number: 2 (lower is better) Translates to: GLMATGWEASLIRTKFSSLLGQY*IFERLL Trigger: TAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAG...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGATACAAATTTCATTTTTaGTTACCCAGGCTCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVCQILSRRYSNRDKKGRYKFHF*LPRLRK Trigger: CTTTCTGAGCCTGGGTAACCAAAAATGAAATTTGTA...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | TCAGTGGGAAAGGAAGCACCTAGCATCGAAGAGATTTaGAGTGTCAGGGTTGGGGGAATACCCAGGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVGKEAPSIEEI*SVRVGGIPRRA Trigger: GGCCCTCCTGGGTATTCCCCCAACCCTGACACTTCAAATCTCTTCGATGCTAGGTGCTTCCTTTCCCACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | GCTTGGCAGCAAGCGGTTTTACCTGTTGAGTTTTACTaGAGGACTTTGTCCTCTGTAGCCCAGGCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AWQQAVLPVEFY*RTLSSVAQAGP Trigger: TGGGCCAGCCTGGGCTACAGAGGACAAAGTCCTGCAGTAAAACTCAACAGGTAAAACCGCTTGCTGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AAGCTGTCCACTGTCTTCAAGGTCATGCACAGGGGCTaGCTATTCAGCCGACTACCTCCCACATTCTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: KLSTVFKVMHRG*LFSRLPPTFST Trigger: GGTTGAGAATGTGGGAGGTAGTCGGCTGAATAGTCAGCCCCTGTGCATGACCTTGAAGACAGTGGACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AACTCATCATCCTCCTTCAGTTCCCCAAGCTGCAGCTaGAGCCGGCTCTACAGCACTCCAGGAAGTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: NSSSSFSSPSCS*SRLYSTPGSTF Trigger: GAATGTACTTCCTGGAGTGCTGTAGAGCCGGCTTCAGCTGCAGCTTGGGGAACTGAAGGAGGATGATGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCAATGGAAAGAGAGGCCCACTaGTCTTGCAAACTTTATCTGCCTCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRPSMEREAH*SCKLYLPQYRG Trigger: TCCCCTGTACTGAGGCAGATAAAGTTTGCAAGACCAGTGGGCCTCTCTTTCCATTGATGGCCGACTAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGAGCTGCTCCCTCCTGTaGCCAAGGTTGGCAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LELRNLPVSASQVLGLKASCSLL*PRLAES Trigger: GGACTCTGCCAACCTTGGCAACAGGAGGGAGCAGCT...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | GAAAAAGCCAAGAGGCCAGAACACATGGAGCGGTGCTaGAGAGGCATAGGATACTTCCGAAAAGCTTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EKAKRPEHMERC*RGIGYFRKACG Trigger: GCCACAAGCTTTTCGGAAGTATCCTATGCCTCTTCAGCACCGCTCCATGTGTTCTGGCCTCTTGGCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | GGTCATTCTCTAGACAGGAAGTTCCTTCTGAAAGACTaGAATGCTGGTGAACTGGGTAGGGAAGCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GHSLDRKFLLKD*NAGELGREAQA Trigger: TGCCTGAGCTTCCCTACCCAGTTCACCAGCATTGCAGTCTTTCAGAAGGAACTTCCTGTCTAGAGAATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | GGAGTGGATGGGTGGGGGAGCTGGTGCGGGGACTTCTaGGATAGTACTGGAAATGTAAATGAAATAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: GVDGWGSWCGDF*DSTGNVNEINT Trigger: GGTATTTATTTCATTTACATTTCCAGTACTATCCCAGAAGTCCCCGCACCAGCTCCCCCACCCATCCACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | AGAGCTCCTTTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCGGCCATCAATGGAAAGAGAGGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RAPFSSCICIRR*PSRPSMEREAH Trigger: GTGGGCCTCTCTTTCCATTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGAAAGGAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | GCTCCTGATCATCCTGTTGCAGCTTTGCCTGTGTTTTaGTTACAGGCGTGCTCAACCATTCCCTGCTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: APDHPVAALPVF*LQACSTIPCYD Trigger: ATCATAGCAGGGAATGGTTGAGCACGCCTGTAATCAAAACACAGGCAAAGCTGCAACAGGATGATCAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | GTTTTACTGCAGGACTTTGTCCTCTGTAGCCCAGGCTaGCCCAGAACTCACTATGTAGTTGAGCTTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLQDFVLCSPG*PRTHYVVELNS Trigger: TGAGTTAAGCTCAACTACATAGTGAGTTCTGGGCCAGCCTGGGCTACAGAGGACAAAGTCCTGCAGTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | ACATGCAAACAGTCTAGCCCAAGAGCATCTGTAGTCTaGAAACTCTTTGTTGGTGTGTGGATAGCTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TCKQSSPRASVV*KLFVGVWIAPA Trigger: GGCAGGAGCTATCCACACACCAACAAAGAGTTTCCAGACTACAGATGCTCTTGGGCTAGACTGTTTGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGTTTTACTGCAGGACTTaGTCCTCTGTAGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LELRNLPVSASQVLGLKAFYCRT*SSVAQA Trigger: AGCCTGGGCTACAGAGGACAAAGTCCTGCAGTAAAA...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | CAATATGTGGCTGAACAAAAACACTGTGGCCTGACCTaGGTACCCTTAGCAATGCCTAGCAAAGCACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: QYVAEQKHCGLT*VPLAMPSKAQT Trigger: GGTTTGTGCTTTGCTAGGCATTGCTAAGGGTACTCAGGTCAGGCCACAGTGTTTTTGTTCAGCCACATATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AGAAGGAAAGTTCATACGTGGCACCCAATATGTGGCTaGACAAAAACACTGTGGCCTGACCTGAGTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RRKVHTWHPICG*TKTLWPDLSTL Trigger: AAGGGTACTCAGGTCAGGCCACAGTGTTTTTGTTCAGCCACATATTGGGTGCCACGTATGAACTTTCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | GGCTTTTGTGGCCTGTTACCAGTCAAAGGCTTCCTATaGTGTCTAATTTCTCATGGACCGAAAGGTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GFCGLLPVKGFL*CLISHGPKGTG Trigger: CCCAGTACCTTTCGGTCCATGAGAAATTAGACATCATAGGAAGCCTTTGACTGGTAACAGGCCACAAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | AGTCCTGGATCCTCTCAGAATGCATTCAGGCTTTTGTaGCCTGTTACCAGTCAAAGGCTTCCTATGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPGSSQNAFRLL*PVTSQRLPMMS Trigger: AGACATCATAGGAAGCCTTTGACTGGTAACAGGCCACAAAAGCCTGAATGCATTCTGAGAGGATCCAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | GCTTTTAAGAATCAACATTCTGCTGGTGTGTACACATaGAGCATGTCTGCAAAGGTGGGCACTGAACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFKNQHSAGVYT*SMSAKVGTELG Trigger: CCCAAGTTCAGTGCCCACCTTTGCAGACATGCTCCATGTGTACACACCAGCAGAATGTTGATTCTTAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AGAGTAGTTATGGATCCCAGGCTAGTGTTGAGCTCCTaGTCATCCTGTTGCAGCTTTGCCTGTGTTTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: RVVMDPRLVLSS*SSCCSFACVLI Trigger: AATCAAAACACAGGCAAAGCTGCAACAGGATGATCAGGAGCTCAACACTAGCCTGGGATCCATAACTACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | CTAGTTAAAAGACAGTGTTTGCATGAGAGTGTGCAGTaGTGCCTGAGTCCTGGTACCTTGAAAAGCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVKRQCLHESVQ*CLSPGTLKSFV Trigger: GACAAAGCTTTTCAAGGTACCAGGACTCAGGCACCACTGCACACTCTCATGCAAACACTGTCTTTTAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACGCAAATGTGAATGACTaGAATACTCTTTCCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TTKFLSILERPGGFGSFNANVND*NTLSCS Trigger: AGAGCAGGAAAGAGTATTCAAGTCATTCACATTTGC...