Pregenerated sensors for PNN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020994Ensembl transcript IDs: ENSMUST00000021381.6, ENSMUST00000219176.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTTTTaGTCCTGGATAAGGTCTCTGCGCGTGCGCTCTTTGGAGGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: PNIRRFLCFPFSSMF*SWIRSLRVRSLEVA Trigger: AGCTACCTCCAAAGAGCGCACGCGCAGAGACCTTATCCAGGATCAAAACATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGCCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCAGCTACAACGGAAGATTaGAGTGCTGGCTTTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: RVPINKPNIRRFLCFPFSATTED*SAGFLT Trigger: TGTTAAAAAGCCAGCACTGCAATCTTCCGTTGTAGC...TGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAAGAGTGCCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCTTCTCATCCATGTTTTaGTCCTGGATAAGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLKSAHQQAKYSSVPLLPFSSMF*SWIRSL Trigger: CAGAGACCTTATCCAGGATCAAAACATGGATGAGAA...GGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCACTCTTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTAAAGCTGTAAAAACCTaGCAACTGTTTTCAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VSVIANRKDKTTDSKTKFKAVKT*QLFSGK Trigger: TTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTT...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| 3UTR TCA 72 bp | CGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTTTTaGTCCTGGATAAGGTCTCTGCGCGTGCGCTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: RRFLCFPFSSMF*SWIRSLRVRSL Trigger: CAAAGAGCGCACGCGCAGAGACCTTATCCAGGATCAAAACATGGATGAGAAGGGGAAGCAAAGGAACCGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCACTGCGCGTGCGCTCTTaGGAGGTAGCTACAACGGAA | + |
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Preference number: 3 (lower is better) Translates to: CPSTSQIFVGSFASPSHPLRVRS*EVATTE Trigger: TTCCGTTGTAGCTACCTCCAAAGAGCGCACGCGCAG...TGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAGAGTGCCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTAGCTACAACGGAAGATaGCAGTGCTGGCTTTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: SEECPSTSQIFVGSFASPSYNGR*QCWLFN Trigger: GTTAAAAAGCCAGCACTGCAATCTTCCGTTGTAGCT...AGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCACTCTTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| 3UTR TCA 72 bp | GAGAGGACAAGAGAATGTTGTTCTATAATCGTGAAATaGCAACCAAATCGTACGGTTGAAGTTATCTACCAA | + |
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Preference number: 3 (lower is better) Translates to: ERTRECCSIIVK*QPNRTVEVIYQ Trigger: TTGGTAGATAACTTCAACCGTACGATTTGGTTGTCATTTCACGATTATAGAACAACATTCTCTTGTCCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTAGATTACACTCTAAGTaGTTATCACACAAGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VSVIANRKDKTTDSKTKFRLHSK*LSHKEL Trigger: CAGCTCCTTGTGTGATAACAACTTAGAGTGTAATCT...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | CCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTCGGGTCCCGCCCGGTaGGCTTGCGGATATTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: PINKPNIRRFLCFPFSSMSGPAR*ACGYSR Trigger: ACGAGAATATCCGCAAGCTCACCGGGCGGGACCCGA...CATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| CDS-3UTR TCA 90 bp | AAGGTCTCTGCGCGTGCGCTCTTTGGAGGTAGCTACAACGGAAGATTGCAGTGCTCTCGTCCACATTCTTaGGGCTCTCTTTGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KVSARALFGGSYNGRLQCSRPHS*GSLWPS Trigger: AGAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGA...GCACTGCAATCTTCCGTTGTAGCTACCTCCAAAGAGCGCACGCGCAGAGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGATAAGGTCTCTGCGCGTGCGCTCTTTGGAGGTAGCTACAACGGAAGATGCCAGCAATCTGGCTTaGATGGGCCTCACATCATTC | + |
