Pregenerated sensors for PNMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038216Ensembl transcript IDs: ENSMUST00000041301.8
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTCCTCCAGGGCCCCAATaGGGAGGAGATGACCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GSTSGDKDFGRHRTPGIFPPGPQ*GGDDPR Trigger: CCGGGGGTCATCTCCTCCTCATTGGGGCCCTGGAGG...AAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR GCA 90 bp | CCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGGGAGGCGCGTAGTTGTTaGGGAGATAGGCGCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLQVIRTLGGTGHLAFLGEARSC*GDRRGA Trigger: AGCCCCGCGCCTATCTCCGCAACAACTACGCGCCTC...CCCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | TCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGGCAGAGGGACCAGACTaGGAGTTCCCAGGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: STSGDKDFGRHRTPGIFGAEGPD*EFPGAG Trigger: CCCAGCCCCTGGGAACTCCCAGTCTGGTCCCTCTGC...CCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | TTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTGCACCACAGACAGCCTaGCCTCCCCAGCAAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: LGSTSGDKDFGRHRTPGIAPQTA*PPQQGT Trigger: GGTACCTTGCTGGGGAGGCCAGGCTGTCTGTGGTGC...AATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | CCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGGAGCAGTGTGGTGATGTaGTGCAAAGCCCGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLQVIRTLGGTGHLAFLGSSVVM*CKARWK Trigger: CTTCCAGCGGGCTTTGCATCACATCACCACACTGCT...CCCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | TCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGACCCTCGCTCGAAGCTaGCGTTCTTTCTCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: STSGDKDFGRHRTPGIFGTLARS*RSFSCQ Trigger: CTGGCAGGAGAAAGAACGCCAGCTTCGAGCGAGGGT...CCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GGAACTGTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACCCAATGAGGAGGAGATaGCCCCCGGGCCTCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GTVTLLGSTSGDKDFGRHPMRRR*PPGLSS Trigger: ACTGCTGAGGCCCGGGGGTCATCTCCTCCTCATTGG...GTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGACAGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGAGAGGTGGGCAGGCATaGTGTAGGTGCGAAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VPLQVIRTLGGTGHLAFLRGGQA*CRCEAL Trigger: GAGAGCTTCGCACCTACATCATGCCTGCCCACCTCT...CAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GGAACTGTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACCAGGCACTGAGCAGCTaGTATATGGTGGGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GTVTLLGSTSGDKDFGRHQALSS*YMVGPE Trigger: CTCCGGCCCCACCATATATCAGCTGCTCAGTGCCTG...GTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGACAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTAGTGGGCACAGGCACTaGGCAGCTGATATATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSTSGDKDFGRHRTPGIFSGHRH*AADIWW Trigger: CCACCATATATCAGCTGCTCAGTGCCTGTGCCCACT...AAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | TCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGCCAGCTCCTGACGGTTaGCTTCCAAGAAGTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: STSGDKDFGRHRTPGIFGPAPDG*LPRSLS Trigger: TGACAGACTTCTTGGAAGTCAACCGTCAGGAGCTGG...CCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | ACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGGGCCCAAAGAAGATGCCTTTaGCATCATCTACCCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSGDKDFGRHRTPGIFGAQRRCL*HHLPPC Trigger: GCACGGGGGTAGATGATGTCAAAGGCATCTTCTTTG...GGCCCCAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | ACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTCCAGTCAAAGGCTCCTaGCTCCTCTCGCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TLLGSTSGDKDFGRHRTPPVKGS*LLSQPE Trigger: CTCTGGCTGCGAGAGGAGCCAGGAGCCTTTGACTGG...AGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACAGCCTCAGCAGTGTGGTaGTGTGATGCAAAGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VTLLGSTSGDKDFGRHRTASAVW*CDAKPA Trigger: AGCGGGCTTTGCATCACATCACCACACTGCTGAGGC...TGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR GCA 90 bp | ACTGTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGTCCATCTCTGCAGCGTaGTTCGGGTCTGAGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: TVTLLGSTSGDKDFGRHRSISAA*FGSEPL Trigger: GAGTGGCTCAGACCCGAAGCACGCTGCAGAGATGGA...CCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGGGAGTTCCCAGGGGCTaGGGCTTGTGCACATCGATA | + |
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Preference number: 4 (lower is better) Translates to: TVTLLGSTSGDKDFGRHRGVPRG*GLCTSI Trigger: TATCGATGTGCACAAGCCCCAGCCCCTGGGAACTCC...CCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | GTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGGAAGCTAGTAAGATCTaGGCTCACAGCCTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VPLQVIRTLGGTGHLAFLEASKI*AHSLQA Trigger: TGCCTGGAGGCTGTGAGCCCAGATCTTACTAGCTTC...CAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTTGCACCTCCATCTTCTaGGCCCAGGCAAAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: GSTSGDKDFGRHRTPGIFCTSIF*AQAKKM Trigger: CATCTTCTTTGCCTGGGCCCAGAAGATGGAGGTGCA...AAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | GTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATTTTTGAGAAGTCTGTCATGGTaGTGTCCTCAAAGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VPLQVIRTLGGTGHLAFLRSLSW*CPQSGH Trigger: GTGCCCACTTTGAGGACATCACCATGACAGACTTCT...CAAAAATGCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | ACTGTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGCAGAGTCCCAGCTCCTaGCGGTTGACTTCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVTLLGSTSGDKDFGRHRQSPSS*RLTSKK Trigger: CTTCTTGGAAGTCAACCGTCAGGAGCTGGGACTCTG...CCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR TCA 90 bp | TTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACACCTGGCATGAGGCAGGCATGCTaGCTATACACACTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LLGSTSGDKDFGRHRTPGMRQAC*LYTLQS Trigger: TGACTGGAGTGTGTATAGTCAGCATGCCTGCCTCAT...GCCAGGTGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 90 bp | CGCCATCAGGGTTGCTCAGGTCTCCACGAGGAGGCGCGTAGTTGTTaGGGAGATAGGCGCGGGGCTCGAAGCGCTGGTAAGCCAAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RHQGCSGLHEEARSC*GDRRGARSAGKPRR Trigger: TCGCCTTGGCTTACCAGCGCTTCGAGCCCCGCGCCTATCTCCGCAACAACTACGCGCCTCCTCGTGGAGACCTGAGCAACCCTGATGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 90 bp | GCAGGCAGAGGGACCAGACTGGGAGTTCCCAGGGGCTGGGGCTTGTaGACATCGATAGGCAGGACTCGCTTCACCCTCGCTCGAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AGRGTRLGVPRGWGL*TSIGRTRFTLARSW Trigger: CCAGCTTCGAGCGAGGGTGAAGCGAGTCCTGCCTATCGATGTGCACAAGCCCCAGCCCCTGGGAACTCCCAGTCTGGTCCCTCTGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 90 bp | ACAGCTACCTGGCCAGCGTCGGAGTCAGGGTCCATCTCTGCAGCGTaGTTCGGGTCTGAGCCACTCCCTGTAGCGTGCTTCAGGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TATWPASESGSISAA*FGSEPLPVACFRSE Trigger: CTCAGACCTGAAGCACGCTACAGGGAGTGGCTCAGACCCGAAGCACGCTGCAGAGATGGACCCTGACTCCGACGCTGGCCAGGTAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 90 bp | CTTGTGCCATGCAGCGCAGCTTCCAAGGCCCGACGCCATCAGGGTTaGTCAGGTCTCCACGAGGAGGCGCGTAGTTGTTGCGGAGATAGG | + |