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | TGCTTGAAATCTGCGCTCACAGAGAATCCCGGGCTGTaGAGATTACCATTAGCTTCTATTTTTCAGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLKSALTENPGL*RLPLASIFQKS Trigger: TGACTTCTGAAAAATAGAAGCTAATGGTAATCTGCACAGCCCGGGATTCTCTGTGAGCGCAGATTTCAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | CTTTGTCTAAGAATGCAACAACACTTACCTCAAGCTTaGTCAAATGGAAACGTCCTTAGCCCCTTTCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLRMQQHLPQA*SNGNVLSPFPG Trigger: ACCAGGAAAGGGGCTAAGGACGTTTCCATTTGAGCAAGCTTGAGGTAAGTGTTGTTGCATTCTTAGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | CTCCCAAGTACTAGGATTAAAGGCGTGCACCACCACTaGTTGGCCAGTATTGAATTTTTGAAAGACTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSTRIKGVHHH*LASIEFLKDYY Trigger: GTAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAGTGGTGGTGCACGCCTTTAATCCTAGTACTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | TTAAATTTGTGTGTGGCACATGTCAGAACGCAAATATaGAGGTCAGGAGACAACTTATGGCAGCTGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNLCVAHVRTQI*RSGDNLWQLVL Trigger: GAGAACCAGCTGCCATAAGTTGTCTCCTGACCTCCATATTTGCGTTCTGACATGTGCCACACACAAATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | GATCAAGCAAATGCAGTGTTTCTGAAGGCCCTGTTCTaGCTCCTCTTTGACTTCTACATCTCTTTTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: DQANAVFLKALF*LLFDFYISFRP Trigger: TGGTCTAAAAGAGATGTAGAAGTCAAAGAGGAGCCAGAACAGGGCCTTCAGAAACACTGCATTTGCTTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | TCCTCTTTGACTTCTACATCTCTTTTAGACCATGCCTaGGTTCCTAGGATTGAAGAATTCCACCAGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLTSTSLLDHA*VPRIEEFHQDL Trigger: AAGATCCTGGTGGAATTCTTCAATCCTAGGAACCCAGGCATGGTCTAAAAGAGATGTAGAAGTCAAAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTCACTAAGTGTCATGTaGAATCACACCGTTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMSLSVM*NHTVPL Trigger: GAGAGGAACGGTGTGATTCAACATGACACTTAGTGA...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR TCA 72 bp | GTTTTGATTACAGGCGTGCTCAACCATTCCCTGCTATaGTTAGAACTATTTCTAGCACACAGTGAGTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLITGVLNHSLL*LELFLAHSELG Trigger: TCCTAACTCACTGTGTGCTAGAAATAGTTCTAATCATAGCAGGGAATGGTTGAGCACGCCTGTAATCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | GCGTGCACCACCACTGCTTGGCCAGTATTGAATTTTTaGAAGACTACTACAGATACATTCATACTAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ACTTTAWPVLNF*KTTTDTFILGF Trigger: AAACCCTAGTATGAATGTATCTGTAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAGTGGTGGTGCACGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | TGTGGGAAGTCGCTTCTGCAGTTACTCTTTCTTCAGTaGCTTAAATTACAGAGGTTTTCCTCCCTATTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CGKSLLQLLFLQ*LKLQRFSSLFG Trigger: ACCAAATAGGGAGGAAAACCTCTGTAATTTAAGTCACTGAAGAAAGAGTAACTGCAGAAGCGACTTCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | ATGATACTGTGGTTGGCAGATAAAGGACATGTTGTGTaGTTCACAAGAATGGTAGGATCTGTCTGTCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MILWLADKGHVV*FTRMVGSVCLV Trigger: GACTAGACAGACAGATCCTACCATTCTTGTGAATCACACAACATGTCCTTTATCTGCCAACCACAGTATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | ACGGTGAAGAGCATTCCACTGAGGTTTCATGCTAAATaGATGAGGTTGAGAACAGGCTGTTATGAACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TVKSIPLRFHAK*MRLRTGCYEQD Trigger: ATCTTGTTCATAACAGCCTGTTCTCAACCTCATTCATTTAGCATGAAACCTCAGTGGAATGCTCTTCACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | AGCTCTCTTATTGAGATTAGTATGTTCATATGGAGATaGATACAGCAATTTCCCCATGCTATCATGGGCACG | + |
|
Preference number: 3 (lower is better) Translates to: SSLIEISMFIWR*IQQFPHAIMGT Trigger: CGTGCCCATGATAGCATGGGGAAATTGCTGTATCCATCTCCATATGAACATACTAATCTCAATAAGAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | TCTTCAACTAAAAGAAACCTTTTGTTCTGTGCTCACTaGGCTCTATCTGGGTTCCTGTTGAAACTTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSTKRNLLFCAH*ALSGFLLKLKV Trigger: CACCTTAAGTTTCAACAGGAACCCAGATAGAGCCCAGTGAGCACAGAACAAAAGGTTTCTTTTAGTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CCA 72 bp | TGCATAAGTTTTTGTGGAGTATCTGGGGGCCTTGTCTaGCTAAACAATAGGACAAGAAACATGCTTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CISFCGVSGGLV*LNNRTRNMLEE Trigger: TTCTTCAAGCATGTTTCTTGTCCTATTGTTTAGCCAGACAAGGCCCCCAGATACTCCACAAAAACTTATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCATCACTAAGTGTCATGTaGAATCACACCGTTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPIISSMRMELFKALSDSSLSVM*NHTVPL Trigger: GAGAGGAACGGTGTGATTCAACATGACACTTAGTGA...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR TCA 72 bp | TTGACAACTAGCTTTCCTCCTTTTATGAATCAGAGCTaGATCTTACAAGCTGTCCACTGTCTTCAAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTTSFPPFMNQS*ILQAVHCLQGH Trigger: ATGACCTTGAAGACAGTGGACAGCTTGTAAGATTCAGCTCTGATTCATAAAAGGAGGAAAGCTAGTTGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | TCTGGGTTCCTGTTGAAACTTAAGGTGAAAGGACAGTaGCAGGCCAGTAATCGTTTGATACTTTCTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGFLLKLKVKGQ*QASNRLILSRK Trigger: TTTTCTAGAAAGTATCAAACGATTACTGGCCTGTCACTGTCCTTTCACCTTAAGTTTCAACAGGAACCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AAATTCCACATGATTGAAACGAGTAAAAGCAAAGGCTaGAGTGTAACATCCCCCATTTCTTGTTTGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: KFHMIETSKSKG*SVTSPISCLAH Trigger: ATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTTTTACTCGTTTCAATCATGTGGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR CCA 72 bp | AGGTTGAGCTCTCTTATTGAGATTAGTATGTTCATATaGAGATGGATACAGCAATTTCCCCATGCTATCATG | + |
