Pregenerated sensors for PNP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068417Ensembl transcript IDs: ENSMUST00000095925.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTTATAAAGAGGGAAACCCCTCCCGAGTCACACCAAGTTTCTTaGTGTCATCAGCACAGCCTTTTAGCAGCAATTCGACAGATTCAC | + |
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Preference number: 1 (lower is better) Translates to: VLIKRETPPESHQVS*CHQHSLLAAIRQIH Trigger: GTGAATCTGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGACTCGGGAGGGGTTTCCCTCTTTATAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR CCA 90 bp | AGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAAAATCTTaGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: SNSTDSQVVVNSRKS*RSTSASGQVKAVSN Trigger: ATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR CCA 72 bp | AAGAAACTAGTTGAATTAGAGAAGCAGCACATCAGGTaGCCCCACCTCAGTGGCATACAGTCTGAACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: KKLVELEKQHIR*PHLSGIQSEPA Trigger: GGCTGGTTCAGACTGTATGCCACTGAGGTGGGGCCACCTGATGTGCTGCTTCTCTAATTCAACTAGTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR TCA 72 bp | AAGAGGGAAACCCCTCCCGAGTCACACCAAGTTTCTTaGTGTCATCAGCACAGCCTTTTAGCAGCAATTCGA | + |
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Preference number: 3 (lower is better) Translates to: KRETPPESHQVS*CHQHSLLAAIR Trigger: TCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGACTCGGGAGGGGTTTCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR-3UTR CAA 90 bp | AGGTTCAAATGTTTAATAAAAGTCTGTGCTTATAAAGAGGGAAACCCCTCCCGACGACAGATTCACAGGTaGTTGTTAACTCCAGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: RFKCLIKVCAYKEGNPSRRQIHR*LLTPEN Trigger: ATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCG...TCGGGAGGGGTTTCCCTCTTTATAAGCACAGACTTTTATTAAACATTTGAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | CTAGTTGAATTAGAGAAGCAGCACATCAGGTGGCCCCACCTCAGTGGCATACAGCAAACCTTTCATCGTTaGGGCCCCGGAGAGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVELEKQHIRWPHLSGIQQTFHR*GPGEGS Trigger: AGAACCCTCTCCGGGGCCCCAACGATGAAAGGTTTG...CTGTATGCCACTGAGGTGGGGCCACCTGATGTGCTGCTTCTCTAATTCAACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | CTCCAGAAAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCACACGAAGCCCACAGTaGCTTGCGACGATAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LQKILEKHFSLRAGEGSVTRSPQ*LATITS Trigger: AGAAGTTATCGTCGCAAGGCACTGTGGGCTTCGTGT...GACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | CTCCAGAAAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCCCTTGCACTGTGCTTTaGGGAAAGTTGGGTATCTCA | + |
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Preference number: 4 (lower is better) Translates to: LQKILEKHFSLRAGEGSVPCTVL*GKLGIS Trigger: TGAGATACCCAACTTTCCCCAAAGCACAGTGCAAGG...GACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | GTCACACCAAGTTTCTTGATGTCATCAGCACAGCCTTTTAGCAGCAATTCGACACTGGGACTGTGCTCATaGCAACAGCATCTGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTPSFLMSSAQPFSSNSTLGLCS*QQHLPP Trigger: TGGGGGCAGATGCTGTTGGCATGAGCACAGTCCCAG...TGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | GTCACACCAAGTTTCTTGATGTCATCAGCACAGCCTTTTAGCAGCAATTCGACAAAACACCAGTCGGCCTaGGTGACCTTGCACTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VTPSFLMSSAQPFSSNSTKHQSA*VTLHCA Trigger: AGCACAGTGCAAGGTCACGCAGGCCGACTGGTGTTT...TGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | CTAGTTGAATTAGAGAAGCAGCACATCAGGTGGCCCCACCTCAGTGGCATACAGTCCACACCCAGAAGATaGAAAACTCTCACTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LVELEKQHIRWPHLSGIQSTPRR*KTLTGN Trigger: ATTCCCAGTGAGAGTTTTCCATCTTCTGGGTGTGGA...CTGTATGCCACTGAGGTGGGGCCACCTGATGTGCTGCTTCTCTAATTCAACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR CAA 72 bp | AAAGAGGGAAACCCCTCCCGAGTCACACCAAGTTTCTaGATGTCATCAGCACAGCCTTTTAGCAGCAATTCG | + |
