Pregenerated sensors for PNPLA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043286Ensembl transcript IDs: ENSMUST00000056866.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGGTGCTCAGTTTCAAAGCCAGCATTTGAGGTAAGCACATGCTaGTGTGGCCTGTGGTATGGGCCTGGCTGGGCTGGAGCAATGGGG | + |
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Preference number: 1 (lower is better) Translates to: WRCSVSKPAFEVSTC*CGLWYGPGWAGAMG Trigger: CCCCATTGCTCCAGCCCAGCCAGGCCCATACCACAGGCCACACCAGCATGTGCTTACCTCAAATGCTGGCTTTGAAACTGAGCACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | CGCCTTGCAGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTaGCAAAACATGCCCTCCTTCCCAACGTCAGCGACCAAGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: RLAASCRVHFLHSRL*QNMPSFPTSATKRL Trigger: GAGTCTCTTGGTCGCTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTGCAAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | CCTGGCTGGGCTGGAGCAATGGGGACCACCTTCTGCAAGACAGGCTaGAGATTGAGGCTTAGAGTGAGACCCATCTTCCAAATCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: PGWAGAMGTTFCKTG*RLRLRVRPIFQILA Trigger: GGCTAGGATTTGGAAGATGGGTCTCACTCTAAGCCTCAATCTCCAGCCTGTCTTGCAGAAGGTGGTCCCCATTGCTCCAGCCCAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | CTCCTGACCCTTCTCACATGGCCCACCTCAGGGTCACATTCACTCTaGGCTCACAGATGGCTCTGGCTATTTTCTCCCATGTGTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LLTLLTWPTSGSHSL*AHRWLWLFSPMCLQ Trigger: TTGAAGACACATGGGAGAAAATAGCCAGAGCCATCTGTGAGCCCAGAGTGAATGTGACCCTGAGGTGGGCCATGTGAGAAGGGTCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | TTTACCCTTTACATCTGGTTCTCTTGGCTCCTGACCCTTCTCACATaGCCCACCTCAGGGTCACATTCACTCTGGGCTCACAGATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FTLYIWFSWLLTLLT*PTSGSHSLWAHRWL Trigger: GAGCCATCTGTGAGCCCAGAGTGAATGTGACCCTGAGGTGGGCCATGTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTAAAGGGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | TACAGTCAAGATGTTCTTAGGAATGCCTTAACAACAGCCCTGCCCTaGCATGCCTGGGGGCTGTTCTGCTTTGTTCTCAGTCCCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YSQDVLRNALTTALP*HAWGLFCFVLSPRQ Trigger: CTGCCTGGGACTGAGAACAAAGCAGAACAGCCCCCAGGCATGCCAGGGCAGGGCTGTTGTTAAGGCATTCCTAAGAACATCTTGACTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR TCA 90 bp | ATTGTGTCCCTCCTCCCAGATGGATGGACTATGAGTGGTATGTGTTaGTGTCTGCCTGTCCATCCAGAGCAGAATGGTGGGAGGATAGCA | + |
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Preference number: 1 (lower is better) Translates to: IVSLLPDGWTMSGMC*CLPVHPEQNGGRIA Trigger: TGCTATCCTCCCACCATTCTGCTCTGGATGGACAGGCAGACATCAACACATACCACTCATAGTCCATCCATCTGGGAGGAGGGACACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | CAAAAGCAGGATTGTGTCCCTCCTCCCAGATGGATGGACTATGAGTaGTATGTGTTGATGTCTGCCTGTCCATCCAGAGCAGAATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QKQDCVPPPRWMDYE*YVLMSACPSRAEWW Trigger: CCACCATTCTGCTCTGGATGGACAGGCAGACATCAACACATACCACTCATAGTCCATCCATCTGGGAGGAGGGACACAATCCTGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR GCA 90 bp | CATGTAGGCAGGAGGTACATAAACAGGAAGTACAGTCAGGATGTATaGTTGCCCCCTGATTGGACAAAAGCAGGATTGTGTCCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: HVGRRYINRKYSQDV*LPPDWTKAGLCPSS Trigger: GGAGGAGGGACACAATCCTGCTTTTGTCCAATCAGGGGGCAAGCATACATCCTGACTGTACTTCCTGTTTATGTACCTCCTGCCTACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | GGCTGCCCTTCCCCCAGCTGCTCTTCCCTATATAATCCAGCCATTTaGCTACATGTTTATTTTACCCTTTACATCTGGTTCTCTTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GCPSPSCSSLYNPAI*LHVYFTLYIWFSWL Trigger: GAGCCAAGAGAACCAGATGTAAAGGGTAAAATAAACATGTAGCCAAATGGCTGGATTATATAGGGAAGAGCAGCTGGGGGAAGGGCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CCA 90 bp | TATAATCCAGCCATTTGGCTACATGTTTATTTTACCCTTTACATCTaGTTCTCTTGGCTCCTGACCCTTCTCACATGGCCCACCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: YNPAIWLHVYFTLYI*FSWLLTLLTWPTSG Trigger: CCCTGAGGTGGGCCATGTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTAAAGGGTAAAATAAACATGTAGCCAAATGGCTGGATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR TCA 90 bp | TTAAACTCACAAGTTACAATATTTTATCTTTCTTCAGTACTATCCTaGCAAAGCAAGGAGATCCTGGTGGTGGACTTTATAAGCTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LNSQVTIFYLSSVLS*QSKEILVVDFISSD Trigger: GTCTGAGCTTATAAAGTCCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATATTGTAACTTGTGAGTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 90 bp | CCGCCTTGCAGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTaGGCAAAACATGCCCTCCTTCCCAACGTCAGCGACCAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: PPCSKLQGTLSSQPP*AKHALLPNVSDQET Trigger: AGTCTCTTGGTCGCTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTGCAAGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCAAGTGTGCCACCTGCCTAGAATCTGGTCTATTTGTGCCTGTATCTGCTGTAGCACTGGATGGCTaGGGGCACCCCTGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGKCATCLESGLFVPVSAVALDG*GHPWSQ Trigger: TTGGGACCAGGGGTGCCCTCAGCCATCCAGTGCTAC...AGCAGATACAGGCACAAATAGACCAGATTCTAGGCAGGTGGCACACTTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCGGCTACACCGCCTTGCAGCAAGCTaGAGGGTACACTTTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PSLSHIKPHLPSGCRRLHRLAAS*RVHFLH Trigger: GTGAAGAAAGTGTACCCTGCAGCTTGCTGCAAGGCG...GTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGTTAATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCCCTCGGGTGGAAGGCTaGACCCAGGTCACTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LVNFSPSLSHIKPHLPSGPRVEG*TQVTGV Trigger: GACCCCAGTGACCTGGGTCCAGCCTTCCACCCGAGG...GCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATTAACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCCTGTGGTATGGGCCTaGCTGGGCTGGAGCAATGGG | + |
