RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPLA7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036833

Ensembl transcript IDs: ENSMUST00000045295.14, ENSMUST00000137913.8, ENSMUST00000146153.2, ENSMUST00000152777.2, ENSMUST00000153618.8, ENSMUST00000155601.2

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGTTCTGAGTCCCGGACAGCATGCACTGTGGTTGCTCTGGCCTaGTGGGTCAGCGTCTCCACCACACCAACAAGGTCTCCTCGGCCA +
Preference number: 1 (lower is better)
Translates to: ASSESRTACTVVALA*WVSVSTTPTRSPRP
Trigger: TGGCCGAGGAGACCTTGTTGGTGTGGTGGAGACGCTGACCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTCAGAACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp GAGGCCCAGAGACTGTCACACAGCTGCTCCCATGATCTGAGCTGCTaGACTCCGAGGGCCGTAGGGACCTCTCAAGCTGCTCCTCTGGAC +
Preference number: 1 (lower is better)
Translates to: EAQRLSHSCSHDLSC*TPRAVGTSQAAPLD
Trigger: GTCCAGAGGAGCAGCTTGAGAGGTCCCTACGGCCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCTCTGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp CTCCTCTTCAGCAGAGGCCCAGAGACTGTCACACAGCTGCTCCCATaGTCTGAGCTGCTGAACTCCGAGGGCCGTAGGGACCTCTCAAGC +
Preference number: 1 (lower is better)
Translates to: LLFSRGPETVTQLLP*SELLNSEGRRDLSS
Trigger: GCTTGAGAGGTCCCTACGGCCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCTCTGGGCCTCTGCTGAAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp GCGCTTGATAGACGTCAGAGCTCCTGCTGGCAGCTTAGCCAGTTCTaGGTCCCGGACAGCATGCACTGTGGTTGCTCTGGCCTGGTGGGT +
Preference number: 1 (lower is better)
Translates to: ALDRRQSSCWQLSQF*VPDSMHCGCSGLVG
Trigger: ACCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTCAGAACTGGCTAAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp AGGCGGTTAGGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTaGACAGATTGCCAGGCGGGTTCCCCAAGTCCCATTTGCTGCTTG +
Preference number: 1 (lower is better)
Translates to: RRLGAHPQKQAVLPL*TDCQAGSPSPICCL
Trigger: CAAGCAGCAAATGGGACTTGGGGAACCCGCCTGGCAATCTGTCCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp AGTTCTGAGTCCCGGACAGCATGCACTGTGGTTGCTCTGGCCTGGTaGGTCAGCGTCTCCACCACACCAACAAGGTCTCCTCGGCCATAT +
Preference number: 1 (lower is better)
Translates to: SSESRTACTVVALAW*VSVSTTPTRSPRPY
Trigger: ATATGGCCGAGGAGACCTTGTTGGTGTGGTGGAGACGCTGACCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTCAGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GGGCAGGTGAACACCCCACAGTCCTTCCTCTTGCTTGTCCCCTGCTaGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATG +
Preference number: 1 (lower is better)
Translates to: GQVNTPQSFLLLVPC*SCNIFSRTPLRTQM
Trigger: CATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTGGGGTGTTCACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp CTGTCTGAGCTCATCCACCTCCCCATGGTTAGAAGGCAGAGGCACTaGGCAGCTCCTCTTCAGCAGAGGCCCAGAGACTGTCACACAGCT +
Preference number: 1 (lower is better)
Translates to: LSELIHLPMVRRQRH*AAPLQQRPRDCHTA
Trigger: AGCTGTGTGACAGTCTCTGGGCCTCTGCTGAAGAGGAGCTGCTCAGTGCCTCTGCCTTCTAACCATGGGGAGGTGGATGAGCTCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp GTGGGCAGCAGAGGTGCAAATGGCCAGAACACCAACTTCGCATGTTaGGCCACTCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTTGT +
Preference number: 1 (lower is better)
Translates to: VGSRGANGQNTNFAC*ATPLCGKALDRPLC
Trigger: ACAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGAGTGGCTCAACATGCGAAGTTGGTGTTCTGGCCATTTGCACCTCTGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp TTAGAGCCACTTCCCTGGGACTGTCTGAGCTCATCCACCTCCCCATaGTTAGAAGGCAGAGGCACTGAGCAGCTCCTCTTCAGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: LEPLPWDCLSSSTSP*LEGRGTEQLLFSRG
Trigger: GCCTCTGCTGAAGAGGAGCTGCTCAGTGCCTCTGCCTTCTAACCATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAAGTGGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp CTGGCACGGTTGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCATaGCTTTCTTGGAAGGCAGAAGTGTTAGAGCCACTTCCCTGGGAC +
Preference number: 1 (lower is better)
Translates to: LARLYAIPRSEVAPS*LSWKAEVLEPLPWD
Trigger: GTCCCAGGGAAGTGGCTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp AAGGACATGCTTGCACGGACATACCTCCACAGAGAGCCATCTGTGTaGACCCGCATGGCAGAGGCCGTGATGTCGGTGGTGATGGCAAAG +
Preference number: 1 (lower is better)
Translates to: KDMLARTYLHREPSV*TRMAEAVMSVVMAK
Trigger: CTTTGCCATCACCACCGACATCACGGCCTCTGCCATGCGGGTTCACACAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAGCATGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp CATCCTTGGGGTCGCAGAGTGGGGGCATATAGCCTGACAAGGACATaGTTGCACGGACATACCTCCACAGAGAGCCATCTGTGTGAACCC +
Preference number: 1 (lower is better)
Translates to: HPWGRRVGAYSLTRT*LHGHTSTESHLCEP
Trigger: GGGTTCACACAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAGCATGTCCTTGTCAGGCTATATGCCCCCACTCTGCGACCCCAAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GGTCTGGTGGTCGTTGGAAAACACGTGTGTACATCTCGACCAGCTTaGGCAAGCTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: GLVVVGKHVCTSRPA*ASFSWRRHGVGSRG
Trigger: ACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GGAGCCAAGGGAAGGAGTCCTGGGACTGTTCTGGGGAAGTCAAGCTaGGGGGTCCTTGCAACATCGAAGGCTCATATTCCGAGTCAGAGT +
Preference number: 1 (lower is better)
Translates to: GAKGRSPGTVLGKSS*GVLATSKAHIPSQS
Trigger: ACTCTGACTCGGAATATGAGCCTTCGATGTTGCAAGGACCCCCCAGCTTGACTTCCCCAGAACAGTCCCAGGACTCCTTCCCTTGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR GCA 90 bp GACCAGAGTTTCAGGGTATTTCTCAAACACTCCTTGAAAAGCTGCTaGAGGAAGCCAGAGCACGGTGGACGAGACAGCGGCACGGGCAGA +
Preference number: 1 (lower is better)
Translates to: DQSFRVFLKHSLKSC*RKPEHGGRDSGTGR
Trigger: TCTGCCCGTGCCGCTGTCTCGTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAAACTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp GTCTGTCTCGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTaGCCCCATGGATCTTGCCACATCCGCTGGGAGGTTGTTGATGTA +
Preference number: 1 (lower is better)
Translates to: VCLVPAANIDGNHNL*PHGSCHIRWEVVDV
Trigger: TACATCAACAACCTCCCAGCGGATGTGGCAAGATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GGGACCTCTCAAGCTGCTCCTCTGGACCATATGACATCTGTCTCTTaGCTCGTCCAGCCACACTTGCTACTGACAAGAGAGGGATGGCCT +
Preference number: 1 (lower is better)
Translates to: GTSQAAPLDHMTSVS*LVQPHLLLTREGWP
Trigger: AGGCCATCCCTCTCTTGTCAGTAGCAAGTGTGGCTGGACGAGCCAAGAGACAGATGTCATATGGTCCAGAGGAGCAGCTTGAGAGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp TTGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCATGGCTTTCTTaGAAGGCAGAAGTGTTAGAGCCACTTCCCTGGGACTGTCTGAGC +
Preference number: 1 (lower is better)
Translates to: LYAIPRSEVAPSWLS*KAEVLEPLPWDCLS
Trigger: GCTCAGACAGTCCCAGGGAAGTGGCTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp CATCTCGACCAGCTTGGGCAAGCTTCTCTTGGAGAAGACACGGCGTaGGCAGCAGAGGTGCAAATGGCCAGAACACCAACTTCGCATGTT +
Preference number: 1 (lower is better)
Translates to: HLDQLGQASLGEDTA*AAEVQMARTPTSHV
Trigger: AACATGCGAAGTTGGTGTTCTGGCCATTTGCACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GGAAAACACGTGTGTACATCTCGACCAGCTTGGGCAAGCTTCTCTTaGAGAAGACACGGCGTGGGCAGCAGAGGTGCAAATGGCCAGAAC +
Preference number: 1 (lower is better)
Translates to: GKHVCTSRPAWASFS*RRHGVGSRGANGQN
Trigger: GTTCTGGCCATTTGCACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCGAGATGTACACACGTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GCCTGTCAGCATCCGTGCCAGGCGGGAAAAATCAGAATGACGGTCTaGTGGTCGTTGGAAAACACGTGTGTACATCTCGACCAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: ACQHPCQAGKIRMTV*WSLENTCVHLDQLG
Trigger: CCCAAGCTGGTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATGCTGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp CCCTCATGGCTTTCTTGGAAGGCAGAAGTGTTAGAGCCACTTCCCTaGGACTGTCTGAGCTCATCCACCTCCCCATGGTTAGAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: PSWLSWKAEVLEPLP*DCLSSSTSPWLEGR
Trigger: TCTGCCTTCTAACCATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAAGTGGCTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp TGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAAATCCTaGCACGGTTGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCAT +
Preference number: 1 (lower is better)
Translates to: WPKSSQVAHQSVAKS*HGCMPSPGLRWLPH
Trigger: ATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp TGCACAACCCTGACCAGAGTTTCAGGGTATTTCTCAAACACTCCTTaGAAAGCTGCTGCAGGAAGCCAGAGCACGGTGGACGAGACAGCG +
Preference number: 1 (lower is better)
Translates to: CTTLTRVSGYFSNTP*KAAAGSQSTVDETA
Trigger: CGCTGTCTCGTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAAACTCTGGTCAGGGTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp AGAGTGTGGCAAAATCCTGGCACGGTTGTATGCCATCCCCAGGTCTaGGGTGGCTCCCTCATGGCTTTCTTGGAAGGCAGAAGTGTTAGA +
Preference number: 1 (lower is better)
Translates to: RVWQNPGTVVCHPQV*GGSLMAFLEGRSVR
Trigger: TCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTGCCACACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp CAACTGTGTGTGCCACGCCCAGGACAACATCCGGCCGTTTCCTCATaGTCTCATAGAAGTGGGCCTTCGAGATGGACAAAAAGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: QLCVPRPGQHPAVSS*SHRSGPSRWTKSCS
Trigger: ACTGCAGCTTTTTGTCCATCTCGAAGGCCCACTTCTATGAGATCATGAGGAAACGGCCGGATGTTGTCCTGGGCGTGGCACACACAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp CTGTCCGCCCATGTTGATACCCAACTTCACAGATCTCATCAAATTTaGCGAAGTCCAGGGTGCGGTAACTGTCGATGGGAGGCCTCAGGT +
Preference number: 1 (lower is better)
Translates to: LSAHVDTQLHRSHQI*RSPGCGNCRWEASG
Trigger: ACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATGAGATCTGTGAAGTTGGGTATCAACATGGGCGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp TGTCAGCATCCGTGCCAGGCGGGAAAAATCAGAATGACGGTCTGGTaGTCGTTGGAAAACACGTGTGTACATCTCGACCAGCTTGGGCAA +
Preference number: 1 (lower is better)
Translates to: CQHPCQAGKIRMTVW*SLENTCVHLDQLGQ
Trigger: TTGCCCAAGCTGGTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATGCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp GATACCCAACTTCACAGATCTCATCAAATTTGCCGAAGTCCAGGGTaGGGTAACTGTCGATGGGAGGCCTCAGGTACTCACAGTAGTCGC +
Preference number: 1 (lower is better)
Translates to: DTQLHRSHQICRSPG*GNCRWEASGTHSSR
Trigger: GCGACTACTGTGAGTACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATGAGATCTGTGAAGTTGGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp GCTCAATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTGGGGATaGCTGGCAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCAT +
Preference number: 1 (lower is better)
Translates to: AQSQCSGSQHTFPWG*LAVPPHTRSDSQTH
Trigger: ATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR CCA 90 bp AGTCTAGCTCAATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTaGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCTGATAGTCAG +
Preference number: 1 (lower is better)
Translates to: SLAQSQCSGSQHTFP*GWLAVPPHTRSDSQ
Trigger: CTGACTATCAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTGAGCTAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR CCA 90 bp AATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTGGGGATGGCTaGCAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCATCCTG +
Preference number: 1 (lower is better)
Translates to: NPSALEVSIRFLGDG*QFLLILGLIVRLIL
Trigger: CAGGATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
3UTR TCA 90 bp CATGGATGTGATTGGGTAGGTCAGGTCCAGTATAGTCTTCATCATTaGTGTCATACCCTCTGCCCACTGCTTGGCCCGGATCCGTGTTTG +
Preference number: 1 (lower is better)
Translates to: HGCDWVGQVQYSLHH*CHTLCPLLGPDPCL
Trigger: CAAACACGGATCCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGACTATACTGGACCTGACCTACCCAATCACATCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp AGGACACCACTCCGGACCCAGATGTCAAACACTGTCCGCCCATGTTaGTACCCAACTTCACAGATCTCATCAAATTTGCCGAAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: RTPLRTQMSNTVRPC*YPTSQISSNLPKSR
Trigger: CCTGGACTTCGGCAAATTTGATGAGATCTGTGAAGTTGGGTATCAACATGGGCGGACAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp AATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTGGGGATGGCTaGCAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCATCATC +
Preference number: 1 (lower is better)
Translates to: NPSALEVSIRFLGDG*QFLLILGLIVRLII
Trigger: GATGATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp GCACGTCCAGCCTCTACTTCCATCCAGTCTAGAGCAAAATCAATCTaGCGTACAAAGGATGACATCCTCTTCACAACTGTGTGTGCCACG +
