Pregenerated sensors for PNOC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045731Ensembl transcript IDs: ENSMUST00000059339.6, ENSMUST00000224594.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGAGGGGCAACAACCGGGCAGGGAGGTGCTGTGGGTGCTCAGTaGCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: EGGATTGQGGAVGAQ*LGEGGILTPGLQVL Trigger: CAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACCTCCCTGCCCGGTTGTTGCCCCTCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR TCA 90 bp | AGGGAGGTGCTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTaGCTCCCGGCCTGCAGGTCTTGGAGTGGACACATGCTGTACGGG | + |
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Preference number: 1 (lower is better) Translates to: REVLWVLSASGREES*LPACRSWSGHMLYG Trigger: CCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR GCA 90 bp | GGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTGGACACATaGTGTACGGGGGATCACCTGGATGCTCATGGGTTGCAGTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: GRNPDSRPAGLGVDT*CTGDHLDAHGLQWP Trigger: CGGCCACTGCAACCCATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CCA 90 bp | CTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTaGACACATGCTGTACGGGGGATCACCTGGATGCTCATGGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LGEGGILTPGLQVLE*THAVRGITWMLMGC Trigger: GCAACCCATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR GCA 90 bp | CCTGCCAGCCCCATCACCTGGAAGCTGCTAAAATGTATAAGATTCTaGTGGGTCTGGAGCTTCGAGTGGCCTCTAATAGTAGCTGGATGT | + |
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Preference number: 1 (lower is better) Translates to: PASPITWKLLKCIRF*WVWSFEWPLIVAGC Trigger: ACATCCAGCTACTATTAGAGGCCACTCGAAGCTCCAGACCCAGCAGAATCTTATACATTTTAGCAGCTTCCAGGTGATGGGGCTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CCA 90 bp | GCCAGCCCCATCACCTGGAAGCTGCTAAAATGTATAAGATTCTGCTaGGTCTGGAGCTTCGAGTGGCCTCTAATAGTAGCTGGATGTCCT | + |
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Preference number: 1 (lower is better) Translates to: ASPITWKLLKCIRFC*VWSFEWPLIVAGCP Trigger: AGGACATCCAGCTACTATTAGAGGCCACTCGAAGCTCCAGACCCAGCAGAATCTTATACATTTTAGCAGCTTCCAGGTGATGGGGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CCA 90 bp | CCCATCACCTGGAAGCTGCTAAAATGTATAAGATTCTGCTGGGTCTaGAGCTTCGAGTGGCCTCTAATAGTAGCTGGATGTCCTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: PITWKLLKCIRFCWV*SFEWPLIVAGCPQR Trigger: CCTTTGAGGACATCCAGCTACTATTAGAGGCCACTCGAAGCTCCAGACCCAGCAGAATCTTATACATTTTAGCAGCTTCCAGGTGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGTCACCTGGATGCTCATaGGTTGCAGTGGCCGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GAVGAQCLGEGGILTPGLSPGCS*VAVAGA Trigger: TGCACCGGCCACTGCAACCCATGAGCATCCAGGTGA...CAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CAA 90 bp | CAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTaGGAGTGGACACATGCTGTACGGGGGATCACCTGGATGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: QCLGEGGILTPGLQV*EWTHAVRGITWMLM Trigger: CATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCTCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACGGCAGGGAGGTGCTGTaGGTGCTCAGTGCCTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGSQSSAMGSDTCLKTAYGREVL*VLSASG Trigger: CCCCGAGGCACTGAGCACCCACAGCACCTCCCTGCC...GTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGAGCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTGGATGTCCTCAAAGGTTGAGACCCAGTCTCCTCTCCAGCCCTTGCTCAAACAATCAGGCAACTaGGAAGATGGCTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SSWMSSKVETQSPLQPLLKQSGN*EDGSEV Trigger: AACCTCTGAGCCATCTTCCCAGTTGCCTGATTGTTT...GAGCAAGGGCTGGAGAGGAGACTGGGTCTCAACCTTTGAGGACATCCAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTCCGGCCTGCAGGTCTTaGAGTGGACACATGCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRPACRS*SGHMLY Trigger: GTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGG...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR GCA 90 bp | CCATTTCCTCTAGGATATAGAAAAACAGTTGTAGCCTGCTGTCTTAGCAGCAAATCCTCTGGCCCAACCTaGCAGCCCCATCACCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PFPLGYRKTVVACCLSSKSSGPT*QPHHLE Trigger: TTCCAGGTGATGGGGCTGGCAGGTTGGGCCAGAGGA...TTTGCTGCTAAGACAGCAGGCTACAACTGTTTTTCTATATCCTAGAGGAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR TCA 90 bp | GAACTGGTCAGCTACTCCAATTGGAGTCTCCATATGCTTCCTGGCTGGATTTTTGCAAAACCCCAGGTCTaGTTTCATGTTCCTCTCACC | + |