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Preference number: 2 (lower is better) Translates to: NFSPSLSHIKPHLPSGCRPVVWA*LGWSNG Trigger: CCCATTGCTCCAGCCCAGCCAGGCCCATACCACAGG...CCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTGGTTCTCTTGGCTCCTaGCCCTTCTCACATGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QQAAGYTFFTAAFGKTCPGSLGS*PFSHGP Trigger: TGGGCCATGTGAGAAGGGTCAGGAGCCAAGAGAACC...AGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTTTCTGTAGCACTGGATaGCTGAGGGCACCCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FQILARVTPPCSKLQGTLFCSTG*LRAPLV Trigger: GACCAGGGGTGCCCTCAGCCATCCAGTGCTACAGAA...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCTACCATGAACTCTCCAGCATAGGTGCTGGGCTGCCCTTCCCCCAGCTGTTTACCCTTTACATCTaGTTCTCTTGGCTCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: GLYHELSSIGAGLPFPQLFTLYI*FSWLLT Trigger: GGTCAGGAGCCAAGAGAACCAGATGTAAAGGGTAAA...CAGCTGGGGGAAGGGCAGCCCAGCACCTATGCTGGAGAGTTCATGGTAGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 90 bp | TGGGCTGGAGCAATGGGGACCACCTTCTGCAAGACAGGCTGGAGATaGAGGCTTAGAGTGAGACCCATCTTCCAAATCCTAGCCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: WAGAMGTTFCKTGWR*RLRVRPIFQILARV Trigger: CACTCTGGCTAGGATTTGGAAGATGGGTCTCACTCTAAGCCTCAATCTCCAGCCTGTCTTGCAGAAGGTGGTCCCCATTGCTCCAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGTTAATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGTGCCTGTATCTGCTaGGCCTGTGGTCCAGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: LVNFSPSLSHIKPHLPSGCACIC*ACGPVA Trigger: GGCGACTGGACCACAGGCTCAGCAGATACAGGCACA...GCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATTAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCGGCTACACTGCTTGCCCCCTGATTaGACAAAAGCAGGATTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSLSHIKPHLPSGCRRLHCLPPD*TKAGLC Trigger: ACACAATCCTGCTTTTGTCCAATCAGGGGGCAAGCA...GTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTTGTGCCTGTATCTGCTGAGCCTGTGGTCCAGTCGCCAGGACTGGTTAACGGGTCACATTCACTCTaGGCTCACAGATGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LFVPVSAEPVVQSPGLVNGSHSL*AHRWLW Trigger: CCAGAGCCATCTGTGAGCCCAGAGTGAATGTGACCC...GTTAACCAGTCCTGGCGACTGGACCACAGGCTCAGCAGATACAGGCACAAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGAGTGAGACCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCCTGACCCTTCTCACATaGCCCACCTCAGGGTCACAT | + |
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Preference number: 2 (lower is better) Translates to: LRVRPIFQILARVTPPCSLTLLT*PTSGSH Trigger: ATGTGACCCTGAGGTGGGCCATGTGAGAAGGGTCAG...GCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGGTCTCACTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 90 bp | GATTGTGTCCCTCCTCCCAGATGGATGGACTATGAGTGGTATGTGTaGATGTCTGCCTGTCCATCCAGAGCAGAATGGTGGGAGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: DCVPPPRWMDYEWYV*MSACPSRAEWWEDS Trigger: GCTATCCTCCCACCATTCTGCTCTGGATGGACAGGCAGACATCAACACATACCACTCATAGTCCATCCATCTGGGAGGAGGGACACAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACACTCCAGCATAGGTGCTaGGCTGCCCTTCCCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTLQHRC*AALPPA Trigger: AGCTGGGGGAAGGGCAGCCCAGCACCTATGCTGGAG...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACATGCTGGTGTGGCCTGTaGTATGGGCCTGGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTCWCGL*YGPGWA Trigger: AGCCCAGCCAGGCCCATACCACAGGCCACACCAGCA...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 90 bp | GTAGGCAGGAGGTACATAAACAGGAAGTACAGTCAGGATGTATGCTaGCCCCCTGATTGGACAAAAGCAGGATTGTGTCCCTCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VGRRYINRKYSQDVC*PPDWTKAGLCPSSQ Trigger: CTGGGAGGAGGGACACAATCCTGCTTTTGTCCAATCAGGGGGCAAGCATACATCCTGACTGTACTTCCTGTTTATGTACCTCCTGCCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAGTGAGACCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCGTCAGGATGTATGCTTaGCCCCTGATTGGACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LRVRPIFQILARVTPPCSVRMYA*PLIGQK Trigger: CTTTTGTCCAATCAGGGGGCAAGCATACATCCTGAC...GCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGGTCTCACTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGGTTAACACCAGGTCTTaGGTGCTCCTTTGTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NFSPSLSHIKPHLPSGCRVNTRS*VLLCSQ Trigger: CTGAGAACAAAGGAGCACTCAAGACCTGGTGTTAAC...CCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACACAGGCTGGCCTTCCCTaGGCCTCTACCATGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTQAGLP*ASTMNS Trigger: AGAGTTCATGGTAGAGGCCCAGGGAAGGCCAGCCTG...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACAGCTGGGCTGGAGCAATaGGGACCACCTTCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTAGLEQ*GPPSAR Trigger: TCTTGCAGAAGGTGGTCCCCATTGCTCCAGCCCAGC...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGTGGTATGGGCCTGGCTaGGCTGGAGCAATGGGGACC | + |
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Preference number: 2 (lower is better) Translates to: YFIFLQYYPDKARRSWWWWYGPG*AGAMGT Trigger: GGTCCCCATTGCTCCAGCCCAGCCAGGCCCATACCA...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTAAAATGTTTTCAACCTaGAAGTCCCACTTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FQILARVTPPCSKLQGTLKMFST*KSHLLR Trigger: CCTGAGCAAGTGGGACTTTCAGGTTGAAAACATTTT...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTTGATGTGTTTGGTGTTTGCCTaGGGTTTCAGTCACAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: LCSCGLGAYLCSHSNQLMCLVFA*GFSHKA Trigger: CGCCTTGTGACTGAAACCTCAGGCAAACACCAAACA...CATCAACTGGTTGCTATGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 90 bp | AGCCATTTGGCTACATGTTTATTTTACCCTTTACATCTGGTTCTCTaGGCTCCTGACCCTTCTCACATGGCCCACCTCAGGGTCACATTC | + |
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Preference number: 2 (lower is better) Translates to: SHLATCLFYPLHLVL*APDPSHMAHLRVTF Trigger: GAATGTGACCCTGAGGTGGGCCATGTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTAAAGGGTAAAATAAACATGTAGCCAAATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTTGATGGGCAAGTGTGCCACCTaGCTAGAATCTGGTCTATTT | + |
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Preference number: 2 (lower is better) Translates to: LCSCGLGAYLCSHSNQLMGKCAT*LESGLF Trigger: AAATAGACCAGATTCTAGGCAGGTGGCACACTTGCC...CATCAACTGGTTGCTATGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACAGCCTTTGGCAAAACATaGCCTCCTTCCCAACGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTAFGKT*PPSQRQ Trigger: CTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGC...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACACTTCACAGCCGCCTTTaGCAAAACATGCCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTLHSRL*QNMPSF Trigger: GAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAG...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGTTAATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCCAAGCTGCTGGTTTCTaGTTCTGTAAACAAGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LVNFSPSLSHIKPHLPSGQAAGF*FCKQAC Trigger: ACAAGCTTGTTTACAGAAGCAGAAACCAGCAGCTTG...GCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATTAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTTGATGCACCTGCCTAGAATCTaGTCTATTTGTGCCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: LCSCGLGAYLCSHSNQLMHLPRI*SICACI Trigger: GATACAGGCACAAATAGACCAGATTCTAGGCAGGTG...CATCAACTGGTTGCTATGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACATTCAAAGCCAGCATTTaGGGTAAGCACATGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTFKASI*GKHMLV Trigger: CACCAGCATGTGCTTACCTCAAATGCTGGCTTTGAA...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACATACATCTGGTTCTCTTaGCTCCTGACCCTTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTYIWFS*LLTLLT Trigger: TGTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTA...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGTGCCCTTCCCCCAGCTaGTCTTCCCTATATAATCCA | + |