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Preference number: 4 (lower is better) Translates to: SWIRSLRVRSLEVATTEDASNLA*MGLTSF Trigger: GAATGATGTGAGGCCCATCCAAGCCAGATTGCTGGC...ATCTTCCGTTGTAGCTACCTCCAAAGAGCGCACGCGCAGAGACCTTATCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| CDS-3UTR GCA 90 bp | CCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTTCTCTAGCTGCTCCTaGAAAGCTCTCACGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: PINKPNIRRFLCFPFSSMFSSCS*KALTAT Trigger: GGTCGCCGTGAGAGCTTTGCAGGAGCAGCTAGAGAA...CATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| CDS-3UTR CCA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCATGCTGCTGCCACTGCTaGAGCTGCTCCCGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSCCCHC*SCSRCC Trigger: GCAGCAGCGGGAGCAGCTCCAGCAGTGGCAGCAGCA...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCATACTGCTGCTGCCACTaGTGGAGCTGCTCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSYCCCH*WSCSRC Trigger: GCAGCGGGAGCAGCTCCAGCAGTGGCAGCAGCAGTA...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTGGCAAAGTCTCAGGCTaGCAGAGAGGCTGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSAGKVSG*QRGWDW Trigger: CCAGTCCCAGCCTCTCTGTCAGCCTGAGACTTTGCC...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCACACTCGTGCTGGAGCTaGTGCTGGAGCTGCTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSHSCWS*CWSCFD Trigger: GTCGAAGCAGCTCCAGCAGCAGCTCCAGCACGAGTG...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTCCCCACCCAGCCTACTaGCTGCCCCTTCCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFPHPAY*LPLPGL Trigger: GAGACCTGGAAGGGGCAGTCAGTAGGCTGGGTGGGG...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCATTCGACTACTGCTGCTaGCACTGCTGGAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSFDYCC*HCWSCS Trigger: GGAGCAGCTCCAGCAGTGGCAGCAGCAGTAGTCGAA...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTTCGTGCTGGAGCTGCTaGTGGAGCTGCTTCGACTAC | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSASCWSC*WSCFDY Trigger: GTAGTCGAAGCAGCTCCAGCAGCAGCTCCAGCACGA...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTCGGGTCCCGCCCGGTaGGCTTGCGGATATTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFSGPAR*ACGYSR Trigger: ACGAGAATATCCGCAAGCTCACCGGGCGGGACCCGA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGTGCTTCGACTACTGCTaGTGCCACTGCTGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKCFDYC*CHCWSC Trigger: GCAGCTCCAGCAGTGGCAGCAGCAGTAGTCGAAGCA...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | ACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTTTTGATGCAATCTGGCTTGGATaGGCCTCACATCATTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TSQIFVGSFASPSHPCFDAIWLG*ASHHSG Trigger: ACCCGAATGATGTGAGGCCCATCCAAGCCAGATTGC...ATCAAAACATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
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| CDS-3UTR CCA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCCCAGGTCTCTTTGTTTaGCTGGGGGTCCTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NLATVFRQIKVMKPSKTSPGLFV*LGVLLH Trigger: GTGGAGGAGGACCCCCAGCCAAACAAAGAGACCTGG...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTGCCACAGGCTCAGGTTaGGGCTCAGGTTCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSAATGSG*GSGSFS Trigger: AGAGAAAGAACCTGAGCCCCAACCTGAGCCTGTGGC...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTGCTGCTGTCTCTGCTaGTGCTCCCACTCGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFCCCLC*CSHSCW Trigger: CCAGCACGAGTGGGAGCAGCAGCAGAGACAGCAGCA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTGTCCTCGGCCCCTACTaGGACTCCTACTCTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFVLGPY*DSYSHC Trigger: GCAGTGAGAGTAGGAGTCGCAGTAGGGGCCGAGGAC...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAATCTGGCTTGGATaGGCCTCACATCATTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSAAIWLG*ASHHSG Trigger: ACCCGAATGATGTGAGGCCCATCCAAGCCAGATTGC...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCAGTCTCTTTGTTTGGCTaGGGGTCCTCCTCCACTATC | + |