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Preference number: 2 (lower is better) Translates to: ELVSYSNWSLHMLPGWIFAKPQV*FHVPLT Trigger: GGTGAGAGGAACATGAAATCAGACCTGGGGTTTTGC...AAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACCAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACGTTAAATCATGTTCCTCTCACCTaGCCCTATGAGAGGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SAMGSDTCLKTAYSRTLNHVPLT*PYERAE Trigger: TTCTGCCCTCTCATAGGGCCAGGTGAGAGGAACATG...ATTTAACGTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATGTTAAGAACACTAACTaGTCTTCCAAAGGTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LPSVCSCPSISFCQLYSYVKNTN*SSKGPE Trigger: CTCAGGACCTTTGGAAGAGCAGTTAGTGTTCTTAAC...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACGTTAAATTACAAAAATACACTCTaGTGTAGCAACAGGATCATG | + |
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Preference number: 2 (lower is better) Translates to: SAMGSDTCLKTAYSRTLNYKNTL*CSNRIM Trigger: CATGATCCTGTTGCTACATCAGAGTGTATTTTTGTA...ATTTAACGTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR CAA 90 bp | ATATGTAGGTTATATTTAAGTGTATTCTTTGTGCAGTGGATGATTTaGCTGCCCACAGGGGTTCTGGAACCATTTCCTCTAGGATATAGA | + |
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Preference number: 2 (lower is better) Translates to: ICRLYLSVFFVQWMI*LPTGVLEPFPLGYR Trigger: TCTATATCCTAGAGGAAATGGTTCCAGAACCCCTGTGGGCAGCAAAATCATCCACTGCACAAAGAATACACTTAAATATAACCTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCCTCTAGGATATAGAAAAACAGTTGTAGCCTGCTGTCTTAGCAGCAAATACAAAAATACACTCTaGTGTAGCAACAGGATCATG | + |
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Preference number: 2 (lower is better) Translates to: PFPLGYRKTVVACCLSSKYKNTL*CSNRIM Trigger: CATGATCCTGTTGCTACATCAGAGTGTATTTTTGTA...TTTGCTGCTAAGACAGCAGGCTACAACTGTTTTTCTATATCCTAGAGGAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR TCA 72 bp | CTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTaGCTCCCGGCCTGCAGGTCTTGGAGTGGACACATG | + |
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Preference number: 3 (lower is better) Translates to: LWVLSASGREES*LPACRSWSGHM Trigger: CATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR GCA 72 bp | CCTGACTCCCGGCCTGCAGGTCTTGGAGTGGACACATaGTGTACGGGGGATCACCTGGATGCTCATGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PDSRPAGLGVDT*CTGDHLDAHGL Trigger: CAACCCATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CCA 72 bp | GGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTaGACACATGCTGTACGGGGGATCACCTGGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: GGILTPGLQVLE*THAVRGITWML Trigger: GAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACGTTAAATCTGGATGCTCATGGGTaGCAGTGGCCGGTGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SAMGSDTCLKTAYSRTLNLDAHG*QWPVQL Trigger: CAGCTGCACCGGCCACTGCAACCCATGAGCATCCAG...ATTTAACGTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR TCA 72 bp | CCTTTTGCCAACTTTATAGTTATGGATAGCAGCCTATaGGTTTCCAGCTCTGGGAGATGTGGCTCTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: PFANFIVMDSSL*VSSSGRCGSQS Trigger: ACTTTGAGAGCCACATCTCCCAGAGCTGGAAACTCATAGGCTGCTATCCATAACTATAAAGTTGGCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR CCA 72 bp | ACAGCAGTCGATATTGAACTGGTCAGCTACTCCAATTaGAGTCTCCATATGCTTCCTGGCTGGATTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: TAVDIELVSYSN*SLHMLPGWIFT Trigger: TGTAAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACCAGTTCAATATCGACTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| 3UTR CCA 72 bp | ATATGTAGGTTATATTTAAGTGTATTCTTTGTGCAGTaGATGATTTTGCTGCCCACAGGGGTTCTGGAACCA | + |