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Preference number: 4 (lower is better) Translates to: KEGNPSRVTPSF*MSSAQPFSSNS Trigger: CGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGACTCGGGAGGGGTTTCCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAACGATATTCAGTGTGTTaGAGAAGCCACTTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KSWRSTSASGQVKAVSNQRYSVC*RSHLAV Trigger: CACTGCCAAGTGGCTTCTGCAACACACTGAATATCG...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | CCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAAAATCTCCCCGGAGAGGGTTCTaGCCACAGAAACCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PFSSNSTDSQVVVNSRKSPRRGF*PQKPGR Trigger: CCTACCTGGTTTCTGTGGCCAGAACCCTCTCCGGGG...AGATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAAAAGAAACTATCCAGAACTTCCTTGTaGTTGGCCTTCTCCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RSTSASGQVKAVSNQKKLSRTSL*LAFSKF Trigger: GAACTTGGAGAAGGCCAATCACAAGGAAGTTCTGGA...TAGTTTCTTTTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAATCTTGTAGCTTTCGTTaGTCCCCCATTTGTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KSWRSTSASGQVKAVSNQSCSFR*SPICFQ Trigger: CTGGAAACAAATGGGGGAGCAACGAAAGCTACAAGA...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | AGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAAAAGAAACTACCACAGTCTCAAAGTTaGGACCTGCCAACATCACAT | + |
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Preference number: 4 (lower is better) Translates to: RSTSASGQVKAVSNQKKLPQSQS*DLPTSH Trigger: ATGTGATGTTGGCAGGTCCCAACTTTGAGACTGTGG...TAGTTTCTTTTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR TCA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAACATGTTCGTAATGAGTaGGAAACCAAAGACACGAAG | + |
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Preference number: 4 (lower is better) Translates to: KSWRSTSASGQVKAVSNQHVRNE*ETKDTK Trigger: CTTCGTGTCTTTGGTTTCTCACTCATTACGAACATG...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | ATTCACAGGTTGTTGTTAACTCCAGAAAATCTTGGAGAAGCACTTCAGCCTCAGCGTGACCTTGCACTGTaGTTTGGGGAAAGTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: IHRLLLTPENLGEALQPQRDLAL*FGESWV Trigger: TACCCAACTTTCCCCAAAGCACAGTGCAAGGTCACG...CTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | TGTTTAATAAAAGTCTGTGCTTATAAAGAGGGAAACCCCTCCCGAGTCACACCACTCAAAGTTGGGACCTaGCAACATCACATAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLIKVCAYKEGNPSRVTPLKVGT*QHHIGA Trigger: GGCACCTATGTGATGTTGGCAGGTCCCAACTTTGAG...TGGTGTGACTCGGGAGGGGTTTCCCTCTTTATAAGCACAGACTTTTATTAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | TGTTTAATAAAAGTCTGTGCTTATAAAGAGGGAAACCCCTCCCGAGTCACACCAATATGGAACCGGCCTTaGATCATCACACAGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: CLIKVCAYKEGNPSRVTPIWNRP*IITQDL Trigger: CAGATCCTGTGTGATGATGCAAGGCCGGTTCCATAT...TGGTGTGACTCGGGAGGGGTTTCCCTCTTTATAAGCACAGACTTTTATTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AGGTTCAAATGTTTAATAAAAGTCTGTGCTTATAAAGAGGGAAACCCCTCCCGAAAGCCCACAGTGCCTTaGGACGATAACTTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RFKCLIKVCAYKEGNPSRKPTVP*DDNFWD