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Preference number: 2 (lower is better) Translates to: YFIFLQYYPDKARRSWWWCPSPS*SSLYNP Trigger: TGGATTATATAGGGAAGAGCAGCTGGGGGAAGGGCA...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAAATCTATGAAACAAAAATGTTTTCAACCTGAAAGTCCCACTTGCTCAGGGGTATGTGTTGATGTCTaGCTGTCCATCCAGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KKSMKQKCFQPESPTCSGVCVDV*LSIQSR Trigger: TCTGCTCTGGATGGACAGGCAGACATCAACACATAC...CCCTGAGCAAGTGGGACTTTCAGGTTGAAAACATTTTTGTTTCATAGATTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACATTTTATTTGATTCAGTaGTTTCATAGAGCCTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTATRKTIVWCLPEVSVTFYLIQ*FHRACN Trigger: GTTGCAGGCTCTATGAAAGCACTGAATCAAATAAAA...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | ACAACAGCCCTGCCCTGGCATGCCTGGGGGCTGTTCTaGTTTGTTCTCAGTCCCAGGCAGGGGCGTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTALPWHAWGLF*FVLSPRQGRGL Trigger: GAGCCCACGCCCCTGCCTGGGACTGAGAACAAAGCAGAACAGCCCCCAGGCATGCCAGGGCAGGGCTGTTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | GGGTTCTCCAGGCTGGCCTTCCCTGGGCCTCTACCATaGACTCTCCAGCATAGGTGCTGGGCTGCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GFSRLAFPGPLP*TLQHRCWAALP Trigger: GGGAAGGGCAGCCCAGCACCTATGCTGGAGAGTTCATGGTAGAGGCCCAGGGAAGGCCAGCCTGGAGAACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | ATGCTGGTGTGGCCTGTGGTATGGGCCTGGCTGGGCTaGAGCAATGGGGACCACCTTCTGCAAGACAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MLVWPVVWAWLG*SNGDHLLQDRL Trigger: CAGCCTGTCTTGCAGAAGGTGGTCCCCATTGCTCCAGCCCAGCCAGGCCCATACCACAGGCCACACCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | AGGAATGCCTTAACAACAGCCCTGCCCTGGCATGCCTaGGGGCTGTTCTGCTTTGTTCTCAGTCCCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RNALTTALPWHA*GLFCFVLSPRQ Trigger: CTGCCTGGGACTGAGAACAAAGCAGAACAGCCCCCAGGCATGCCAGGGCAGGGCTGTTGTTAAGGCATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | GCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTaGCAAAACATGCCCTCCTTCCCAACGTCAGCGACC | + |
|
Preference number: 3 (lower is better) Translates to: ASCRVHFLHSRL*QNMPSFPTSAT Trigger: GGTCGCTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | CCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTTaGAGCAAGCTGCAGGGTACACTTTCTTCACAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: PIFQILARVTPP*SKLQGTLSSQP Trigger: CGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | TGCTCAGTTTCAAAGCCAGCATTTGAGGTAAGCACATaGTGGTGTGGCCTGTGGTATGGGCCTGGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSVSKPAFEVST*WCGLWYGPGWA Trigger: AGCCCAGCCAGGCCCATACCACAGGCCACACCAGCATGTGCTTACCTCAAATGCTGGCTTTGAAACTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | TACATCTGGTTCTCTTGGCTCCTGACCCTTCTCACATaGCCCACCTCAGGGTCACATTCACTCTGGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YIWFSWLLTLLT*PTSGSHSLWAH Trigger: GTGAGCCCAGAGTGAATGTGACCCTGAGGTGGGCCATGTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | TCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTaGCTGCAGGCGGCTACACCCAGCAAATCTGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: SQPFPYKTPPSQ*LQAATPSKSES Trigger: GGATTCAGATTTGCTGGGTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | GGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATaGCCTCCTTCCCAACGTCAGCGACCAAGAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GYTFFTAAFGKT*PPSQRQRPRDS Trigger: TGAGTCTCTTGGTCGCTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | GCTGGAGCAATGGGGACCACCTTCTGCAAGACAGGCTaGAGATTGAGGCTTAGAGTGAGACCCATCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGAMGTTFCKTG*RLRLRVRPIFQ Trigger: TTGGAAGATGGGTCTCACTCTAAGCCTCAATCTCCAGCCTGTCTTGCAGAAGGTGGTCCCCATTGCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTaGGCAAAACATGCCCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQILARVTPPCSKLQGTLSSQPP*AKHALL Trigger: AAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGA...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | GCAGGATTGTGTCCCTCCTCCCAGATGGATGGACTATaGGTGGTATGTGTTGATGTCTGCCTGTCCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AGLCPSSQMDGL*VVCVDVCLSIQ Trigger: CTGGATGGACAGGCAGACATCAACACATACCACTCATAGTCCATCCATCTGGGAGGAGGGACACAATCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | TGGACAGTGGAGGTGCTCAGTTTCAAAGCCAGCATTTaGGGTAAGCACATGCTGGTGTGGCCTGTGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: WTVEVLSFKASI*GKHMLVWPVVW Trigger: CCATACCACAGGCCACACCAGCATGTGCTTACCTCAAATGCTGGCTTTGAAACTGAGCACCTCCACTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | GATGTTCTTAGGAATGCCTTAACAACAGCCCTGCCCTaGCATGCCTGGGGGCTGTTCTGCTTTGTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DVLRNALTTALP*HAWGLFCFVLS Trigger: ACTGAGAACAAAGCAGAACAGCCCCCAGGCATGCCAGGGCAGGGCTGTTGTTAAGGCATTCCTAAGAACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCTTACATCTGGTTCTCTaGGCTCCTGACCCTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKLQGTLSSQPPLAKHALLHLVL*APDPSH Trigger: GTGAGAAGGGTCAGGAGCCAAGAGAACCAGATGTAA...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTTATGAGTGGTATGTGTaGATGTCTGCCTGTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: FQILARVTPPCSKLQGTLYEWYV*MSACPS Trigger: GGATGGACAGGCAGACATCAACACATACCACTCATA...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | GTGGTCCAGTCGCCAGGACTGGTTAACACCAGGTCTTaGGTGCTCCTTTGTTCTCAGCTGAGATGCCTATTA | + |
|