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Preference number: 3 (lower is better) Translates to: ICRLYLSVFFVQ*MILLPTGVLEP Trigger: TGGTTCCAGAACCCCTGTGGGCAGCAAAATCATCCACTGCACAAAGAATACACTTAAATATAACCTACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR TCA 90 bp | GGTGCTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCCCTGGGACAGCTGCTaGACACGCTGGAGAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GAVGAQCLGEGGILTPGLPWDSC*TRWRAG Trigger: GCCTGCTCTCCAGCGTGTTCAGCAGCTGTCCCAGGG...CAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR CCA 90 bp | GGTGCTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCTGTCTGGAGCTGGGTaGAGCTTCTCCTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GAVGAQCLGEGGILTPGLLSGAG*SFSWQV Trigger: CACCTGCCAGGAGAAGCTCCACCCAGCTCCAGACAG...CAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR TCA 90 bp | CAACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGACTGGGTCAGCAGGGCTaGGCTGCCCGGAGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: QQDHGETCHEGGATTGQGLGQQG*AARSHW Trigger: CCAGTGGCTCCGGGCAGCTCAGCCCTGCTGACCCAG...TCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR CAA 72 bp | GGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTaGGAGTGGACACATGCTGTACGGGGGATCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GEGGILTPGLQV*EWTHAVRGITW Trigger: CCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR TCA 90 bp | GAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTGGACACATGCTGTAGGCCAACTTCCGGGCTaGTTTCCGGGCCCCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGGILTPGLQVLEWTHAVGQLPG*FPGPGE Trigger: TTCACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCC...TACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR TCA 90 bp | CAACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGAAGGGTGCGCCGGCGTTaGCTTGACTGCATGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QQDHGETCHEGGATTGQGRVRRR*LDCMLR Trigger: CCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCT...TCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR CCA 90 bp | AACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGAGGGGTGGAGCTTCTCCTaGCAGGTGAGGCAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NRIMVRHAMREGQQPGREGWSFS*QVRQSL Trigger: CAGGGACTGCCTCACCTGCCAGGAGAAGCTCCACCC...CTCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR CCA 90 bp | AACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGAGACCTGGATGCCATTCTaGTGCAGGGTGCGCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NRIMVRHAMREGQQPGRETWMPF*CRVRRR Trigger: ACGCCGGCGCACCCTGCACCAGAATGGCATCCAGGT...CTCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS-3UTR GCA 90 bp | TGTACGGGGGATCACCTGGATGCTCATGGGTTGCAGTGGCCGGTGCAGCTGGGATTCTGCAGCTGCTTCTaGTCCACCTCCTCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: CTGDHLDAHGLQWPVQLGFCSCF*STSSAS Trigger: TGACGCTGAGGAGGTGGAGCAGAAGCAGCTGCAGAA...TCCCAGCTGCACCGGCCACTGCAACCCATGAGCATCCAGGTGATCCCCCGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGGTCTTGGAGTGGACACATGCTGTACGGGGGATCACCTGGATGCTCATGGGGTGGAGCTTCTCCTaGCAGGTGAGGCAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LQVLEWTHAVRGITWMLMGWSFS*QVRQSL Trigger: CAGGGACTGCCTCACCTGCCAGGAGAAGCTCCACCC...CATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR CCA 90 bp | GGTGCTGTGGGTGCTCAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGACCTTCTCTTCACACTaGAGGATGCACGTCTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: GAVGAQCLGEGGILTPGLTFSSH*RMHVFK Trigger: CTTAAAGACGTGCATCCTCCAGTGTGAAGAGAAGGT...CAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTGAGCACCCACAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR CCA 90 bp | AACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGAGCCGGCCTGCAGGTCTTaGAGTGGACACATGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NRIMVRHAMREGQQPGREPACRS*SGHMLY Trigger: GTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGG...CTCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS-3UTR GCA 90 bp | CAACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGATTCTGCAGCTGCTTCTaGTCCACCTCCTCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: QQDHGETCHEGGATTGQGFCSCF*STSSAS Trigger: TGACGCTGAGGAGGTGGAGCAGAAGCAGCTGCAGAA...TCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR GCA 90 bp | CAACAGGATCATGGTGAGACATGCCATGAGGGAGGGGCAACAACCGGGCAGGGACCCCCAAACCTTTTCTaGAGCTGCTTCTGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QQDHGETCHEGGATTGQGPPNLF*SCFCST Trigger: GGTGGAGCAGAAGCAGCTGCAGAAAAGGTTTGGGGG...TCCCTGCCCGGTTGTTGCCCCTCCCTCATGGCATGTCTCACCATGATCCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR CCA 90 bp | CTGCAGGTCTTGGAGTGGACACATGCTGTACGGGGGATCACCTGGATGCTCATGTACACATTACCATTCTaGTGCAGGGTGCGCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LQVLEWTHAVRGITWMLMYTLPF*CRVRRR Trigger: ACGCCGGCGCACCCTGCACCAGAATGGTAATGTGTA...CATGAGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS-3UTR TCA 90 bp | CTCTCACCTGGCCCTATGAGAGGGCAGAAGATGAGTGAGAAGATGGGGCCATTACGGAGCCACTGGCCATaGCTTTGGTGCATACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSPGPMRGQKMSEKMGPLRSHWP*LWCIQS Trigger: GGACTGTATGCACCAAAGTCATGGCCAGTGGCTCCG...TAATGGCCCCATCTTCTCACTCATCTTCTGCCCTCTCATAGGGCCAGGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGATTTCATGTTCCTCTCACCTGGCCCTATGAGAGGGCAGAAGATGAGTGCGCCGGCGTTGACTTaGCTGCATGCTCAGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RSDFMFLSPGPMRGQKMSAPALT*LHAQDQ Trigger: CTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGC...ACTCATCTTCTGCCCTCTCATAGGGCCAGGTGAGAGGAACATGAAATCAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR TCA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAACCCTGGGACAGCTGCTaGACACGCTGGAGAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKPWDSC*TRWRAG Trigger: GCCTGCTCTCCAGCGTGTTCAGCAGCTGTCCCAGGG...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR TCA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATCTGGGTCAGCAGGGCTaGGCTGCCCGGAGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LPSVCSCPSISFCQLYSYLGQQG*AARSHW Trigger: CCAGTGGCTCCGGGCAGCTCAGCCCTGCTGACCCAG...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR TCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTGGCCAACTTCCGGGCTaGTTTCCGGGCCCCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRGQLPG*FPGPGE Trigger: TTCACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCC...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR TCA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAAGCGCCGGCGTTGACTTaGCTGCATGCTCAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKAPALT*LHAQDQ Trigger: CTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGC...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTTCAGCAGGGCTGAGCTaGCCGGAGCCACTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRSAGLS*PEPLAM Trigger: CATGGCCAGTGGCTCCGGGCAGCTCAGCCCTGCTGA...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGCTACTCCAATTGGAGTCTCCATATGCTTCCTGGCTGGATTTTTACACGCCAGGCTCAGCATCTaGGCCAGGCTCTGCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WSATPIGVSICFLAGFLHARLSI*ARLCIS Trigger: CGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGC...GTGTAAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR GCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTGCCAGGCTCAGCATCTaGGCCAGGCTCTGCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRARLSI*ARLCIS Trigger: CGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGC...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGCTACTCCAATTGGAGTCTCCATATGCTTCCTGGCTGGATTTTTACACCTCCTCAGCGTCATCTaGGCCAGGCTCAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSATPIGVSICFLAGFLHLLSVI*ARLSIC Trigger: GCAGATGCTGAGCCTGGCGCAGATGACGCTGAGGAG...GTGTAAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCACCTGGCCCTATGAGAGGGCAGAAGATGAGTGAGAAGATGGGGCCATTAAACCTTTTCTGCAGCTaGTTCTGCTCCACCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGPMRGQKMSEKMGPLNLFCS*FCSTSS Trigger: TGAGGAGGTGGAGCAGAAGCAGCTGCAGAAAAGGTT...TAATGGCCCCATCTTCTCACTCATCTTCTGCCCTCTCATAGGGCCAGGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGCTCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACCATTCTGGTGCAGGGTaGGCCGGCGTTGACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RGSQSSAMGSDTCLKTAYHSGAG*AGVDLT Trigger: AGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATG...GTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGAGCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATAGGGTGCGCCGGCGTTaGCTTGACTGCATGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSVCSCPSISFCQLYSYRVRRR*LDCMLR Trigger: CCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCT...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCTCTAGGATATAGAAAAACAGTTGTAGCCTGCTGTCTTAGCAGCAAATCAGCAGGGCTGAGCTaGCCGGAGCCACTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PFPLGYRKTVVACCLSSKSAGLS*PEPLAM Trigger: CATGGCCAGTGGCTCCGGGCAGCTCAGCCCTGCTGA...TTTGCTGCTAAGACAGCAGGCTACAACTGTTTTTCTATATCCTAGAGGAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR GCA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAACATTCTGGTGCAGGGTaGGCCGGCGTTGACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKHSGAG*AGVDLT Trigger: AGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATG...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTCTGTCTGGAGCTGGGTaGAGCTTCTCCTGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRLSGAG*SFSWQV Trigger: CACCTGCCAGGAGAAGCTCCACCCAGCTCCAGACAG...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGATTTCATGTTCCTCTCACCTGGCCCTATGAGAGGGCAGAAGATGAGTTGCACGTCTTTAAGTTaGAGCTGTCTGGAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSDFMFLSPGPMRGQKMSCTSLS*SCLELG Trigger: ACCCAGCTCCAGACAGCTTCAACTTAAAGACGTGCA...ACTCATCTTCTGCCCTCTCATAGGGCCAGGTGAGAGGAACATGAAATCAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAATCACTGAACCGCTTCTaGTTGGCCAACTTCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKSLNRF*LANFRA Trigger: AGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGA...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTCCCCCAAACCTTTTCTaGAGCTGCTTCTGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRPPNLF*SCFCST Trigger: GGTGGAGCAGAAGCAGCTGCAGAAAAGGTTTGGGGG...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAAGTTGACTTGACTGCATaGTCAGGACCAGGTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKVDLTA*SGPGTA Trigger: GGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAAC...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACGTTAAATCTGCAGGTCTTGGAGTaGACACATGCTGTACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAMGSDTCLKTAYSRTLNLQVLE*THAVRG Trigger: CCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAG...ATTTAACGTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGCTCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACCTCAGGACCAGGTACTaGCTCATAAACTCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSQSSAMGSDTCLKTAYLRTRY*LINSLN Trigger: GTTCAGTGAGTTTATGAGGCAGTACCTGGTCCTGAG...GTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGAGCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTCCTCTAGGATATAGAAAAACAGTTGTAGCCTGCTGTCTTAGCAGCAAAGAAGCTGTCTGGAGCTaGGTGGAGCTTCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFPLGYRKTVVACCLSSKEAVWS*VELLLA Trigger: TGCCAGGAGAAGCTCCACCCAGCTCCAGACAGCTTC...TTTGCTGCTAAGACAGCAGGCTACAACTGTTTTTCTATATCCTAGAGGAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR CCA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATTCACTGAACCGCTTCTaGTTGGCCAACTTCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVCSCPSISFCQLYSYSLNRF*LANFRA Trigger: AGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGA...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR TCA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTTGCACGTCTTTAAGTTaGAGCTGTCTGGAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRCTSLS*SCLELG Trigger: ACCCAGCTCCAGACAGCTTCAACTTAAAGACGTGCA...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATGTTGACTTGACTGCATaGTCAGGACCAGGTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSVCSCPSISFCQLYSYVDLTA*SGPGTA Trigger: GGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAAC...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCTCTAGGATATAGAAAAACAGTTGTAGCCTGCTGTCTTAGCAGCAAAAACCTTTTCTGCAGCTaGTTCTGCTCCACCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFPLGYRKTVVACCLSSKNLFCS*FCSTSS Trigger: TGAGGAGGTGGAGCAGAAGCAGCTGCAGAAAAGGTT...TTTGCTGCTAAGACAGCAGGCTACAACTGTTTTTCTATATCCTAGAGGAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACGTTAAATCTCAGGACCAGGTACTaGCTCATAAACTCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SAMGSDTCLKTAYSRTLNLRTRY*LINSLN Trigger: GTTCAGTGAGTTTATGAGGCAGTACCTGGTCCTGAG...ATTTAACGTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR CCA 90 bp | ACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACACCTTCTCTTCACACTaGAGGATGCACGTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIICNGIRYVFEDSILTYTFSSH*RMHVFK Trigger: CTTAAAGACGTGCATCCTCCAGTGTGAAGAGAAGGT...GTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| 3UTR CAA 72 bp | TTATATTTAAGTGTATTCTTTGTGCAGTGGATGATTTaGCTGCCCACAGGGGTTCTGGAACCATTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSVFFVQWMI*LPTGVLEPFPL Trigger: TAGAGGAAATGGTTCCAGAACCCCTGTGGGCAGCAAAATCATCCACTGCACAAAGAATACACTTAAATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS GCA 90 bp | AGCGTCATCTGCGCCAGGCTCAGCATCTGCGCCAGGCTCAGCATCTaGGCCAGGCTCTGCATCTCGCACTTGCACCAAGCTCCGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: SVICARLSICARLSI*ARLCISHLHQAPDT Trigger: CGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGATGACGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS GCA 90 bp | TCTGCGCCAGGCTCAGCATCTGCGCCAGGCTCTGCATCTCGCACTTaGACCAAGCTCCGGACACGCGGCATTCTCTTCAGGTGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SAPGSASAPGSASRT*TKLRTRGILFRCCI Trigger: GATGCAGCACCTGAAGAGAATGCCGCGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS GCA 90 bp | GGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTGGACACATaGTGTACGGGGGATCACCTGGATGCCATTCTGGTGCAGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRNPDSRPAGLGVDT*CTGDHLDAILVQGA Trigger: CGCACCCTGCACCAGAATGGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS CCA 90 bp | CTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTaGACACATGCTGTACGGGGGATCACCTGGATGCCATTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGEGGILTPGLQVLE*THAVRGITWMPFWC Trigger: GCACCAGAATGGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS TCA 90 bp | CTTCAGGTGCTGCATCTCCGAGGCCTTTGGCTGGTAAAGAGCAGCTaGCACAAGCTCTGGGTCAGCAGGGCTGAGCTGCCCGGAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQVLHLRGLWLVKSS*HKLWVSRAELPGAT Trigger: AGTGGCTCCGGGCAGCTCAGCCCTGCTGACCCAGAGCTTGTGTCAGCTGCTCTTTACCAGCCAAAGGCCTCGGAGATGCAGCACCTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS TCA 90 bp | CGGGGGATCACCTGGATGCCATTCTGGTGCAGGGTGCGCCGGCGTTaGCTTGACTGCATGCTCAGGACCAGGTACTGCCTCATAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGITWMPFWCRVRRR*LDCMLRTRYCLINS Trigger: TGAGTTTATGAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGCATCCAGGTGATCCCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
||
| CDS CCA 90 bp | ATGCTCAGGACCAGGTACTGCCTCATAAACTCACTGAACCGCTTCTaGTTGGCCAACTTCCGGGCTGATTTCCGGGCCCCGGTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLRTRYCLINSLNRF*LANFRADFRAPVKP Trigger: GGGCTTCACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGAGTTTATGAGGCAGTACCTGGTCCTGAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS TCA 90 bp | GATCACCTGGATGCCATTCTGGTGCAGGGTGCGCCGGCGTTGACTTaGCTGCATGCTCAGGACCAGGTACTGCCTCATAAACTCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DHLDAILVQGAPALT*LHAQDQVLPHKLTE Trigger: TTCAGTGAGTTTATGAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGCATCCAGGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS CCA 90 bp | GTGCATACAGTCCAGAGAGGGCGGGGGAAGACCTTCTCTTCACACTaGAGGATGCACGTCTTTAAGTTGAAGCTGTCTGGAGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHTVQRGRGKTFSSH*RMHVFKLKLSGAGW Trigger: CCACCCAGCTCCAGACAGCTTCAACTTAAAGACGTGCATCCTCCAGTGTGAAGAGAAGGTCTTCCCCCGCCCTCTCTGGACTGTATGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCAACTGGGAAGATGGCTCAGAGGTTAAGAACACTAACTGCTCTTCCAAAGCATCTCCGAGGCCTTaGGCTGGTAAAGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGNWEDGSEVKNTNCSSKASPRP*AGKEQL Trigger: CAGCTGCTCTTTACCAGCCAAAGGCCTCGGAGATGC...TTTGGAAGAGCAGTTAGTGTTCTTAACCTCTGAGCCATCTTCCCAGTTGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGGTCAGCTACTCCAATTGGAGTCTCCATATGCTTCCTGGCTGGATTTTTCTGAACCGCTTCTGGTaGGCCAACTTCCGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ELVSYSNWSLHMLPGWIFLNRFW*ANFRAD Trigger: ATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAG...AAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR CAA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTTGCGCCGGCGTTGACTaGACTGCATGCTCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRCAGVD*TACSGP Trigger: TGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCA...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CAA 90 bp | ACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTACCCCGGCCTGCAGGTCTaGGAGTGGACACATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TIICNGIRYVFEDSILTYPGLQV*EWTHAV Trigger: TACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGG...GTACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATTGCGCCGGCGTTGACTaGACTGCATGCTCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSVCSCPSISFCQLYSYCAGVD*TACSGP Trigger: TGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCA...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGCTACTCCAATTGGAGTCTCCATATGCTTCCTGGCTGGATTTTTACACACCACTGGCCATGACTTaGGTGCATACAGTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GQLLQLESPYASWLDFYTPLAMT*VHTVQR Trigger: TCTCTGGACTGTATGCACCAAAGTCATGGCCAGTGG...TGTGTAAAAATCCAGCCAGGAAGCATATGGAGACTCCAATTGGAGTAGCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
||
| CDS-3UTR CAA 90 bp | TTGCCGTCAGTATGTTCGTGTCCCAGCATCTCCTTTTGCCAACTTTATAGTTATGCATCTCCGAGGCCTTaGGCTGGTAAAGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSVCSCPSISFCQLYSYASPRP*AGKEQL Trigger: CAGCTGCTCTTTACCAGCCAAAGGCCTCGGAGATGC...ATAACTATAAAGTTGGCAAAAGGAGATGCTGGGACACGAACATACTGACGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS-3UTR CAA 90 bp | TCACAATCATCTGCAATGGGATCCGATACGTGTTTGAAGACAGCATACTCACGTCCACTGGCCATGACTTaGGTGCATACAGTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSSAMGSDTCLKTAYSRPLAMT*VHTVQR Trigger: TCTCTGGACTGTATGCACCAAAGTCATGGCCAGTGG...ACGTGAGTATGCTGTCTTCAAACACGTATCGGATCCCATTGCAGATGATTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS GCA 72 bp | AGCATCTGCGCCAGGCTCAGCATCTGCGCCAGGCTCTaGATCTCGCACTTGCACCAAGCTCCGGACACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SICARLSICARL*ISHLHQAPDTR Trigger: CCGCGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGATGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS GCA 72 bp | TGCGCCAGGCTCAGCATCTGCGCCAGGCTCAGCATCTaGGCCAGGCTCTGCATCTCGCACTTGCACCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CARLSICARLSI*ARLCISHLHQA Trigger: AGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGATGCTGAGCCTGGCGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
||
| CDS CAA 90 bp | CAGTGCCTCGGGGAGGGAGGAATCCTGACTCCCGGCCTGCAGGTCTaGGAGTGGACACATGCTGTACGGGGGATCACCTGGATGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: QCLGEGGILTPGLQV*EWTHAVRGITWMPF Trigger: GAATGGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCCCTCCCCGAGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS GCA 72 bp | GGCTCAGCATCTGCGCCAGGCTCTGCATCTCGCACTTaGACCAAGCTCCGGACACGCGGCATTCTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSASAPGSASRT*TKLRTRGILFR Trigger: CCTGAAGAGAATGCCGCGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS CAA 90 bp | ATCTGCGCCAGGCTCAGCATCTGCGCCAGGCTCTGCATCTCGCACTaGCACCAAGCTCCGGACACGCGGCATTCTCTTCAGGTGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: ICARLSICARLCISH*HQAPDTRHSLQVLH Trigger: ATGCAGCACCTGAAGAGAATGCCGCGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCTGGCGCAGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS TCA 72 bp | ACCTGGATGCCATTCTGGTGCAGGGTGCGCCGGCGTTaGCTTGACTGCATGCTCAGGACCAGGTACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TWMPFWCRVRRR*LDCMLRTRYCL Trigger: GAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGCATCCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS GCA 72 bp | TACGGGGGATCACCTGGATGCCATTCTGGTGCAGGGTaGGCCGGCGTTGACTTGACTGCATGCTCAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: YGGSPGCHSGAG*AGVDLTACSGP Trigger: TGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGCATCCAGGTGATCCCCCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS GCA 72 bp | CCTGACTCCCGGCCTGCAGGTCTTGGAGTGGACACATaGTGTACGGGGGATCACCTGGATGCCATTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PDSRPAGLGVDT*CTGDHLDAILV Trigger: CACCAGAATGGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS CCA 72 bp | GGAGGAATCCTGACTCCCGGCCTGCAGGTCTTGGAGTaGACACATGCTGTACGGGGGATCACCTGGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: GGILTPGLQVLE*THAVRGITWMP Trigger: TGGCATCCAGGTGATCCCCCGTACAGCATGTGTCCACTCCAAGACCTGCAGGCCGGGAGTCAGGATTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS CAA 72 bp | AGGCTCAGCATCTGCGCCAGGCTCTGCATCTCGCACTaGCACCAAGCTCCGGACACGCGGCATTCTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RLSICARLCISH*HQAPDTRHSLQ Trigger: CTGAAGAGAATGCCGCGTGTCCGGAGCTTGGTGCAAGTGCGAGATGCAGAGCCTGGCGCAGATGCTGAGCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS CAA 90 bp | CTCAGGACCAGGTACTGCCTCATAAACTCACTGAACCGCTTCTGGTaGGCCAACTTCCGGGCTGATTTCCGGGCCCCGGTGAAGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LRTRYCLINSLNRFW*ANFRADFRAPVKPP Trigger: TGGGGGCTTCACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGAGTTTATGAGGCAGTACCTGGTCCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS TCA 72 bp | CTCACTGAACCGCTTCTGGTTGGCCAACTTCCGGGCTaGTTTCCGGGCCCCGGTGAAGCCCCCAAACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LTEPLLVGQLPG*FPGPGEAPKPF Trigger: AAAAGGTTTGGGGGCTTCACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS CCA 72 bp | ACCAGGTACTGCCTCATAAACTCACTGAACCGCTTCTaGTTGGCCAACTTCCGGGCTGATTTCCGGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TRYCLINSLNRF*LANFRADFRAP Trigger: CGGGGCCCGGAAATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGAGTTTATGAGGCAGTACCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS CAA 72 bp | AGGTACTGCCTCATAAACTCACTGAACCGCTTCTGGTaGGCCAACTTCCGGGCTGATTTCCGGGCCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RYCLINSLNRFW*ANFRADFRAPV Trigger: CACCGGGGCCCGGAAATCAGCCCGGAAGTTGGCCAACCAGAAGCGGTTCAGTGAGTTTATGAGGCAGTACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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| CDS TCA 72 bp | TACACATTACCATTCTGGTGCAGGGTGCGCCGGCGTTaGCTTGACTGCATGCTCAGGACCAGGTACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YTLPFWCRVRRR*LDCMLRTRYCL Trigger: GAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGTAATGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS TCA 72 bp | GATGCCATTCTGGTGCAGGGTGCGCCGGCGTTGACTTaGCTGCATGCTCAGGACCAGGTACTGCCTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: DAILVQGAPALT*LHAQDQVLPHK Trigger: TTTATGAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224594.2 |
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| CDS TCA 72 bp | ATTACCATTCTGGTGCAGGGTGCGCCGGCGTTGACTTaGCTGCATGCTCAGGACCAGGTACTGCCTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: ITILVQGAPALT*LHAQDQVLPHK Trigger: TTTATGAGGCAGTACCTGGTCCTGAGCATGCAGTCAAGTCAACGCCGGCGCACCCTGCACCAGAATGGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059339.6 |
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| CDS CCA 72 bp | GTCCAGAGAGGGCGGGGGAAGACCTTCTCTTCACACTaGAGGATGCACGTCTTTAAGTTGAAGCTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VQRGRGKTFSSH*RMHVFKLKLSG Trigger: TCCAGACAGCTTCAACTTAAAGACGTGCATCCTCCAGTGTGAAGAGAAGGTCTTCCCCCGCCCTCTCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059339.6 ENSMUST00000224594.2 |
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