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Preference number: 4 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSVSLFG*GSSSTI Trigger: GATAGTGGAGGAGGACCCCCAGCCAAACAAAGAGAC...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTTCTCGTCCACATTCTTaGGGCTCTCTTTGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSASRPHS*GSLWPS Trigger: AGAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGA...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTTCTCTAGCTGCTCCTaGAAAGCTCTCACGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSFSSCS*KALTAT Trigger: GGTCGCCGTGAGAGCTTTGCAGGAGCAGCTAGAGAA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTGCAAGCTCAACCTTCTaGTCCAGAAGCCGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFASSTF*SRSRSS Trigger: GGAGCTGCGGCTTCTGGAGCAGAAGGTTGAGCTTGC...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGGCTTGTTTTATTCCTTaGTCGCCCCCTGCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKACFIP*SPPAPA Trigger: AGCAGGAGCAGGGGGCGAGCAAGGAATAAAACAAGC...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGGCCAGCAATCTGGCTTaGATGGGCCTCACATCATTC | + |
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Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKASNLA*MGLTSF Trigger: GAATGATGTGAGGCCCATCCAAGCCAGATTGCTGGC...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGAAAGGGCCAGCAATCTaGCTTGGATGGGCCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKKGPAI*LGWASH Trigger: ATGTGAGGCCCATCCAAGCCAGATTGCTGGCCCTTT...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTGCTGGAGCTGCTGCTaGAGCTGCTTCGACTACTGC | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFCWSCC*SCFDYC Trigger: GCAGTAGTCGAAGCAGCTCCAGCAGCAGCTCCAGCA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTAACTCTTCCTCTCGCTaGGCCACCTTACCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSNSSSR*ATLPSS Trigger: AGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTT...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTACCCAGCCTACTGACTaGCCCTTCCAGGTCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFTQPTD*PFQVSL Trigger: CAAAGAGACCTGGAAGGGGCAGTCAGTAGGCTGGGT...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGTGGAACTACTGCTGCTaGTGCTCCGACTTCTACTCT | + |
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Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKWNYCC*CSDFYS Trigger: AGAGTAGAAGTCGGAGCAGCAGCAGCAGTAGTTCCA...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTATGTACTGTCAAGACTaGCTCTACAGACACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSAMYCQD*LYRHLR Trigger: CCTGAGGTGTCTGTAGAGCCAGTCTTGACAGTACAT...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTCTGGGTCGCTCTCCTaGCGTGATTCTCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFSGSLS*RDSLLV Trigger: GACAAGAAGAGAATCACGCCAGGAGAGCGACCCAGA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| 3UTR CAA 72 bp | CCGGGAGGTGATAACTATAACAGATTACACTCTAAGTaGTTATCACACAAGGAGCTGAGAGGACAAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGGDNYNRLHSK*LSHKELRGQEN Trigger: ATTCTCTTGTCCTCTCAGCTCCTTGTGTGATAACAACTTAGAGTGTAATCTGTTATAGTTATCACCTCCCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR TCA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCTCTACATCATTGTGCTaGTTACCTGTCTCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: NLATVFRQIKVMKPSKTSSTSLC*LPVSSN Trigger: GTTGGAGGAGACAGGTAATCAGCACAATGATGTAGA...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTATTCGTCGGTTCCTTTaGTTCCCCTTCTCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSIRRFL*FPFSSM Trigger: CATGGATGAGAAGGGGAAGCAAAGGAACCGACGAAT...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCATTCCATTCTTCTTaGAGCTGCGCAAGCTCAACC | + |
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Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSSFHSS*SCASST Trigger: GGTTGAGCTTGCGCAGCTGCAAGAAGAATGGAATGA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR GCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCCACGCTCCTTCTGTaGTTCCTATCTCGGTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSSTLLL*FLSRLC Trigger: ACATAACCGAGATAGGAAGCACAGAAGGAGCGTGGA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CCA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCATCCATCACTTCTTCTaGCTGACTATCCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLATVFRQIKVMKPSKTSIHHFF*LTILLL Trigger: AAGCAGCAGGATAGTCAGCCAGAAGAAGTGATGGAT...