Preference number: 1 (lower is better)
Translates to: ARPASTSIQSRAKSI*RTKDDILFTTVCAT
Trigger: CGTGGCACACACAGTTGTGAAGAGGATGTCATCCTTTGTACGGCAGATTGATTTTGCTCTAGACTGGATGGAAGTAGAGGCTGGACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp ACAGGGCAACAGACACAGCACAGGGGACAAGAAGGAGAACATGGATaGATATACCTTGCTGGCCAAAGAGTTCCCAAGTTGCTCATCAGA +
Preference number: 1 (lower is better)
Translates to: TGQQTQHRGQEGEHG*IYLAGQRVPKLLIR
Trigger: TCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCCCTGTGCTGTGTCTGTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 90 bp CAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTaGTCTTGTCAGGCAACTGAAGTAGCCTCTAAGGAATGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: QPMSLEEARWLYHPV*SCQATEVASKEWVQ
Trigger: CTGCACCCATTCCTTAGAGGCTACTTCAGTTGCCTGACAAGATCAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
3UTR GCA 90 bp GAGAACATGGATGGATATACCTTGCTGGCCAAAGAGTTCCCAAGTTaGTCATCAGAGTGTGGCAAAATCCTGGCACGGTTGTATGCCATC +
Preference number: 1 (lower is better)
Translates to: ENMDGYTLLAKEFPS*SSECGKILARLYAI
Trigger: GATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 90 bp GACACAGCACAGGGGACAAGAAGGAGAACATGGATGGATATACCTTaGTGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAAA +
Preference number: 1 (lower is better)
Translates to: DTAQGTRRRTWMDIP*WPKSSQVAHQSVAK
Trigger: TTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCCCTGTGCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 90 bp ACAGCACAGGGGACAAGAAGGAGAACATGGATGGATATACCTTGCTaGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAAATCC +
Preference number: 1 (lower is better)
Translates to: TAQGTRRRTWMDIPC*PKSSQVAHQSVAKS
Trigger: GGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCCCTGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTGCCATCCCCAGGTCTaGGGTGGCTCCCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHCHPQV*GGSLMA
Trigger: AGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp CTTCGCATGTTGAGCCACTCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTTGGAGTCCCGGACAGCATaGACTGTGGTTGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LRMLSHSTVREGTGPSSLESRTA*TVVALA
Trigger: GGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTC...CAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGAGTGGCTCAACATGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTGCCGAAGTCCAGGGTaGGGTAACTGTCGATGGGAG +
Preference number: 2 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHCRSPG*GNCRWE
Trigger: CTCCCATCGACAGTTACCGCACCCTGGACTTCGGCA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp CCTCTAGCTCCACCCCCTCCAAGCACCAAGGCAATGGCATTGCCTGTCAGCATCTGGATGTCCTCCTGCTaGCCCAGCCAACTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: PLAPPPPSTKAMALPVSIWMSSC*PSQLES
Trigger: GCTCTCCAGTTGGCTGGGCCAGCAGGAGGACATCCA...GATGCTGACAGGCAATGCCATTGCCTTGGTGCTTGGAGGGGGTGGAGCTAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCTGGGCAAGCTTCTCTTaGAGAAGACACGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSWASFS*RRHGVG
Trigger: GCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCA...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp ACAACCTGTGGGTACCTGCGCTTGATAGACGTCAGAGCTCCTGCTGGCAGCTTAAGGGTGCCGGGGAAGTaGAGAGGCCCACGACTCCAA +
Preference number: 2 (lower is better)
Translates to: TTCGYLRLIDVRAPAGSLRVPGK*RGPRLQ
Trigger: TTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCT...TAAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACAGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp CCTCTAGCTCCACCCCCTCCAAGCACCAAGGCAATGGCATTGCCTGTCAGCATCCCTACTGCTGGCTCTTaGTCACCCAAGCCCACGATG +
Preference number: 2 (lower is better)
Translates to: PLAPPPPSTKAMALPVSIPTAGS*SPKPTM
Trigger: CATCGTGGGCTTGGGTGAGCAAGAGCCAGCAGTAGG...GATGCTGACAGGCAATGCCATTGCCTTGGTGCTTGGAGGGGGTGGAGCTAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCACAGTCCTTCCTCTTaGTTGTCCCCTGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSHSPSS*LSPAGP
Trigger: AGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp CGACCAGCTTGGGCAAGCTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAGGTCTGAGTAGTGGAAGATaGCAGAGGGGGTCTCTGCGA +
Preference number: 2 (lower is better)
Translates to: RPAWASFSWRRHGVGSRGLSSGR*QRGSLR
Trigger: TCGCAGAGACCCCCTCTGCCATCTTCCACTACTCAG...ACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp CGGTCTGGTGGTCGTTGGAAAACACGTGTGTACATCTCGACCAGCTaGGGCAAGCTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RSGGRWKTRVYISTS*GKLLLEKTRRGQQR
Trigger: CCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp ACAACCTGTGGGTACCTGCGCTTGATAGACGTCAGAGCTCCTGCTGGCAGCTTAGCTGCTCCCATGATCTaGGCTGCTGAACTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: TTCGYLRLIDVRAPAGSLAAPMI*AAELRG
Trigger: CCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGC...TAAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACAGGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACAGAAGTGCATCTCCATaGCCTACTGCTGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHRSASP*PTADAG
Trigger: CCCAGCATCAGCAGTAGGTCATGGAGATGCACTTCT...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp GGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATGTCAAACACTGACTCTGCTAGTGCCCTaGGGATGCCCACCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: GPATSSLGHHSGPRCQTLTLLVP*GCPPGH
Trigger: GTGCCCAGGTGGGCATCCTCAGGGCACTAGCAGAGT...CAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp CCATCCCCAGGTCTGAGGTGGCTCCCTCATGGCTTTCTTGGAAGGCAGAAGTGTAATCCCACCTTCCCATaGCTCACAGAGGCGTCCGTG +
Preference number: 2 (lower is better)
Translates to: PSPGLRWLPHGFLGRQKCNPTFP*LTEASV
Trigger: CACGGACGCCTCTGTGAGGCATGGGAAGGTGGGATT...ACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp ACAACCTGTGGGTACCTGCGCTTGATAGACGTCAGAGCTCCTGCTGGCAGCTTACTGGGGATGTCAGCCTaGGCCACACCCACAGCACTA +
Preference number: 2 (lower is better)
Translates to: TTCGYLRLIDVRAPAGSLLGMSA*ATPTAL
Trigger: TAGTGCTGTGGGTGTGGCCCAGGCTGACATCCCCAG...TAAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACAGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp CGGTACTCATGGATGCTGTCTAGAGCAGCGGAACCCAGGCGTTGTTaGATGTTGTCACTGGTCAGCAGCAGGACAGGACCGATGGCACTG +
Preference number: 2 (lower is better)
Translates to: RYSWMLSRAAEPRRC*MLSLVSSRTGPMAL
Trigger: CAGTGCCATCGGTCCTGTCCTGCTGCTGACCAGTGACAACATCAAACAACGCCTGGGTTCCGCTGCTCTAGACAGCATCCATGAGTACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp GAGCAAAGGCGGTTAGGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTGGTTAAATCCAAGCTGGTaGCCTGTTGCAGATCCCTGC +
Preference number: 2 (lower is better)
Translates to: EQRRLGAHPQKQAVLPLWLNPSW*PVADPC
Trigger: GCAGGGATCTGCAACAGGTCACCAGCTTGGATTTAA...CCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp TCTTCAGCAGAGGCCCAGAGACTGTCACACAGCTGCTCCCATGATCTGAGCTGCAAGAGAGGGATGGCCTaGCTCTCAGGGTTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SSAEAQRLSHSCSHDLSCKRGMA*LSGLKS
Trigger: GCTCTTCAACCCTGAGAGCCAGGCCATCCCTCTCTT...GCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCTCTGGGCCTCTGCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp AGGGACCTCTCAAGCTGCTCCTCTGGACCATATGACATCTGTCTCTaGGCTCGTCCAGCCACACTTGCTACTGACAAGAGAGGGATGGCC +
Preference number: 2 (lower is better)
Translates to: RDLSSCSSGPYDICL*ARPATLATDKRGMA
Trigger: GGCCATCCCTCTCTTGTCAGTAGCAAGTGTGGCTGGACGAGCCAAGAGACAGATGTCATATGGTCCAGAGGAGCAGCTTGAGAGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp GGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATGTCAAACACTGTTCCCTGGGACTGTCTaGGCTCATCCACCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: GPATSSLGHHSGPRCQTLFPGTV*AHPPPH
Trigger: ATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAA...CAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp GAGCAAAGGCGGTTAGGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTGGCCCCAGTCTCATCCCTaGAATTTTCTGAGTAGTGGA +
Preference number: 2 (lower is better)
Translates to: EQRRLGAHPQKQAVLPLWPQSHP*NFLSSG
Trigger: TCCACTACTCAGAAAATTTCAGGGATGAGACTGGGG...CCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp CTTCGCATGTTGAGCCACTCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTTGGTTGCAGATCCCTGCTaGAGACTGCCTAAGATCTTC +
Preference number: 2 (lower is better)
Translates to: LRMLSHSTVREGTGPSSLVADPC*RLPKIF
Trigger: GAAGATCTTAGGCAGTCTCCAGCAGGGATCTGCAAC...CAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGAGTGGCTCAACATGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp ATAGTCTTCATCATTGATGTCATACCCTCTGCCCACTGCTTGGCCCGGATCCGTGCTGGCCCAGCCAACTaGAGAGCCGGTACTCATGGA +
Preference number: 2 (lower is better)
Translates to: IVFIIDVIPSAHCLARIRAGPAN*RAGTHG
Trigger: TCCATGAGTACCGGCTCTCCAGTTGGCTGGGCCAGC...ACGGATCCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp GAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAAATCCTGGCACGGTaGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCATGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: EFPSCSSECGKILAR*YAIPRSEVAPSWLS
Trigger: AGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp CTGCACAACCCTGACCAGAGTTTCAGGGTATTTCTCAAACACTCCTaGAAAAGCTGCTGCAGGAAGCCAGAGCACGGTGGACGAGACAGC +
Preference number: 2 (lower is better)
Translates to: LHNPDQSFRVFLKHS*KSCCRKPEHGGRDS
Trigger: GCTGTCTCGTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAAACTCTGGTCAGGGTTGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp CATCCGTGCCAGGCGGGAAAAATCAGAATGACGGTCTGGTGGTCGTaGGAAAACACGTGTGTACATCTCGACCAGCTTGGGCAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: HPCQAGKIRMTVWWS*ENTCVHLDQLGQAS
Trigger: AGAAGCTTGCCCAAGCTGGTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp TTTATCCAGTCAGGAAGGATGTTCCAGTCTTGGCCCCTGGTCATCTaGATTAGGGAGCCAAGGGAAGGAGTCCTGGGACTGTTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: FIQSGRMFQSWPLVI*IREPREGVLGLFWG
Trigger: TCCCCAGAACAGTCCCAGGACTCCTTCCCTTGGCTCCCTAATCAAGATGACCAGGGGCCAAGACTGGAACATCCTTCCTGACTGGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp CATCAAATTTGCCGAAGTCCAGGGTGCGGTAACTGTCGATGGGAGGCCTCAGGTAGTGGGCCTTCGAGATaGACAAAAAGCTGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: HQICRSPGCGNCRWEASGSGPSR*TKSCSL
Trigger: GAGACTGCAGCTTTTTGTCCATCTCGAAGGCCCACT...ACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR GCA 90 bp ATCTCGACCAGCTTGGGCAAGCTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAAAGAGTTCCCAAGTTaGTCATCAGAGTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: ISTSLGKLLLEKTRRGQQKEFPS*SSECGK
Trigger: TTTGCCACACTCTGATGAGCAACTTGGGAACTCTTT...CTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CGTCTCCACCACACCAACAAGGTCTCCTCGGCCATATTCCCCTGCCAGGCGTTTCCACAAACAAAATATTaGCATCCTGATCTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: RLHHTNKVSSAIFPCQAFPQTKY*HPDLPV
Trigger: AACAGGGAGATCAGGATGTCAATATTTTGTTTGTGG...AAACGCCTGGCAGGGGAATATGGCCGAGGAGACCTTGTTGGTGTGGTGGAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp ATAGTCTTCATCATTGATGTCATACCCTCTGCCCACTGCTTGGCCCGGATCCGTCACAGCCCATGTCTCTaGAAGAAGCCAGATGGCTAT +
Preference number: 2 (lower is better)
Translates to: IVFIIDVIPSAHCLARIRHSPCL*KKPDGY
Trigger: ATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTG...ACGGATCCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CATCAAATTTGCCGAAGTCCAGGGTGCGGTAACTGTCGATGGGAGGCCTCAGGTTATAGTCTTCATCATTaGTGTCATACCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: HQICRSPGCGNCRWEASGYSLHH*CHTLCP
Trigger: TGGGCAGAGGGTATGACATCAATGATGAAGACTATA...ACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp GGAGAACATGGATGGATATACCTTGCTGGCCAAAGAGTTCCCAAGTaGCTCATCAGAGTGTGGCAAAATCCTGGCACGGTTGTATGCCAT +
Preference number: 2 (lower is better)
Translates to: GEHGWIYLAGQRVPK*LIRVWQNPGTVVCH
Trigger: ATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp AGACACAGCACAGGGGACAAGAAGGAGAACATGGATGGATATACCTaGCTGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: RHSTGDKKENMDGYT*LAKEFPSCSSECGK
Trigger: TTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCCCTGTGCTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CCTCTACTTCCATCCAGTCTAGAGCAAAATCAATCTGCCGTACAAAGGATGACATCTCCCCGGGATGTGTaGGGAACAGGCAAGTATCCT +
Preference number: 2 (lower is better)
