RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020116

Ensembl transcript IDs: ENSMUST00000020317.8

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTGTGCATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTGCTTCTGCTCTGGCTaGGAGCTGAGAAGAAACCTG +
Preference number: 2 (lower is better)
Translates to: LCICPCGLLTLINCCTFQCFCSG*ELRRNL
Trigger: CAGGTTTCTTCTCAGCTCTCAGCCAGAGCAGAAGCA...CTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
3UTR-3UTR TCA 90 bp ATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATTATCCTAGAAGCAGCTaGGTACAAGTCCTGTTAAAC +
Preference number: 2 (lower is better)
Translates to: ICPCGLLTLINCCTFQYYYPRSS*VQVLLN
Trigger: GTTTAACAGGACTTGTACTCAGCTGCTTCTAGGATA...ATAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
3UTR-3UTR CCA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTAGGGAAATTCTTCCCATaGTTTTATGTGAACATCTCA +
Preference number: 2 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLGKFFP*FYVNIS
Trigger: TGAGATGTTCACATAAAACCATGGGAAGAATTTCCC...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR GCA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATCGGATAAGGGCAAGTaGATCCTCCACCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLSDKGK*ILHLKA
Trigger: GGCTTTCAGGTGGAGGATGCACTTGCCCTTATCCGA...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR TCA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTACTTTTGTCAGGGCACTaGCATCCTTGGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLLLSGH*HPWCLY
Trigger: GTAAAGACACCAAGGATGTCAGTGCCCTGACAAAAG...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR TCA 90 bp ATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATAGTGCATCCTCCACCTaGAAGCCAAGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ICPCGLLTLINCCTFQYYSASST*KPRTKA
Trigger: AGCCTTTGTTCTTGGCTTTCAGGTGGAGGATGCACT...ATAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CCA 90 bp ATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATTGTGTATCTGTTACCTaGGACGGGAATTTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ICPCGLLTLINCCTFQYYCVSVT*DGNFPR
Trigger: ACGAGGAAAATTCCCGTCCCAGGTAACAGATACACA...ATAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR TCA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTAAGGTTAAAGCGTATCTaGAGTCCCAAATGTTCTACA +
Preference number: 4 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLRLKRI*SPKCST
Trigger: TGTAGAACATTTGGGACTTCAGATACGCTTTAACCT...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR GCA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATGGTTTTTCCTCCTTTaGCAGCAATTCTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLWFFLL*QQFFLL
Trigger: CAATAGGAAGAATTGCTGGCAAAGGAGGAAAAACCA...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 90 bp GCGGGAAGACCGGCCTCTTCGCCGGCCGCGCCTCCTCCGTGTCCATaGGTCCGGCTTCTCCATCCTGTCCCGCCGCTGACGACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: AGRPASSPAAPPPCP*VRLLHPVPPLTTAQ
Trigger: CTGAGCAGTCGTCAGCGGCGGGACAGGATGGAGAAGCCGGACGCATGGACACGGAGGAGGCGCGGCCGGCGAAGAGGCCGGTCTTCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS TCA 90 bp CTCCTCCGTGTCCATGCGTCCGGCTTCTCCATCCTGTCCCGCCGCTaGCGACTGCTCAGCCTGTCGTTTCTTCGCCCGGCGGCCCCCTCT +
Preference number: 5 (lower is better)
Translates to: LLRVHASGFSILSRR*RLLSLSFLRPAAPS
Trigger: AGAGGGGGCCGCCGGGCGAAGAAACGACAGGCTGAGCAGTCGTCAGCGGCGGGACAGGATGGAGAAGCCGGACGCATGGACACGGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 90 bp GTGTCCATGCGTCCGGCTTCTCCATCCTGTCCCGCCGCTGACGACTaGTCAGCCTGTCGTTTCTTCGCCCGGCGGCCCCCTCTGTGCGTG +
Preference number: 5 (lower is better)
Translates to: VSMRPASPSCPAADD*SACRFFARRPPLCV
Trigger: CACGCACAGAGGGGGCCGCCGGGCGAAGAAACGACAGGCTGAGCAGTCGTCAGCGGCGGGACAGGATGGAGAAGCCGGACGCATGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 90 bp GACGACTGCTCAGCCTGTCGTTTCTTCGCCCGGCGGCCCCCTCTGTaGGTGACGGGAGTAAAGCCGTCCTCCGTTCCGGTGCTTTGCGTC +
Preference number: 5 (lower is better)
Translates to: DDCSACRFFARRPPL*VTGVKPSSVPVLCV
Trigger: GACGCAAAGCACCGGAACGGAGGACGGCTTTACTCCCGTCACGCACAGAGGGGGCCGCCGGGCGAAGAAACGACAGGCTGAGCAGTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS CCA 90 bp AAATATCTTCATCCAGTTTTCTTTCAACGGTGTGTATCTGTTACCTaGGACGGGAATTTTCCTCGTTTCTTCTTTCCCAGTCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KYLHPVFFQRCVSVT*DGNFPRFFFPSQEL