|
Preference number: 3 (lower is better) Translates to: RLSSLIEISMFI*RWIQQFPHAIM Trigger: CATGATAGCATGGGGAAATTGCTGTATCCATCTCCATATGAACATACTAATCTCAATAAGAGAGCTCAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAAAACTGGTGGATCTTTaGATGGCCTTCATTTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPIISSMRMELFKALSDSKLVDL*MAFIYE Trigger: CTCATAAATGAAGGCCATCAAAAGATCCACCAGTTT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGTATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAAAAACTGGTGGATCTTTaGATGGCCTTCATTTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: GYVFTYHRIKSKVRVRRQKLVDL*MAFIYE Trigger: CTCATAAATGAAGGCCATCAAAAGATCCACCAGTTT...TTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACATACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156082.3 |
||
| 3UTR TCA 72 bp | GTGGGGTGTGATGAATCTGAAACTCTTCATATCAGTTaGATGAAAGTTATAGTGAACAAAGCAATCAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGCDESETLHIS*MKVIVNKAISV Trigger: CACACTGATTGCTTTGTTCACTATAACTTTCATTCAACTGATATGAAGAGTTTCAGATTCATCACACCCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAAAACTGGTGGATCTTTaGATGGCCTTCATTTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLMATGWEASLIRTKFSSKLVDL*MAFIYE Trigger: CTCATAAATGAAGGCCATCAAAAGATCCACCAGTTT...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCATGCTTTAGTGCTTATTaGAGGAGACTGCTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLMATGWEASLIRTKFSSCFSAY*RRLLSS Trigger: ACTAGAAAGCAGTCTCCTCAAATAAGCACTAAAGCA...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAAAAATGATACTGTGGTaGGCAGATAAAGGACATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GLMATGWEASLIRTKFSSKMILW*ADKGHV Trigger: AACATGTCCTTTATCTGCCAACCACAGTATCATTTT...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | TTGTTCCTTCACTGCCTTAATAGCCAACAAGTTTACTaGATATCTCTTGTGTGTCAAATTCTAAGTAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFLHCLNSQQVY*ISLVCQILSRR Trigger: TCTCCTACTTAGAATTTGACACACAAGAGATATTCAGTAAACTTGTTGGCTATTAAGGCAGTGAAGGAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR GCA 72 bp | AACATGGAATTTTCCAAATGGATTATGTATCCTAACTaGCCAGAGGACAGCTTCAATTTCCTGTATAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NMEFSKWIMYPN*PEDSFNFLYKK Trigger: TTTCTTATACAGGAAATTGAAGCTGTCCTCTGGGCAGTTAGGATACATAATCCATTTGGAAAATTCCATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR TCA 72 bp | AATCAGATTGTAATCTCTAGAATGTATCTATATTACTaGCTTGCCTGCTGCAACAAACTATCAGAAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NQIVISRMYLYY*LACCNKLSEKG Trigger: GCCTTTTTCTGATAGTTTGTTGCAGCAGGCAAGTCAGTAATATAGATACATTCTAGAGATTACAATCTGATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | AAGCACCTAGCATCGAAGAGATTTGAAGTGTCAGGGTaGGGGGAATACCCAGGAGGGCCCCCACCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KHLASKRFEVSG*GEYPGGPPPAQ Trigger: CTGAGCTGGTGGGGGCCCTCCTGGGTATTCCCCCAACCCTGACACTTCAAATCTCTTCGATGCTAGGTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | ATCCATCCTAGAACTCACTCTGTAGCACAGGCTAGCTaGGAATTCAGCGATCCACCCACCTCTGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHPRTHSVAQAS*EFSDPPTSASP Trigger: TGGGGAGGCAGAGGTGGGTGGATCGCTGAATTCCAAGCTAGCCTGTGCTACAGAGTGAGTTCTAGGATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCCACTGTCTTCAAGGTCATGCACAGGGGCTGACTATTCAGCCGACTACCTCCACCATCAATGGTaGGGATTCGGATTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSSRSCTGADYSADYLHHQW*GFGFLC Trigger: GCAGAGGAATCCGAATCCTCACCATTGATGGTGGAG...GTAGTCGGCTGAATAGTCAGCCCCTGTGCATGACCTTGAAGACAGTGGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | GAATCAGAGCTGAATCTTACAAGCTGTCCACTGTCTTCAAGGTCATGCACAGGGTTTGCAGACACTGGGTaGGCCTCAGGCATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESELNLTSCPLSSRSCTGFADTG*ASGIWV Trigger: GACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAA...CCCTGTGCATGACCTTGAAGACAGTGGACAGCTTGTAAGATTCAGCTCTGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | GGATCCCAGGCTAGTGTTGAGCTCCTGATCATCCTGTaGCAGCTTTGCCTGTGTTTTGATTACAGGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQASVELLIIL*QLCLCFDYRRA Trigger: AGCACGCCTGTAATCAAAACACAGGCAAAGCTGCAACAGGATGATCAGGAGCTCAACACTAGCCTGGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCCACTGTCTTCAAGGTCATGCACAGGGGCTGACTATTCAGCCGACTACATCCAATTCTATCCTTaGGGATCTTTTCCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCPLSSRSCTGADYSADYIQFYP*GSFPTC Trigger: ACACGTGGGAAAAGATCCTCAAGGATAGAATTGGAT...GTAGTCGGCTGAATAGTCAGCCCCTGTGCATGACCTTGAAGACAGTGGACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | CAGAGTCCTGGATCCTCTCAGAATGCATTCAGGCTTTaGTGGCCTGTTACCAGTCAAAGGCTTCCTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QSPGSSQNAFRL*WPVTSQRLPMM Trigger: CATCATAGGAAGCCTTTGACTGGTAACAGGCCACAAAAGCCTGAATGCATTCTGAGAGGATCCAGGACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR GCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGAGCTACCTTAGGACATaGGGGGTTTCTCGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LELRNLPVSASQVLGLKASYLRT*GVSRCF Trigger: GAAACAGCGAGAAACCCCGCATGTCCTAAGGTAGCT...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTTTTGCAGACACTGGGTaGGCCTCAGGCATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPFADTG*ASGIWV Trigger: GACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAA...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAATTTGCAGACACTGGGTaGGCCTCAGGCATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKFADTG*ASGIWV Trigger: GACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAA...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGCTCCACCATCAATGGTaGGGATTCGGATTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMLHHQW*GFGFLC Trigger: GCAGAGGAATCCGAATCCTCACCATTGATGGTGGAG...