Translates to: PLLPSSLEQNQSAVQRMTSPRDV*GTGKYP
Trigger: AGGATACTTGCCTGTTCCTCACACATCCCGGGGAGA...TGTCATCCTTTGTACGGCAGATTGATTTTGCTCTAGACTGGATGGAAGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTACACAGCCCATGTCTCTaGAAGAAGCCAGATGGCTAT +
Preference number: 2 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLHSPCL*KKPDGY
Trigger: ATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTG...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
3UTR-3UTR CCA 90 bp GGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATGTCAAACACTGATGGATATACCTTGCTaGCCAAAGAGTTCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: GPATSSLGHHSGPRCQTLMDIPC*PKSSQV
Trigger: AACTTGGGAACTCTTTGGCCAGCAAGGTATATCCAT...CAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 90 bp GGGATGTGTGAGGAACAGGCAAGTATCCTCCAAGCTGTCAATCTTTaGCTGGTACACATGCAGCATCCCCGAGACCACAAACAAAATATT +
Preference number: 2 (lower is better)
Translates to: GMCEEQASILQAVNL*LVHMQHPRDHKQNI
Trigger: AATATTTTGTTTGTGGTCTCGGGGATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTGGAGGATACTTGCCTGTTCCTCACACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR TCA 90 bp CCTCTACTTCCATCCAGTCTAGAGCAAAATCAATCTGCCGTACAAAGGATGACATTCTCAAACACTCCTTaGAAAGCTGCTGCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PLLPSSLEQNQSAVQRMTFSNTP*KAAAGS
Trigger: GCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAA...TGTCATCCTTTGTACGGCAGATTGATTTTGCTCTAGACTGGATGGAAGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp ACGCCACACTCTGCTAGTGCCCTGAGGATGCCCACCTaGGCACACCCTCTAGCTCCACCCCCTCCAAGCACC +
Preference number: 3 (lower is better)
Translates to: TPHSASALRMPT*AHPLAPPPPST
Trigger: GGTGCTTGGAGGGGGTGGAGCTAGAGGGTGTGCCCAGGTGGGCATCCTCAGGGCACTAGCAGAGTGTGGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CACCTACTGCTGGCTCTTGCTCACCCAAGCCCACGATaGGGATGCAGTCAGCCTGCCGGATGCAGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: HLLLALAHPSPR*GCSQPAGCSAG
Trigger: CCCAGCGCTGCATCCGGCAGGCTGACTGCATCCTCATCGTGGGCTTGGGTGAGCAAGAGCCAGCAGTAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp GCCTCACAGAGGCGTCCGTGCTCCTCAGTACTGCTGTaGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: ASQRRPCSSVLL*GYKGAGEVKRP
Trigger: GGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAGCACGGACGCCTCTGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
3UTR TCA 72 bp AGTCAGCCTGCCGGATGCAGCGCTGGGTCCACGGTGTaGGTGTGCCGTCTGCCTGATACAGCACAATCCGGT +
Preference number: 3 (lower is better)
Translates to: SQPAGCSAGSTV*VCRLPDTAQSG
Trigger: ACCGGATTGTGCTGTATCAGGCAGACGGCACACTCACACCGTGGACCCAGCGCTGCATCCGGCAGGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GCTGGCAGCTTAGCCAGTTCTGAGTCCCGGACAGCATaGACTGTGGTTGCTCTGGCCTGGTGGGTCAGCGTC +
Preference number: 3 (lower is better)
Translates to: AGSLASSESRTA*TVVALAWWVSV
Trigger: GACGCTGACCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTCAGAACTGGCTAAGCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp TCTCGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTGCCCCCATGGATCCCCTCTGCCCACTGCTaGGCCCGGATCCGTGTTTGG +
Preference number: 3 (lower is better)
Translates to: SRPGCQHRWQSQPLPPWIPSAHC*ARIRVW
Trigger: CCAAACACGGATCCGGGCCAAGCAGTGGGCAGAGGG...GATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp AGCAGAGGCCCAGAGACTGTCACACAGCTGCTCCCATaGTCTGAGCTGCTGAACTCCGAGGGCCGTAGGGAC +
Preference number: 3 (lower is better)
Translates to: SRGPETVTQLLP*SELLNSEGRRD
Trigger: GTCCCTACGGCCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCTCTGGGCCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GATGCAGCGCTGGGTCCACGGTGTGAGTGTGCCGTCTaGCTGATACAGCACAATCCGGTGGATGTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: DAALGPRCECAV*LIQHNPVDVLL
Trigger: CAGGAGGACATCCACCGGATTGTGCTGTATCAGGCAGACGGCACACTCACACCGTGGACCCAGCGCTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp GGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTaGACAGATTGCCAGGCGGGTTCCCCAAGTCCCATT +
Preference number: 3 (lower is better)
Translates to: GAHPQKQAVLPL*TDCQAGSPSPI
Trigger: AATGGGACTTGGGGAACCCGCCTGGCAATCTGTCCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp AGCAGCAGGACAGGACCGATGGCACTGAGGGCATGTTaGAGCTCCAGAGCAAAGGCGGTTAGGGGCACATCC +
Preference number: 3 (lower is better)
Translates to: SSRTGPMALRAC*SSRAKAVRGTS
Trigger: GGATGTGCCCCTAACCGCCTTTGCTCTGGAGCTCCAACATGCCCTCAGTGCCATCGGTCCTGTCCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TCCTGCTGGCCCAGCCAACTGGAGAGCCGGTACTCATaGATGCTGTCTAGAGCAGCGGAACCCAGGCGTTGT +
Preference number: 3 (lower is better)
Translates to: SCWPSQLESRYS*MLSRAAEPRRC
Trigger: ACAACGCCTGGGTTCCGCTGCTCTAGACAGCATCCATGAGTACCGGCTCTCCAGTTGGCTGGGCCAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CTTGCACGGACATACCTCCACAGAGAGCCATCTGTGTaGACCCGCATGGCAGAGGCCGTGATGTCGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LARTYLHREPSV*TRMAEAVMSVV
Trigger: CACCACCGACATCACGGCCTCTGCCATGCGGGTTCACACAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp GCAGCCACCATCCAGACAAGGCATCGCCATAGTTGGTaGGGTCTGTCTCGTCCCGGCTGCCAACATCGATGG +
Preference number: 3 (lower is better)
Translates to: AATIQTRHRHSW*GLSRPGCQHRW
Trigger: CCATCGATGTTGGCAGCCGGGACGAGACAGACCTCACCAACTATGGCGATGCCTTGTCTGGATGGTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp GTTCTGAGTCCCGGACAGCATGCACTGTGGTTGCTCTaGCCTGGTGGGTCAGCGTCTCCACCACACCAACAA +
Preference number: 3 (lower is better)
Translates to: VLSPGQHALWLL*PGGSASPPHQQ
Trigger: TTGTTGGTGTGGTGGAGACGCTGACCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp CGACCAGCTTGGGCAAGCTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAGGTTGTGGGTACCTGCGCTaGATAGACGTCAGAGCTCCT +
Preference number: 3 (lower is better)
Translates to: RPAWASFSWRRHGVGSRGCGYLR*IDVRAP
Trigger: AGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACA...ACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp CATCAAATTTGCCGAAGTCCAGGGTGCGGTAACTGTCGATGGGAGGCCTCAGGTTTGCCCCCATGGATCTaGCCACATCCGCTGGGAGGT +
Preference number: 3 (lower is better)
Translates to: HQICRSPGCGNCRWEASGLPPWI*PHPLGG
Trigger: ACCTCCCAGCGGATGTGGCAAGATCCATGGGGGCAA...ACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp AGACTGTCACACAGCTGCTCCCATGATCTGAGCTGCTaGACTCCGAGGGCCGTAGGGACCTCTCAAGCTGCT +
Preference number: 3 (lower is better)
Translates to: RLSHSCSHDLSC*TPRAVGTSQAA
Trigger: AGCAGCTTGAGAGGTCCCTACGGCCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp TCCGTGCTCCTCAGTACTGCTGTGGGGATACAAGGGTaGCGGGGAAGTGAAGAGGCCCACGACTCCAATAAC +
Preference number: 3 (lower is better)
Translates to: SVLLSTAVGIQG*RGSEEAHDSNN
Trigger: GTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAGCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
3UTR GCA 72 bp TCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTTGTaGAGCAAGATTAGCTGCTTCTGGGCACGCACAGCT +
Preference number: 3 (lower is better)
Translates to: STVREGTGPSSL*SKISCFWARTA
Trigger: AGCTGTGCGTGCCCAGAAGCAGCTAATCTTGCTGCACAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTaGCCCCATGGATCTTGCCACATCCGCTGGGAGGTT +
Preference number: 3 (lower is better)
Translates to: VPAANIDGNHNL*PHGSCHIRWEV
Trigger: AACCTCCCAGCGGATGTGGCAAGATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp GGATGCTGTCTAGAGCAGCGGAACCCAGGCGTTGTTTaGTGTTGTCACTGGTCAGCAGCAGGACAGGACCGA +
Preference number: 3 (lower is better)
Translates to: GCCLEQRNPGVV*CCHWSAAGQDR
Trigger: TCGGTCCTGTCCTGCTGCTGACCAGTGACAACATCAAACAACGCCTGGGTTCCGCTGCTCTAGACAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp GGCTGTAGCTCCGCTCCTCAGCAAACAGAGCACCCATaGAAGCCCCGATGGATGTGCCTCCGATTATGTCCA +
Preference number: 3 (lower is better)
Translates to: GCSSAPQQTEHP*KPRWMCLRLCP
Trigger: TGGACATAATCGGAGGCACATCCATCGGGGCTTTCATGGGTGCTCTGTTTGCTGAGGAGCGGAGCTACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GGCACTGGACCGTCCTCTTTGTGCAGCAAGATTAGCTaGTTCTGGGCACGCACAGCTGTGCTCTCCAACATC +
Preference number: 3 (lower is better)
Translates to: GTGPSSLCSKIS*FWARTAVLSNI
Trigger: GATGTTGGAGAGCACAGCTGTGCGTGCCCAGAAGCAGCTAATCTTGCTGCACAAAGAGGACGGTCCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GGTCGCAGAGTGGGGGCATATAGCCTGACAAGGACATaGTTGCACGGACATACCTCCACAGAGAGCCATCTG +
Preference number: 3 (lower is better)
Translates to: GRRVGAYSLTRT*LHGHTSTESHL
Trigger: CAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAGCATGTCCTTGTCAGGCTATATGCCCCCACTCTGCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CTCCTTGAAAAGCTGCTGCAGGAAGCCAGAGCACGGTaGACGAGACAGCGGCACGGGCAGAAACTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: LLEKLLQEARAR*TRQRHGQKLFC
Trigger: ACAAAACAGTTTCTGCCCGTGCCGCTGTCTCGTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp ATCCCCAGGTCTGAGGTGGCTCCCTCATGGCTTTCTTaGAAGGCAGAAGTGTTAGAGCCACTTCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: IPRSEVAPSWLS*KAEVLEPLPWD
Trigger: GTCCCAGGGAAGTGGCTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TCCTGGCACGGTTGTATGCCATCCCCAGGTCTGAGGTaGCTCCCTCATGGCTTTCTTGGAAGGCAGAAGTGT +
Preference number: 3 (lower is better)
Translates to: SWHGCMPSPGLR*LPHGFLGRQKC
Trigger: ACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CAGCTTGGGCAAGCTTCTCTTGGAGAAGACACGGCGTaGGCAGCAGAGGTGCAAATGGCCAGAACACCAACT +
Preference number: 3 (lower is better)
Translates to: QLGQASLGEDTA*AAEVQMARTPT
Trigger: AGTTGGTGTTCTGGCCATTTGCACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp AACACCCCACAGTCCTTCCTCTTGCTTGTCCCCTGCTaGTCCTGCAACATCTTCTCTAGGACACCACTCCGG +
Preference number: 3 (lower is better)
Translates to: NTPQSFLLLVPC*SCNIFSRTPLR
Trigger: CCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTGGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp GGAAGGAGTCCTGGGACTGTTCTGGGGAAGTCAAGCTaGGGGGTCCTTGCAACATCGAAGGCTCATATTCCG +
Preference number: 3 (lower is better)
Translates to: GRSPGTVLGKSS*GVLATSKAHIP
Trigger: CGGAATATGAGCCTTCGATGTTGCAAGGACCCCCCAGCTTGACTTCCCCAGAACAGTCCCAGGACTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR-3UTR CAA 90 bp GGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATGTCAAACACTGGCCTGGCTCTCAGGGTaGAAGAGCTCTGTAGTCAGC +
Preference number: 3 (lower is better)
Translates to: GPATSSLGHHSGPRCQTLAWLSG*KSSVVS
Trigger: GCTGACTACAGAGCTCTTCAACCCTGAGAGCCAGGC...CAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp GGTCCTGCAACATCTTCTCTAGGACACCACTCCGGACCCAGATGTCAAACACTGACCAAGGCAATGGCATaGCCTGTCAGCATCCGTGCC +
Preference number: 3 (lower is better)
Translates to: GPATSSLGHHSGPRCQTLTKAMA*PVSIRA
Trigger: GGCACGGATGCTGACAGGCAATGCCATTGCCTTGGT...CAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTGCAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CAAAATCCTGGCACGGTTGTATGCCATCCCCAGGTCTaGGGTGGCTCCCTCATGGCTTTCTTGGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: QNPGTVVCHPQV*GGSLMAFLEGR
Trigger: TCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp CTTCTCTTGGAGAAGACACGGCGTGGGCAGCAGAGGTaGAAATGGCCAGAACACCAACTTCGCATGTTGAGC +
Preference number: 3 (lower is better)
Translates to: LLLEKTRRGQQR*KWPEHQLRMLS
Trigger: GCTCAACATGCGAAGTTGGTGTTCTGGCCATTTGCACCTCTGCTGCCCACGCCGTGTCTTCTCCAAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp AAGCACCAAGGCAATGGCATTGCCTGTCAGCATCCGTaGCAGGCGGGAAAAATCAGAATGACGGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: KHQGNGIACQHP*QAGKIRMTVWW
Trigger: CCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATGCTGACAGGCAATGCCATTGCCTTGGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TCTTCATCATTGATGTCATACCCTCTGCCCACTGCTTaGCCCGGATCCGTGTTTGGCTGTAGCTCCGCTCCT +
Preference number: 3 (lower is better)
Translates to: SSSLMSYPLPTA*PGSVFGCSSAP
Trigger: AGGAGCGGAGCTACAGCCAAACACGGATCCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp GAGCAAAGGCGGTTAGGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTGGCAAGCTGTCAATCTTTaGCTGGTACACATGCAGCAT +
Preference number: 3 (lower is better)
Translates to: EQRRLGAHPQKQAVLPLWQAVNL*LVHMQH
Trigger: ATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTG...CCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp GAGCAAAGGCGGTTAGGGGCACATCCTCAGAAGCAGGCAGTGCTGCCACTGTGGTATGTGCAGTCAGACTaGTCTCCTTGCCTGTATATG +
Preference number: 3 (lower is better)
Translates to: EQRRLGAHPQKQAVLPLWYVQSD*SPCLYM
