Pregenerated sensors for PNPLA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018868Ensembl transcript IDs: ENSMUST00000019012.4, ENSMUST00000230566.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTaGAGATCAAGGTCCCAGGAACAGCTGCAGAGGGTGGGCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QWPEHTVGWKHPERP*RSRSQEQLQRVGSQ Trigger: CTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR CCA 90 bp | ACAAAACTGACAAGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTaGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: TKLTRREQWPEHTVG*KHPERPWRSRSQEQ Trigger: CTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR CCA 90 bp | ATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTaGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: ISSSSLVQNTPLLDT*LCLSHEDPELRCVS Trigger: TGAGACACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR TCA 90 bp | TGTCTTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTGGCCTaGGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATC | + |
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Preference number: 1 (lower is better) Translates to: CLFFSDKTDKKRTVA*AHSRLEASREALEI Trigger: GATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR CCA 90 bp | CTTGTTGTCTTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTaGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LVVFSSLTKLTRREQ*PEHTVGWKHPERPW Trigger: CCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAAGACAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGAGATCAAGGTCCCAGGAACAGCTGCAGAGGGTGGGCTCTCAGTCCATCATCCAGAGAGGCCTTaGAGATCAAGGTCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALEIKVPGTAAEGGLSVHHPERP*RSRSQE Trigger: TTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATG...ATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATCAGAGCCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCAAGAGAACAGTGGCCTaGGCACACAGTAGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: MIRALGHHLQFQPSAEHTKRTVA*AHSRLE Trigger: TTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTT...GGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGGCTCTGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACAAGAAGAGAACAGTaGCCTGAGCACACAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PWGTISSSSLVQNTPLLDTRREQ*PEHTVG Trigger: GCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGT...GTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACACAAGAAGAGAACAGTaGCCTGAGCACACAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGHHLQFQPSAEHTSARHTRREQ*PEHTVG Trigger: GCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGT...GTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR CAA 90 bp | AAGAGGTCTTTTGCCAGTAATTCAGCAAGCTTCCTGAGTGAGGAGTaGAGCTCAGAGATCCTGGGGGCTGAACCTGACAGAGGCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: KRSFASNSASFLSEE*SSEILGAEPDRGHL Trigger: CAGGTGGCCTCTGTCAGGTTCAGCCCCCAGGATCTCTGAGCTCAACTCCTCACTCAGGAAGCTTGCTGAATTACTGGCAAAAGACCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGAAGAGAACAGTGGCCTaGGCACACAGTAGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPLLDTWLCLSHEDPELRKRTVA*AHSRLE Trigger: TTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTT...CCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR GCA 90 bp | AATCCCTCAGATAAGTGTGGGTCAGAGAAAGGAGCCCAGTTAGAGCAGTCAATATGGGCTCTCAGTCCATaGCAGGAAACCACCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NPSDKCGSEKGAQLEQSIWALSP*QETTCP Trigger: TGGACAGGTGGTTTCCTGGCATGGACTGAGAGCCCA...TATTGACTGCTCTAACTGGGCTCCTTTCTCTGACCCACACTTATCTGAGGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAAGATCCAGAACTGAGGTGTGTCTCAGCTTGTTGTCTTTTCTTCTCTGACCATCCAGAGAGGCCTTaGAGATCAAGGTCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HEDPELRCVSACCLFFSDHPERP*RSRSQE Trigger: TTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATG...GTCAGAGAAGAAAAGACAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR GCA 72 bp | CAGAGATCCTGGGGGCTGAACCTGACAGAGGCCACCTaGCAGAGTCCCTACAGCCAGAGGGCAAGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: QRSWGLNLTEAT*QSPYSQRARTE Trigger: CTCTGTCCTTGCCCTCTGGCTGTAGGGACTCTGGCAGGTGGCCTCTGTCAGGTTCAGCCCCCAGGATCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR GCA 72 bp | CAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAGCTaGAGAGGGTGGGCTCTCAGTCCATGCCAGGAAACC | + |
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Preference number: 3 (lower is better) Translates to: QRGLGDQGPRNS*RGWALSPCQET Trigger: GGTTTCCTGGCATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR GCA 72 bp | CCCAGGAACAGCTGCAGAGGGTGGGCTCTCAGTCCATaGCAGGAAACCACCTGTCCACACAAGAAGCACATG | + |