Preference number: 3 (lower is better) Translates to: VVQSPGLVNTRS*VLLCSQLRCLL Trigger: TAATAGGCATCTCAGCTGAGAACAAAGGAGCACTCAAGACCTGGTGTTAACCAGTCCTGGCGACTGGACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | TATGTGTTGATGTCTGCCTGTCCATCCAGAGCAGAATaGTGGGAGGATAGCAAGACTGGAAGCAGGAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: YVLMSACPSRAE*WEDSKTGSRRL Trigger: GAGTCTCCTGCTTCCAGTCTTGCTATCCTCCCACCATTCTGCTCTGGATGGACAGGCAGACATCAACACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | AGGAAGTACAGTCAGGATGTATGCTTGCCCCCTGATTaGACAAAAGCAGGATTGTGTCCCTCCTCCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RKYSQDVCLPPD*TKAGLCPSSQM Trigger: CATCTGGGAGGAGGGACACAATCCTGCTTTTGTCCAATCAGGGGGCAAGCATACATCCTGACTGTACTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | AATTACATGAGGACGTTTAATTACGGAGCTCTGGACTaGCATGTATCCCACACAGGAGATAACGGATGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: NYMRTFNYGALD*HVSHTGDNGCR Trigger: CCGACATCCGTTATCTCCTGTGTGGGATACATGTCAGTCCAGAGCTCCGTAATTAAACGTCCTCATGTAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | AGGAGGTACATAAACAGGAAGTACAGTCAGGATGTATaGTTGCCCCCTGATTGGACAAAAGCAGGATTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRYINRKYSQDV*LPPDWTKAGLC Trigger: ACACAATCCTGCTTTTGTCCAATCAGGGGGCAAGCATACATCCTGACTGTACTTCCTGTTTATGTACCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | CAGGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTaGCTGAGGTTTCAGTCACAAGGCGTCTTGGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QEQLPGKQLFGV*LRFQSQGVLGF Trigger: AAAACCCAAGACGCCTTGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | GAGATGTCAGGAACAGCTACCAGGAAAACAATTGTTTaGTGTTTGCCTGAGGTTTCAGTCACAAGGCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EMSGTATRKTIV*CLPEVSVTRRL Trigger: AAGACGCCTTGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCCTGACATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | AAACAAGCTTGTTTGCTCCAACAGCACAGATGTGCTTaGTCACATGTAGGCAGGAGGTACATAAACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQACLLQQHRCA*SHVGRRYINRK Trigger: CTTCCTGTTTATGTACCTCCTGCCTACATGTGATCAAGCACATCTGTGCTGTTGGAGCAAACAAGCTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR TCA 72 bp | AACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTaGGGTTTCAGTCACAAGGCGTCTTGGGTTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: NSYQENNCLVFA*GFSHKASWVLS Trigger: AGATAAAACCCAAGACGCCTTGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR GCA 72 bp | CTGAGGTTTCAGTCACAAGGCGTCTTGGGTTTTATCTaGCAACCCTGGAACTGCAATAAACATCTATATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRFQSQGVLGFI*QPWNCNKHLYY Trigger: GTAATATAGATGTTTATTGCAGTTCCAGGGTTGGCAGATAAAACCCAAGACGCCTTGTGACTGAAACCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAATCTATGAAACAAAAATGTTTTCAACCTGAAAGTCCCACTTGCTCAGGGACAGCACAGATGTGCTaGATCACATGTAGGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KKSMKQKCFQPESPTCSGTAQMC*ITCRQE Trigger: CTCCTGCCTACATGTGATCAAGCACATCTGTGCTGT...CCCTGAGCAAGTGGGACTTTCAGGTTGAAAACATTTTTGTTTCATAGATTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CCA 72 bp | CAGTCACAAGGCGTCTTGGGTTTTATCTGCCAACCCTaGAACTGCAATAAACATCTATATTACCTCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QSQGVLGFICQP*NCNKHLYYLKT Trigger: TGTTTTGAGGTAATATAGATGTTTATTGCAGTTCCAGGGTTGGCAGATAAAACCCAAGACGCCTTGTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGATGGCTGAGGGCACCCCTGGTCCCAACAGGCCTCGGGTGGAAGGCTCCTTTCTGTCCTTTTTaGGAGACCCCTGTGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: STGWLRAPLVPTGLGWKAPFCPF*ETPVHG Trigger: CCCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGG...AGCCTTCCACCCGAGGCCTGTTGGGACCAGGGGTGCCCTCAGCCATCCAGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGATGGCTGAGGGCACCCCTGGTCCCAACAGGCCTCGGGTGGAAGGCTGGAAGCACTCTCTGGTaGCATTGGTCTTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGWLRAPLVPTGLGWKAGSTLW*HWSSAS Trigger: GGAAGCAGAAGACCAATGCCACCAGAGAGTGCTTCC...AGCCTTCCACCCGAGGCCTGTTGGGACCAGGGGTGCCCTCAGCCATCCAGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCTACCATGAACTCTCCAGCATAGGTGCTGGGCTGCCCTTCCCCCAGCTGTCATCTGTACCATCTTaGAGGACGGAGACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLYHELSSIGAGLPFPQLSSVPS*RTETEV Trigger: GACCTCTGTCTCCGTCCTGCAAGATGGTACAGATGA...CAGCTGGGGGAAGGGCAGCCCAGCACCTATGCTGGAGAGTTCATGGTAGAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTCGGGTGAGGCTCACATaGAGCTTCCCGGTGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQILARVTPPCSKLQGTLRVRLT*SFPVAN Trigger: GTTCGCCACCGGGAAGCTGCATGTGAGCCTCACCCG...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCGGCTACACCATGCAGCTTCCCGGTaGCGAACTTGTAGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLSHIKPHLPSGCRRLHHAASR*RTCRSP Trigger: AGGACTCCTACAAGTTCGCCACCGGGAAGCTGCATG...GTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCATCCAGAGCAGAATGGTGGGAGGATAGCAAGACTGGAAGCAGGAGACTCTGTCCCTGGGGCCAGTaGGCCTCATTACTGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: CPSRAEWWEDSKTGSRRLCPWGQ*ASLLGP Trigger: CGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGACA...GAGTCTCCTGCTTCCAGTCTTGCTATCCTCCCACCATTCTGCTCTGGATGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTAATCACCGCTCCCGCTaGCGTCCCTGCAAAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FQILARVTPPCSKLQGTLNHRSR*RPCKAM Trigger: CATCGCTTTGCAGGGACGTCAGCGGGAGCGGTGATT...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCTCTAGGGGACTCGGGTaGCCCAATAGGCACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLQGTLSSQPPLAKHALSRGLG*PNRHRG Trigger: TCCTCTGTGCCTATTGGGTCACCCGAGTCCCCTAGA...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCGGCTACACCGTTTTTGCCGTATTTaGATCCTCACCAGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLSHIKPHLPSGCRRLHRFCRI*ILTRTL Trigger: GAGGGTCCTGGTGAGGATTCAAATACGGCAAAAACG...GTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCTCGGACAGATGTCCTaGTGGCTGCTGAAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQAAGYTFFTAAFGKTCPLGQMS*WLLKVE Trigger: CTCCACCTTCAGCAGCCAGCAGGACATCTGTCCGAG...AGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCCGGAAGTCCAAGTGTTaGCCTGGATGCTGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLQGTLSSQPPLAKHALRKSKC*PGCCGS Trigger: GGAGCCACAGCATCCAGGGCAACACTTGGACTTCCG...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTTTGGGCAACTGTCCCTaGGGCCAGTGGGCCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FQILARVTPPCSKLQGTLLGNCP*GQWASL Trigger: TAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAA...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CCA 90 bp | CTATTTGTGCCTGTATCTGCTGAGCCTGTGGTCCAGTCGCCAGGACTGGTTAACTGCTCTGCTCGTCAGTaGCAGAGGCCAGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFVPVSAEPVVQSPGLVNCSARQ*QRPEHP Trigger: AGGATGCTCTGGCCTCTGCCACTGACGAGCAGAGCA...GTTAACCAGTCCTGGCGACTGGACCACAGGCTCAGCAGATACAGGCACAAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CAA 72 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTaGGCAAAACATGCCCTCCTTCCCAACGTCAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKLQGTLSSQPP*AKHALLPNVSD Trigger: GTCGCTGACGTTGGGAAGGAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCATCCAGAGCAGAATGGTGGGAGGATAGCAAGACTGGAAGCAGGAGACTCAGGGCTGCATGCTTGTaGAGCCACCGTCGATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CPSRAEWWEDSKTGSRRLRAACL*SHRRCI Trigger: GATACATCGACGGTGGCTTCACAAGCATGCAGCCCT...GAGTCTCCTGCTTCCAGTCTTGCTATCCTCCCACCATTCTGCTCTGGATGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGAGTGAGACCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCCTGTGCATGGGTTTGTaGGGAGTCTGCTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVRPIFQILARVTPPCSLCMGL*GVCWAS Trigger: AGAAGCCCAGCAGACTCCTCACAAACCCATGCACAG...GCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGGTCTCACTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| 3UTR CAA 72 bp | ACCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTaGCAGCAAGCTGCAGGGTACACTTTCTTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: THLPNPSQSDSA*QQAAGYTFFTA Trigger: GGCTGTGAAGAAAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCGAGAAGGAGATGGAATaGGGGGTATCTGGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLQGTLSSQPPLAKHALEKEME*GVSGSP Trigger: AGGAGACCCAGATACCCCTCATTCCATCTCCTTCTC...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCGGCTACACTCCGGGTTTGGAGTTTaGACATTTATTGGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSHIKPHLPSGCRRLHSGFGV*TFIGQL Trigger: CAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGA...GTGTAGCCGCCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR GCA 90 bp | CCAGGCAAGTGTGCCACCTGCCTAGAATCTGGTCTATTTGTGCCTGTATCTGCTCAGAAGGAACAGGGCTaGATGCTTGTGAAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PGKCATCLESGLFVPVSAQKEQG*MLVKPP Trigger: CGGTGGCTTCACAAGCATGCAGCCCTGTTCCTTCTG...AGCAGATACAGGCACAAATAGACCAGATTCTAGGCAGGTGGCACACTTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCTCCCGGAGAAGGAGATaGAATGAGGGGTATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKLQGTLSSQPPLAKHALSRRRR*NEGYLG Trigger: ACCCAGATACCCCTCATTCCATCTCCTTCTCCGGGA...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTGCCTGTATCTGCTGAGCCTGTGGTCCAGTCGCCAGGACTGGTTAACAGTCATGGAAGATGGTaGGGCAGTCTCTCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFVPVSAEPVVQSPGLVNSHGRW*GSLSDR Trigger: TCTGTCCGAGAGACTGCCCCACCATCTTCCATGACT...GTTAACCAGTCCTGGCGACTGGACCACAGGCTCAGCAGATACAGGCACAAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | AATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGGGGGCGGCTGAGGAATaGCTGTCCTTTCTGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFSPSLSHIKPHLPSGCRGAAEE*LSFLSF Trigger: AAAGGACAGAAAGGACAGCCATTCCTCAGCCGCCCC...CCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | CTTAGAGTGAGACCCATCTTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCGGAATGAGGGGTATCTaGGTCTCCTTTGAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRPIFQILARVTPPCSGMRGI*VSFEHL Trigger: CAGGTGTTCAAAGGAGACCCAGATACCCCTCATTCC...GCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAAGATGGGTCTCACTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | TGTCCATCCAGAGCAGAATGGTGGGAGGATAGCAAGACTGGAAGCAGGAGACTCAGTTTGAACATTTATTaGGCAACTGTCCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPSRAEWWEDSKTGSRRLSLNIY*ATVPGA Trigger: GGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACT...GAGTCTCCTGCTTCCAGTCTTGCTATCCTCCCACCATTCTGCTCTGGATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR TCA 90 bp | GGAACAGCTACCAGGAAAACAATTGTTTGGTGTTTGCCTGAGGTTTCAGTCACAGCCGGCTTCTTGGACTaGGCATTTCGGTGGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTATRKTIVWCLPEVSVTAGFLD*AFRWKH Trigger: GTGCTTCCACCGAAATGCTCAGTCCAAGAAGCCGGC...TGTGACTGAAACCTCAGGCAAACACCAAACAATTGTTTTCCTGGTAGCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTTGATGGGTGGAAGCACTCTCTaGTGGCATTGGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSCGLGAYLCSHSNQLMGGSTL*WHWSSA Trigger: AGCAGAAGACCAATGCCACCAGAGAGTGCTTCCACC...CATCAACTGGTTGCTATGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR TCA 90 bp | CTATTTGTGCCTGTATCTGCTGAGCCTGTGGTCCAGTCGCCAGGACTGGTTAACCCATATTCAGCACTCTaGGGTATTTCTCCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFVPVSAEPVVQSPGLVNPYSAL*GISPSQ Trigger: TTGAGATGGAGAAATACCTCAGAGTGCTGAATATGG...GTTAACCAGTCCTGGCGACTGGACCACAGGCTCAGCAGATACAGGCACAAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR GCA 90 bp | CTCGTTAATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCATTCCACAGACTCCTTaGACCCAGATTCAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVNFSPSLSHIKPHLPSGIPQTP*TQIQVS Trigger: AGACACCTGAATCTGGGTGCAAGGAGTCTGTGGAAT...GCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATTAACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGTGCCTGTATCTGCTGAGCCTGTGGTCCAGTCGCCAGGACTGGTTAACTTCTCCAGGGAGAACTaGAAGGAGAAGTTGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LFVPVSAEPVVQSPGLVNFSREN*KEKLNI Trigger: AATGTTCAACTTCTCCTTCCAGTTCTCCCTGGAGAA...GTTAACCAGTCCTGGCGACTGGACCACAGGCTCAGCAGATACAGGCACAAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGGTCCAAGTGTTGCCCTaGATGCTGTGGCTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFIFLQYYPDKARRSWWWVQVLP*MLWLPG Trigger: CCCAGGGAGCCACAGCATCCAGGGCAACACTTGGAC...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 72 bp | GGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTaGATGTATGACTTTACCTGGCGTCAAGGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GLGAYLCSHSNQ*MYDFTWRQGAI Trigger: TATTGCCCCTTGACGCCAGGTAAAGTCATACATCAACTGGTTGCTATGTGAACAAAGATAAGCCCCCAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCAAGTGTGCCACCTGCCTAGAATCTGGTCTATTTGTGCCTGTATCTGCTTACAGGAAAGTTAAGTaGACAAGGTGCAGACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGKCATCLESGLFVPVSAYRKVK*TRCRLQ Trigger: CTGAAGTCTGCACCTTGTCCACTTAACTTTCCTGTA...AGCAGATACAGGCACAAATAGACCAGATTCTAGGCAGGTGGCACACTTGCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| 3UTR CAA 72 bp | CAAACATTAACAGAAAGAACACAGGGCATCAGGACTTaGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTLTERTQGIRT*FLWAGGLSLFT Trigger: TGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCCTGTGTTCTTTCTGTTAATGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CCA 90 bp | AAGAAATCTATGAAACAAAAATGTTTTCAACCTGAAAGTCCCACTTGCTCAGGGTCATTCCTCGTTCTGTaGCAGAGTCCAGGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKSMKQKCFQPESPTCSGSFLVL*QSPGHP Trigger: AGGGTGCCCTGGACTCTGCCACAGAACGAGGAATGA...CCCTGAGCAAGTGGGACTTTCAGGTTGAAAACATTTTTGTTTCATAGATTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR GCA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGGGAAAATCACTCTCTTaGTGGGAGAGTCAAGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: YFIFLQYYPDKARRSWWWGKSLS*WESQGT Trigger: CGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCC...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR TCA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGACTGGAAGGAGAAGTTaGACATTCGGAAGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFIFLQYYPDKARRSWWWTGRRS*TFGSHG Trigger: TCCATGACTTCCGAATGTTCAACTTCTCCTTCCAGT...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 90 bp | CATCTCAATCCCGCAGACGACCAAGGCCGCAATCACCGCTCCCGCTaGCGTCCCTGCAAAGCGATGGGCTGTGTCCAGCATCCTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLNPADDQGRNHRSR*RPCKAMGCVQHPRG Trigger: GCCCCGAGGATGCTGGACACAGCCCATCGCTTTGCAGGGACGTCAGCGGGAGCGGTGATTGCGGCCTTGGTCGTCTGCGGGATTGAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | AGCACTGGATGGCTGAGGGCACCCCTGGTCCCAACAGGCCTCGGGTGGAAGGCTGCGGAAGTCCAAGTGTaGCCCTGGATGCTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STGWLRAPLVPTGLGWKAAEVQV*PWMLWL Trigger: GAGCCACAGCATCCAGGGCAACACTTGGACTTCCGC...AGCCTTCCACCCGAGGCCTGTTGGGACCAGGGGTGCCCTCAGCCATCCAGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 90 bp | GTTTGTGAGGAGTCTGCTGGGCTTCTCCTCAGGGCTGGCAGGTTCTaGAGACTCGGAGGTGGGGGCTCATGGCCAAGGGCGACCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: VCEESAGLLLRAGRF*RLGGGGSWPRATSI Trigger: GATAGAGGTCGCCCTTGGCCATGAGCCCCCACCTCCGAGTCTGCAGAACCTGCCAGCCCTGAGGAGAAGCCCAGCAGACTCCTCACAAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | GCTCGTCAGTGGCAGAGGCCAGAGCATCCTTCATTCCTCGTTCTGTaGCAGAGTCCAGGGCACCCTTCACTCCTCGCTCCGGGTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARQWQRPEHPSFLVL*QSPGHPSLLAPGLE Trigger: CTCCAAACCCGGAGCGAGGAGTGAAGGGTGCCCTGGACTCTGCCACAGAACGAGGAATGAAGGATGCTCTGGCCTCTGCCACTGACGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | AGCACTGGATGGCTGAGGGCACCCCTGGTCCCAACAGGCCTCGGGTGGAAGGCTATCATCTGTACCATCTaGCAGGACGGAGACAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: STGWLRAPLVPTGLGWKAIICTI*QDGDRG Trigger: ACCTCTGTCTCCGTCCTGCAAGATGGTACAGATGAT...AGCCTTCCACCCGAGGCCTGTTGGGACCAGGGGTGCCCTCAGCCATCCAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | CTCGCTCCGGGTTTGGAGTTTGAACATTTATTGGGCAACTGTCCCTaGGGCCAGTGGGCCTCATTACTGGGACCGGCTGGGCTGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LAPGLEFEHLLGNCP*GQWASLLGPAGLGI Trigger: TATCCCCAGCCCAGCCGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 90 bp | GCTGTCCTTTCTGTCCTTTTTGGGAGACCCCTGTGCATGGGTTTGTaGGGAGTCTGCTGGGCTTCTCCTCAGGGCTGGCAGGTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVLSVLFGRPLCMGL*GVCWASPQGWQVLQ Trigger: CTGCAGAACCTGCCAGCCCTGAGGAGAAGCCCAGCAGACTCCTCACAAACCCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | GAGGAATGGCTGTCCTTTCTGTCCTTTTTGGGAGACCCCTGTGCATaGGTTTGTGAGGAGTCTGCTGGGCTTCTCCTCAGGGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEWLSFLSFLGDPCA*VCEESAGLLLRAGR Trigger: CCTGCCAGCCCTGAGGAGAAGCCCAGCAGACTCCTCACAAACCCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGGACAGCCATTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | TTCTGTGGCAGAGTCCAGGGCACCCTTCACTCCTCGCTCCGGGTTTaGAGTTTGAACATTTATTGGGCAACTGTCCCTGGGGCCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FCGRVQGTLHSSLRV*SLNIYWATVPGASG Trigger: CCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTGAAGGGTGCCCTGGACTCTGCCACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 90 bp | GAGTCTGCAGCTGGGAGCAACACAGGTGGCAAGGTAGTTGTGCTCTaGTCGTCAGTGGCAGAGGCCAGAGCATCCTTCATTCCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESAAGSNTGGKVVVL*SSVAEARASFIPRS Trigger: AGAACGAGGAATGAAGGATGCTCTGGCCTCTGCCACTGACGAGCAGAGCACAACTACCTTGCCACCTGTGTTGCTCCCAGCTGCAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | TGCAGACTCGGAGGTGGGGGCTCATGGCCAAGGGCGACCTCTATCTaGCAGTATACTTCAACCCTCGGGAAAATCACTCTCTTGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CRLGGGGSWPRATSI*QYTSTLGKITLLLG Trigger: TCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCCAGATAGAGGTCGCCCTTGGCCATGAGCCCCCACCTCCGAGTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | TTCCAAATCCTAGCCAGAGTGACTCCGCCTTGCAGCAAGCTGCAGGGTACACTTGGGGTAGCTGTAGTCTaGGATCCGGCTGGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQILARVTPPCSKLQGTLGVAVV*DPAGMR Trigger: CCTCATCCCAGCCGGATCCAAGACTACAGCTACCCC...AAGTGTACCCTGCAGCTTGCTGCAAGGCGGAGTCACTCTGGCTAGGATTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | GGTTTGGAGTTTGAACATTTATTGGGCAACTGTCCCTGGGGCCAGTaGGCCTCATTACTGGGACCGGCTGGGCTGGGGATAATGGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: GLEFEHLLGNCPWGQ*ASLLGPAGLGIMAI Trigger: TATCGCCATTATCCCCAGCCCAGCCGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCTACCATGAACTCTCCAGCATAGGTGCTGGGCTGCCCTTCCCCCAGCTGGTCTTCTGCTTCCTCTaGAACATCGTTTTTGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLYHELSSIGAGLPFPQLVFCFL*NIVFAV Trigger: TACGGCAAAAACGATGTTCAAGAGGAAGCAGAAGAC...CAGCTGGGGGAAGGGCAGCCCAGCACCTATGCTGGAGAGTTCATGGTAGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 90 bp | CCAGGAAGAACTTCTTCACCTCCGCCAGGCCCATATTCAGCACTCTaGGGTATTTCTCCATCTCAATCCCGCAGACGACCAAGGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRTSSPPPGPYSAL*GISPSQSRRRPRPQ Trigger: TTGCGGCCTTGGTCGTCTGCGGGATTGAGATGGAGAAATACCTCAGAGTGCTGAATATGGGCCTGGCGGAGGTGAAGAAGTTCTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 90 bp | ATTACTGGGACCGGCTGGGCTGGGGATAATGGCGATACAGATGGTTaGTTGGATATAGAGACCCGTAGTGACACGGGTGATTCCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGTGWAGDNGDTDG*LDIETRSDTGDSTD Trigger: GTCTGTGGAATCACCCGTGTCACTACGGGTCTCTATATCCAAGCAACCATCTGTATCGCCATTATCCCCAGCCCAGCCGGTCCCAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCTCCTTTCTGTCCTTTTaGGGAGACCCCTGTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLQGTLSSQPPLAKHALSFLSF*GDPCAW Trigger: CCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGGA...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 90 bp | CCGGTAGCACATCGTACAAAAACTGTCGCATCATCTGTACCATCTTaGAGGACGGAGACAGAGGTCCCAGGAAGAACTTCTTCACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVAHRTKTVASSVPS*RTETEVPGRTSSPP Trigger: CGGAGGTGAAGAAGTTCTTCCTGGGACCTCTGTCTCCGTCCTGCAAGATGGTACAGATGATGCGACAGTTTTTGTACGATGTGCTACCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGCTGCAGGGTACACTTTCTTCACAGCCGCCTTTGGCAAAACATGCCCTCGGGAAAATCACTCTCTaGCTGGGAGAGTCAAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SKLQGTLSSQPPLAKHALGKITL*LGESRY Trigger: GTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCC...GAGGGCATGTTTTGCCAAAGGCGGCTGTGAAGAAAGTGTACCCTGCAGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | AATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCTGCAGGCACTCTCTGGTGGCATaGGTCTTCTGCTTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NFSPSLSHIKPHLPSGCRHSLVA*VFCFLL Trigger: CAAGAGGAAGCAGAAGACCAATGCCACCAGAGAGTG...CCTGCAGCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 90 bp | CCTCTATCTGGCAGTATACTTCAACCCTCGGGAAAATCACTCTCTTaGTGGGAGAGTCAAGGTACGCTGCATTCAGTCTCCGCAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: PLSGSILQPSGKSLS*WESQGTLHSVSAGM Trigger: CATACCTGCGGAGACTGAATGCAGCGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCCAGATAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | CTATCTGGCAGTATACTTCAACCCTCGGGAAAATCACTCTCTTGCTaGGAGAGTCAAGGTACGCTGCATTCAGTCTCCGCAGGTATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSGSILQPSGKSLSC*ESQGTLHSVSAGMR Trigger: TCTCATACCTGCGGAGACTGAATGCAGCGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCCAGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS-3UTR CAA 90 bp | CTCGTTAATTTCTCTCCCAGCCTTTCCCATATAAAACCCCACCTTCCCAGTGGCGAGTTTGAACATTTATaGGGCAACTGTCCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVNFSPSLSHIKPHLPSGEFEHL*GNCPWG Trigger: GCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTC...GCCACTGGGAAGGTGGGGTTTTATATGGGAAAGGCTGGGAGAGAAATTAACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 90 bp | TTTATAGGTGACCCAAACTCTCTTGGGGAGTACAGGAAAGTTAAGTaGACAAGGTGCAGACTTCAGTTTGCTAGCCGGCTTCTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: FIGDPNSLGEYRKVK*TRCRLQFASRLLGL Trigger: CAGTCCAAGAAGCCGGCTAGCAAACTGAAGTCTGCACCTTGTCCACTTAACTTTCCTGTACTCCCCAAGAGAGTTTGGGTCACCTATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCTTTCTTCAGTACTATCCTGACAAAGCAAGGAGATCCTGGTGGTGGCTCCGGGTTTGGAGTTaGAACATTTATTGGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: YFIFLQYYPDKARRSWWWLRVWS*NIYWAT Trigger: AGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAG...CCACCACCAGGATCTCCTTGCTTTGTCAGGATAGTACTGAAGAAAGATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS GCA 72 bp | GAGTCTGCTGGGCTTCTCCTCAGGGCTGGCAGGTTCTaGAGACTCGGAGGTGGGGGCTCATGGCCAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ESAGLLLRAGRF*RLGGGGSWPRA Trigger: CGCCCTTGGCCATGAGCCCCCACCTCCGAGTCTGCAGAACCTGCCAGCCCTGAGGAGAAGCCCAGCAGACTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS CCA 72 bp | TCCCTGGGGCCAGTGGGCCTCATTACTGGGACCGGCTaGGCTGGGGATAATGGCGATACAGATGGTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGPVGLITGTG*AGDNGDTDGCL Trigger: CAAGCAACCATCTGTATCGCCATTATCCCCAGCCCAGCCGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
||
| CDS CAA 90 bp | GTCGTTCTGGGCCTAGATCCTCCACAGGTGGCCCAGCAGGTGGTGTaGAAGGACTTAGGGGCGGAAGTCCAAGTGTTGCCCTGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: VVLGLDPPQVAQQVV*KDLGAEVQVLPWML Trigger: CAGCATCCAGGGCAACACTTGGACTTCCGCCCCTAAGTCCTTCAACACCACCTGCTGGGCCACCTGTGGAGGATCTAGGCCCAGAACGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | AGACCCGTAGTGACACGGGTGATTCCACAGACTCCTTaGACCCAGATTCAGGTGTCTGCACTGAGGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPVVTRVIPQTP*TQIQVSALRGR Trigger: CCGCCCCCTCAGTGCAGACACCTGAATCTGGGTGCAAGGAGTCTGTGGAATCACCCGTGTCACTACGGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GCTGGCAGGTTCTGCAGACTCGGAGGTGGGGGCTCATaGCCAAGGGCGACCTCTATCTGGCAGTATACTTCA | + |
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Preference number: 6 (lower is better) Translates to: AGRFCRLGGGGS*PRATSIWQYTS Trigger: TGAAGTATACTGCCAGATAGAGGTCGCCCTTGGCCATGAGCCCCCACCTCCGAGTCTGCAGAACCTGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GGAAGTCCAAGTGTTGCCCTGGATGCTGTGGCTCCCTaGGAAGATCTGAGCAGCAGTCTAGGGGACTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSPSVALDAVAP*EDLSSSLGDSG Trigger: ACCCGAGTCCCCTAGACTGCTGCTCAGATCTTCCCAGGGAGCCACAGCATCCAGGGCAACACTTGGACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | GAGACCCGTAGTGACACGGGTGATTCCACAGACTCCTaGCACCCAGATTCAGGTGTCTGCACTGAGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: ETRSDTGDSTDS*HPDSGVCTEGA Trigger: CGCCCCCTCAGTGCAGACACCTGAATCTGGGTGCAAGGAGTCTGTGGAATCACCCGTGTCACTACGGGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | GTTCTGTGGCAGAGTCCAGGGCACCCTTCACTCCTCGCTCCGGGTTaGGAGTTTGAACATTTATTGGGCAACTGTCCCTGGGGCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLWQSPGHPSLLAPG*EFEHLLGNCPWGQW Trigger: CCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTGAAGGGTGCCCTGGACTCTGCCACAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 72 bp | TCTGTCCTTTTTGGGAGACCCCTGTGCATGGGTTTGTaGGGAGTCTGCTGGGCTTCTCCTCAGGGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SVLFGRPLCMGL*GVCWASPQGWQ Trigger: CTGCCAGCCCTGAGGAGAAGCCCAGCAGACTCCTCACAAACCCATGCACAGGGGTCTCCCAAAAAGGACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | GATTCCACAGACTCCTTGCACCCAGATTCAGGTGTCTaGACTGAGGGGGCGGCTGAGGAATGGCTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DSTDSLHPDSGV*TEGAAEEWLSF Trigger: AAAGGACAGCCATTCCTCAGCCGCCCCCTCAGTGCAGACACCTGAATCTGGGTGCAAGGAGTCTGTGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | GCTGGGAGCAACACAGGTGGCAAGGTAGTTGTGCTCTaGTCGTCAGTGGCAGAGGCCAGAGCATCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: AGSNTGGKVVVL*SSVAEARASFI Trigger: AATGAAGGATGCTCTGGCCTCTGCCACTGACGAGCAGAGCACAACTACCTTGCCACCTGTGTTGCTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GGAGGTGGGGGCTCATGGCCAAGGGCGACCTCTATCTaGCAGTATACTTCAACCCTCGGGAAAATCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGGSWPRATSI*QYTSTLGKITL Trigger: GAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCCAGATAGAGGTCGCCCTTGGCCATGAGCCCCCACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GGGCGGCTGAGGAATGGCTGTCCTTTCTGTCCTTTTTaGGAGACCCCTGTGCATGGGTTTGTGAGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRLRNGCPFCPF*ETPVHGFVRSL Trigger: CAGACTCCTCACAAACCCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGGACAGCCATTCCTCAGCCGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | TTTGAACATTTATTGGGCAACTGTCCCTGGGGCCAGTaGGCCTCATTACTGGGACCGGCTGGGCTGGGGATA | + |