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGTCTGGAAACTCTTTGTTGGTGTGTGGATAGCTCCTGCCAGGAACAGAACAGTGCCAGTGTTTGCTaGAATGTGCTTCACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CSLETLCWCVDSSCQEQNSASVC*NVLHFY Trigger: ATAGAAGTGAAGCACATTGCAGCAAACACTGGCACT...GTTCTGTTCCTGGCAGGAGCTATCCACACACCAACAAAGAGTTTCCAGACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR GCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGAGCAATACTTTGTTTTaGAGACACTGGGTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LELRNLPVSASQVLGLKASNTLF*RHWVSL Trigger: GAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCT...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | GCGGTGCTGAAGAGGCATAGGATACTTCCGAAAAGCTaGTGGCAAGCTGAATTGGAAACATGCAATGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: AVLKRHRILPKS*WQAELETCNEI Trigger: TATCTCATTGCATGTTTCCAATTCAGCTTGCCACAAGCTTTTCGGAAGTATCCTATGCCTCTTCAGCACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | ACTTGGGTACAGGCTAACGTGTTTCATTTTATGTACTaGAGGACTCAGATGGTTCAGGAATCAAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWVQANVFHFMY*RTQMVQESSQG Trigger: GCCCTGGCTTGATTCCTGAACCATCTGAGTCCTCAAGTACATAAAATGAAACACGTTAGCCTGTACCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGACAGGCCATCAAGCATaGTATGAACTTCCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LELRNLPVSASQVLGLKATGHQA*YELPLY Trigger: ATACAGAGGAAGTTCATATCATGCTTGATGGCCTGT...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR CCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGCCAAAGTGTAAGCCATaGTTGCTTGGAGAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMPKCKP*LLGECQ Trigger: CTGGCACTCTCCAAGCAACCATGGCTTACACTTTGG...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTCACGGTGTCAGGGCCTaGAGAACTGGATTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPHGVRA*RTGFPF Trigger: GAAAGGAAATCCAGTTCTCCAGGCCCTGACACCGTG...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CCGTTCCTCTCTAAACTGGTGGATCTTTTGATGGCCTTCATTTATGAGAACACACTTCGGGCGGACTCTTaGGATCAGACTTTAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLSKLVDLLMAFIYENTLRADS*DQTLIW Trigger: CCAAATTAAAGTCTGATCCCAAGAGTCCGCCCGAAG...TGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| 3UTR CAA 72 bp | GATTTTGATACCACATCCAGTGCCACACTATTAGTTTaGCCAAGTGTGGGAAGTCGCTTCTGCAGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFDTTSSATLLV*PSVGSRFCSYS Trigger: AGAGTAACTGCAGAAGCGACTTCCCACACTTGGCAAAACTAATAGTGTGGCACTGGATGTGGTATCAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTCATCCCTTCCAGCTaGAGCTGGTCCAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMFIPSS*SWSSFS Trigger: TGAAAAACTGGACCAGCTTCAGCTGGAAGGGATGAA...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAATTCCTCAGCATTCTGGAGAGGCCAGGAGGGTTTGGGTCGTTTAACCAAAATTTCTCTAACTaGAGCCTGAAGAGTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTKFLSILERPGGFGSFNQNFSN*SLKSFI Trigger: GATGAAACTCTTCAGGCTGCAGTTAGAGAAATTTTG...GTTAAACGACCCAAACCCTCCTGGCCTCTCCAGAATGCTGAGGAATTTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR GCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTAGCTACCTTAGGACATaGGGGGTTTCTCGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPSYLRT*GVSRCF Trigger: GAAACAGCGAGAAACCCCGCATGTCCTAAGGTAGCT...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAACACGGTGTCAGGGCCTaGAGAACTGGATTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKHGVRA*RTGFPF Trigger: GAAAGGAAATCCAGTTCTCCAGGCCCTGACACCGTG...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGCTAAATAGTGAGAGTTaGTGCCAGGAAAATGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LELRNLPVSASQVLGLKALNSES*CQENDH Trigger: ATGGTCATTTTCCTGGCACCAACTCTCACTATTTAG...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | GGCGTGCACCACCACTGCTTGGCCAGTATTGAATTTTaGAAAGACTACTACAGATACATTCATACTAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVHHHCLASIEF*KDYYRYIHTRV Trigger: AACCCTAGTATGAATGTATCTGTAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAGTGGTGGTGCACGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | CCAAGTACTAGGATTAAAGGCGTGCACCACCACTGCTaGGCCAGTATTGAATTTTTGAAAGACTACTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSTRIKGVHHHC*ASIEFLKDYYR Trigger: TCTGTAGTAGTCTTTCAAAAATTCAATACTGGCCAAGCAGTGGTGGTGCACGCCTTTAATCCTAGTACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | GCATTAAGCACTGGGCATTTCCCACATAATCAAGCATaGCAACGGATACATAGGGCATGTTTAGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTGHFPHNQA*QRIHRACLDVC Trigger: ACACACATCTAAACATGCCCTATGTATCCGTTGCAATGCTTGATTATGTGGGAAATGCCCAGTGCTTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTTTCATCCCTTCCAGCTaGAGCTGGTCCAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPFIPSS*SWSSFS Trigger: TGAAAAACTGGACCAGCTTCAGCTGGAAGGGATGAA...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTGAGAGTGCCAGTGTTTaGTGCAATGTGCTTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPESASV*CNVLHF Trigger: GAAGTGAAGCACATTGCAGCAAACACTGGCACTCTC...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCTCCATCCTTAGGACATaGGGGGTTTCTCGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTSILRT*GVSRCF Trigger: GAAACAGCGAGAAACCCCGCATGTCCTAAGGATGGA...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAACAGGTCCATCCTTAGGACATaGGGGGTTTCTCGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MFSHITGLNLKYVSEGNRSILRT*GVSRCF Trigger: GAAACAGCGAGAAACCCCGCATGTCCTAAGGATGGA...CCTGTTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218803.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCCCAAAGTGTAAGCCATaGTTGCTTGGAGAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTPKCKP*LLGECQ Trigger: CTGGCACTCTCCAAGCAACCATGGCTTACACTTTGG...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTCAGGGCCTGGAGAACTaGATTTCCTTTCTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPQGLEN*ISFLQG Trigger: ACCTTGAAGAAAGGAAATCCAGTTCTCCAGGCCCTG...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTCTTCGGGCGGACTCTTaGGATCAGACTTTAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPLRADS*DQTLIW Trigger: CCAAATTAAAGTCTGATCCCAAGAGTCCGCCCGAAG...