Trigger: GTCCCAGAAGTTATCGTCGCAAGGCACTGTGGGCTT...TCGGGAGGGGTTTCCCTCTTTATAAGCACAGACTTTTATTAAACATTTGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | GTCACACCAAGTTTCTTGATGTCATCAGCACAGCCTTTTAGCAGCAATTCGACAGTTGCAGAAGCCACTTaGCAGTGGTCTCATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: VTPSFLMSSAQPFSSNSTVAEAT*QWSHNL Trigger: AAGATTATGAGACCACTGCCAAGTGGCTTCTGCAAC...TGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAAACTTGGTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAATGCTTTGGGGAAAGTTaGGTATCTCATTGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KSWRSTSASGQVKAVSNQCFGES*VSHCSQ Trigger: TTGACTACAATGAGATACCCAACTTTCCCCAAAGCA...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR TCA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAACATAATCTTCGTATGTaGACTCTTTCTCTATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KSWRSTSASGQVKAVSNQHNLRM*TLSLWC Trigger: ACACCATAGAGAAAGAGTTCACATACGAAGATTATG...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAAAATCAATTTCTGTGCAGCTaGTTTCCCGGCATCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLLAAIRQIHRLLLTPENQFLCS*FPGIQN Trigger: GTTCTGGATGCCGGGAAAGCAGCTGCACAGAAATTG...ATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | TTCTTGATGTCATCAGCACAGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTCATAAGCATCAGACATaGCAGGAAAACGAACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLMSSAQPFSSNSTDSQVHKHQT*QENELQ Trigger: TTGGAGTTCGTTTTCCTGCCATGTCTGATGCTTATG...AACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CCA 90 bp | TTCTTGATGTCATCAGCACAGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGAACTTCCTTGTGATTaGCCTTCTCCAAGTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FLMSSAQPFSSNSTDSQVELPCD*PSPSSH Trigger: ATGAGAACTTGGAGAAGGCCAATCACAAGGAAGTTC...AACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCTGTGCTGATGACATCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR CAA 72 bp | AGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTaGTTAACTCCAGAAAATCTTGGAGAAGCACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLAAIRQIHRL*LTPENLGEALQ Trigger: CTGAAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| 3UTR CAA 72 bp | CACAGCCTTTTAGCAGCAATTCGACAGATTCACAGGTaGTTGTTAACTCCAGAAAATCTTGGAGAAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: HSLLAAIRQIHR*LLTPENLGEAL Trigger: AAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAAAATTCATCACACAGGATCTaGCATTCAGCAATCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SLLAAIRQIHRLLLTPENSSHRI*HSAIQT Trigger: TGTTTGGATTGCTGAATGGCAGATCCTGTGTGATGA...ATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAAAATCCAACATCACATAGGTaGCTTCTTGTAGCTTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: SLLAAIRQIHRLLLTPENPTSHR*LLVAFV Trigger: AACGAAAGCTACAAGAAGGCACCTATGTGATGTTGG...ATTTTCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS TCA 90 bp | TGCCTTCTTGTAGCTTTCGTTGCTCCCCCATTTGTTTCCAGGCACTaGAAGCCTTCTGCCTCATATCCCGGTCATAAGCATCAGACATGG | + |