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Preference number: 6 (lower is better) Translates to: FEHLLGNCPWGQ*ASLLGPAGLGI Trigger: TATCCCCAGCCCAGCCGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GGTTTGGAGTTTGAACATTTATTGGGCAACTGTCCCTaGGGCCAGTGGGCCTCATTACTGGGACCGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLEFEHLLGNCP*GQWASLLGPAG Trigger: CCCAGCCGGTCCCAGTAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | CAGGGCACCCTTCACTCCTCGCTCCGGGTTTGGAGTTaGAACATTTATTGGGCAACTGTCCCTGGGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QGTLHSSLRVWS*NIYWATVPGAS Trigger: ACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTGAAGGGTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | GTTCTGGCCACTCACTCCCTCGGGGTAGCTGTAGTCTaGGATCCGGCTGGGATGAGGTTTATAGGTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: VLATHSLGVAVV*DPAGMRFIGDP Trigger: TGGGTCACCTATAAACCTCATCCCAGCCGGATCCAAGACTACAGCTACCCCGAGGGAGTGAGTGGCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | TTGGATATAGAGACCCGTAGTGACACGGGTGATTCCACAGACTCCTaGCACCCAGATTCAGGTGTCTGCACTGAGGGGGCGGCTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LDIETRSDTGDSTDS*HPDSGVCTEGAAEE Trigger: TTCCTCAGCCGCCCCCTCAGTGCAGACACCTGAATCTGGGTGCAAGGAGTCTGTGGAATCACCCGTGTCACTACGGGTCTCTATATCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | ACTGGGACCGGCTGGGCTGGGGATAATGGCGATACAGATGGTTGCTaGGATATAGAGACCCGTAGTGACACGGGTGATTCCACAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: TGTGWAGDNGDTDGC*DIETRSDTGDSTDS Trigger: GGAGTCTGTGGAATCACCCGTGTCACTACGGGTCTCTATATCCAAGCAACCATCTGTATCGCCATTATCCCCAGCCCAGCCGGTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 72 bp | TGGAGTCTGTCCAGAAGGAACAGGGCTGCATGCTTGTaGAGCCACCGTCGATGTATCTCTCTCCCCGATACG | + |
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Preference number: 6 (lower is better) Translates to: WSLSRRNRAACL*SHRRCISLPDT Trigger: CGTATCGGGGAGAGAGATACATCGACGGTGGCTTCACAAGCATGCAGCCCTGTTCCTTCTGGACAGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | CTGTCCTTTCTGTCCTTTTTGGGAGACCCCTGTGCATaGGTTTGTGAGGAGTCTGCTGGGCTTCTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSFLSFLGDPCA*VCEESAGLLLR Trigger: CCTGAGGAGAAGCCCAGCAGACTCCTCACAAACCCATGCACAGGGGTCTCCCAAAAAGGACAGAAAGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | CACTCCTCGCTCCGGGTTTGGAGTTTGAACATTTATTaGGCAACTGTCCCTGGGGCCAGTGGGCCTCATTAC | + |
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Preference number: 6 (lower is better) Translates to: HSSLRVWSLNIY*ATVPGASGPHY Trigger: GTAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | AGAGTCCAGGGCACCCTTCACTCCTCGCTCCGGGTTTaGAGTTTGAACATTTATTGGGCAACTGTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RVQGTLHSSLRV*SLNIYWATVPG Trigger: CCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTGAAGGGTGCCCTGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | ACCGGCTGGGCTGGGGATAATGGCGATACAGATGGTTaGTTGGATATAGAGACCCGTAGTGACACGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TGWAGDNGDTDG*LDIETRSDTGD Trigger: ATCACCCGTGTCACTACGGGTCTCTATATCCAAGCAACCATCTGTATCGCCATTATCCCCAGCCCAGCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | GGCTGGGCTGGGGATAATGGCGATACAGATGGTTGCTaGGATATAGAGACCCGTAGTGACACGGGTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: GWAGDNGDTDGC*DIETRSDTGDS Trigger: GGAATCACCCGTGTCACTACGGGTCTCTATATCCAAGCAACCATCTGTATCGCCATTATCCCCAGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | TCACTCCTCGCTCCGGGTTTGGAGTTTGAACATTTATaGGGCAACTGTCCCTGGGGCCAGTGGGCCTCATTA | + |
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Preference number: 6 (lower is better) Translates to: SLLAPGLEFEHL*GNCPWGQWASL Trigger: TAATGAGGCCCACTGGCCCCAGGGACAGTTGCCCAATAAATGTTCAAACTCCAAACCCGGAGCGAGGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 72 bp | ACTTCTTCACCTCCGCCAGGCCCATATTCAGCACTCTaGGGTATTTCTCCATCTCAATCCCGCAGACGACCA | + |
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Preference number: 6 (lower is better) Translates to: TSSPPPGPYSAL*GISPSQSRRRP Trigger: TGGTCGTCTGCGGGATTGAGATGGAGAAATACCTCAGAGTGCTGAATATGGGCCTGGCGGAGGTGAAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GAAGCCACCGTCGATGTATCTCTCTCCCCGATACGTTaGGGGGATGAAGCCACAGTAAACAGGAACAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: EATVDVSLSPIR*GDEATVNRNKA Trigger: TGCTTTGTTCCTGTTTACTGTGGCTTCATCCCCCCAACGTATCGGGGAGAGAGATACATCGACGGTGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | TCCGGTAGCACATCGTACAAAAACTGTCGCATCATCTGTACCATCTaGCAGGACGGAGACAGAGGTCCCAGGAAGAACTTCTTCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGSTSYKNCRIICTI*QDGDRGPRKNFFTS Trigger: GGAGGTGAAGAAGTTCTTCCTGGGACCTCTGTCTCCGTCCTGCAAGATGGTACAGATGATGCGACAGTTTTTGTACGATGTGCTACCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | GGCAGTATACTTCAACCCTCGGGAAAATCACTCTCTTaGTGGGAGAGTCAAGGTACGCTGCATTCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSILQPSGKSLS*WESQGTLHSVS Trigger: GGAGACTGAATGCAGCGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | GAGAACTGGAAGGAGAAGTTGAACATTCGGAAGTCATaGAAGATGGTGGGGCAGTCTCTCGGACAGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: ENWKEKLNIRKS*KMVGQSLGQMS Trigger: GGACATCTGTCCGAGAGACTGCCCCACCATCTTCCATGACTTCCGAATGTTCAACTTCTCCTTCCAGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | ACCTCTATCTGGCAGTATACTTCAACCCTCGGGAAAATCACTCTCTaGCTGGGAGAGTCAAGGTACGCTGCATTCAGTCTCCGCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: TSIWQYTSTLGKITL*LGESRYAAFSLRRY Trigger: ATACCTGCGGAGACTGAATGCAGCGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACTGCCAGATAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 90 bp | TTTCGGTGGAAGCACTCTCTGGTGGCATTGGTCTTCTGCTTCCTCTaGAACATCGTTTTTGCCGTATTTGAATCCTCACCAGGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FRWKHSLVALVFCFL*NIVFAVFESSPGPS Trigger: GGAGGGTCCTGGTGAGGATTCAAATACGGCAAAAACGATGTTCAAGAGGAAGCAGAAGACCAATGCCACCAGAGAGTGCTTCCACCGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS TCA 72 bp | CTTCTGCTTCCTCTTGAACATCGTTTTTGCCGTATTTaGATCCTCACCAGGACCCTCCACCAGCAGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLPLEHRFCRI*ILTRTLHQQRL Trigger: AAGCCTCTGCTGGTGGAGGGTCCTGGTGAGGATTCAAATACGGCAAAAACGATGTTCAAGAGGAAGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS GCA 72 bp | TCTCTTGGGGAGTACAGGAAAGTTAAGTGGACAAGGTaGAGACTTCAGTTTGCTAGCCGGCTTCTTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SLGEYRKVKWTR*RLQFASRLLGL Trigger: CAGTCCAAGAAGCCGGCTAGCAAACTGAAGTCTGCACCTTGTCCACTTAACTTTCCTGTACTCCCCAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CCA 72 bp | AGTATACTTCAACCCTCGGGAAAATCACTCTCTTGCTaGGAGAGTCAAGGTACGCTGCATTCAGTCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SILQPSGKSLSC*ESQGTLHSVSA Trigger: TGCGGAGACTGAATGCAGCGTACCTTGACTCTCCCAGCAAGAGAGTGATTTTCCCGAGGGTTGAAGTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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| CDS CAA 72 bp | AAGCACTCTCTGGTGGCATTGGTCTTCTGCTTCCTCTaGAACATCGTTTTTGCCGTATTTGAATCCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: KHSLVALVFCFL*NIVFAVFESSP Trigger: TGGTGAGGATTCAAATACGGCAAAAACGATGTTCAAGAGGAAGCAGAAGACCAATGCCACCAGAGAGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056866.8 |
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