Trigger: CAGCTCCTGACTGGGAAAGAAGAAACGAGGAAAATTCCCGTCCCAGGTAACAGATACACACCGTTGAAAGAAAACTGGATGAAGATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CAA 90 bp GGCTGGGAAATTCTTCCCATGGTTTTATGTGAACATCTCAAGGGTTCATGGAAATTCTTCCTATTGCCCTaGACAGGTGGTCTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: GWEILPMVLCEHLKGSWKFFLLP*TGGLLL
Trigger: TAAAAGGAGACCACCTGTCAAGGGCAATAGGAAGAA...TTTCCATGAACCCTTGAGATGTTCACATAAAACCATGGGAAGAATTTCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CAA 90 bp GGCTGGGAAATTCTTCCCATGGTTTTATGTGAACATCTCAAGGGTTCATGGAAATTTCCTAGGATGAGGTaGCAAATAGCTGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: GWEILPMVLCEHLKGSWKFPRMR*QIAVLA
Trigger: GGCAAGAACAGCTATTTGCAACCTCATCCTAGGAAA...TTTCCATGAACCCTTGAGATGTTCACATAAAACCATGGGAAGAATTTCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CAA 90 bp ATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATAGGGCACTGACATCCTaGGTGTCTTTACAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ICPCGLLTLINCCTFQYYRALTS*VSLQVL
Trigger: CAGGACTTGTAAAGACACCAAGGATGTCAGTGCCCT...ATAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CAA 90 bp ATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATCAGCAATTCTTCCTATaGCCCTTGACAGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: ICPCGLLTLINCCTFQYYQQFFL*PLTGGL
Trigger: GAGACCACCTGTCAAGGGCAATAGGAAGAATTGCTG...ATAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS TCA 90 bp CAAGTCCTGATTTCTACATTCCTTGATTTCAGGTTAAAGCGTATCTaGAGTCCCAAATGTTCTACAATCGGAGTAAATATCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: QVLISTFLDFRLKRI*SPKCSTIGVNIFIQ
Trigger: CTGGATGAAGATATTTACTCCGATTGTAGAACATTTGGGACTTCAGATACGCTTTAACCTGAAATCAAGGAATGTAGAAATCAGGACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS-3UTR CAA 90 bp CATCTGCCCGTGTGGCTTACTTACACTTATAAACTGCTGTACTTTTCAGTATTATTCTCTATGGTAAATTaGGTTTTTCCTCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: HLPVWLTYTYKLLYFSVLFSMVN*VFPPLP
Trigger: TGGCAAAGGAGGAAAAACCAAATTTACCATAGAGAA...TAATACTGAAAAGTACAGCAGTTTATAAGTGTAAGTAAGCCACACGGGCAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 72 bp CCGGCCTCTTCGCCGGCCGCGCCTCCTCCGTGTCCATaGGTCCGGCTTCTCCATCCTGTCCCGCCGCTGACG +
Preference number: 6 (lower is better)
Translates to: PASSPAAPPPCP*VRLLHPVPPLT
Trigger: CGTCAGCGGCGGGACAGGATGGAGAAGCCGGACGCATGGACACGGAGGAGGCGCGGCCGGCGAAGAGGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 72 bp CGTCCGGCTTCTCCATCCTGTCCCGCCGCTGACGACTaGTCAGCCTGTCGTTTCTTCGCCCGGCGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: RPASPSCPAADD*SACRFFARRPP
Trigger: AGGGGGCCGCCGGGCGAAGAAACGACAGGCTGAGCAGTCGTCAGCGGCGGGACAGGATGGAGAAGCCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS TCA 72 bp GTCCATGCGTCCGGCTTCTCCATCCTGTCCCGCCGCTaGCGACTGCTCAGCCTGTCGTTTCTTCGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: VHASGFSILSRR*RLLSLSFLRPA
Trigger: CGCCGGGCGAAGAAACGACAGGCTGAGCAGTCGTCAGCGGCGGGACAGGATGGAGAAGCCGGACGCATGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS GCA 72 bp TCAGCCTGTCGTTTCTTCGCCCGGCGGCCCCCTCTGTaGGTGACGGGAGTAAAGCCGTCCTCCGTTCCGGTG +
Preference number: 6 (lower is better)
Translates to: SACRFFARRPPL*VTGVKPSSVPV
Trigger: CACCGGAACGGAGGACGGCTTTACTCCCGTCACGCACAGAGGGGGCCGCCGGGCGAAGAAACGACAGGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS CAA 72 bp ACAAAGTCGGCCGCTTTTGTCAGGGCACTGACATCCTaGGTGTCTTTACAAGTCCTGATTTCTACATTCCTT +
Preference number: 6 (lower is better)
Translates to: TKSAAFVRALTS*VSLQVLISTFL
Trigger: AAGGAATGTAGAAATCAGGACTTGTAAAGACACCAAGGATGTCAGTGCCCTGACAAAAGCGGCCGACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS CAA 90 bp CGTGTCCGTGTTACGTTCTCTATGGTAAATTTGGTTTTTCCTCCTTaGCCAGCAATTCTTCCTATTGCCCTTGACAGGTGGTCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RVRVTFSMVNLVFPP*PAILPIALDRWSPF
Trigger: AAAAGGAGACCACCTGTCAAGGGCAATAGGAAGAATTGCTGGCAAAGGAGGAAAAACCAAATTTACCATAGAGAACGTAACACGGACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS TCA 72 bp CTTGGTGTCTTTACAAGTCCTGATTTCTACATTCCTTaGTTTCAGGTTAAAGCGTATCTGAAGTCCCAAATG +
Preference number: 6 (lower is better)
Translates to: LGVFTSPDFYIP*FQVKAYLKSQM
Trigger: CATTTGGGACTTCAGATACGCTTTAACCTGAAATCAAGGAATGTAGAAATCAGGACTTGTAAAGACACCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8
CDS TCA 72 bp ATTTCTACATTCCTTGATTTCAGGTTAAAGCGTATCTaGAGTCCCAAATGTTCTACAATCGGAGTAAATATC +
Preference number: 6 (lower is better)
Translates to: ISTFLDFRLKRI*SPKCSTIGVNI
Trigger: GATATTTACTCCGATTGTAGAACATTTGGGACTTCAGATACGCTTTAACCTGAAATCAAGGAATGTAGAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020317.8