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Preference number: 3 (lower is better) Translates to: PRNSCRGWALSP*QETTCPHKKHM Trigger: CATGTGCTTCTTGTGTGGACAGGTGGTTTCCTGGCATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR CCA 72 bp | GAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTaGAGATCAAGGTCCCAGGAACAGCTGCAGAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: EHTVGWKHPERP*RSRSQEQLQRV Trigger: CACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTGCATCCAGAGAGGCCTaGGAGATCAAGGTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RREQWPEHTVGWKHPERPASREA*EIKVPG Trigger: TCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGC...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR TCA 72 bp | TCAGAGAAAGGAGCCCAGTTAGAGCAGTCAATACCATaGTCAGAGCCCTGGGGCACCATCTCCAGTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SEKGAQLEQSIP*SEPWGTISSSS Trigger: GCTGGAACTGGAGATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCTTTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CAA 90 bp | ACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTTCCTGAGTGAGGAGTaGAGCTCAGAGATCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: TPLLDTWLCLSHEDPELRFLSEE*SSEILG Trigger: CCCCAGGATCTCTGAGCTCAACTCCTCACTCAGGAA...CCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR CCA 72 bp | TCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTaGCTGTGTCTCTCACATGAAGATCCAGAACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLVQNTPLLDT*LCLSHEDPELR Trigger: CCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR TCA 72 bp | TTCTCTGACAAAACTGACAAGAAGAGAACAGTGGCCTaGGCACACAGTAGGCTGGAAGCATCCAGAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FSDKTDKKRTVA*AHSRLEASREA Trigger: GGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR TCA 72 bp | CACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATaGAGATCCAGAACTGAGGTGTGTCTCAGCTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: HTSARHLAVSLT*RSRTEVCLSLL Trigger: CAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CAA 90 bp | CATGAAGATCCAGAACTGAGGTGTGTCTCAGCTTGTTGTCTTTTCTTCTCTGACGCATCCAGAGAGGCCTaGGAGATCAAGGTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HEDPELRCVSACCLFFSDASREA*EIKVPG Trigger: TCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGC...GTCAGAGAAGAAAAGACAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATACAGGAAGAGGTCTTTaGCCAGTAATTCAGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: ERSPVRAVNTMIRALGHHTGRGL*PVIQQA Trigger: AGCTTGCTGAATTACTGGCAAAAGACCTCTTCCTGT...ATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| 3UTR TCA 72 bp | ACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTaGGGTGTGTCTCAGCTTGTTGTCTTTTCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TPGCVSHMKIQN*GVSQLVVFSSL Trigger: CAGAGAAGAAAAGACAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR CCA 72 bp | TTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTaGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FSSLTKLTRREQ*PEHTVGWKHPE Trigger: CTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| 3UTR TCA 72 bp | TATGTATGCCACCCAGAAATCTTCCCTAGCCTGCAGTaGCAGTGGGCTTTATCCCTAACAGAAGTATCTATA | + |
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Preference number: 3 (lower is better) Translates to: YVCHPEIFPSLQ*QWALSLTEVSI Trigger: TATAGATACTTCTGTTAGGGATAAAGCCCACTGTCACTGCAGGCTAGGGAAGATTTCTGGGTGGCATACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCCAGGAACAGCTGCAGAGGGTGGGCTCTCAGTCCATGCCAGGAAACCACATGGCCAGTGCCCCTaGGCCCCTCCACGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KVPGTAAEGGLSVHARKPHGQCP*APPRGL Trigger: CAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATG...TGGTTTCCTGGCATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACCCTGGTCATGGCCAGTaGCCCTGGGCCCCTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: PWGTISSSSLVQNTPLLDPGHGQ*PWAPPR Trigger: TCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGG...GTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTCCTGGTCATGGCCAGTaGCCCTGGGCCCCTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: RREQWPEHTVGWKHPERPPGHGQ*PWAPPR Trigger: TCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGG...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | CCCCATGGATTCCCCAGCCAGCCACCTTCCATCCTCACTATCACAGGGATCAATTTCTGGCCCTGGTCATaGCCAGTGCCCCTGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PHGFPSQPPSILTITGINFWPWS*PVPLGP Trigger: GGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAA...ATTGATCCCTGTGATAGTGAGGATGGAAGGTGGCTGGCTGGGGAATCCATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | CCCCATGGATTCCCCAGCCAGCCACCTTCCATCCTCACTATCACAGGGATCAATCGCCTCCAGCTCCGGTaGCAGCAGCTCGAAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PHGFPSQPPSILTITGINRLQLR*QQLEVG Trigger: CCCAACTTCGAGCTGCTGTCACCGGAGCTGGAGGCG...ATTGATCCCTGTGATAGTGAGGATGGAAGGTGGCTGGCTGGGGAATCCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | GCCTTGGAGATCAAGGTCCCAGGAACAGCTGCAGAGGGTGGGCTCTCAGTCCATGTGGGCTGCCCAACCTaGGAAGCCATGACTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALEIKVPGTAAEGGLSVHVGCPT*EAMTWP Trigger: TGGCCAAGTCATGGCTTCTCAGGTTGGGCAGCCCAC...ATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | CACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAATGGCCATGGCATTaGGTGCCCCTGAGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTVGWKHPERPWRSRSQEQWPWH*VPLRRS Trigger: GCTCCTCCTCAGGGGCACTCAATGCCATGGCCATTG...TTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATCTCCACCTTCCCTGGCACTaGACACTGGACACGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSPVRAVNTMIRALGHHLHLPWH*TLDTGP Trigger: TGGACCCGTGTCCAGTGTTCAGTGCCAGGGAAGGTG...GAGATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTGTGGGCTGCCCAACCTaGGAAGCCATGACTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RREQWPEHTVGWKHPERPVGCPT*EAMTWP Trigger: TGGCCAAGTCATGGCTTCTCAGGTTGGGCAGCCCAC...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTCAGCGACCACAGCACTaGCTCCTTGGTAAGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RREQWPEHTVGWKHPERPQRPQH*LLGKSP Trigger: CGGGGACTTACCAAGGAGCCAGTGCTGTGGTCGCTG...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | CTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTGTGTCTCATTCTGGCCCTGGTCATaGCCAGTGCCCCTGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LDTWLCLSHEDPELRCVSFWPWS*PVPLGP Trigger: GGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAA...TGAGACACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATCTCGTTGGGCCAGTCTTCTaGCCCTGGTCATGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RSPVRAVNTMIRALGHHLVGPVF*PWSWPV Trigger: CACTGGCCATGACCAGGGCCAGAAGACTGGCCCAAC...GAGATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | TGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAGCTGCAGAGGCATGTAGCCAGAGCCTaGGAAGGACAGGTTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: WKHPERPWRSRSQEQLQRHVARA*EGQVPT Trigger: GGTTGGAACCTGTCCTTCTCAGGCTCTGGCTACATG...CCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | CCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTGTAGGCCGGATGGAAGATaGCCAGGCTCAGCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLLDTWLCLSHEDPELRCRPDGR*PGSAAP Trigger: TGGAGCGGCTGAGCCTGGGCATCTTCCATCCGGCCT...ACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | CACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAAATCGGGTCATGGAGATaGCCAGCCTCTGGGAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HTVGWKHPERPWRSRSQEIGSWR*PASGRL Trigger: TAGCCTCCCAGAGGCTGGGCATCTCCATGACCCGAT...TTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | ATGATCAGAGCCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCGAAGTCTCTCTTGCATaGCTTTCTCAGTGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MIRALGHHLQFQPSAEHTEVSLA*LSQCRL Trigger: GAGGCGGCACTGAGAAAGGCATGCAAGAGAGACTTC...GGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGGCTCTGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | CATGAAGATCCAGAACTGAGGTGTGTCTCAGCTTGTTGTCTTTTCTTCTCTGACCATGGCCAGTGCCCCTaGGCCCCTCCACGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HEDPELRCVSACCLFFSDHGQCP*APPRGL Trigger: CAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATG...GTCAGAGAAGAAAAGACAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGTCTTTTGCCAGTAATTCAGCAAGCTTCCTGAGTGAGGAGTTGAGCAGGCCGGATGGAAGATaGCCAGGCTCAGCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RKRSFASNSASFLSEELSRPDGR*PGSAAP Trigger: TGGAGCGGCTGAGCCTGGGCATCTTCCATCCGGCCT...GCTCAACTCCTCACTCAGGAAGCTTGCTGAATTACTGGCAAAAGACCTCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTGAAGTCTCTCTTGCATaGCTTTCTCAGTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RREQWPEHTVGWKHPERPEVSLA*LSQCRL Trigger: GAGGCGGCACTGAGAAAGGCATGCAAGAGAGACTTC...