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTCTCTCTTCTTCAGCCTaGACTTCAAGTTTTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSALSSSA*TSSFCS Trigger: TGAACAAAAACTTGAAGTTCAGGCTGAAGAAGAGAG...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGTCATTACGCACCACCTaGTGCTCTTTTTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKSLRTT*CSFSFI Trigger: AATGAAGGAAAAAGAGCATCAGGTGGTGCGTAATGA...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGACTATGAACTATACCTaGTTCCTTCTCCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKTMNYT*FLLLFL Trigger: GAGGAAGAGGAGAAGGAAGCAGGTATAGTTCATAGT...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTTCTCATCCATGTTTTaGTCCTGGATAAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSFSSMF*SWIRSL Trigger: CAGAGACCTTATCCAGGATCAAAACATGGATGAGAA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTCTCTTTTTCCTTCATTaGTTGTCTTCTAGGCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSLFFLH*LSSRPS Trigger: GCTAGGCCTAGAAGACAATCAATGAAGGAAAAAGAG...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTCAGCAATTACGTGTTTaGCACTTTCCACCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSQQLRV*HFPPSL Trigger: TAGAGATGGTGGAAAGTGTCAAACACGTAATTGCTG...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGACTACTACCACCTTTTaGAGACTTGTGACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKTTTTF*RLVTSF Trigger: GAAAGAAGTCACAAGTCTTCAAAAGGTGGTAGTAGT...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGTTTGTCTTTCCTGTCTaGTTTTCGGTCTCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKFVFPV*FSVSFT Trigger: AGTGAAAGAGACCGAAAATCAGACAGGAAAGACAAA...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTGTTCTGCAAATTCGATaGGTCTACCTTCAAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSAVLQIR*VYLQIK Trigger: CTTTATTTGAAGGTAGACGCATCGAATTTGCAGAAC...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTTCTTCTATTAGCTTTTaGGTAGCTGGACACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQHPLYKVILLLIKTSSASSISF*VAGHIL Trigger: AAGAATGTGTCCAGCTACCCAAAAGCTAATAGAAGA...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGGCTAGTTTCATTTTCTaGAGGCTCTATACTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VILLLIKTSSAAKNRLSKASFIF*RLYTFN Trigger: GTTGAAAGTATAGAGCCTTCAGAAAATGAAACTAGC...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTCTTGCTTTTGTTTTCTaGATGTACTGTCAAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSLAFVF*MYCQDW Trigger: CCAGTCTTGACAGTACATTCAGAAAACAAAAGCAAG...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR TCA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCGGAACTCTTATCCTTTaGTCCTTTTGTATCTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: NLATVFRQIKVMKPSKTSGTLIL*SFCIST Trigger: AGTAGAGATACAAAAGGATCAAAGGATAAGAGTTCC...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTGCTACAACGGAAGATTaGAGTGCTGGCTTTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFATTED*SAGFLT Trigger: TGTTAAAAAGCCAGCACTGCAATCTTCCGTTGTAGC...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTGTTTCCATTACTTCCTaGTCAGCAATTACGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRQHPLYKVILLLIKTSVSITS*SAITCL Trigger: CAAACACGTAATTGCTGAGCAGGAAGTAATGGAAAC...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTCCGACTTCTACTCTTaGTTGTTTTATTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFSDFYS*LFYSLL Trigger: GAGCAAGGAATAAAACAAGCAAGAGTAGAAGTCGGA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTTCTTGAAGATCTTTTaGCTGATCGACTACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVIANRKDKTTDSKTKFFLKIF*LIDYSL Trigger: CAGAGAGTAGTCGATCAGGCAAAAGATCTTCAAGAA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS TCA 90 bp | TGCTGGCTTTTTAACATCATCGTCTTCTGGGTCGCTCTCCTGGCGTaGTTCTCTTCTTGTCCGACGCTCCCCACCCAGCCTACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CWLFNIIVFWVALLA*FSSCPTLPTQPTDC Trigger: GCAGTCAGTAGGCTGGGTGGGGAGCGTCGGACAAGAAGAGAATCACGCCAGGAGAGCGACCCAGAAGACGATGATGTTAAAAAGCCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS GCA 90 bp | AGCTGCGCAAGCTCAACCTTCTGCTCCAGAAGCCGCAGCTCCGTCTaGTTAGCACGTCTCTCCTCAAACAGTTCTCGCCTCTCGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCASSTFCSRSRSSV*LARLSSNSSRLSFS Trigger: TGAAAACGAGAGGCGAGAACTGTTTGAGGAGAGACGTGCTAAGCAGACGGAGCTGCGGCTTCTGGAGCAGAAGGTTGAGCTTGCGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS GCA 90 bp | TCTAGTCCTGAAGTATCCCTTCGCTTCCGGTCCACGCTCCTTCTGTaGTTCCTATCTCGGTTATGTCCTCGGCCCCTACTGCGACTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSPEVSLRFRSTLLL*FLSRLCPRPLLRLL Trigger: TAGGAGTCGCAGTAGGGGCCGAGGACATAACCGAGATAGGAAGCACAGAAGGAGCGTGGACCGGAAGCGAAGGGATACTTCAGGACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS CCA 90 bp | TGCAGTGCTGGCTTTTTAACATCATCGTCTTCTGGGTCGCTCTCCTaGCGTGATTCTCTTCTTGTCCGACGCTCCCCACCCAGCCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: CSAGFLTSSSSGSLS*RDSLLVRRSPPSLL Trigger: CAGTAGGCTGGGTGGGGAGCGTCGGACAAGAAGAGAATCACGCCAGGAGAGCGACCCAGAAGACGATGATGTTAAAAAGCCAGCACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS GCA 90 bp | TTATGTTCATTCCATTCTTCTTGCAGCTGCGCAAGCTCAACCTTCTaGTCCAGAAGCCGCAGCTCCGTCTGCTTAGCACGTCTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCSFHSSCSCASSTF*SRSRSSVCLARLSS Trigger: TGAGGAGAGACGTGCTAAGCAGACGGAGCTGCGGCTTCTGGAGCAGAAGGTTGAGCTTGCGCAGCTGCAAGAAGAATGGAATGAACATAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTCATCCATGTTTTGATTCCCGCCCGGTGAGCTaGCGGATATTCTCGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSQIFVGSFASPSHPCFDSRPVS*RIFSST Trigger: TGTGGACGAGAATATCCGCAAGCTCACCGGGCGGGA...ATCAAAACATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGTGCCCATCAACAAGCCAAATATTCGTCGGTTCCTTTGCTTCCCCTTCTTTCTCGTCCACATTCTaGAGGCTCTCTTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EECPSTSQIFVGSFASPSFSSTF*RLSLAF Trigger: GAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAA...AGAAGGGGAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCACTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219176.2 |
||
| CDS-3UTR CAA 90 bp | GAACTATTCCCTGTCAAAGCTGTAAAAACCTGGCAACTGTTTTCAGGCAAATCATCCCGCCCGGTGAGCTaGCGGATATTCTCGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ELFPVKAVKTWQLFSGKSSRPVS*RIFSST Trigger: TGTGGACGAGAATATCCGCAAGCTCACCGGGCGGGA...TGATTTGCCTGAAAACAGTTGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGCCCTTCCAGGTCTCTTaGTTTGGCTGGGGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKPFQVS*FGWGSS Trigger: GGAGGACCCCCAGCCAAACAAAGAGACCTGGAAGGG...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTAGCCACAGGCTCAGGTaGGGGCTCAGGTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQHPLYKVILLLIKTSSASHRLR*GLRFFL Trigger: GAGAAAGAACCTGAGCCCCAACCTGAGCCTGTGGCT...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTGGCGTGATTCTCTTCTaGTCCGACGCTCCCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRQHPLYKVILLLIKTSGVILF*SDAPHP Trigger: TGGGTGGGGAGCGTCGGACAAGAAGAGAATCACGCC...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGCTGCGCGTGCGCTCTTaGGAGGTAGCTACAACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKLRVRS*EVATTE Trigger: TTCCGTTGTAGCTACCTCCAAAGAGCGCACGCGCAG...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCTGCTTGTTTTATTCCTaGCTCGCCCCCTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLATVFRQIKVMKPSKTSCLFYS*LAPCSC Trigger: GCAGGAGCAGGGGGCGAGCAAGGAATAAAACAAGCA...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTCCAGGTCTCTTTGTTaGGCTGGGGGTCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFSRSLC*AGGPPP Trigger: TGGAGGAGGACCCCCAGCCAAACAAAGAGACCTGGA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS TCA 90 bp | TTTGATCCTTTTGTATCTCTACTACTACCACCTTTTGAAGACTTGTaGCTTCTTTCTAGTCCTGAAGTATCCCTTCGCTTCCGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FDPFVSLLLPPFEDL*LLSSPEVSLRFRST Trigger: CGTGGACCGGAAGCGAAGGGATACTTCAGGACTAGAAAGAAGTCACAAGTCTTCAAAAGGTGGTAGTAGTAGAGATACAAAAGGATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTGGCCAGCAATCTGGCTaGGATGGGCCTCACATCATT | + |
|
Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFGQQSG*DGPHII Trigger: AATGATGTGAGGCCCATCCAAGCCAGATTGCTGGCC...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | AACCTGGCAACTGTTTTCAGGCAAATCAAAGTGATGAAACCTTCAAAAACATCCCTCCATTTCCTGCTTTaGTTCCTCCTCCTCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLATVFRQIKVMKPSKTSLHFLL*FLLLLF Trigger: GAACAGGAGGAGGAGGAACAAAAGCAGGAAATGGAG...GGATGTTTTTGAAGGTTTCATCACTTTGATTTGCCTGAAAACAGTTGCCAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGTTCATTCCATTCTTCTaGCAGCTGCGCAAGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKFIPFF*QLRKLN Trigger: GTTGAGCTTGCGCAGCTGCAAGAAGAATGGAATGAA...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS GCA 90 bp | TCTGAAGGCTCTATACTTTCAACTTGGTTAGTTTCCATTACTTCCTaGTCAGCAATTACGTGTTTGACACTTTCCACCATCTCTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SEGSILSTWLVSITS*SAITCLTLSTISST Trigger: TGTGCTAGAGATGGTGGAAAGTGTCAAACACGTAATTGCTGAGCAGGAAGTAATGGAAACTAACCAAGTTGAAAGTATAGAGCCTTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTTCTCGTCCACATTCTaGAGGCTCTCTTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFFSSTF*RLSLAF Trigger: GAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGGACTTCTACTCTTGCTaGTTTTATTCCTTGCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKDFYSC*FYSLLA Trigger: GGCGAGCAAGGAATAAAACAAGCAAGAGTAGAAGTC...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTCTGCTGGTCTCTTTCACTTCTaGAAGATCTTTTGCCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: RQHPLYKVILLLIKTSSAGLFHF*KIFCLI Trigger: GATCAGGCAAAAGATCTTCAAGAAGTGAAAGAGACC...AGCAGAAGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTAGCTACAACGGAAGATaGCAGTGCTGGCTTTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FLRQHPLYKVILLLIKTSSYNGR*QCWLFN Trigger: GTTAAAAAGCCAGCACTGCAATCTTCCGTTGTAGCT...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGCTTCTCATCCATGTTTaGATCCTGGATAAGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKLLIHV*ILDKVS Trigger: AGAGACCTTATCCAGGATCAAAACATGGATGAGAAG...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTATTCGTCGGTTCCTTaGCTTCCCCTTCTCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFYSSVP*LPLLIH Trigger: ATGGATGAGAAGGGGAAGCAAAGGAACCGACGAATA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGCTCCGACTTCTACTCTaGCTTGTTTTATTCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKLRLLL*LVLFLA Trigger: AGCAAGGAATAAAACAAGCAAGAGTAGAAGTCGGAG...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
||
| CDS-3UTR CAA 90 bp | GTAATCCTTTTACTCATCAAGACATCTTCTGCTGCAAAGAATAGGCTAAGCAAGGGGAACTCTTATCCTTaGATCCTTTTGTATCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VILLLIKTSSAAKNRLSKGNSYP*ILLYLY Trigger: GTAGAGATACAAAAGGATCAAAGGATAAGAGTTCCC...CTTGCTTAGCCTATTCTTTGCAGCAGAAGATGTCTTGATGAGTAAAAGGATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTAGAACAAATGGGGCTTaGTCTTGGTCCTTATATACT | + |
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Preference number: 5 (lower is better) Translates to: FLRQHPLYKVILLLIKTSRTNGA*SWSLYT Trigger: AGTATATAAGGACCAAGACAAAGCCCCATTTGTTCT...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTTCAGCAATTACGTGTTaGACACTTTCCACCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFSAITC*TLSTIS Trigger: AGAGATGGTGGAAAGTGTCAAACACGTAATTGCTGA...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | GTTTCAGTTATAGCCAACAGAAAAGACAAGACCACAGATTCAAAAACCAAGTTTCTTCTTGAAGATCTTTaGCCTGATCGACTACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VSVIANRKDKTTDSKTKFLLEDL*PDRLLS Trigger: AGAGAGTAGTCGATCAGGCAAAAGATCTTCAAGAAG...AAACTTGGTTTTTGAATCTGTGGTCTTGTCTTTTCTGTTGGCTATAACTGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS TCA 90 bp | ATCAAATTCCATCTCTGGCTCCAATTCTTTGCTAGTTTCATTTTCTaGAGGCTCTATACTTTCAACTTGGTTAGTTTCCATTACTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: IKFHLWLQFFASFIF*RLYTFNLVSFHYFL Trigger: CAGGAAGTAATGGAAACTAACCAAGTTGAAAGTATAGAGCCTTCAGAAAATGAAACTAGCAAAGAATTGGAGCCAGAGATGGAATTTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTACTACTACCACCTTTaGAAGACTTGTGACTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FLRQHPLYKVILLLIKTSYYYHL*KTCDFF Trigger: AAAGAAGTCACAAGTCTTCAAAAGGTGGTAGTAGTA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGGCAGCATCCTCTTTACAAGGTAATCCTTTTACTCATCAAGACATCTTATCCTTTGATCCTTTaGTATCTCTACTACTACCAC | + |