Trigger: CATATACAGGCAAGGAGACAAGTCTGACTGCACATA...CCACAGTGGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp GTGCCACGCCCAGGACAACATCCGGCCGTTTCCTCATaGTCTCATAGAAGTGGGCCTTCGAGATGGACAAAA +
Preference number: 3 (lower is better)
Translates to: VPRPGQHPAVSS*SHRSGPSRWTK
Trigger: TTTTGTCCATCTCGAAGGCCCACTTCTATGAGATCATGAGGAAACGGCCGGATGTTGTCCTGGGCGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CCTGTCAGCATCCGTGCCAGGCGGGAAAAATCAGAATaGCGGTCTGGTGGTCGTTGGAAAACACGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: PVSIRARREKSE*RSGGRWKTRVY
Trigger: GTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATGCTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp TTCAGGGTATTTCTCAAACACTCCTTGAAAAGCTGCTaGAGGAAGCCAGAGCACGGTGGACGAGACAGCGGC +
Preference number: 3 (lower is better)
Translates to: FRVFLKHSLKSC*RKPEHGGRDSG
Trigger: GCCGCTGTCTCGTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CAAATTTGCCGAAGTCCAGGGTGCGGTAACTGTCGATaGGAGGCCTCAGGTACTCACAGTAGTCGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: QICRSPGCGNCR*EASGTHSSRCS
Trigger: AGAACAGCGACTACTGTGAGTACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CAATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTaGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCT +
Preference number: 3 (lower is better)
Translates to: QSQCSGSQHTFP*GWLAVPPHTRS
Trigger: AGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR GCA 72 bp CAAGCTGGTGACCTGTTGCAGATCCCTGCTGGAGACTaGCTAAGATCTTCTCGCCCAAGAGATGAATCAGTC +
Preference number: 3 (lower is better)
Translates to: QAGDLLQIPAGD*LRSSRPRDESV
Trigger: GACTGATTCATCTCTTGGGCGAGAAGATCTTAGGCAGTCTCCAGCAGGGATCTGCAACAGGTCACCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp ATTGCCAGGCGGGTTCCCCAAGTCCCATTTGCTGCTTaGTGTGTTAAATCCAAGCTGGTGACCTGTTGCAGA +
Preference number: 3 (lower is better)
Translates to: IARRVPQVPFAA*CVKSKLVTCCR
Trigger: TCTGCAACAGGTCACCAGCTTGGATTTAACACAGCAAGCAGCAAATGGGACTTGGGGAACCCGCCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp CTTCACAGATCTCATCAAATTTGCCGAAGTCCAGGGTaGGGTAACTGTCGATGGGAGGCCTCAGGTACTCAC +
Preference number: 3 (lower is better)
Translates to: LHRSHQICRSPG*GNCRWEASGTH
Trigger: GTGAGTACCTGAGGCCTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATGAGATCTGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CAAGCTGCTCCTCTGGACCATATGACATCTGTCTCTTaGCTCGTCCAGCCACACTTGCTACTGACAAGAGAG +
Preference number: 3 (lower is better)
Translates to: QAAPLDHMTSVS*LVQPHLLLTRE
Trigger: CTCTCTTGTCAGTAGCAAGTGTGGCTGGACGAGCCAAGAGACAGATGTCATATGGTCCAGAGGAGCAGCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CTTTCTTGGAAGGCAGAAGTGTTAGAGCCACTTCCCTaGGACTGTCTGAGCTCATCCACCTCCCCATGGTTA +
Preference number: 3 (lower is better)
Translates to: LSWKAEVLEPLP*DCLSSSTSPWL
Trigger: TAACCATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAAGTGGCTCTAACACTTCTGCCTTCCAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TTGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCATaGCTTTCTTGGAAGGCAGAAGTGTTAGAGCCACTT +
Preference number: 3 (lower is better)
Translates to: LYAIPRSEVAPS*LSWKAEVLEPL
Trigger: AAGTGGCTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCATACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp CATCCGTGCCAGGCGGGAAAAATCAGAATGACGGTCTaGTGGTCGTTGGAAAACACGTGTGTACATCTCGAC +
Preference number: 3 (lower is better)
Translates to: HPCQAGKIRMTV*WSLENTCVHLD
Trigger: GTCGAGATGTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTTTCCCGCCTGGCACGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TCTGATAGTCAGACTCATCATCCACTGCAGCCACCTTaGCCGGCTCAATCCGTGACACAATCTCAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: SDSQTHHPLQPP*PAQSVTQSQQG
Trigger: ACCTTGCTGAGATTGTGTCACGGATTGAGCCGGCCAAGGTGGCTGCAGTGGATGATGAGTCTGACTATCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACATTTCTCAAACACTCCTaGAAAAGCTGCTGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITFLKHS*KSCCRK
Trigger: CTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAA...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp TCTCGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTGCCCCCATGGATCTTCCCCAAGTCCCATTaGCTGCTTGCTGTGTTAAAT +
Preference number: 3 (lower is better)
Translates to: SRPGCQHRWQSQPLPPWIFPKSH*LLAVLN
Trigger: ATTTAACACAGCAAGCAGCAAATGGGACTTGGGGAA...GATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp TCTCGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTGCCCCCATGGATCGCGACAACACTTTTCTaGGACTTGGAAAGAACAAAG +
Preference number: 3 (lower is better)
Translates to: SRPGCQHRWQSQPLPPWIATTLF*DLERTK
Trigger: CTTTGTTCTTTCCAAGTCCAAGAAAAGTGTTGTCGC...GATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CTGACCAGAGTTTCAGGGTATTTCTCAAACACTCCTTaGAAAGCTGCTGCAGGAAGCCAGAGCACGGTGGAC +
Preference number: 3 (lower is better)
Translates to: LTRVSGYFSNTP*KAAAGSQSTVD
Trigger: GTCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAAACTCTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp CAAAAGAGGTATGATGAGGAAAGAAGTGCATCTCCATaGCCTACTGCTGATGCTGGGGATGTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: QKRYDEERSASP*PTADAGDVSLG
Trigger: GCCCAGGCTGACATCCCCAGCATCAGCAGTAGGTCATGGAGATGCACTTCTTTCCTCATCATACCTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp GATTGGGTAGGTCAGGTCCAGTATAGTCTTCATCATTaGTGTCATACCCTCTGCCCACTGCTTGGCCCGGAT +
Preference number: 3 (lower is better)
Translates to: DWVGQVQYSLHH*CHTLCPLLGPD
Trigger: ATCCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGACTATACTGGACCTGACCTACCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GACGCAGCACACATAGGCCAGTCGAGTCTGAATCTCTaGCATGTTCAACACCTTGACTTTTGTAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: DAAHIGQSSLNL*HVQHLDFCSQG
Trigger: CCCTTGGCTACAAAAGTCAAGGTGTTGAACATGGCAGAGATTCAGACTCGACTGGCCTATGTGTGCTGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GCTCATATTCCGAGTCAGAGTCTAGCTCAATCCCAGTaGTCTGGAAGTCAGCATACGTTTCCTTGGGGATGG +
Preference number: 3 (lower is better)
Translates to: AHIPSQSLAQSQ*SGSQHTFPWGW
Trigger: CCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTGAGCTAGACTCTGACTCGGAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
3UTR TCA 72 bp CTCCGGACCCAGATGTCAAACACTGTCCGCCCATGTTaGTACCCAACTTCACAGATCTCATCAAATTTGCCG +
Preference number: 3 (lower is better)
Translates to: LRTQMSNTVRPC*YPTSQISSNLP
Trigger: CGGCAAATTTGATGAGATCTGTGAAGTTGGGTATCAACATGGGCGGACAGTGTTTGACATCTGGGTCCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp AGGAACAGGCAAGTATCCTCCAAGCTGTCAATCTTTTaGTGGTACACATGCAGCATCCCCGAGACCACAAAC +
Preference number: 3 (lower is better)
Translates to: RNRQVSSKLSIF*WYTCSIPETTN
Trigger: GTTTGTGGTCTCGGGGATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTGGAGGATACTTGCCTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp TGTATGTGCAGTCAGACTTGTCTCCTTGCCTGTATATaGCACGTCCAGCCTCTACTTCCATCCAGTCTAGAG +
Preference number: 3 (lower is better)
Translates to: CMCSQTCLLACI*HVQPLLPSSLE
Trigger: CTCTAGACTGGATGGAAGTAGAGGCTGGACGTGCCATATACAGGCAAGGAGACAAGTCTGACTGCACATACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp CAGGGGACAAGAAGGAGAACATGGATGGATATACCTTaGTGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGT +
Preference number: 3 (lower is better)
Translates to: QGTRRRTWMDIP*WPKSSQVAHQS
Trigger: ACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp CATGTTGATACCCAACTTCACAGATCTCATCAAATTTaGCGAAGTCCAGGGTGCGGTAACTGTCGATGGGAG +
Preference number: 3 (lower is better)
Translates to: HVDTQLHRSHQI*RSPGCGNCRWE
Trigger: CTCCCATCGACAGTTACCGCACCCTGGACTTCGGCAAATTTGATGAGATCTGTGAAGTTGGGTATCAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp GGGACAAGAAGGAGAACATGGATGGATATACCTTGCTaGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTG +
Preference number: 3 (lower is better)
Translates to: GTRRRTWMDIPC*PKSSQVAHQSV
Trigger: CACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGGTATATCCATCCATGTTCTCCTTCTTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR-3UTR CAA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATCCCTCATGGCTTTCTaGGAAGGCAGAAGTGTTAGA +
Preference number: 3 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLSLMAF*EGRSVR
Trigger: TCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGA...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CCA 72 bp AACAGGCAAGTATCCTCCAAGCTGTCAATCTTTTGCTaGTACACATGCAGCATCCCCGAGACCACAAACAAA +
Preference number: 3 (lower is better)
Translates to: NRQVSSKLSIFC*YTCSIPETTNK
Trigger: TTTGTTTGTGGTCTCGGGGATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTGGAGGATACTTGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR GCA 72 bp GCCTCTACTTCCATCCAGTCTAGAGCAAAATCAATCTaGCGTACAAAGGATGACATCCTCTTCACAACTGTG +
Preference number: 3 (lower is better)
Translates to: ASTSIQSRAKSI*RTKDDILFTTV
Trigger: CACAGTTGTGAAGAGGATGTCATCCTTTGTACGGCAGATTGATTTTGCTCTAGACTGGATGGAAGTAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR TCA 72 bp TCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTaGTCTTGTCAGGCAACTGAAGTAGCCTCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: SLEEARWLYHPV*SCQATEVASKE
Trigger: TTCCTTAGAGGCTACTTCAGTTGCCTGACAAGATCAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCTTTGGTCCTCTTCCTaGCTCGCTGCCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSLWSSS*LAAGVQ
Trigger: CTGCACCCCGGCAGCGAGTCAGGAAGAGGACCAAAG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR GCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAGGATGCAGTCAGCCTaGCGGATGCAGCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSRMQSA*RMQRWV
Trigger: GACCCAGCGCTGCATCCGGCAGGCTGACTGCATCCT...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCCTCTGCCCACTGCTTaGCCCGGATCCGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSPLPTA*PGSVFG
Trigger: GCCAAACACGGATCCGGGCCAAGCAGTGGGCAGAGG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCATCGCCATAGTTGGTaGGGTCTGTCTCGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSHRHSW*GLSRPG
Trigger: GCCGGGACGAGACAGACCTCACCAACTATGGCGATG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGGACAGCATGCACTGTaGTTGCTCTGGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHGQHAL*LLWPGG
Trigger: CCCACCAGGCCAGAGCAACCACAGTGCATGCTGTCC...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGCTGGCCCAGCCAACTaGAGAGCCGGTACTCATGGA +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHAGPAN*RAGTHG
Trigger: TCCATGAGTACCGGCTCTCCAGTTGGCTGGGCCAGC...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp CATACCCTCTGCCCACTGCTTGGCCCGGATCCGTGTTaGGCTGTAGCTCCGCTCCTCAGCAAACAGAGCACC +
Preference number: 4 (lower is better)
Translates to: HTLCPLLGPDPC*AVAPLLSKQST
Trigger: GGTGCTCTGTTTGCTGAGGAGCGGAGCTACAGCCAAACACGGATCCGGGCCAAGCAGTGGGCAGAGGGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATATTAGGGGTTCTCCAGTaGGCACCGCCAGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPILGVLQ*APPADP
Trigger: TGGGTCAGCTGGCGGTGCTCACTGGAGAACCCCTAA...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCCAGGACCGATGGCACTaGGGGCATGTTGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTAQDRWH*GHVGAP
Trigger: TGGAGCTCCAACATGCCCTCAGTGCCATCGGTCCTG...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTCTCAGCAAGGTCCGTaGAGGAGGAATTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHSQQGP*RRNWGR
Trigger: CCTGCCCCAATTCCTCCTTCACGGACCTTGCTGAGA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACATACCCTCTGCCCACTaGTTGGCCCGGATCCGTGTT +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHIPSAH*LARIRV
Trigger: AACACGGATCCGGGCCAAGCAGTGGGCAGAGGGTAT...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGTGGACACTGTCCCCTaGCAGGACCTCTTTGACCAC +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHVDTVP*QDLFDH
Trigger: GTGGTCAAAGAGGTCCTGCCAGGGGACAGTGTCCAC...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCGTGGACACTGTCCCCTaGCAGGACCTCTTTGACCAC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSVDTVP*QDLFDH
Trigger: GTGGTCAAAGAGGTCCTGCCAGGGGACAGTGTCCAC...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
3UTR CAA 72 bp CGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTaGCCCCCATGGATCTTGCCACATCCGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPGCQHRWQSQP*PPWILPHPLGG