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATCTCCCAAGTCCAGGAGATTaGAGCAGGCAAAGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPVRAVNTMIRALGHHLPSPGD*SRQSLQ Trigger: CTGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGG...GAGATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | ACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGCATGTAGCCAGAGCCTaGGAAGGACAGGTTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: TPLLDTWLCLSHEDPELRHVARA*EGQVPT Trigger: GGTTGGAACCTGTCCTTCTCAGGCTCTGGCTACATG...CCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | GTTGTCTTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTGGCCTGAGCACCGCCTCCAGCTCCGGTaGCAGCAGCTCGAAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVFSSLTKLTRREQWPEHRLQLR*QQLEVG Trigger: CCCAACTTCGAGCTGCTGTCACCGGAGCTGGAGGCG...GTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAAGACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | TGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAGCTGCAGAGGGGAGCAGGCAAAGTCTaGAGACTTGCCAAAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: WKHPERPWRSRSQEQLQRGAGKV*RLAKDN Trigger: ATTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCTCC...CCTCTGCAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | AATCCCTCAGATAAGTGTGGGTCAGAGAAAGGAGCCCAGTTAGAGCAGTCAATACAATGGCCATGGCATTaGGTGCCCCTGAGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPSDKCGSEKGAQLEQSIQWPWH*VPLRRS Trigger: GCTCCTCCTCAGGGGCACTCAATGCCATGGCCATTG...TATTGACTGCTCTAACTGGGCTCCTTTCTCTGACCCACACTTATCTGAGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | TCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATAGATCAGAGCCTGGATaGATTCATCCCGAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVQNTPLLDTWLCLSHRSEPG*IHPEWQ Trigger: TTGCCACTCGGGATGAATTCATCCAGGCTCTGATCT...ATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
||
| CDS-3UTR TCA 90 bp | CCCCATGGATTCCCCAGCCAGCCACCTTCCATCCTCACTATCACAGGGATCAATAGTTGGGCACATCCTTaGCTAGCACATTGGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PHGFPSQPPSILTITGINSWAHP*LAHWEC Trigger: ACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACT...ATTGATCCCTGTGATAGTGAGGATGGAAGGTGGCTGGCTGGGGAATCCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | GCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGATTCCTGGTAGAGATCTaGAAACTGGCATTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSRLEASREALEIKVPGFLVEI*KLALKA Trigger: TGCCTTCAATGCCAGTTTCCAGATCTCTACCAGGAA...TCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATGGAGCAGGCAAAGTCTaGAGACTTGCCAAAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERSPVRAVNTMIRALGHHGAGKV*RLAKDN Trigger: ATTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCTCC...ATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCTTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTGGCCTGAGCACGTTGGGCCAGTCTTCTaGCCCTGGTCATGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVFSSLTKLTRREQWPEHVGPVF*PWSWPV Trigger: CACTGGCCATGACCAGGGCCAGAAGACTGGCCCAAC...GTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAAGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | GTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAGCTGCTCAAAAAGACTATGTaGTATGTTCTGGGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGWKHPERPWRSRSQEQLLKKTM*YVLGTD Trigger: ATCTGTCCCCAGAACATATCACATAGTCTTTTTGAG...CAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTCAAAAAGACTATGTaGTATGTTCTGGGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGHHLQFQPSAEHTSARHLKKTM*YVLGTD Trigger: ATCTGTCCCCAGAACATATCACATAGTCTTTTTGAG...GTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
||
| CDS-3UTR TCA 90 bp | GGGATCAATCCCTCAGATAAGTGTGGGTCAGAGAAAGGAGCCCAGTTAGAGCAGAGTTGGGCACATCCTTaGCTAGCACATTGGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GINPSDKCGSEKGAQLEQSWAHP*LAHWEC Trigger: ACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACT...CTGCTCTAACTGGGCTCCTTTCTCTGACCCACACTTATCTGAGGGATTGATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTGTTCTGGAAACTGGCATTaGAGGCAGTTAGCTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLDTWLCLSHEDPELRCSGNWH*RQLAQK Trigger: TTTTTGAGCTAACTGCCTTCAATGCCAGTTTCCAGA...ACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCTTTTCTTCTCTGACAAAACTGACAAGAAGAGAACAGTGGCCTGAGCACCCAAGTCCAGGAGATTaGAGCAGGCAAAGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVFSSLTKLTRREQWPEHPSPGD*SRQSLQ Trigger: CTGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGG...GTGCTCAGGCCACTGTTCTCTTCTTGTCAGTTTTGTCAGAGAAGAAAAGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CCA 90 bp | CATGAAGATCCAGAACTGAGGTGTGTCTCAGCTTGTTGTCTTTTCTTCTCTGACTTCCTGGTAGAGATCTaGAAACTGGCATTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HEDPELRCVSACCLFFSDFLVEI*KLALKA