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Preference number: 5 (lower is better) Translates to: FLRQHPLYKVILLLIKTSYPLIL*YLYYYH Trigger: GTGGTAGTAGTAGAGATACAAAAGGATCAAAGGATA...AGATGTCTTGATGAGTAAAAGGATTACCTTGTAAAGAGGATGCTGCCTTAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 90 bp | CCGGTGAGCTTGCGGATATTCTCGTCCACATTCTTGAGGCTCTCTTaGGCCTTCTCTAGCTGCTCCTGCAAAGCTCTCACGGCGACCGCC | + |
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Preference number: 6 (lower is better) Translates to: PVSLRIFSSTFLRLS*AFSSCSCKALTATA Trigger: GGCGGTCGCCGTGAGAGCTTTGCAGGAGCAGCTAGAGAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAATATCCGCAAGCTCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021381.6 ENSMUST00000219176.2 |
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| CDS CAA 90 bp | CTGGCTTGGATGGGCCTCACATCATTCGGGTCCCGCCCGGTGAGCTaGCGGATATTCTCGTCCACATTCTTGAGGCTCTCTTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LAWMGLTSFGSRPVS*RIFSSTFLRLSLAF Trigger: GAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAATATCCGCAAGCTCACCGGGCGGGACCCGAATGATGTGAGGCCCATCCAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021381.6 ENSMUST00000219176.2 |
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| CDS CAA 90 bp | TTCGGGTCCCGCCCGGTGAGCTTGCGGATATTCTCGTCCACATTCTaGAGGCTCTCTTTGGCCTTCTCTAGCTGCTCCTGCAAAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FGSRPVSLRIFSSTF*RLSLAFSSCSCKAL Trigger: GAGAGCTTTGCAGGAGCAGCTAGAGAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAATATCCGCAAGCTCACCGGGCGGGACCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021381.6 ENSMUST00000219176.2 |
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| CDS GCA 72 bp | AGCTCAACCTTCTGCTCCAGAAGCCGCAGCTCCGTCTaGTTAGCACGTCTCTCCTCAAACAGTTCTCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSTFCSRSRSSV*LARLSSNSSRL Trigger: GAGGCGAGAACTGTTTGAGGAGAGACGTGCTAAGCAGACGGAGCTGCGGCTTCTGGAGCAGAAGGTTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS GCA 72 bp | GAAGTATCCCTTCGCTTCCGGTCCACGCTCCTTCTGTaGTTCCTATCTCGGTTATGTCCTCGGCCCCTACTG | + |
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Preference number: 6 (lower is better) Translates to: EVSLRFRSTLLL*FLSRLCPRPLL Trigger: CAGTAGGGGCCGAGGACATAACCGAGATAGGAAGCACAGAAGGAGCGTGGACCGGAAGCGAAGGGATACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 72 bp | CGCCCGGTGAGCTTGCGGATATTCTCGTCCACATTCTaGAGGCTCTCTTTGGCCTTCTCTAGCTGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RPVSLRIFSSTF*RLSLAFSSCSC Trigger: GCAGGAGCAGCTAGAGAAGGCCAAAGAGAGCCTCAAGAATGTGGACGAGAATATCCGCAAGCTCACCGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021381.6 ENSMUST00000219176.2 |
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| CDS CAA 72 bp | ATGGGCCTCACATCATTCGGGTCCCGCCCGGTGAGCTaGCGGATATTCTCGTCCACATTCTTGAGGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: MGLTSFGSRPVS*RIFSSTFLRLS Trigger: AGAGAGCCTCAAGAATGTGGACGAGAATATCCGCAAGCTCACCGGGCGGGACCCGAATGATGTGAGGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021381.6 ENSMUST00000219176.2 |
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| CDS TCA 72 bp | TTTAACATCATCGTCTTCTGGGTCGCTCTCCTGGCGTaGTTCTCTTCTTGTCCGACGCTCCCCACCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FNIIVFWVALLA*FSSCPTLPTQP Trigger: AGGCTGGGTGGGGAGCGTCGGACAAGAAGAGAATCACGCCAGGAGAGCGACCCAGAAGACGATGATGTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS GCA 72 bp | TTCCATTCTTCTTGCAGCTGCGCAAGCTCAACCTTCTaGTCCAGAAGCCGCAGCTCCGTCTGCTTAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: FHSSCSCASSTF*SRSRSSVCLAR Trigger: ACGTGCTAAGCAGACGGAGCTGCGGCTTCTGGAGCAGAAGGTTGAGCTTGCGCAGCTGCAAGAAGAATGGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CCA 72 bp | GGCTTTTTAACATCATCGTCTTCTGGGTCGCTCTCCTaGCGTGATTCTCTTCTTGTCCGACGCTCCCCACCC | + |