Trigger: ACCTCCCAGCGGATGTGGCAAGATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp CTTCGCATGTTGAGCCACTCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTTGTTCCGGAACCTGTACTaGGGAGTGGGTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LRMLSHSTVREGTGPSSLFRNLY*GVGSAR
Trigger: ACGGGCAGAACCCACTCCTCAGTACAGGTTCCGGAA...CAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGAGTGGCTCAACATGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCACACAGCTGCTCCCATaGTCTGAGCTGCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSTQLLP*SELLNS
Trigger: GGAGTTCAGCAGCTCAGATCATGGGAGCAGCTGTGT...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTGCTCCTCCATGAAATaGAGCCTCCAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHCSSMK*SLQELR
Trigger: CCTGAGCTCCTGGAGGCTGCATTTCATGGAGGAGCA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATACATCAGCGTCTTGGATaGAGACCTCCAGCCGTCCGT +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIHQRLG*RPPAVR
Trigger: ACGGACGGCTGGAGGTCTGCATCCAAGACGCTGATG...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATACCACTGTGGACAGATTaGCAGGCGGGTTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIPLWTD*QAGSPS
Trigger: ACTTGGGGAACCCGCCTGGCAATCTGTCCACAGTGG...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACCGTGGGCAGCAGAGGTaGAAATGGCCAGAACACCAA +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHRGQQR*KWPEHQ
Trigger: TTGGTGTTCTGGCCATTTGCACCTCTGCTGCCCACG...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAGGAGAAGACACGGCGTaGGCAGCAGAGGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIGEDTA*AAEVQM
Trigger: CATTTGCACCTCTGCTGCCCACGCCGTGTCTTCTCC...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCTGGGCAAGCTTCTCTTaGAGAAGACACGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTAWASFS*RRHGVG
Trigger: GCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCA...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTTTGGTCCTCTTCCTaGCTCGCTGCCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWLWSSS*LAAGVQ
Trigger: CTGCACCCCGGCAGCGAGTCAGGAAGAGGACCAAAG...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTAGCTGGGTCCACGGTGTaGGTGTGCCGTCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RPTTPITQPMSLEEARWLAGSTV*VCRLPD
Trigger: ATCAGGCAGACGGCACACTCACACCGTGGACCCAGC...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGACTCTGCTAGTGCCCTaGGGATGCCCACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMTLLVP*GCPPGH
Trigger: GTGCCCAGGTGGGCATCCTCAGGGCACTAGCAGAGT...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACCCGCTGGGAGGTTGTTaGTGTAACCACCATCCATCA +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHPLGGC*CNHHPS
Trigger: TGATGGATGGTGGTTACATCAACAACCTCCCAGCGG...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCTTCACAACTGTGTGTaGCACGCCCAGGACAACATC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSLHNCV*HAQDNI
Trigger: GATGTTGTCCTGGGCGTGGCACACACAGTTGTGAAG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACAAGCATGCACTGTGGTTaGTCTGGCCTGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITSMHCG*SGLVGQ
Trigger: CTGACCCACCAGGCCAGAGCAACCACAGTGCATGCT...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCTCTTGCTTGTCCCCTaGTGGTCCTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSLLLVP*WSCNIF
Trigger: GAAGATGTTGCAGGACCAGCAGGGGACAAGCAAGAG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACATGTGAGCGTCTTGGATaGAGACCTCCAGCCGTCCGT +
Preference number: 4 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITCERLG*RPPAVR
Trigger: ACGGACGGCTGGAGGTCTGCATCCAAGACGCTCACA...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCTTAGAGCCACTTCCCTaGGACTGTCTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSLEPLP*DCLSSS
Trigger: GGATGAGCTCAGACAGTCCCAGGGAAGTGGCTCTAA...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACATACAGCACAATCCGGTaGATGTCCTCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITYSTIR*MSSCWP
Trigger: GGGCCAGCAGGAGGACATCCACCGGATTGTGCTGTA...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTAGCAGGTGTCCATCCTTaGGGTCGCAGAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPTTPITQPMSLEEARWLAGVHP*GRRVGA
Trigger: TGCCCCCACTCTGCGACCCCAAGGATGGACACCTGC...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATACAAGGGAAGGAGTCCTaGGACTGTTCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIQGKES*DCSGEV
Trigger: GACTTCCCCAGAACAGTCCCAGGACTCCTTCCCTTG...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp CACTCCACTGTGCGGGAAGGCACTGGACCGTCCTCTTaGTGCAGCAAGATTAGCTGCTTCTGGGCACGCACA +
Preference number: 4 (lower is better)
Translates to: HSTVREGTGPSS*CSKISCFWART
Trigger: TGTGCGTGCCCAGAAGCAGCTAATCTTGCTGCACAAAGAGGACGGTCCAGTGCCTTCCCGCACAGTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp CTAGCTCCACCCCCTCCAAGCACCAAGGCAATGGCATaGCCTGTCAGCATCCGTGCCAGGCGGGAAAAATCA +
Preference number: 4 (lower is better)
Translates to: LAPPPPSTKAMA*PVSIRARREKS
Trigger: TGATTTTTCCCGCCTGGCACGGATGCTGACAGGCAATGCCATTGCCTTGGTGCTTGGAGGGGGTGGAGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGGGACTGCTCCTCCATaGAATGCAGCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMGTAPP*NAASRS
Trigger: GCTCCTGGAGGCTGCATTTCATGGAGGAGCAGTCCC...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTGCTCCCATGATCTaGGCTGCTGAACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMAAPMI*AAELRG
Trigger: CCCTCGGAGTTCAGCAGCTCAGATCATGGGAGCAGC...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATGCCATCCCCAGGTCTaGGGTGGCTCCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAICHPQV*GGSLMA
Trigger: AGCCATGAGGGAGCCACCTCAGACCTGGGGATGGCA...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp CTCAATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTCTCAGCAAGGTCCGTaGAGGAGGAATTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LNPSALEVSIRFLGDGWQSQQGP*RRNWGR
Trigger: CCTGCCCCAATTCCTCCTTCACGGACCTTGCTGAGA...CTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR GCA 90 bp ACAACCTGTGGGTACCTGCGCTTGATAGACGTCAGAGCTCCTGCTGGCAGCTTAGACTCGCTGCCGGGGTaGAGAGGTATTCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: TTCGYLRLIDVRAPAGSLDSLPG*RGIPNQ
Trigger: TTGGTTGGGAATACCTCTGCACCCCGGCAGCGAGTC...TAAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR GCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCAGACTGTCACACAGCTaGTCCCATGATCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTARLSHS*SHDLSC
Trigger: GCAGCTCAGATCATGGGAGCAGCTGTGTGACAGTCT...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGGAGTCCCGGACAGCATaGACTGTGGTTGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWESRTA*TVVALA
Trigger: GGCCAGAGCAACCACAGTGCATGCTGTCCGGGACTC...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACTCCAGCTCACCTACTaGTGGCTCTTGCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITLQLTY*WLLLTQ
Trigger: TTGGGTGAGCAAGAGCCAGCAGTAGGTGAGCTGGAG...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGGACCGTCCTCTTTGTaGAGCAAGATTAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHGPSSL*SKISCF
Trigger: GAAGCAGCTAATCTTGCTGCACAAAGAGGACGGTCC...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGGTTGCTCTGGCCTGGTaGGTCAGCGTCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWVALAW*VSVSTT
Trigger: TGTGGTGGAGACGCTGACCCACCAGGCCAGAGCAAC...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCACTGTGGTTGCTCTaGCCTGGTGGGTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMALWLL*PGGSAS
Trigger: AGACGCTGACCCACCAGGCCAGAGCAACCACAGTGC...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp CTGTCTAGAGCAGCGGAACCCAGGCGTTGTTTGATGTaGTCACTGGTCAGCAGCAGGACAGGACCGATGGCA +
Preference number: 4 (lower is better)
Translates to: LSRAAEPRRCLM*SLVSSRTGPMA
Trigger: TGCCATCGGTCCTGTCCTGCTGCTGACCAGTGACAACATCAAACAACGCCTGGGTTCCGCTGCTCTAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp TGGATGCTGTCTAGAGCAGCGGAACCCAGGCGTTGTTaGATGTTGTCACTGGTCAGCAGCAGGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: WMLSRAAEPRRC*MLSLVSSRTGP
Trigger: CGGTCCTGTCCTGCTGCTGACCAGTGACAACATCAAACAACGCCTGGGTTCCGCTGCTCTAGACAGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTTCCCTGGGACTGTCTaGGCTCATCCACCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWFPGTV*AHPPPH
Trigger: ATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCCCCCAGTCTCATCCCTaGAATTTTCTGAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSPQSHP*NFLSSG
Trigger: TCCACTACTCAGAAAATTTCAGGGATGAGACTGGGG...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTAGTGCCTGCAGGAACATaGAGAAATGCCACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RPTTPITQPMSLEEARWLVPAGT*RNATRP
Trigger: TGGCCGGGTGGCATTTCTTCATGTTCCTGCAGGCAC...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCTTAAATCCAAGCTGGTaGCCTGTTGCAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTALNPSW*PVADPC
Trigger: GCAGGGATCTGCAACAGGTCACCAGCTTGGATTTAA...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCCGGACCATGATGATCTaGACAACCCTGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTARTMMI*TTLTRV
Trigger: AACTCTGGTCAGGGTTGTGCAGATCATCATGGTCCG...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTACCTACTGCTGGCTCTTaGTCACCCAAGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: RPTTPITQPMSLEEARWLPTAGS*SPKPTM
Trigger: CATCGTGGGCTTGGGTGAGCAAGAGCCAGCAGTAGG...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCTGCCGAAGTCCAGGGTaGGGTAACTGTCGATGGGAG +
Preference number: 4 (lower is better)
Translates to: KSAYVSLGMAGSSSSYSVCRSPG*GNCRWE
Trigger: CTCCCATCGACAGTTACCGCACCCTGGACTTCGGCA...GACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR GCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATACTAGCTCAATCCCAGTaGTCTGGAAGTCAGCATACG +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPILAQSQ*SGSQHT
Trigger: CGTATGCTGACTTCCAGAGCACTGGGATTGAGCTAG...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAGCGCAGAATCCTCTTaGCTAAAGACAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSSAESS*LKTALW
Trigger: CCAAAGTGCTGTCTTTAGCCAAGAGGATTCTGCGCT...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCAGTGGGCCTTCGAGATaGACAAAAAGCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTASGPSR*TKSCSL
Trigger: GAGACTGCAGCTTTTTGTCCATCTCGAAGGCCCACT...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATGTGGTTGCTCTGGCCTaGTGGGTCAGCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYVVALA*WVSVST
Trigger: GGTGGAGACGCTGACCCACCAGGCCAGAGCAACCAC...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCGTTGCAGATCCCTGCTaGAGACTGCCTAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTAVADPC*RLPKIF
Trigger: GAAGATCTTAGGCAGTCTCCAGCAGGGATCTGCAAC...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCACTGAGGGCATGTTaGAGCTCCAGAGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMALRAC*SSRAKA
Trigger: CGCCTTTGCTCTGGAGCTCCAACATGCCCTCAGTGC...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp AGTTGCTCATCAGAGTGTGGCAAAATCCTGGCACGGTaGTATGCCATCCCCAGGTCTGAGGTGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SCSSECGKILAR*YAIPRSEVAPS
Trigger: TGAGGGAGCCACCTCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp CGCAGAGTGGGGGCATATAGCCTGACAAGGACATGCTaGCACGGACATACCTCCACAGAGAGCCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: RRVGAYSLTRTC*HGHTSTESHLC
Trigger: ACACAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAGCATGTCCTTGTCAGGCTATATGCCCCCACTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp CGTGACACAATCTCAGCAAGGTCCGTGAAGGAGGAATaGGGGCAGGTGAACACCCCACAGTCCTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RDTISARSVKEE*GQVNTPQSFLL
Trigger: CAAGAGGAAGGACTGTGGGGTGTTCACCTGCCCCAATTCCTCCTTCACGGACCTTGCTGAGATTGTGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp TCAGGAAGGATGTTCCAGTCTTGGCCCCTGGTCATCTaGATTAGGGAGCCAAGGGAAGGAGTCCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SGRMFQSWPLVI*IREPREGVLGL
Trigger: CAGTCCCAGGACTCCTTCCCTTGGCTCCCTAATCAAGATGACCAGGGGCCAAGACTGGAACATCCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTCTCCCCGGGATGTGTaGGGAACAGGCAAGTATCCT +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWSPRDV*GTGKYP
Trigger: AGGATACTTGCCTGTTCCTCACACATCCCGGGGAGA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATAGAGAGCCATCTGTGTaGACCCGCATGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYREPSV*TRMAEA