Trigger: TGCCTTCAATGCCAGTTTCCAGATCTCTACCAGGAA...GTCAGAGAAGAAAAGACAACAAGCTGAGACACACCTCAGTTCTGGATCTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 90 bp | CTGTGGTTCAAGGGCCTGTTCCCAGAAGGAGCTGTCCCCCGCTGCTaGCGGAGGAGACCGGAGTCTGCTCGGGTGCCAGGTGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWFKGLFPEGAVPRC*RRRPESARVPGGLP Trigger: GGGCAGCCCACCTGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCTCCTTCTGGGAACAGGCCCTTGAACCACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 90 bp | CACCTGTGGTTCAAGGGCCTGTTCCCAGAAGGAGCTGTCCCCCGCTaGTGCCGGAGGAGACCGGAGTCTGCTCGGGTGCCAGGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLWFKGLFPEGAVPR*CRRRPESARVPGGL Trigger: CAGCCCACCTGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCTCCTTCTGGGAACAGGCCCTTGAACCACAGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019012.4 |
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| CDS GCA 90 bp | AACCTGTGGTTCAAGGGCCTGTTCCCAGAAGGAGCTGTCCCCCGCTaGTGCCGGAGGAGACCGGAGTCTGCTCGGGTGCCAGGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLWFKGLFPEGAVPR*CRRRPESARVPGGL Trigger: CAGCCCACCTGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCTCCTTCTGGGAACAGGCCCTTGAACCACAGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
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| CDS CCA 90 bp | GGAATGTCCCACCTGACAGTTGGGCCAGTCTTCTGGCCCTGGTCATaGCCAGTGCCCCTGGGCCCCTCCACGAGGGCTGGAGGCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GMSHLTVGPVFWPWS*PVPLGPSTRAGGSL Trigger: TAAGGAGCCTCCAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAAGACTGGCCCAACTGTCAGGTGGGACATTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 90 bp | CTCCACGAGGGCTGGAGGCTCCTTAGATACCAGCGACCACAGCACTaGCTCCTTGGTAAGTCCCCGTCTCTCCAGGAACCTCAGGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHEGWRLLRYQRPQH*LLGKSPSLQEPQGV Trigger: GACGCCCTGAGGTTCCTGGAGAGACGGGGACTTACCAAGGAGCCAGTGCTGTGGTCGCTGGTATCTAAGGAGCCTCCAGCCCTCGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 90 bp | GTCTGCAGACTTGCCAAAGACAATGGCCATGGCATTGAGTGCCCCTaGGGAGGAGCCATAGAAGCGGCGGGCACCCTGGATGAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCRLAKDNGHGIECP*GGAIEAAGTLDEAR Trigger: CCTCGCCTCATCCAGGGTGCCCGCCGCTTCTATGGCTCCTCCTCAGGGGCACTCAATGCCATGGCCATTGTCTTTGGCAAGTCTGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACTCGGAGAAGGGCAGGTaGTTGCTCAGAGCCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PWGTISSSSLVQNTPLLDSEKGR*LLRAPS Trigger: TGACGGGGCTCTGAGCAACAACCTGCCCTTCTCCGA...GTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 90 bp | ACACTGGGTGACACCCACGTGGTAGAGGCCCATGTAGCCAGAGCCTaGGAAGGACAGGTTCCAACCTCCCTCTGCCTCCAGGAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLGDTHVVEAHVARA*EGQVPTSLCLQEVH Trigger: ATGGACTTCCTGGAGGCAGAGGGAGGTTGGAACCTGTCCTTCTCAGGCTCTGGCTACATGGGCCTCTACCACGTGGGTGTCACCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 90 bp | AGCAGGCAAAGTCTGCAGACTTGCCAAAGACAATGGCCATGGCATTaGGTGCCCCTGAGGAGGAGCCATAGAAGCGGCGGGCACCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRQSLQTCQRQWPWH*VPLRRSHRSGGHPG Trigger: TCCAGGGTGCCCGCCGCTTCTATGGCTCCTCCTCAGGGGCACTCAATGCCATGGCCATTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACAATGGCCATGGCATaGAGTGCCCCTGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWGTISSSSLVQNTPLLDTMAMA*SAPEEE Trigger: CTCCTCCTCAGGGGCACTCAATGCCATGGCCATTGT...GTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCCCAGTTAGAGCAGTCAATACCATGATCAGAGCCCTGGGGCACCATCTCCACAGCACTGGCTCCTaGGTAAGTCCCCGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPVRAVNTMIRALGHHLHSTGS*VSPRLS Trigger: GGAGAGACGGGGACTTACCAAGGAGCCAGTGCTGTG...GAGATGGTGCCCCAGGGCTCTGATCATGGTATTGACTGCTCTAACTGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 90 bp | AATCCAAGTCATCTGGAGCCTCGGGTAGCCACTCCATCAGCCTCCTaGTCCGGAAGTAGGCATACTCGAAGGGCAGTGTACAGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NPSHLEPRVATPSAS*SGSRHTRRAVYRAV Trigger: TACTGCCCTGTACACTGCCCTTCGAGTATGCCTACTTCCGGAGCAGGAGGCTGATGGAGTGGCTACCCGAGGCTCCAGATGACTTGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTGAGAAGGGCAGGTTGTaGCTCAGAGCCCCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RREQWPEHTVGWKHPERPEKGRL*LRAPSM Trigger: CATTGACGGGGCTCTGAGCAACAACCTGCCCTTCTC...