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CTCGAACTCAGAAATCTACCTGTTTCTGCCTCCCAAGTACTAGGATTAAAGGCGGAACACAAAAGCTTTTaGTGTTTGTCCTCTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LELRNLPVSASQVLGLKAEHKSF*CLSSVY Trigger: GTAAACAGAGGACAAACACCAAAAGCTTTTGTGTTC...CGCCTTTAATCCTAGTACTTGGGAGGCAGAAACAGGTAGATTTCTGAGTTCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | TCTGGATTATTACTACAGAGAAGAGTTCAACATTTGTaGAATGGGGTTGCTGAGGAGGCTCAGAGCTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGLLLQRRVQHL*NGVAEEAQSLR Trigger: TCTTAAGCTCTGAGCCTCCTCAGCAACCCCATTCAACAAATGTTGAACTCTTCTCTGTAGTAATAATCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| 3UTR CAA 72 bp | GTATCTGGATTATTACTACAGAGAAGAGTTCAACATTaGTTGAATGGGGTTGCTGAGGAGGCTCAGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSGLLLQRRVQH*LNGVAEEAQSL Trigger: TAAGCTCTGAGCCTCCTCAGCAACCCCATTCAACAAATGTTGAACTCTTCTCTGTAGTAATAATCCAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | CCGTTCCTCTCTAAACTGGTGGATCTTTTGATGGCCTTCATTTATGAGAACACACTTTTCTTACTTGTGTaGAACTCTCTGTGCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFLSKLVDLLMAFIYENTLFLLV*NSLCTL Trigger: CAATGTGCACAGAGAGTTTCACACAAGTAAGAAAAG...TGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTCTCTAACTGCAGCCTaGAGAGTTTCATCCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMSLTAA*RVSSLT Trigger: AGTTAAGGATGAAACTCTTCAGGCTGCAGTTAGAGA...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCATTCATCCCTTCCAGCTaGAGCTGGTCCAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSFIPSS*SWSSFS Trigger: TGAAAAACTGGACCAGCTTCAGCTGGAAGGGATGAA...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAGAGAGTGCCAGTGTTTaGTGCAATGTGCTTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSESASV*CNVLHF Trigger: GAAGTGAAGCACATTGCAGCAAACACTGGCACTCTC...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTCCTCTCTAAACTGGTGGATCTTTTGATGGCCTTCATTTATGAGAACACAACGCTTTTTCTCCTCTaGCTTCTTGTCTTTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFLSKLVDLLMAFIYENTTLFLL*LLVFVN Trigger: GTTAACAAAGACAAGAAGGCAGAGGAGAAAAAGCGT...TGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGGAACTTGGCTTAAATTaGGCTAACCGTGTAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMELGLN*ANRVTI Trigger: AATGGTTACACGGTTAGCTCAATTTAAGCCAAGTTC...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAAGGTCTGGCTTGTCCTaGAGCTGTTTATCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKRSGLS*SCLSSF Trigger: AAAGGAAGATAAACAGCTTCAGGACAAGCCAGACCT...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTACAGGCCATCAAGCATaGTATGAACTTCCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPTGHQA*YELPLY Trigger: ATACAGAGGAAGTTCATATCATGCTTGATGGCCTGT...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAAGCAATACTTTGTTTTaGAGACACTGGGTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKSNTLF*RHWVSL Trigger: GAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCT...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAAGCAATACTTTGTTTTaGAGACACTGGGTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSSNTLF*RHWVSL Trigger: GAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| 3UTR CAA 72 bp | TGTCTGTCTAGTCCTGAACTGAATGTCTCTGGGATCTaGATAGGGTTTGTGTTACATCTGCAAGTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPELNVSGI*IGFVLHLQVDF Trigger: AAAATCAACTTGCAGATGTAACACAAACCCTATCAAGATCCCAGAGACATTCAGTTCAGGACTAGACAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGATAATCTTTTCTTGCTaGAGTAGCACACGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMIIFSC*SSTRFF Trigger: GAAAAAGCGTGTGCTACTTCAGCAAGAAAAGATTAT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCATCTCTAACTGCAGCCTaGAGAGTTTCATCCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSSLTAA*RVSSLT Trigger: AGTTAAGGATGAAACTCTTCAGGCTGCAGTTAGAGA...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCTCTCTAACTGCAGCCTaGAGAGTTTCATCCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTSLTAA*RVSSLT Trigger: AGTTAAGGATGAAACTCTTCAGGCTGCAGTTAGAGA...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCATCCAATTCTATCCTTaGGGATCTTTTCCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTIQFYP*GSFPTC Trigger: ACACGTGGGAAAAGATCCTCAAGGATAGAATTGGAT...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAATCCAATTCTATCCTTaGGGATCTTTTCCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSIQFYP*GSFPTC Trigger: ACACGTGGGAAAAGATCCTCAAGGATAGAATTGGAT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | GGTATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAACATCCAATTCTATCCTTaGGGATCTTTTCCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMFSHITGLNLKYVSEGNIQFYP*GSFPTC Trigger: ACACGTGGGAAAAGATCCTCAAGGATAGAATTGGAT...GTTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218803.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAACAGGCCATCAAGCATaGTATGAACTTCCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKTGHQA*YELPLY Trigger: ATACAGAGGAAGTTCATATCATGCTTGATGGCCTGT...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGGTGTTTGCTGCAATGTaGTTCACTTCTATTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMVFAAM*FTSIPF Trigger: AAATGGAATAGAAGTGAAGCACATTGCAGCAAACAC...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGACTCTCCAAATCTGGTaGTTATACCGTATGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMTLQIW*LYRMCN Trigger: ATTACACATACGGTATAACCACCAGATTTGGAGAGT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCCTTTTCTTACTTGTGTaGAACTCTCTGTGCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTLFLLV*NSLCTL Trigger: CAATGTGCACAGAGAGTTTCACACAAGTAAGAAAAG...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGCAAAATGCAATTGTTTaGTTCTCTGTTTCCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMQNAIV*FSVSHK Trigger: TTTGTGGGAAACAGAGAAGCAAACAATTGCATTTTG...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAACGCTTTTTCTCCTCTaGCTTCTTGTCTTTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVCQILSRRYSNRDKKGRTLFLL*LLVFVN Trigger: GTTAACAAAGACAAGAAGGCAGAGGAGAAAAAGCGT...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCACGCTTTTTCTCCTCTaGCTTCTTGTCTTTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTTLFLL*LLVFVN Trigger: GTTAACAAAGACAAGAAGGCAGAGGAGAAAAAGCGT...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTCAAAATTTCTCTAACTaGAGCCTGAAGAGTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPQNFSN*SLKSFI Trigger: GATGAAACTCTTCAGGCTGCAGTTAGAGAAATTTTG...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTGAACACAAAAGCTTTTaGTGTTTGTCCTCTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPEHKSF*CLSSVY Trigger: GTAAACAGAGGACAAACACCAAAAGCTTTTGTGTTC...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000156082.3 |