Trigger: GGCCTCTGCCATGCGGGTTCACACAGATGGCTCTCT...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATAGACTCGCTGCCGGGGTaGAGAGGTATTCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIDSLPG*RGIPNQ
Trigger: TTGGTTGGGAATACCTCTGCACCCCGGCAGCGAGTC...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR GCA 90 bp GTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCTGCTCTTGCTTGTCCCCTaGTGGTCCTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: VSIRFLGDGWQFLLILGLLLLVP*WSCNIF
Trigger: GAAGATGTTGCAGGACCAGCAGGGGACAAGCAAGAG...CAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR GCA 90 bp CAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCTGATCACAGTCCTTCCTCTTaGTTGTCCCCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QHTFPWGWLAVPPHTRSDHSPSS*LSPAGP
Trigger: AGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTG...ATCAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CCA 90 bp CCTCTAGCTCCACCCCCTCCAAGCACCAAGGCAATGGCATTGCCTGTCAGCATCAGCGCAGAATCCTCTTaGCTAAAGACAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: PLAPPPPSTKAMALPVSISAESS*LKTALW
Trigger: CCAAAGTGCTGTCTTTAGCCAAGAGGATTCTGCGCT...GATGCTGACAGGCAATGCCATTGCCTTGGTGCTTGGAGGGGGTGGAGCTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp CTCGCCCAAGAGATGAATCAGTCGCGTTACAACCTGTGGGTACCTGCGCTTGATTCAGGCTCCCCAGGTTaGAATACGTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAQEMNQSRYNLWVPALDSGSPG*NTCSPS
Trigger: AGAAGGGGAGCACGTATTCCAACCTGGGGAGCCTGA...ATCAAGCGCAGGTACCCACAGGTTGTAACGCGACTGATTCATCTCTTGGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATAGTGCCATCAGCGTCTTaGATGCAGACCTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIVPSAS*MQTSSR
Trigger: ACGGCTGGAGGTCTGCATCCAAGACGCTGATGGCAC...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp TCTGGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTATGCTGAGGAGACTGTaGACACTGTCCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGSQHTFPWGWLAVPPHTMLRRL*TLSPGR
Trigger: CCTGCCAGGGGACAGTGTCCACAGTCTCCTCAGCAT...AGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTGAGTAGTGGAAGATaGCAGAGGGGGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWLSSGR*QRGSLR
Trigger: TCGCAGAGACCCCCTCTGCCATCTTCCACTACTCAG...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATTGGATGTCCTCCTGCTaGCCCAGCCAACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYWMSSC*PSQLES
Trigger: GCTCTCCAGTTGGCTGGGCCAGCAGGAGGACATCCA...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTACAACCTTTGCCCCCATaGATCTTGCCACATCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPTTPITQPMSLEEARWLQPLPP*ILPHPL
Trigger: CAGCGGATGTGGCAAGATCCATGGGGGCAAAGGTTG...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp CATATGACATCTGTCTCTTGGCTCGTCCAGCCACACTaGCTACTGACAAGAGAGGGATGGCCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HMTSVSWLVQPH*LLTREGWPGSQ
Trigger: CTGAGAGCCAGGCCATCCCTCTCTTGTCAGTAGCAAGTGTGGCTGGACGAGCCAAGAGACAGATGTCATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp TCAATCCCAGTGCTCTGGAAGTCAGCATACGTTTCCTaGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTC +
Preference number: 4 (lower is better)
Translates to: SIPVLWKSAYVS*GMAGSSSSYSV
Trigger: GACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTGGGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137913.8
ENSMUST00000155601.2
CDS-3UTR TCA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACATCCCTGAAATTTTCTaGGTAGTGGAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHIPEIF*VVEDGR
Trigger: TCTGCCATCTTCCACTACTCAGAAAATTTCAGGGAT...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCAACTGTTTTGTATGGTaGAGTGTGACCGGTGATCAC +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTANCFVW*SVTGDH
Trigger: GTGATCACCGGTCACACTGCACCATACAAAACAGTT...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGATCCCTGCTGGAGACTaGCTAAGATCTTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWIPAGD*LRSSRP
Trigger: TGGGCGAGAAGATCTTAGGCAGTCTCCAGCAGGGAT...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTGCAGCAAGATTAGCTaGTTCTGGGCACGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWCSKIS*FWARTA
Trigger: AGCTGTGCGTGCCCAGAAGCAGCTAATCTTGCTGCA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCTGTTCTGCAGAACATGTTaGTCATCCACTGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VSIRFLGDGWQFLLILGLFCRTC*SSTAAT
Trigger: GGTGGCTGCAGTGGATGAGCAACATGTTCTGCAGAA...CAGACCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGTCATCCACCTCCCCATaGTTAGAAGGCAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMSSTSP*LEGRGT
Trigger: AGTGCCTCTGCCTTCTAACCATGGGGAGGTGGATGA...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCCGACAACACTTTTCTTaGACTTGCTGGCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTARQHFS*TCWPKS
Trigger: ACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCG...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCAGCTCACCTACTGCTaGCTCTTGCTCACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYQLTYC*LLLTQA
Trigger: GGCTTGGGTGAGCAAGAGCCAGCAGTAGGTGAGCTG...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTTGCTTGTCCCCTGCTaGTCCTGCAACATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSQHTFPWGWLAVPPHTRLLVPC*SCNIFS
Trigger: AGAGAAGATGTTGCAGGACCAGCAGGGGACAAGCAA...CCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
3UTR CAA 72 bp TGGGCCTTCGAGATGGACAAAAAGCTGCAGTCTCGGTaGGCTCTGATGGTGAACATTAGGGGTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: WAFEMDKKLQSR*ALMVNIRGSPV
Trigger: CACTGGAGAACCCCTAATGTTCACCATCAGAGCCAACCGAGACTGCAGCTTTTTGTCCATCTCGAAGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATTCCGGAACCTGTACTaGGGAGTGGGTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLFRNLY*GVGSAR
Trigger: ACGGGCAGAACCCACTCCTCAGTACAGGTTCCGGAA...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR GCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCACAGTCCTTCCTCTTaGTTGTCCCCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYHSPSS*LSPAGP
Trigger: AGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTG...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp TCTCGTCCCGGCTGCCAACATCGATGGCAATCACAACCTTTGCCCCCATGGATCAGTGGCTTCTCAAAGTaGCCTAGAACCCGAACATTT +
Preference number: 4 (lower is better)
Translates to: SRPGCQHRWQSQPLPPWISGFSK*PRTRTF
Trigger: AAATGTTCGGGTTCTAGGCCACTTTGAGAAGCCACT...GATCCATGGGGGCAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTAATGCTGAGGAGACTGTaGACACTGTCCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLMLRRL*TLSPGR
Trigger: CCTGCCAGGGGACAGTGTCCACAGTCTCCTCAGCAT...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATACCACAAACAAAATATTaGCATCCTGATCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIPQTKY*HPDLPV
Trigger: AACAGGGAGATCAGGATGTCAATATTTTGTTTGTGG...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATACAGAGAACATGGATGTaGTTGGGTAGGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIQRTWM*LGRSGP
Trigger: TGGACCTGACCTACCCAATCACATCCATGTTCTCTG...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATTTCCCAACCAAGGTATaGGGGAGTGTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYFPTKV*GSVVTF
Trigger: GAAGGTGACCACACTCCCCCATACCTTGGTTGGGAA...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATGGGCGGAGGCTCTTTTaGCTGCAAAGTGGGATACTC +
Preference number: 4 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYGRRLF*LQSGIL
Trigger: GAGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCC...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATTCAGGCTCCCCAGGTTaGAATACGTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYSGSPG*NTCSPS
Trigger: AGAAGGGGAGCACGTATTCCAACCTGGGGAGCCTGA...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTTGCTCATCAGAGTGTaGCAAAATCCTGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWLLIRV*QNPGTV
Trigger: AACCGTGCCAGGATTTTGCCACACTCTGATGAGCAA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATACGTTTCCTTGGGGATaGCTGGCAGTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYTFPWG*LAVPPH
Trigger: ATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGT...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp CCTGACCAGAGTTTCAGGGTATTTCTCAAACACTCCTaGAAAAGCTGCTGCAGGAAGCCAGAGCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: PDQSFRVFLKHS*KSCCRKPEHGG
Trigger: TCCACCGTGCTCTGGCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAATACCCTGAAACTCTGGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp TCAAGCTGCTCCTCTGGACCATATGACATCTGTCTCTaGGCTCGTCCAGCCACACTTGCTACTGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSCSSGPYDICL*ARPATLATDKR
Trigger: TCTCTTGTCAGTAGCAAGTGTGGCTGGACGAGCCAAGAGACAGATGTCATATGGTCCAGAGGAGCAGCTTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
3UTR CAA 72 bp AGCCACAGGTCCTCAATCTGCCGGTCTTTGAAGATGTaGCTGATGCTGCTATTGAAGCCAGTGCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SHRSSICRSLKM*LMLLLKPVPEN
Trigger: GTTCTCTGGCACTGGCTTCAATAGCAGCATCAGCAACATCTTCAAAGACCGGCAGATTGAGGACCTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp GGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGACTTCTGATGGCAGATaGGAGTTCTTCACATCAAAC +
Preference number: 4 (lower is better)
Translates to: GSQHTFPWGWLAVPPHTRTSDGR*EFFTSN
Trigger: GTTTGATGTGAAGAACTCTCATCTGCCATCAGAAGT...CCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp TCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTAGCCACACTTGCTACTaGCAAGAGAGGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: SNNTAHVSGRSQMAISSSSHTCY*QERDGL
Trigger: CAGGCCATCCCTCTCTTGTCAGTAGCAAGTGTGGCT...ACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp TCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTCCAAGGCAATGGCATTaGCTGTCAGCATCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SNNTAHVSGRSQMAISSSPRQWH*LSASVP
Trigger: TGGCACGGATGCTGACAGGCAATGCCATTGCCTTGG...ACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGTGCCGAAGTCCAGGGTaGGGTAACTGTCGATGGGAG +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLCRSPG*GNCRWE
Trigger: CTCCCATCGACAGTTACCGCACCCTGGACTTCGGCA...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GCAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCATCCTGGGAAGACTCCATGCAGCAGGGAATTCTaGAGAACATGTTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: AVPPHTRSDSQTHPGKTPCSREF*RTCCSS
Trigger: GGATGAGCAACATGTTCTGCAGAATTCCCTGCTGCA...TGGAGTCTTCCCAGGATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CCA 90 bp TCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTAAGAGAGGGATGGCCTaGCTCTCAGGGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SNNTAHVSGRSQMAISSSKRGMA*LSGLKS
Trigger: GCTCTTCAACCCTGAGAGCCAGGCCATCCCTCTCTT...ACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATAAGAATGACGGTCTGGTaGTCGTTGGAAAACACGTGT +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIRMTVW*SLENTC
Trigger: ACACGTGTTTTCCAACGACCACCAGACCGTCATTCT...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATCAAGCACCAAGGCAATaGCATTGCCTGTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYQAPRQ*HCLSAS
Trigger: GGATGCTGACAGGCAATGCCATTGCCTTGGTGCTTG...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATAAGGATGTTCCAGTCTTaGCCCCTGGTCATCTTGATT +
Preference number: 4 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIRMFQS*PLVILI
Trigger: AATCAAGATGACCAGGGGCCAAGACTGGAACATCCT...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
3UTR CAA 72 bp GAGGAACAGGCAAGTATCCTCCAAGCTGTCAATCTTTaGCTGGTACACATGCAGCATCCCCGAGACCACAAA +
Preference number: 4 (lower is better)
Translates to: EEQASILQAVNL*LVHMQHPRDHK
Trigger: TTTGTGGTCTCGGGGATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTGGAGGATACTTGCCTGTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTATAGTCTTCATCATTaGTGTCATACCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRPTTPITQPMSLEEARWYSLHH*CHTLCP
Trigger: TGGGCAGAGGGTATGACATCAATGATGAAGACTATA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGAAGCTGTCAATCTTTTaGTGGTACACATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMKLSIF*WYTCSI
Trigger: GATGCTGCATGTGTACCAGCAAAAGATTGACAGCTT...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGAGAAGCAGGCAGTGCTaGCACTGTGGACAGATTGCC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLRSRQC*HCGQIA