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | TCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATCACAGCACTGGCTCCTaGGTAAGTCCCCGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLVQNTPLLDTWLCLSHHSTGS*VSPRLS Trigger: GGAGAGACGGGGACTTACCAAGGAGCCAGTGCTGTG...ATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCTGGAAGCATCCAGAGAGGCCTTGGAGATCAAGGTCCCAGGAACAGCTGGACAGCAGCTCGAAGTaGGGCACATCCTTGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGWKHPERPWRSRSQEQLDSSSK*GTSLTS Trigger: GCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTC...CAGCTGTTCCTGGGACCTTGATCTCCAAGGCCTCTCTGGATGCTTCCAGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 90 bp | TGCCCAGGCTCAGCCGCTCCACAAGTTTCACCAAGTCCAGGAGATTaGAGCAGGCAAAGTCTGCAGACTTGCCAAAGACAATGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CPGSAAPQVSPSPGD*SRQSLQTCQRQWPW Trigger: CCATGGCCATTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGGTGAAACTTGTGGAGCGGCTGAGCCTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | TCCAGCCTAGTGCAGAACACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATACAATGGCCATGGCATaGAGTGCCCCTGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLVQNTPLLDTWLCLSHTMAMA*SAPEEE Trigger: CTCCTCCTCAGGGGCACTCAATGCCATGGCCATTGT...ATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACACCAAGTCCAGGAGATaGGAGCAGGCAAAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGHHLQFQPSAEHTSARHTKSRR*EQAKSA Trigger: TGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGGT...GTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | ACACCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTCGGAGAAGGGCAGGTaGTTGCTCAGAGCCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPLLDTWLCLSHEDPELRSEKGR*LLRAPS Trigger: TGACGGGGCTCTGAGCAACAACCTGCCCTTCTCCGA...CCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAACAGTGGCCTGAGCACACAGTAGGCTGGAAGCATCCAGAGAGGCCTACCAAGTCCAGGAGATaGGAGCAGGCAAAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RREQWPEHTVGWKHPERPTKSRR*EQAKSA Trigger: TGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGGT...AGGCCTCTCTGGATGCTTCCAGCCTACTGTGTGCTCAGGCCACTGTTCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTAGACACCTGGCTGTGTCTCTCACATGAAGATCCAGAACTGAGGTGTGAGAAGGGCAGGTTGTaGCTCAGAGCCCCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PLLDTWLCLSHEDPELRCEKGRL*LRAPSM Trigger: CATTGACGGGGCTCTGAGCAACAACCTGCCCTTCTC...ACACCTCAGTTCTGGATCTTCATGTGAGAGACACAGCCAGGTGTCTAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCAATCCCTCAGATAAGTGTGGGTCAGAGAAAGGAGCCCAGTTAGAGCAGGACAGCAGCTCGAAGTaGGGCACATCCTTGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GINPSDKCGSEKGAQLEQDSSSK*GTSLTS Trigger: GCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTC...CTGCTCTAACTGGGCTCCTTTCTCTGACCCACACTTATCTGAGGGATTGATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCCAGGAACAGCTGCAGAGGGTGGGCTCTCAGTCCATGCCAGGAAACCAATCTGGAAACTGGCATaGAAGGCAGTTAGCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KVPGTAAEGGLSVHARKPIWKLA*KAVSSK Trigger: TTTTGAGCTAACTGCCTTCAATGCCAGTTTCCAGAT...TGGTTTCCTGGCATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230566.2 |
||
| CDS-3UTR CAA 90 bp | ATGATCAGAGCCCTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCATCTGGAAACTGGCATaGAAGGCAGTTAGCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MIRALGHHLQFQPSAEHTIWKLA*KAVSSK Trigger: TTTTGAGCTAACTGCCTTCAATGCCAGTTTCCAGAT...GGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAGGGCTCTGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
||
| CDS TCA 90 bp | CTAGAATATGGCAGTTGTCAGGAAGATTTTCATACAGCTTTTTCCTaGTGTGTTCAGCGGGTCCGTAGGCCGGATGGAAGATGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEYGSCQEDFHTAFS*CVQRVRRPDGRCPG Trigger: GCCTGGGCATCTTCCATCCGGCCTACGGACCCGCTGAACACATCAGGAAAAAGCTGTATGAAAATCTTCCTGACAACTGCCATATTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 90 bp | AAATTCTTGCCATCAGGCCATCGGGTCATGGAGATGCCCAGCCTCTaGGAGGCTAGAATATGGCAGTTGTCAGGAAGATTTTCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KFLPSGHRVMEMPSL*EARIWQLSGRFSYS Trigger: GCTGTATGAAAATCTTCCTGACAACTGCCATATTCTAGCCTCCCAGAGGCTGGGCATCTCCATGACCCGATGGCCTGATGGCAAGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCACCATCTCCAGTTCCAGCCTAGTGCAGAACACACCTCTGCTAGACACGCTAGAATATGGCAGTaGTCAGGAAGATTTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: LGHHLQFQPSAEHTSARHARIWQ*SGRFSY Trigger: GTATGAAAATCTTCCTGACAACTGCCATATTCTAGC...GTGTCTAGCAGAGGTGTGTTCTGCACTAGGCTGGAACTGGAGATGGTGCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 90 bp | CTGGCATTGAAGGCAGTTAGCTCAAAAAGACTATGTGATATGTTCTaGGGACAGATGTCCACTGTCCCGTTGAAAGGAGAGACGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: LALKAVSSKRLCDMF*GQMSTVPLKGETVM Trigger: CATTACCGTCTCTCCTTTCAACGGGACAGTGGACATCTGTCCCCAGAACATATCACATAGTCTTTTTGAGCTAACTGCCTTCAATGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | CAGTTGGGCCAGTCTTCTGGCCCTGGTCATGGCCAGTaGCCCTGGGCCCCTCCACGAGGGCTGGAGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QLGQSSGPGHGQ*PWAPPRGLEAP Trigger: AGGAGCCTCCAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAAGACTGGCCCAACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | AGCTGTCCCCCGCTGCTGCCGGAGGAGACCGGAGTCTaGTCGGGTGCCAGGTGGGCTGCCCAACCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SCPPLLPEETGV*SGARWAAQPEK Trigger: CTTCTCAGGTTGGGCAGCCCACCTGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | AAGGGCCTGTTCCCAGAAGGAGCTGTCCCCCGCTGCTaGCGGAGGAGACCGGAGTCTGCTCGGGTGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KGLFPEGAVPRC*RRRPESARVPG Trigger: ACCTGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCTCCTTCTGGGAACAGGCCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | CACCTGACAGTTGGGCCAGTCTTCTGGCCCTGGTCATaGCCAGTGCCCCTGGGCCCCTCCACGAGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HLTVGPVFWPWS*PVPLGPSTRAG Trigger: TCCAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAAGACTGGCCCAACTGTCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | TTCAAGGGCCTGTTCCCAGAAGGAGCTGTCCCCCGCTaGTGCCGGAGGAGACCGGAGTCTGCTCGGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FKGLFPEGAVPR*CRRRPESARVP Trigger: TGGCACCCGAGCAGACTCCGGTCTCCTCCGGCAGCAGCGGGGGACAGCTCCTTCTGGGAACAGGCCCTTGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | GTCATGGCCAGTGCCCCTGGGCCCCTCCACGAGGGCTaGAGGCTCCTTAGATACCAGCGACCACAGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: VMASAPGPLHEG*RLLRYQRPQHW Trigger: CCAGTGCTGTGGTCGCTGGTATCTAAGGAGCCTCCAGCCCTCGTGGAGGGGCCCAGGGGCACTGGCCATGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | ATGTCCCACCTGACAGTTGGGCCAGTCTTCTGGCCCTaGTCATGGCCAGTGCCCCTGGGCCCCTCCACGAGG | + |
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Preference number: 6 (lower is better) Translates to: MSHLTVGPVFWP*SWPVPLGPSTR Trigger: CCTCGTGGAGGGGCCCAGGGGCACTGGCCATGACCAGGGCCAGAAGACTGGCCCAACTGTCAGGTGGGACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 72 bp | TCGGGTGCCAGGTGGGCTGCCCAACCTGAGAAGCCATaGCTTGGCCATGGAGTAGACCTCGAGGGTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: SGARWAAQPEKP*LGHGVDLEGGT Trigger: AGTACCACCCTCGAGGTCTACTCCATGGCCAAGTCATGGCTTCTCAGGTTGGGCAGCCCACCTGGCACCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | CCGTCTCTCCAGGAACCTCAGGGCGTCCAGGTAACCTaGTCGGCAATGGTCAGCTACCACCTCAGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSLQEPQGVQVT*SAMVSYHLRLG Trigger: CCCAAGCCTGAGGTGGTAGCTGACCATTGCCGACAAGGTTACCTGGACGCCCTGAGGTTCCTGGAGAGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | GGCTCCTTAGATACCAGCGACCACAGCACTGGCTCCTaGGTAAGTCCCCGTCTCTCCAGGAACCTCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: GSLDTSDHSTGS*VSPRLSRNLRA Trigger: CGCCCTGAGGTTCCTGGAGAGACGGGGACTTACCAAGGAGCCAGTGCTGTGGTCGCTGGTATCTAAGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 90 bp | GCCGCCTCCAGCTCCGGTGACAGCAGCTCGAAGTTGGGCACATCCTaGACTAGCACATTGGGAATGTCCCACCTGACAGTTGGGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: AASSSGDSSSKLGTS*TSTLGMSHLTVGPV Trigger: GACTGGCCCAACTGTCAGGTGGGACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTCACCGGAGCTGGAGGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | GCACTGAACACTGGACACGGGTCCAGAAGTCTCTCTTaGATGCCTTTCTCAGTGCCGCCTCCAGCTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: ALNTGHGSRSLS*MPFSVPPPAPV Trigger: CACCGGAGCTGGAGGCGGCACTGAGAAAGGCATGCAAGAGAGACTTCTGGACCCGTGTCCAGTGTTCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | CATCTGGAGCCTCGGGTAGCCACTCCATCAGCCTCCTaGTCCGGAAGTAGGCATACTCGAAGGGCAGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: HLEPRVATPSAS*SGSRHTRRAVY Trigger: GTACACTGCCCTTCGAGTATGCCTACTTCCGGAGCAGGAGGCTGATGGAGTGGCTACCCGAGGCTCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | GGCTGGAGGCTCCTTAGATACCAGCGACCACAGCACTaGCTCCTTGGTAAGTCCCCGTCTCTCCAGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: GWRLLRYQRPQH*LLGKSPSLQEP Trigger: AGGTTCCTGGAGAGACGGGGACTTACCAAGGAGCCAGTGCTGTGGTCGCTGGTATCTAAGGAGCCTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | ACGGTAATGGTGGTGGGGCAATCGGAGAAGGGCAGGTaGTTGCTCAGAGCCCCGTCAATGAAGCGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TVMVVGQSEKGR*LLRAPSMKRWP Trigger: AGGCCAGCGCTTCATTGACGGGGCTCTGAGCAACAACCTGCCCTTCTCCGATTGCCCCACCACCATTACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 90 bp | AAAGGAGAGACGGTAATGGTGGTGGGGCAATCGGAGAAGGGCAGGTaGTTGCTCAGAGCCCCGTCAATGAAGCGCTGGCCTCTGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: KGETVMVVGQSEKGR*LLRAPSMKRWPLNA Trigger: GGCATTCAGAGGCCAGCGCTTCATTGACGGGGCTCTGAGCAACAACCTGCCCTTCTCCGATTGCCCCACCACCATTACCGTCTCTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 90 bp | TCCGGTGACAGCAGCTCGAAGTTGGGCACATCCTTGACTAGCACATaGGGAATGTCCCACCTGACAGTTGGGCCAGTCTTCTGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGDSSSKLGTSLTST*GMSHLTVGPVFWPW Trigger: CCAGGGCCAGAAGACTGGCCCAACTGTCAGGTGGGACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTCACCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 90 bp | GCCTTTCTCAGTGCCGCCTCCAGCTCCGGTGACAGCAGCTCGAAGTaGGGCACATCCTTGACTAGCACATTGGGAATGTCCCACCTGACA | + |
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Preference number: 6 (lower is better) Translates to: AFLSAASSSGDSSSK*GTSLTSTLGMSHLT Trigger: TGTCAGGTGGGACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTCACCGGAGCTGGAGGCGGCACTGAGAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 72 bp | AGTCTGCAGACTTGCCAAAGACAATGGCCATGGCATTaGGTGCCCCTGAGGAGGAGCCATAGAAGCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SLQTCQRQWPWH*VPLRRSHRSGG Trigger: CCCGCCGCTTCTATGGCTCCTCCTCAGGGGCACTCAATGCCATGGCCATTGTCTTTGGCAAGTCTGCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | AGTGCCGCCTCCAGCTCCGGTGACAGCAGCTCGAAGTaGGGCACATCCTTGACTAGCACATTGGGAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: SAASSSGDSSSK*GTSLTSTLGMS Trigger: GGACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACTTCGAGCTGCTGTCACCGGAGCTGGAGGCGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | AGCAGCTCGAAGTTGGGCACATCCTTGACTAGCACATaGGGAATGTCCCACCTGACAGTTGGGCCAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSKLGTSLTST*GMSHLTVGPVF Trigger: GAAGACTGGCCCAACTGTCAGGTGGGACATTCCCAATGTGCTAGTCAAGGATGTGCCCAACTTCGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | TCATCCCGAGTGGCAAAATCGGTGACTATGAAATTCTaGCCATCAGGCCATCGGGTCATGGAGATGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRVAKSVTMKF*PSGHRVMEMPS Trigger: GCTGGGCATCTCCATGACCCGATGGCCTGATGGCAAGAATTTCATAGTCACCGATTTTGCCACTCGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 90 bp | TGGATGAATTCATCCCGAGTGGCAAAATCGGTGACTATGAAATTCTaGCCATCAGGCCATCGGGTCATGGAGATGCCCAGCCTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WMNSSRVAKSVTMKF*PSGHRVMEMPSLWE Trigger: CTCCCAGAGGCTGGGCATCTCCATGACCCGATGGCCTGATGGCAAGAATTTCATAGTCACCGATTTTGCCACTCGGGATGAATTCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | TCAGCCGCTCCACAAGTTTCACCAAGTCCAGGAGATTaGAGCAGGCAAAGTCTGCAGACTTGCCAAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SAAPQVSPSPGD*SRQSLQTCQRQ Trigger: TTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGGTGAAACTTGTGGAGCGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS TCA 72 bp | GGCAGTTGTCAGGAAGATTTTCATACAGCTTTTTCCTaGTGTGTTCAGCGGGTCCGTAGGCCGGATGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GSCQEDFHTAFS*CVQRVRRPDGR Trigger: TCTTCCATCCGGCCTACGGACCCGCTGAACACATCAGGAAAAAGCTGTATGAAAATCTTCCTGACAACTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS GCA 72 bp | TTTCACCAAGTCCAGGAGATTGGAGCAGGCAAAGTCTaGAGACTTGCCAAAGACAATGGCCATGGCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: FHQVQEIGAGKV*RLAKDNGHGIE Trigger: CTCAATGCCATGGCCATTGTCTTTGGCAAGTCTGCAGACTTTGCCTGCTCCAATCTCCTGGACTTGGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | GAGATGCCCAGCCTCTGGGAGGCTAGAATATGGCAGTaGTCAGGAAGATTTTCATACAGCTTTTTCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: EMPSLWEARIWQ*SGRFSYSFFLM Trigger: CATCAGGAAAAAGCTGTATGAAAATCTTCCTGACAACTGCCATATTCTAGCCTCCCAGAGGCTGGGCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CCA 72 bp | AAGGCAGTTAGCTCAAAAAGACTATGTGATATGTTCTaGGGACAGATGTCCACTGTCCCGTTGAAAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KAVSSKRLCDMF*GQMSTVPLKGE Trigger: CTCTCCTTTCAACGGGACAGTGGACATCTGTCCCCAGAACATATCACATAGTCTTTTTGAGCTAACTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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| CDS CAA 72 bp | CTAAAGAAGTTCCTGGTAGAGATCTGGAAACTGGCATaGAAGGCAGTTAGCTCAAAAAGACTATGTGATATG | + |
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Preference number: 6 (lower is better) Translates to: LKKFLVEIWKLA*KAVSSKRLCDM Trigger: CATATCACATAGTCTTTTTGAGCTAACTGCCTTCAATGCCAGTTTCCAGATCTCTACCAGGAACTTCTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019012.4 ENSMUST00000230566.2 |
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