||
| CDS-3UTR CCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCACTAAATAGTGAGAGTTaGTGCCAGGAAAATGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSLNSES*CQENDH Trigger: ATGGTCATTTTCCTGGCACCAACTCTCACTATTTAG...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000156082.3 |
||
| CDS-3UTR CCA 90 bp | GGTATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAACCTAAATAGTGAGAGTTaGTGCCAGGAAAATGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMFSHITGLNLKYVSEGNLNSES*CQENDH Trigger: ATGGTCATTTTCCTGGCACCAACTCTCACTATTTAG...GTTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156082.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTAATGGCAACAGGATGGGAGGCAAGTTTAATTAGAACAAAATTTTCTTCAGAACTTGGCTTAAATTaGGCTAACCGTGTAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLMATGWEASLIRTKFSSELGLN*ANRVTI Trigger: AATGGTTACACGGTTAGCTCAATTTAAGCCAAGTTC...TGAAGAAAATTTTGTTCTAATTAAACTTGCCTCCCATCCTGTTGCCATTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAATAATCTTTTCTTGCTaGAGTAGCACACGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCQILSRRYSNRDKKGRIIFSC*SSTRFF Trigger: GAAAAAGCGTGTGCTACTTCAGCAAGAAAAGATTAT...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR TCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAATAATCTTTTCTTGCTaGAGTAGCACACGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSIIFSC*SSTRFF Trigger: GAAAAAGCGTGTGCTACTTCAGCAAGAAAAGATTAT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAGTGTTTGCTGCAATGTaGTTCACTTCTATTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSVFAAM*FTSIPF Trigger: AAATGGAATAGAAGTGAAGCACATTGCAGCAAACAC...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR GCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCACAAAATTTCTCTAACTaGAGCCTGAAGAGTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSQNFSN*SLKSFI Trigger: GATGAAACTCTTCAGGCTGCAGTTAGAGAAATTTTG...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
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| CDS-3UTR CCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAACTCTCCAAATCTGGTaGTTATACCGTATGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSTLQIW*LYRMCN Trigger: ATTACACATACGGTATAACCACCAGATTTGGAGAGT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAGAACACAAAAGCTTTTaGTGTTTGTCCTCTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSEHKSF*CLSSVY Trigger: GTAAACAGAGGACAAACACCAAAAGCTTTTGTGTTC...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000156082.3 |
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| CDS-3UTR GCA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCACAAAATGCAATTGTTTaGTTCTCTGTTTCCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPIISSMRMELFKALSDSQNAIV*FSVSHK Trigger: TTTGTGGGAAACAGAGAAGCAAACAATTGCATTTTG...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS CCA 90 bp | ATACCGTCCTGTGCCCAAGGATACTATACACTCCAGTGGCGTATCTaGCCAGATGCATTTACATTCGTGAAGGGCCAAGGCCGAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IPSCAQGYYTLQWRI*PDAFTFVKGQGRRV Trigger: AACCCTTCGGCCTTGGCCCTTCACGAATGTAAATGCATCTGGCCAGATACGCCACTGGAGTGTATAGTATCCTTGGGCACAGGACGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 ENSMUST00000218803.2 |
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| CDS CCA 90 bp | ATCACTCTCATACCGTCCTGTGCCCAAGGATACTATACACTCCAGTaGCGTATCTGGCCAGATGCATTTACATTCGTGAAGGGCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITLIPSCAQGYYTLQ*RIWPDAFTFVKGQG Trigger: GCCTTGGCCCTTCACGAATGTAAATGCATCTGGCCAGATACGCCACTGGAGTGTATAGTATCCTTGGGCACAGGACGGTATGAGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 ENSMUST00000218803.2 |
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| CDS CCA 90 bp | AGTGGGACGAGAAAGGAAGTTAGCAATACTTTGTTTTGCAGACACTaGGTGAGCCTCAGGCATCTGGGTCGGGCTGGAAAGTTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGTRKEVSNTLFCRH*VSLRHLGRAGKFVF Trigger: AAAGACAAACTTTCCAGCCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCTTTCTCGTCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
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| CDS TCA 90 bp | GGACGAGAAAGGAAGTTAGCAATACTTTGTTTTGCAGACACTGGGTaGGCCTCAGGCATCTGGGTCGGGCTGGAAAGTTTGTCTTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: GRERKLAILCFADTG*ASGIWVGLESLSLT Trigger: AGTTAAAGACAAACTTTCCAGCCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCTTTCTCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCTGGAAACTCTTTGTTGGTGTGTGGATAGCTCCTGCCAGGAACAGAACGTCGGGCTGGAAAGTTaGTCTTTAACTTCTAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLETLCWCVDSSCQEQNVGLES*SLTSRG Trigger: TCCCCTAGAAGTTAAAGACAAACTTTCCAGCCCGAC...GTTCTGTTCCTGGCAGGAGCTATCCACACACCAACAAAGAGTTTCCAGACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS TCA 90 bp | ACTCATTTTGACGGTCCCGACAATGACATTCTGTGTGAACACATCTaGGCCCAACTTTCGATAGAGTTCCTCACATTCATCCAGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: THFDGPDNDILCEHI*AQLSIEFLTFIQRH Trigger: ATGCCGCTGGATGAATGTGAGGAACTCTATCGAAAGTTGGGCTCAGATGTGTTCACACAGAATGTCATTGTCGGGACCGTCAAAATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000218803.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGTCCACTGTCTTCAAGGTCATGCACAGGGGCTGACTATTCAGCCGACTACACAAAATGCAATTGTTaGCTTCTCTGTTTCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SCPLSSRSCTGADYSADYTKCNC*LLCFPQ Trigger: TTGTGGGAAACAGAGAAGCAAACAATTGCATTTTGT...GTAGTCGGCTGAATAGTCAGCCCCTGTGCATGACCTTGAAGACAGTGGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| CDS-3UTR CAA 90 bp | CCGTTCCTCTCTAAACTGGTGGATCTTTTGATGGCCTTCATTTATGAGAACACAGTAAGCCATGGTTGCTaGGAGAGTGCCAGTGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFLSKLVDLLMAFIYENTVSHGC*ESASVC Trigger: GCAAACACTGGCACTCTCCAAGCAACCATGGCTTAC...TGTGTTCTCATAAATGAAGGCCATCAAAAGATCCACCAGTTTAGAGAGGAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCTGGAAACTCTTTGTTGGTGTGTGGATAGCTCCTGCCAGGAACAGAACTACAGCTTTTCTTACTaGTGTGAAACTCTCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLETLCWCVDSSCQEQNYSFSY*CETLCA Trigger: TGCACAGAGAGTTTCACACAAGTAAGAAAAGCTGTA...GTTCTGTTCCTGGCAGGAGCTATCCACACACCAACAAAGAGTTTCCAGACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