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Preference number: 5 (lower is better) Translates to: CLLVAFVAPPFVSRH*KPSASYPGHKHQTW Trigger: CCATGTCTGATGCTTATGACCGGGATATGAGGCAGAAGGCTTTCAGTGCCTGGAAACAAATGGGGGAGCAACGAAAGCTACAAGAAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS TCA 90 bp | TGTGTTGCAGAAGCCACTTGGCAGTGGTCTCATAATCTTCGTATGTaGACTCTTTCTCTATGGTGTCACCGACAGAGGCGCCCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: CVAEATWQWSHNLRM*TLSLWCHRQRRPNL Trigger: AAGATTTGGGCGCCTCTGTCGGTGACACCATAGAGAAAGAGTTCACATACGAAGATTATGAGACCACTGCCAAGTGGCTTCTGCAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | AAATCTTGGAGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAATCTCCAACTTCAAAATaGGGGTTGAGTCCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: KSWRSTSASGQVKAVSNQSPTSK*GLSPPA Trigger: TGCTGGAGGACTCAACCCCAATTTTGAAGTTGGAGA...TTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCTCCAAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | AGAAGCACTTCAGCCTCAGGGCAGGTGAAGGCAGTGTCAAATCAAAAGAAACTAACAGATCACTGCCACTaGAGGTCGATATTCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RSTSASGQVKAVSNQKKLTDHCH*RSIFSV Trigger: CACACTGAATATCGACCTCAAGTGGCAGTGATCTGT...TAGTTTCTTTTGATTTGACACTGCCTTCACCTGCCCTGAGGCTGAAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | ATTCACAGGTTGTTGTTAACTCCAGAAAATCTTGGAGAAGCACTTCAGCCTCAGAGTCCTCCAGCAGCATaGGTGACCACCAAAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: IHRLLLTPENLGEALQPQSPPAA*VTTKVS Trigger: GGAAACTTTGGTGGTCACCAATGCTGCTGGAGGACT...CTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | ATTCACAGGTTGTTGTTAACTCCAGAAAATCTTGGAGAAGCACTTCAGCCTCAGCATATGGAACCGGCCTaGCATCATCACACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: IHRLLLTPENLGEALQPQHMEPA*HHHTGS Trigger: AGATCCTGTGTGATGATGCAAGGCCGGTTCCATATG...CTGAGGCTGAAGTGCTTCTCCAAGATTTTCTGGAGTTAACAACAACCTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | GCACAGCCTTTTAGCAGCAATTCGACAGATTCACAGGTTGTTGTTAACTCCAGAACTTCAAAATTGGGGTaGAGTCCTCCAGCAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: AQPFSSNSTDSQVVVNSRTSKLG*SPPAAL Trigger: CAATGCTGCTGGAGGACTCAACCCCAATTTTGAAGT...TCTGGAGTTAACAACAACCTGTGAATCTGTCGAATTGCTGCTAAAAGGCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS-3UTR CAA 90 bp | TTCAAATGTTTAATAAAAGTCTGTGCTTATAAAGAGGGAAACCCCTCCCGAGTCTCGTTGCTCCCCCATTaGTTTCCAGGCACTGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: FKCLIKVCAYKEGNPSRVSLLPH*FPGTES Trigger: GCTTTCAGTGCCTGGAAACAAATGGGGGAGCAACGA...GACTCGGGAGGGGTTTCCCTCTTTATAAGCACAGACTTTTATTAAACATTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS CCA 72 bp | GACACGAAGCCCACAGTGCCTTGCGACGATAACTTCTaGGACTGTGCTCATGCCAACAGCATCTGCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DTKPTVPCDDNF*DCAHANSICPQ Trigger: CTGGGGGCAGATGCTGTTGGCATGAGCACAGTCCCAGAAGTTATCGTCGCAAGGCACTGTGGGCTTCGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS TCA 72 bp | GAAGCCACTTGGCAGTGGTCTCATAATCTTCGTATGTaGACTCTTTCTCTATGGTGTCACCGACAGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: EATWQWSHNLRM*TLSLWCHRQRR Trigger: GCGCCTCTGTCGGTGACACCATAGAGAAAGAGTTCACATACGAAGATTATGAGACCACTGCCAAGTGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS CCA 72 bp | TCTTTAGCAGACGACTCTCTGCCACAGTCTCAAAGTTaGGACCTGCCAACATCACATAGGTGCCTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLADDSLPQSQS*DLPTSHRCLLV Trigger: TACAAGAAGGCACCTATGTGATGTTGGCAGGTCCCAACTTTGAGACTGTGGCAGAGAGTCGTCTGCTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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| CDS CAA 72 bp | CGGATCAGCATAATATCTCCAACTTCAAAATTGGGGTaGAGTCCTCCAGCAGCATTGGTGACCACCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RISIISPTSKLG*SPPAALVTTKV Trigger: AACTTTGGTGGTCACCAATGCTGCTGGAGGACTCAACCCCAATTTTGAAGTTGGAGATATTATGCTGATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095925.5 |
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