Trigger: GGCAATCTGTCCACAGTGGCAGCACTGCCTGCTTCT...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCATCCTGGGAAGACTCCAGTCGAGTCTGAATCTCTaGCATGTTCAACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: QFLLILGLIVRLILGRLQSSLNL*HVQHLD
Trigger: GTCAAGGTGTTGAACATGGCAGAGATTCAGACTCGA...CTGGAGTCTTCCCAGGATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCCCTCATGGCTTTCTTaGAAGGCAGAAGTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYPSWLS*KAEVLE
Trigger: CTCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGG...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATTCGCGTTACAACCTGTaGGTACCTGCGCTTGATAGA +
Preference number: 4 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYSRYNL*VPALDR
Trigger: TCTATCAAGCGCAGGTACCCACAGGTTGTAACGCGA...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATTGCTTGTCCCCTGCTaGTCCTGCAACATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLLLVPC*SCNIFS
Trigger: AGAGAAGATGTTGCAGGACCAGCAGGGGACAAGCAA...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGATGGTGGACTGGGACTaGTCCTCCATGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLMVDWD*SSMKCS
Trigger: GCTGCATTTCATGGAGGAGCAGTCCCAGTCCACCAT...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAAAGACCATATGTTTaGAAAGTTCCAGAAATAGTG +
Preference number: 4 (lower is better)
Translates to: LWGYKGAGEVKRPTTPITQRPYV*KVPEIV
Trigger: CACTATTTCTGGAACTTTGCAAACATATGGTCTTTG...TGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR GCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGAGGGACCTCTCAAGCTaGTCCTCTGGACCATATGAC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLRDLSS*SSGPYD
Trigger: GTCATATGGTCCAGAGGAGCAGCTTGAGAGGTCCCT...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp TCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTTTGCTGGTACACATaGAGCATCCCCGAGACCACA +
Preference number: 4 (lower is better)
Translates to: SNNTAHVSGRSQMAISSSFCWYT*SIPETT
Trigger: TGTGGTCTCGGGGATGCTGCATGTGTACCAGCAAAA...ACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGTTCCCAACCAAGGTATaGGGGAGTGTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLFPTKV*GSVVTF
Trigger: GAAGGTGACCACACTCCCCCATACCTTGGTTGGGAA...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGAAGATTAGCTGCTTCTaGGCACGCACAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLKISCF*ARTAVL
Trigger: GAGCACAGCTGTGCGTGCCCAGAAGCAGCTAATCTT...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATACTTCTGATGGCAGATaGGAGTTCTTCACATCAAAC +
Preference number: 4 (lower is better)
Translates to: PTTPITQPMSLEEARWLYTSDGR*EFFTSN
Trigger: GTTTGATGTGAAGAACTCTCATCTGCCATCAGAAGT...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTAAGTGGCTTCTCAAAGTaGCCTAGAACCCGAACATTT +
Preference number: 4 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLSGFSK*PRTRTF
Trigger: AAATGTTCGGGTTCTAGGCCACTTTGAGAAGCCACT...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR TCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGTTCTCAAACACTCCTTaGAAAGCTGCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLFSNTP*KAAAGS
Trigger: GCTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAA...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATAAAGAGTTCCCAAGTTaGTCATCAGAGTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYKEFPS*SSECGK
Trigger: TTTGCCACACTCTGATGAGCAACTTGGGAACTCTTT...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR GCA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGTCGAGTCTGAATCTCTaGCATGTTCAACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLSSLNL*HVQHLD
Trigger: GTCAAGGTGTTGAACATGGCAGAGATTCAGACTCGA...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR TCA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTAAAAATATTGACATCCTaGTCTCCCTGTTTTGACACT +
Preference number: 4 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLKILTS*SPCFDT
Trigger: AGTGTCAAAACAGGGAGATCAGGATGTCAATATTTT...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAGGTGCCATCAGCGTCTaGGATGCAGACCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: LLWGYKGAGEVKRPTTPIGAISV*DADLQP
Trigger: CGGCTGGAGGTCTGCATCCAAGACGCTGATGGCACC...TATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACCCTGGCAGGACCTCTTaGACCACCACTTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHPGRTS*TTTSVP
Trigger: TGGCACCGAAGTGGTGGTCAAAGAGGTCCTGCCAGG...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CAA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCGTCAGGCTCCCCAGGTaGGAATACGTGCTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTAVRLPR*EYVLPF
Trigger: GAAGGGGAGCACGTATTCCAACCTGGGGAGCCTGAC...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CAA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCGCCTGGCTCTCAGGGTaGAAGAGCTCTGTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSAWLSG*KSSVVS
Trigger: GCTGACTACAGAGCTCTTCAACCCTGAGAGCCAGGC...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTTGGGCAAGCTTCTCTaGGAGAAGACACGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHLGKLL*EKTRRG
Trigger: CCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS CCA 90 bp AGGGTAAGGAGGGCGCCAATTCCAATCCCCATCAGCATGGTGGACTaGGACTGCTCCTCCATGAAATGCAGCCTCCAGGAGCTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RVRRAPIPIPISMVD*DCSSMKCSLQELRV
Trigger: CACCCTGAGCTCCTGGAGGCTGCATTTCATGGAGGAGCAGTCCCAGTCCACCATGCTGATGGGGATTGGAATTGGCGCCCTCCTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000153618.8
CDS CCA 90 bp TTAGAGCCACTTCCCTGGGACTGTCTGAGCTCATCCACCTCCCCATaGTTAGAAGGCAGAGGCACTGAGCTGCTGAACTCCGAGGGCCGT +
Preference number: 5 (lower is better)
Translates to: LEPLPWDCLSSSTSP*LEGRGTELLNSEGR
Trigger: ACGGCCCTCGGAGTTCAGCAGCTCAGTGCCTCTGCCTTCTAACCATGGGGAGGTGGATGAGCTCAGACAGTCCCAGGGAAGTGGCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146153.2
CDS-3UTR CAA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACAGGGCGGAGGCTCTTTaGGCTGCAAAGTGGGATACT +
Preference number: 5 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHRAEAL*AAKWDT
Trigger: AGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCT...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
CDS-3UTR CAA 90 bp CTCCTCAGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACTGGCCCCTGGTCATCTaGATTAGGGAGCCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LLSTAVGIQGCRGSEEAHWPLVI*IREPRE
Trigger: TTCCCTTGGCTCCCTAATCAAGATGACCAGGGGCCA...GTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp AGTACTGCTGTGGGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAGCGGAACCCAGGCGTaGTTTGATGTTGTCACTGGT +
Preference number: 5 (lower is better)
Translates to: STAVGIQGCRGSEEAHDSSGTQA*FDVVTG
Trigger: ACCAGTGACAACATCAAACAACGCCTGGGTTCCGCT...GGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCCCACAGCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GGGATACAAGGGTGCCGGGGAAGTGAAGAGGCCCACGACTCCAATAACACAGCCAGGCGTTGTTTGATGTaGTCACTGGTCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GIQGCRGSEEAHDSNNTARRCLM*SLVSSR
Trigger: CCTGCTGCTGACCAGTGACAACATCAAACAACGCCT...GGCTGTGTTATTGGAGTCGTGGGCCTCTTCACTTCCCCGGCACCCTTGTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATGGCCCGGATCCGTGTTaGGCTGTAGCTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PTTPITQPMSLEEARWLYGPDPC*AVAPLL
Trigger: GAGGAGCGGAGCTACAGCCAAACACGGATCCGGGCC...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGTTGCCCCCATGGATCTaGCCACATCCGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMLPPWI*PHPLGG
Trigger: ACCTCCCAGCGGATGTGGCAAGATCCATGGGGGCAA...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp TTAGGGAGCCAAGGGAAGGAGTCCTGGGACTGTTCTGGGGAAGTCAAGCTGGGGCAGATCTCATCAAATTaGCCGAAGTCCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LGSQGKESWDCSGEVKLGQISSN*PKSRVR
Trigger: CCGCACCCTGGACTTCGGCAAATTTGATGAGATCTG...CCCCAGCTTGACTTCCCCAGAACAGTCCCAGGACTCCTTCCCTTGGCTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CAA 90 bp GGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTCGGTCCGTGAAGGAGGAATaGGGGCAGGTGAACACCCCA +
Preference number: 5 (lower is better)
Translates to: GSQHTFPWGWLAVPPHTRSVKEE*GQVNTP
Trigger: TGGGGTGTTCACCTGCCCCAATTCCTCCTTCACGGA...CCGAGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CAA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTACATCCTGTGAGCGTCTaGGATGCAGACCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: RPTTPITQPMSLEEARWLHPVSV*DADLQP
Trigger: CGGCTGGAGGTCTGCATCCAAGACGCTCACAGGATG...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS TCA 90 bp AGCGCAGAATCCTCTTGGCTAAAGACAGCACTTTGGTCCTCTTCCTaGCTCGCTGCCGGGGTGCAGAGGTATTCCCAACCAAGGTATGGG +
Preference number: 5 (lower is better)
Translates to: SAESSWLKTALWSSS*LAAGVQRYSQPRYG
Trigger: CCCATACCTTGGTTGGGAATACCTCTGCACCCCGGCAGCGAGTCAGGAAGAGGACCAAAGTGCTGTCTTTAGCCAAGAGGATTCTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS TCA 90 bp CTTGGATGCAGACCTCCAGCCGTCCGTCCTGAACCACATAGATGCTaGTGTCAGGCTCCCCAGGTTGGAATACGTGCTCCCCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LGCRPPAVRPEPHRC*CQAPQVGIRAPLLV
Trigger: TACAAGAAGGGGAGCACGTATTCCAACCTGGGGAGCCTGACATCAGCATCTATGTGGTTCAGGACGGACGGCTGGAGGTCTGCATCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS GCA 90 bp ATCCTCTTGGCTAAAGACAGCACTTTGGTCCTCTTCCTGACTCGCTaGCGGGGTGCAGAGGTATTCCCAACCAAGGTATGGGGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: ILLAKDSTLVLFLTR*RGAEVFPTKVWGSV
Trigger: CACACTCCCCCATACCTTGGTTGGGAATACCTCTGCACCCCGGCAGCGAGTCAGGAAGAGGACCAAAGTGCTGTCTTTAGCCAAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
ENSMUST00000153618.8
CDS-3UTR CAA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGACCTACTGCTGGCTCTaGCTCACCCAAGCCCACGAT +
Preference number: 5 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMTYCWL*LTQAHD
Trigger: ATCGTGGGCTTGGGTGAGCAAGAGCCAGCAGTAGGT...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTACCCTCTGCCCACTGCTaGGCCCGGATCCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLPSAHC*ARIRVW
Trigger: CCAAACACGGATCCGGGCCAAGCAGTGGGCAGAGGG...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGTCCGTGAAGGAGGAATaGGGGCAGGTGAACACCCCA +
Preference number: 5 (lower is better)
Translates to: KRPTTPITQPMSLEEARWSVKEE*GQVNTP
Trigger: TGGGGTGTTCACCTGCCCCAATTCCTCCTTCACGGA...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GCAGTTCCTCCTCATACTCGGTCTGATAGTCAGACTCATCCTGGGAAGACTCCAAGTCCTTCCTCTTGCTaGTCCCCTGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: AVPPHTRSDSQTHPGKTPSPSSC*SPAGPA
Trigger: TGCAGGACCAGCAGGGGACAAGCAAGAGGAAGGACT...TGGAGTCTTCCCAGGATGAGTCTGACTATCAGACCGAGTATGAGGAGGAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS-3UTR CAA 90 bp TCTGGAAGTCAGCATACGTTTCCTTGGGGATGGCTGGCAGTTCCTCCTCATACTAGGGCGGAGGCTCTTTaGGCTGCAAAGTGGGATACT +
Preference number: 5 (lower is better)
Translates to: SGSQHTFPWGWLAVPPHTRAEAL*AAKWDT
Trigger: AGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCT...AGTATGAGGAGGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS-3UTR CAA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCAAGCTGGTGACCTGTaGCAGATCCCTGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PTTPITQPMSLEEARWLYQAGDL*QIPAGD
Trigger: GTCTCCAGCAGGGATCTGCAACAGGTCACCAGCTTG...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGAACCCAGGCGTTGTTaGATGTTGTCACTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMEPRRC*MLSLVS
Trigger: GCTGACCAGTGACAACATCAAACAACGCCTGGGTTC...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGAGCAGGTGTCCATCCTaGGGGTCGCAGAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLSRCPS*GSQSGG
Trigger: GCCCCCACTCTGCGACCCCAAGGATGGACACCTGCT...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATACCAAGGCAATGGCATaGCCTGTCAGCATCCGTGCC +
Preference number: 5 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYTKAMA*PVSIRA
Trigger: GGCACGGATGCTGACAGGCAATGCCATTGCCTTGGT...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTAAGTCCTTCCTCTTGCTaGTCCCCTGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLSPSSC*SPAGPA
Trigger: TGCAGGACCAGCAGGGGACAAGCAAGAGGAAGGACT...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GTCATCTTGATTAGGGAGCCAAGGGAAGGAGTCCTGGGACTGTTCTGGGGAAGTATTCTGCAGAACATGTaGCTCATCCACTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VILIREPREGVLGLFWGSILQNM*LIHCSH