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| CDS-3UTR CAA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTGAGCAACCACACCTCTaGTTCCTCCACCATCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPEQPHL*FLHHQW Trigger: CCATTGATGGTGGAGGAACAAGAGGTGTGGTTGCTC...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAGTAAGCCATGGTTGCTaGGAGAGTGCCAGTGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKVSHGC*ESASVC Trigger: GCAAACACTGGCACTCTCCAAGCAACCATGGCTTAC...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAGAGCAACCACACCTCTaGTTCCTCCACCATCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKEQPHL*FLHHQW Trigger: CCATTGATGGTGGAGGAACAAGAGGTGTGGTTGCTC...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGAAGCAAACCTCCATCTaGATGAAGATCACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMKQTSI*MKITPQ Trigger: CTGGGGAGTGATCTTCATCAAGATGGAGGTTTGCTT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000156082.3 |
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| CDS GCA 90 bp | TTCCAAAGTGTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTTGCTaGAATGTGCTTCACTTCTATTCCATTTACAGCTTTTCTTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQSVSHGCLESASVC*NVLHFYSIYSFSYL Trigger: CAAGTAAGAAAAGCTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTACACTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS GCA 90 bp | CAATTCCAAAGTGTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTTaGTGCAATGTGCTTCACTTCTATTCCATTTACAGCTTTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: QFQSVSHGCLESASV*CNVLHFYSIYSFSY Trigger: GTAAGAAAAGCTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTACACTTTGGAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAGGAGAGTGCCAGTGTTaGCTGCAATGTGCTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKGECQC*LQCASL Trigger: AAGTGAAGCACATTGCAGCAAACACTGGCACTCTCC...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAGGAGAGTGCCAGTGTTaGCTGCAATGTGCTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LPIISSMRMELFKALSDSGECQC*LQCASL Trigger: AAGTGAAGCACATTGCAGCAAACACTGGCACTCTCC...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCAAGTGTAAGCCATGGTaGCTTGGAGAGTGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTKCKPW*LGECQC Trigger: ACACTGGCACTCTCCAAGCAACCATGGCTTACACTT...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAAAGTGTAAGCCATGGTaGCTTGGAGAGTGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKKCKPW*LGECQC Trigger: ACACTGGCACTCTCCAAGCAACCATGGCTTACACTT...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGACTTTTGTAAGTCCCTaGGGAGCAGAAGTGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMTFVSP*GAEVLS Trigger: ACTTAGCACTTCTGCTCCCAAGGGACTTACAAAAGT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAGTCGGGCTGGAAAGTTaGTCTTTAACTTCTAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPIISSMRMELFKALSDSVGLES*SLTSRG Trigger: TCCCCTAGAAGTTAAAGACAAACTTTCCAGCCCGAC...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCAAGCAAACCTCCATCTaGATGAAGATCACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKHYLIQDNSLSVMLNHTKQTSI*MKITPQ Trigger: CTGGGGAGTGATCTTCATCAAGATGGAGGTTTGCTT...GGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000156082.3 |
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| CDS-3UTR CAA 90 bp | ATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAACAGGAAGCAAACCTCCATCTaGATGAAGATCACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MFSHITGLNLKYVSEGNRKQTSI*MKITPQ Trigger: CTGGGGAGTGATCTTCATCAAGATGGAGGTTTGCTT...CCTGTTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156082.3 |
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| CDS-3UTR CAA 90 bp | AAATCTAAAGTACGTGTCAGAAGGCAACAGGCCATCAAGCATGATATGAACTTCATAACATTAGAGAGCTaGGTCTTCAGGCTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KSKVRVRRQQAIKHDMNFITLES*VFRLVY Trigger: ATACACGAGCCTGAAGACCAAGCTCTCTAATGTTAT...GAAGTTCATATCATGCTTGATGGCCTGTTGCCTTCTGACACGTACTTTAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156082.3 ENSMUST00000218803.2 |
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| CDS TCA 90 bp | CAATGTGCTTCACTTCTATTCCATTTACAGCTTTTCTTACTTGTGTaGAACTCTCTGTGCACATTGACATGGTTCATGCGCCAATACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QCASLLFHLQLFLLV*NSLCTLTWFMRQYC Trigger: ACAGTATTGGCGCATGAACCATGTCAATGTGCACAGAGAGTTTCACACAAGTAAGAAAAGCTGTAAATGGAATAGAAGTGAAGCACATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000125757.2 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGACACACAAAATGCAATaGTTTGCTTCTCTGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMTHKMQ*FASLFP Trigger: GGGAAACAGAGAAGCAAACAATTGCATTTTGTGTGT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGGCTGAAGTGTAACATCCCCCATTTCTTGTTTGGCACATATATTAAAACTTTTGTAAGTCCCTaGGGAGCAGAAGTGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KQRLKCNIPHFLFGTYIKTFVSP*GAEVLS Trigger: ACTTAGCACTTCTGCTCCCAAGGGACTTACAAAAGT...TTTAATATATGTGCCAAACAAGAAATGGGGGATGTTACACTTCAGCCTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CAA 90 bp | CATTATCTGATTCAGGATAACTCACTAAGTGTCATGTTGAATCACACCGTTCCTATAACATTAGAGAGCTaGGTCTTCAGGCTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HYLIQDNSLSVMLNHTVPITLES*VFRLVY Trigger: ATACACGAGCCTGAAGACCAAGCTCTCTAATGTTAT...AGGAACGGTGTGATTCAACATGACACTTAGTGAGTTATCCTGAATCAGATAATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