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Preference number: 6 (lower is better) Translates to: GFLTSSSSGSLS*RDSLLVRRSPP Trigger: GGGTGGGGAGCGTCGGACAAGAAGAGAATCACGCCAGGAGAGCGACCCAGAAGACGATGATGTTAAAAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS GCA 72 bp | TGGAACTACTGCTGCTGCTGCTCCGACTTCTACTCTTaGTTGTTTTATTCCTTGCTCGCCCCCTGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: WNYCCCCSDFYS*LFYSLLAPCSC Trigger: GCAGGAGCAGGGGGCGAGCAAGGAATAAAACAAGCAAGAGTAGAAGTCGGAGCAGCAGCAGCAGTAGTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 90 bp | TGTCTCCTCCAACTCTTCCTCTCGCTGAGCCACCTTACCCTCTTCTaGTTCCGCCTTCTGTTCTTCATTACGCACCACCTGATGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CLLQLFLSLSHLTLF*FRLLFFITHHLMLF Trigger: AAAGAGCATCAGGTGGTGCGTAATGAAGAACAGAAGGCGGAACAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGGAGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS GCA 72 bp | CGCGTGCGCTCTTTGGAGGTAGCTACAACGGAAGATTaGAGTGCTGGCTTTTTAACATCATCGTCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RVRSLEVATTED*SAGFLTSSSSG Trigger: CCCAGAAGACGATGATGTTAAAAAGCCAGCACTGCAATCTTCCGTTGTAGCTACCTCCAAAGAGCGCACGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 90 bp | TCAACTTGGTTAGTTTCCATTACTTCCTGCTCAGCAATTACGTGTTaGACACTTTCCACCATCTCTAGCACATCCATCACTTCTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: STWLVSITSCSAITC*TLSTISSTSITSSG Trigger: GCCAGAAGAAGTGATGGATGTGCTAGAGATGGTGGAAAGTGTCAAACACGTAATTGCTGAGCAGGAAGTAATGGAAACTAACCAAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 72 bp | TTAGTTTCCATTACTTCCTGCTCAGCAATTACGTGTTaGACACTTTCCACCATCTCTAGCACATCCATCACT | + |
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Preference number: 6 (lower is better) Translates to: LVSITSCSAITC*TLSTISSTSIT Trigger: AGTGATGGATGTGCTAGAGATGGTGGAAAGTGTCAAACACGTAATTGCTGAGCAGGAAGTAATGGAAACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 72 bp | TTCTGTCAGGGCGGGAACTCTTATCCTTTGATCCTTTaGTATCTCTACTACTACCACCTTTTGAAGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: FCQGGNSYPLIL*YLYYYHLLKTC Trigger: ACAAGTCTTCAAAAGGTGGTAGTAGTAGAGATACAAAAGGATCAAAGGATAAGAGTTCCCGCCCTGACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS TCA 72 bp | TTTGTATCTCTACTACTACCACCTTTTGAAGACTTGTaGCTTCTTTCTAGTCCTGAAGTATCCCTTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FVSLLLPPFEDL*LLSSPEVSLRF Trigger: GAAGCGAAGGGATACTTCAGGACTAGAAAGAAGTCACAAGTCTTCAAAAGGTGGTAGTAGTAGAGATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 90 bp | AACTCTTATCCTTTGATCCTTTTGTATCTCTACTACTACCACCTTTaGAAGACTTGTGACTTCTTTCTAGTCCTGAAGTATCCCTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: NSYPLILLYLYYYHL*KTCDFFLVLKYPFA Trigger: AGCGAAGGGATACTTCAGGACTAGAAAGAAGTCACAAGTCTTCAAAAGGTGGTAGTAGTAGAGATACAAAAGGATCAAAGGATAAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS TCA 72 bp | TTCATTACGCACCACCTGATGCTCTTTTTCCTTCATTaGTTGTCTTCTAGGCCTAGCCTCCATTTTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: FITHHLMLFFLH*LSSRPSLHFIY Trigger: ATAAATAAAATGGAGGCTAGGCCTAGAAGACAATCAATGAAGGAAAAAGAGCATCAGGTGGTGCGTAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS GCA 72 bp | TCTATACTTTCAACTTGGTTAGTTTCCATTACTTCCTaGTCAGCAATTACGTGTTTGACACTTTCCACCATC | + |
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Preference number: 6 (lower is better) Translates to: SILSTWLVSITS*SAITCLTLSTI Trigger: GATGGTGGAAAGTGTCAAACACGTAATTGCTGAGCAGGAAGTAATGGAAACTAACCAAGTTGAAAGTATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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| CDS CAA 72 bp | TCTGATTTTCGGTCTCTTTCACTTCTTGAAGATCTTTaGCCTGATCGACTACTCTCTGATATAGACCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SDFRSLSLLEDL*PDRLLSDIDLF Trigger: AAAAAGGTCTATATCAGAGAGTAGTCGATCAGGCAAAAGATCTTCAAGAAGTGAAAGAGACCGAAAATCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021381.6 |
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