Trigger: GTGGCTGCAGTGGATGAGCAACATGTTCTGCAGAAT...ACTTCCCCAGAACAGTCCCAGGACTCCTTCCCTTGGCTCCCTAATCAAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155601.2
CDS GCA 90 bp TCTGTAAGATCAGCCTCAAGCAGGGAGGGCGGAGGCTCTTTTGGCTaGAAAGTGGGATACTCTTTCTTAAAGCGCAGAATCCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SVRSASSREGGGSFG*KVGYSFLKRRILLA
Trigger: AGCCAAGAGGATTCTGCGCTTTAAGAAAGAGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCTCCCTGCTTGAGGCTGATCTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS CCA 90 bp AGTAGTGGAAGATGGCAGAGGGGGTCTCTGCGACAACACTTTTCTTaGACTTGCTGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTG +
Preference number: 5 (lower is better)
Translates to: SSGRWQRGSLRQHFS*TCWPKSSQVAHQSV
Trigger: CACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGCAGAGACCCCCTCTGCCATCTTCCACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS-3UTR CAA 90 bp AGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTAACACTTTTCTTGGACTaGCTGGCCAAAGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RPTTPITQPMSLEEARWLTLFLD*LAKEFP
Trigger: TGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGT...TAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS GCA 90 bp GCGACAACACTTTTCTTGGACTTGCTGGCCAAAGAGTTCCCAAGTTaGTCATCAGAGTGTGGCAAAATCCTGGCACGGTTGTATGCCATC +
Preference number: 5 (lower is better)
Translates to: ATTLFLDLLAKEFPS*SSECGKILARLYAI
Trigger: GATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS-3UTR CAA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGTTTCTCAAACACTCCTaGAAAAGCTGCTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMFLKHS*KSCCRK
Trigger: CTTCCTGCAGCAGCTTTTCAAGGAGTGTTTGAGAAA...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp TCTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTAAAAATCCTGGCACGGTaGTATGCCATCCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SKEWVQPQSKGEAQVFYLKILAR*YAIPRS
Trigger: AGACCTGGGGATGGCATACAACCGTGCCAGGATTTT...TAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATACAAAGAGTTCCCAAGTaGCTCATCAGAGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIQRVPK*LIRVWQ
Trigger: TTGCCACACTCTGATGAGCAACTTGGGAACTCTTTG...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp GAAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGCAAGCTGTCAATCTTTaGCTGGTACACATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: EEAHDSNNTAHVSGRSQMQAVNL*LVHMQH
Trigger: ATGCTGCATGTGTACCAGCAAAAGATTGACAGCTTG...CATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp TCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTGTGGGTACCTGCGCTaGATAGACGTCAGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SNNTAHVSGRSQMAISSSCGYLR*IDVRAP
Trigger: AGGAGCTCTGACGTCTATCAAGCGCAGGTACCCACA...ACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATTTGCTGATGCTGCTATaGAAGCCAGTGCCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: PTTPITQPMSLEEARWLYLLMLL*KPVPEN
Trigger: GTTCTCTGGCACTGGCTTCAATAGCAGCATCAGCAA...ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp AAGAGGCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCGGTCTTTGAAGATGTaGCTGATGCTGCTATTGAAG +
Preference number: 5 (lower is better)
Translates to: KRPTTPITQPMSLEEARWRSLKM*LMLLLK
Trigger: CTTCAATAGCAGCATCAGCAACATCTTCAAAGACCG...CCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS CCA 90 bp AAACTCTGTAAGATCAGCCTCAAGCAGGGAGGGCGGAGGCTCTTTTaGCTGCAAAGTGGGATACTCTTTCTTAAAGCGCAGAATCCTCTT +
Preference number: 5 (lower is better)
Translates to: KLCKISLKQGGRRLF*LQSGILFLKAQNPL
Trigger: AAGAGGATTCTGCGCTTTAAGAAAGAGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCTCCCTGCTTGAGGCTGATCTTACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS-3UTR CAA 90 bp GCCCACGACTCCAATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATATGTGCAGTCAGACTaGTCTCCTTGCCTGTATATG +
Preference number: 5 (lower is better)
Translates to: AHDSNNTAHVSGRSQMAIYVQSD*SPCLYM
Trigger: CATATACAGGCAAGGAGACAAGTCTGACTGCACATA...TATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS GCA 90 bp ATGTCAGGCTCCCCAGGTTGGAATACGTGCTCCCCTTCTTGTAGCTaGACAAAGACCATATGTTTGCAAAGTTCCAGAAATAGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: MSGSPGWNTCSPSCS*TKTICLQSSRNSGF
Trigger: GAAGCCACTATTTCTGGAACTTTGCAAACATATGGTCTTTGTGCAGCTACAAGAAGGGGAGCACGTATTCCAACCTGGGGAGCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS-3UTR CAA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGCAGATCTCATCAAATTaGCCGAAGTCCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLQISSN*PKSRVR
Trigger: CCGCACCCTGGACTTCGGCAAATTTGATGAGATCTG...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp CTAAGGAATGGGTGCAGCCTCAGTCTAAGGGTGAGGCCCAGGTGTTTTATTTATTTCCCCAAGTCCCATTaGCTGCTTGCTGTGTTAAAT +
Preference number: 5 (lower is better)
Translates to: LRNGCSLSLRVRPRCFIYFPKSH*LLAVLN
Trigger: ATTTAACACAGCAAGCAGCAAATGGGACTTGGGGAA...ATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGCACCCATTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS-3UTR CAA 90 bp AATAACACAGCCCATGTCTCTGGAAGAAGCCAGATGGCTATATCATCCAGTTTGTCCCTCATGGCTTTCTaGGAAGGCAGAAGTGTTAGA +
Preference number: 5 (lower is better)
Translates to: NNTAHVSGRSQMAISSSLSLMAF*EGRSVR
Trigger: TCTAACACTTCTGCCTTCCAAGAAAGCCATGAGGGA...CAAACTGGATGATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS TCA 90 bp AGAACCCGAACATTTTTCAACATGTACAAGACTTCTGATGGCAGATaGGAGTTCTTCACATCAAACTCTGTAAGATCAGCCTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTRTFFNMYKTSDGR*EFFTSNSVRSASSR
Trigger: CCTGCTTGAGGCTGATCTTACAGAGTTTGATGTGAAGAACTCTCATCTGCCATCAGAAGTCTTGTACATGTTGAAAAATGTTCGGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS CCA 90 bp CATAAAACATTACTTTGTCTCTCTTCCGGAACCTGTACTGAGGAGTaGGTTCTGCCCGTCGTAATCTTCTCACTCTTCTGTATACAAAAA +
Preference number: 5 (lower is better)
Translates to: HKTLLCLSSGTCTEE*VLPVVIFSLFCIQK
Trigger: TTTTTGTATACAGAAGAGTGAGAAGATTACGACGGGCAGAACCCACTCCTCAGTACAGGTTCCGGAAGAGAGACAAAGTAATGTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000153618.8
CDS TCA 72 bp TCCCCATCAGCATGGTGGACTGGGACTGCTCCTCCATaGAATGCAGCCTCCAGGAGCTCAGGGTGGTACCCA +
Preference number: 6 (lower is better)
Translates to: SPSAWWTGTAPP*NAASRSSGWYP
Trigger: TGGGTACCACCCTGAGCTCCTGGAGGCTGCATTTCATGGAGGAGCAGTCCCAGTCCACCATGCTGATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000153618.8
CDS CCA 72 bp CGCTGCCGGGGTGCAGAGGTATTCCCAACCAAGGTATaGGGGAGTGTGGTCACCTTCCTCATGATCTTCCGG +
Preference number: 6 (lower is better)
Translates to: RCRGAEVFPTKV*GSVVTFLMIFR
Trigger: CCGGAAGATCATGAGGAAGGTGACCACACTCCCCCATACCTTGGTTGGGAATACCTCTGCACCCCGGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
ENSMUST00000153618.8
CDS CAA 72 bp GACCTCTTTGACCACCACTTCGGTGCCATCAGCGTCTaGGATGCAGACCTCCAGCCGTCCGTCCTGAACCAC +
Preference number: 6 (lower is better)
Translates to: DLFDHHFGAISV*DADLQPSVLNH
Trigger: GTGGTTCAGGACGGACGGCTGGAGGTCTGCATCCAAGACGCTGATGGCACCGAAGTGGTGGTCAAAGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000152777.2
CDS CAA 90 bp CCCTGGCAGGACCTCTTTGACCACCACTTCGGTGCCATCAGCGTCTaGGATGCAGACCTCCAGCCGTCCGTCCTGAACCACATAGATGCT +
Preference number: 6 (lower is better)
Translates to: PWQDLFDHHFGAISV*DADLQPSVLNHIDA
Trigger: AGCATCTATGTGGTTCAGGACGGACGGCTGGAGGTCTGCATCCAAGACGCTGATGGCACCGAAGTGGTGGTCAAAGAGGTCCTGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000152777.2
CDS TCA 72 bp AGACCTCCAGCCGTCCGTCCTGAACCACATAGATGCTaGTGTCAGGCTCCCCAGGTTGGAATACGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: RPPAVRPEPHRC*CQAPQVGIRAP
Trigger: GGGAGCACGTATTCCAACCTGGGGAGCCTGACATCAGCATCTATGTGGTTCAGGACGGACGGCTGGAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS GCA 72 bp ACCACCACTTCGGTGCCATCCTGTGAGCGTCTTGGATaGAGACCTCCAGCCGTCCGTCCTGAACCACATAGA +
Preference number: 6 (lower is better)
Translates to: TTTSVPSCERLG*RPPAVRPEPHR
Trigger: TCTATGTGGTTCAGGACGGACGGCTGGAGGTCTGCATCCAAGACGCTCACAGGATGGCACCGAAGTGGTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137913.8
CDS GCA 72 bp ATCAGCATGGTGGACTGGGACTGCTCCTCCATGAAATaGAGCCTCCAGGAGCTCAGGGTGGTACCCAAACAG +
Preference number: 6 (lower is better)
Translates to: ISMVDWDCSSMK*SLQELRVVPKQ
Trigger: CTGTTTGGGTACCACCCTGAGCTCCTGGAGGCTGCATTTCATGGAGGAGCAGTCCCAGTCCACCATGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000153618.8
CDS CCA 72 bp ATCCAAAATGCTGAGGAGACTGTGGACACTGTCCCCTaGCAGGACCTCTTTGACCACCACTTCGGTGCCATC +
Preference number: 6 (lower is better)
Translates to: IQNAEETVDTVP*QDLFDHHFGAI
Trigger: GATGGCACCGAAGTGGTGGTCAAAGAGGTCCTGCCAGGGGACAGTGTCCACAGTCTCCTCAGCATTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS GCA 72 bp TCAGCCTCAAGCAGGGAGGGCGGAGGCTCTTTTGGCTaGAAAGTGGGATACTCTTTCTTAAAGCGCAGAATC +
Preference number: 6 (lower is better)
Translates to: SASSREGGGSFG*KVGYSFLKRRI
Trigger: GATTCTGCGCTTTAAGAAAGAGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCTCCCTGCTTGAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS GCA 72 bp CGAGACAGCGGCACGGGCAGAAACTGTTTTGTATGGTaGAGTGTGACCGGTGATCACATCCAAAATGCTGAG +
Preference number: 6 (lower is better)
Translates to: RDSGTGRNCFVW*SVTGDHIQNAE
Trigger: CTCAGCATTTTGGATGTGATCACCGGTCACACTGCACCATACAAAACAGTTTCTGCCCGTGCCGCTGTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045295.14
CDS CCA 72 bp AAGATCAGCCTCAAGCAGGGAGGGCGGAGGCTCTTTTaGCTGCAAAGTGGGATACTCTTTCTTAAAGCGCAG +
Preference number: 6 (lower is better)
Translates to: KISLKQGGRRLF*LQSGILFLKAQ
Trigger: CTGCGCTTTAAGAAAGAGTATCCCACTTTGCAGCCAAAAGAGCCTCCGCCCTCCCTGCTTGAGGCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS CAA 90 bp TACTCTTTCTTAAAGCGCAGAATCCTCTTGGCTAAAGACAGCACTTaGGTCCTCTTCCTGACTCGCTGCCGGGGTGCAGAGGTATTCCCA +
Preference number: 6 (lower is better)
Translates to: YSFLKRRILLAKDST*VLFLTRCRGAEVFP
Trigger: TGGGAATACCTCTGCACCCCGGCAGCGAGTCAGGAAGAGGACCAAAGTGCTGTCTTTAGCCAAGAGGATTCTGCGCTTTAAGAAAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2
CDS CAA 90 bp TGGAAGATGGCAGAGGGGGTCTCTGCGACAACACTTTTCTTGGACTaGCTGGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: WKMAEGVSATTLFLD*LAKEFPSCSSECGK
Trigger: TTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGCAGAGACCCCCTCTGCCATCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS CCA 72 bp AGGGGGTCTCTGCGACAACACTTTTCTTGGACTTGCTaGCCAAAGAGTTCCCAAGTTGCTCATCAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: RGSLRQHFSWTC*PKSSQVAHQSV
Trigger: CACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGCAGAGACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS CCA 72 bp AGATGGCAGAGGGGGTCTCTGCGACAACACTTTTCTTaGACTTGCTGGCCAAAGAGTTCCCAAGTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: RWQRGSLRQHFS*TCWPKSSQVAH
Trigger: ATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGCAGAGACCCCCTCTGCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS GCA 72 bp CTTTTCTTGGACTTGCTGGCCAAAGAGTTCCCAAGTTaGTCATCAGAGTGTGGCAAAATCCTGGCACGGTTG +
Preference number: 6 (lower is better)
Translates to: LFLDLLAKEFPS*SSECGKILARL
Trigger: CAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS CAA 90 bp TGCGACAACACTTTTCTTGGACTTGCTGGCCAAAGAGTTCCCAAGTaGCTCATCAGAGTGTGGCAAAATCCTGGCACGGTTGTATGCCAT +
Preference number: 6 (lower is better)
Translates to: CDNTFLGLAGQRVPK*LIRVWQNPGTVVCH
Trigger: ATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGATGAGCAACTTGGGAACTCTTTGGCCAGCAAGTCCAAGAAAAGTGTTGTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045295.14
ENSMUST00000146153.2
CDS CCA 72 bp TTACTTTGTCTCTCTTCCGGAACCTGTACTGAGGAGTaGGTTCTGCCCGTCGTAATCTTCTCACTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LLCLSSGTCTEE*VLPVVIFSLFC
Trigger: ACAGAAGAGTGAGAAGATTACGACGGGCAGAACCCACTCCTCAGTACAGGTTCCGGAAGAGAGACAAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000153618.8
CDS GCA 72 bp TCCCCAGGTTGGAATACGTGCTCCCCTTCTTGTAGCTaGACAAAGACCATATGTTTGCAAAGTTCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: SPGWNTCSPSCS*TKTICLQSSRN
Trigger: ATTTCTGGAACTTTGCAAACATATGGTCTTTGTGCAGCTACAAGAAGGGGAGCACGTATTCCAACCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045295.14
ENSMUST00000137913.8
ENSMUST00000152777.2