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| CDS-3UTR CAA 90 bp | GGATGGAGCTGTTCAAAGCATTATCTGATTCAGGATAACTCACTAAGTGTCATGACAAAATGCAATTGTTaGCTTCTCTGTTTCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GWSCSKHYLIQDNSLSVMTKCNC*LLCFPQ Trigger: TTGTGGGAAACAGAGAAGCAAACAATTGCATTTTGT...CATGACACTTAGTGAGTTATCCTGAATCAGATAATGCTTTGAACAGCTCCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTGTCAAATTCTAAGTAGGAGATACAGCAATAGAGATAAGAAGGGTAGAATAACATTAGAGAGCTaGGTCTTCAGGCTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LVCQILSRRYSNRDKKGRITLES*VFRLVY Trigger: ATACACGAGCCTGAAGACCAAGCTCTCTAATGTTAT...TCTACCCTTCTTATCTCTATTGCTGTATCTCCTACTTAGAATTTGACACACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043082.16 |
||
| CDS-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAATAACATTAGAGAGCTaGGTCTTCAGGCTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LPIISSMRMELFKALSDSITLES*VFRLVY Trigger: ATACACGAGCCTGAAGACCAAGCTCTCTAATGTTAT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000156082.3 |
||
| CDS-3UTR CAA 90 bp | GGGTATGTTTTCACATATCACAGGATTAAATCTAAAGTACGTGTCAGAAGGCAAATAACATTAGAGAGCTaGGTCTTCAGGCTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GYVFTYHRIKSKVRVRRQITLES*VFRLVY Trigger: ATACACGAGCCTGAAGACCAAGCTCTCTAATGTTAT...TTGCCTTCTGACACGTACTTTAGATTTAATCCTGTGATATGTGAAAACATACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156082.3 ENSMUST00000218803.2 |
||
| CDS-3UTR CAA 90 bp | TTACCAATCATATCTTCCATGAGGATGGAGCTGTTCAAAGCATTATCTGATTCAACACACAAAATGCAATaGTTTGCTTCTCTGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPIISSMRMELFKALSDSTHKMQ*FASLFP Trigger: GGGAAACAGAGAAGCAAACAATTGCATTTTGTGTGT...TGAATCAGATAATGCTTTGAACAGCTCCATCCTCATGGAAGATATGATTGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
||
| CDS CCA 72 bp | TTCCGAGTCTGGCCTGTCTGCCACGGTGTCAGGGCCTaGAGAACTGGATTTCCTTTCTTCAAGGTCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FRVWPVCHGVRA*RTGFPFFKVWL Trigger: AAGCCAGACCTTGAAGAAAGGAAATCCAGTTCTCCAGGCCCTGACACCGTGGCAGACAGGCCAGACTCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 ENSMUST00000218954.2 |
||
| CDS CAA 90 bp | GGCTTGTACGCCTTCAGTGGGACGAGAAAGGAAGTTAGCAATACTTaGTTTTGCAGACACTGGGTGAGCCTCAGGCATCTGGGTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLYAFSGTRKEVSNT*FCRHWVSLRHLGRA Trigger: AGCCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCTTTCTCGTCCCACTGAAGGCGTACAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS TCA 72 bp | AGGAAGTTAGCAATACTTTGTTTTGCAGACACTGGGTaGGCCTCAGGCATCTGGGTCGGGCTGGAAAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKLAILCFADTG*ASGIWVGLESL Trigger: CAAACTTTCCAGCCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS CCA 72 bp | AGAAAGGAAGTTAGCAATACTTTGTTTTGCAGACACTaGGTGAGCCTCAGGCATCTGGGTCGGGCTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKEVSNTLFCRH*VSLRHLGRAGK Trigger: CTTTCCAGCCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
||
| CDS CAA 72 bp | GCCTTCAGTGGGACGAGAAAGGAAGTTAGCAATACTTaGTTTTGCAGACACTGGGTGAGCCTCAGGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: AFSGTRKEVSNT*FCRHWVSLRHL Trigger: CAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTGCTAACTTCCTTTCTCGTCCCACTGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000122902.8 ENSMUST00000143771.2 |
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| CDS GCA 72 bp | AGTGTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTTaGTGCAATGTGCTTCACTTCTATTCCATTTACAGC | + |
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Preference number: 6 (lower is better) Translates to: SVSHGCLESASV*CNVLHFYSIYS Trigger: GCTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS GCA 72 bp | GTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTTGCTaGAATGTGCTTCACTTCTATTCCATTTACAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSHGCLESASVC*NVLHFYSIYSF Trigger: AAAGCTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS CAA 72 bp | AAGTGTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTaGCTGCAATGTGCTTCACTTCTATTCCATTTACAG | + |
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Preference number: 6 (lower is better) Translates to: KCKPWLLGECQC*LQCASLLFHLQ Trigger: CTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS CAA 90 bp | ACAATTCCAAAGTGTAAGCCATGGTTGCTTGGAGAGTGCCAGTGTTaGCTGCAATGTGCTTCACTTCTATTCCATTTACAGCTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: TIPKCKPWLLGECQC*LQCASLLFHLQLFL Trigger: TAAGAAAAGCTGTAAATGGAATAGAAGTGAAGCACATTGCAGCAAACACTGGCACTCTCCAAGCAACCATGGCTTACACTTTGGAATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS TCA 72 bp | TCACTTCTATTCCATTTACAGCTTTTCTTACTTGTGTaGAACTCTCTGTGCACATTGACATGGTTCATGCGC | + |
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Preference number: 6 (lower is better) Translates to: SLLFHLQLFLLV*NSLCTLTWFMR Trigger: GCGCATGAACCATGTCAATGTGCACAGAGAGTTTCACACAAGTAAGAAAAGCTGTAAATGGAATAGAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000125757.2 ENSMUST00000143771.2 |
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| CDS CCA 72 bp | GATTTGCTAAAACGGAGAATGACTCTCCAAATCTGGTaGTTATACCGTATGTGTAATGGAAAAGGCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: DLLKRRMTLQIW*LYRMCNGKGCV Trigger: AACACAGCCTTTTCCATTACACATACGGTATAACCACCAGATTTGGAGAGTCATTCTCCGTTTTAGCAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043082.16 ENSMUST00000143771.2 |
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| CDS CAA 90 bp | GACATGGTTCATGCGCCAATACTGTTTAGAACACACAAAATGCAATaGTTTGCTTCTCTGTTTCCCACAAAGACTTCTTGCATTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: DMVHAPILFRTHKMQ*FASLFPTKTSCIIK Trigger: CTTAATAATGCAAGAAGTCTTTGTGGGAAACAGAGAAGCAAACAATTGCATTTTGTGTGTTCTAAACAGTATTGGCGCATGAACCATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043082.16 ENSMUST00000125757.2 ENSMUST00000143771.2 |
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