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Preference number: 5 (lower is better) Translates to: LVPCSAASKARRHQG*SGLHEEARSCCGDR Trigger: CCTATCTCCGCAACAACTACGCGCCTCCTCGTGGAGACCTGAGCAACCCTGATGGCGTCGGGCCTTGGAAGCTGCGCTGCATGGCACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 90 bp | ATCAATGAGAACCCGTCCCGACACCTCACCGGTAGCAAAGACTTGTaGCATGCAGCGCAGCTTCCAAGGCCCGACGCCATCAGGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: INENPSRHLTGSKDL*HAAQLPRPDAIRVA Trigger: AGCAACCCTGATGGCGTCGGGCCTTGGAAGCTGCGCTGCATGGCACAAGTCTTTGCTACCGGTGAGGTGTCGGGACGGGTTCTCATTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CCA 90 bp | CAGTGTGGTGATGTGATGCAAAGCCCGCTGGAAGCTAGTAAGATCTaGGCTCACAGCCTCCAGGCAGAAGGCAGAGACCAAGGCGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: QCGDVMQSPLEASKI*AHSLQAEGRDQGVG Trigger: GCCGACGCCTTGGTCTCTGCCTTCTGCCTGGAGGCTGTGAGCCCAGATCTTACTAGCTTCCAGCGGGCTTTGCATCACATCACCACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 90 bp | TTCTCCTGCCAGGACTCACCCTTGTCCTCAATGAGGCAGGCATGCTaGCTATACACACTCCAGTCAAAGGCTCCTGGCTCCTCTCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FSCQDSPLSSMRQAC*LYTLQSKAPGSSRS Trigger: GCTGCGAGAGGAGCCAGGAGCCTTTGACTGGAGTGTGTATAGTCAGCATGCCTGCCTCATTGAGGACAAGGGTGAGTCCTGGCAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 90 bp | TCTGTCATGGTGATGTCCTCAAAGTGGGCACAGGCACTGAGCAGCTaGTATATGGTGGGGCCGGAGCCAATATCAATGAGAACCCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SVMVMSSKWAQALSS*YMVGPEPISMRTRP Trigger: GGGACGGGTTCTCATTGATATTGGCTCCGGCCCCACCATATATCAGCTGCTCAGTGCCTGTGCCCACTTTGAGGACATCACCATGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 90 bp | GAAGCTGGCGTTCTTTCTCCTGCCAGGACTCACCCTTGTCCTCAATaGGGCAGGCATGCTGACTATACACACTCCAGTCAAAGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EAGVLSPARTHPCPQ*GRHADYTHSSQRLL Trigger: CAGGAGCCTTTGACTGGAGTGTGTATAGTCAGCATGCCTGCCTCATTGAGGACAAGGGTGAGTCCTGGCAGGAGAAAGAACGCCAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS-3UTR CAA 90 bp | GTCACTTTATTAGGTTCCACTTCAGGTGATAAGGACTTTGGGAGGCACAGGACATGCCAGGACTCACCCTaGTCCTCAATGAGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: VTLLGSTSGDKDFGRHRTCQDSP*SSMRQA Trigger: TGCCTGCCTCATTGAGGACAAGGGTGAGTCCTGGCA...TGTCCTGTGCCTCCCAAAGTCCTTATCACCTGAAGTGGAACCTAATAAAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CCA 72 bp | CAGAGACCAAGGCGTCGGCAGGCAGAGGGACCAGACTaGGAGTTCCCAGGGGCTGGGGCTTGTGCACATCGA | + |
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Preference number: 6 (lower is better) Translates to: QRPRRRQAEGPD*EFPGAGACAHR Trigger: TCGATGTGCACAAGCCCCAGCCCCTGGGAACTCCCAGTCTGGTCCCTCTGCCTGCCGACGCCTTGGTCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CAA 90 bp | TCGGCAGGCAGAGGGACCAGACTGGGAGTTCCCAGGGGCTGGGGCTaGTGCACATCGATAGGCAGGACTCGCTTCACCCTCGCTCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAGRGTRLGVPRGWG*CTSIGRTRFTLARS Trigger: GCTTCGAGCGAGGGTGAAGCGAGTCCTGCCTATCGATGTGCACAAGCCCCAGCCCCTGGGAACTCCCAGTCTGGTCCCTCTGCCTGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | TGGCCAGCGTCGGAGTCAGGGTCCATCTCTGCAGCGTaGTTCGGGTCTGAGCCACTCCCTGTAGCGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: WPASESGSISAA*FGSEPLPVACF Trigger: GAAGCACGCTACAGGGAGTGGCTCAGACCCGAAGCACGCTGCAGAGATGGACCCTGACTCCGACGCTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | GGTTGCTCAGGTCTCCACGAGGAGGCGCGTAGTTGTTaGGGAGATAGGCGCGGGGCTCGAAGCGCTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: GCSGLHEEARSC*GDRRGARSAGK Trigger: CTTACCAGCGCTTCGAGCCCCGCGCCTATCTCCGCAACAACTACGCGCCTCCTCGTGGAGACCTGAGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | TGCAGCGCAGCTTCCAAGGCCCGACGCCATCAGGGTTaGTCAGGTCTCCACGAGGAGGCGCGTAGTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CSAASKARRHQG*SGLHEEARSCC Trigger: GCAACAACTACGCGCCTCCTCGTGGAGACCTGAGCAACCCTGATGGCGTCGGGCCTTGGAAGCTGCGCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | GGGACCAGACTGGGAGTTCCCAGGGGCTGGGGCTTGTaGACATCGATAGGCAGGACTCGCTTCACCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: GTRLGVPRGWGL*TSIGRTRFTLA Trigger: AGCGAGGGTGAAGCGAGTCCTGCCTATCGATGTGCACAAGCCCCAGCCCCTGGGAACTCCCAGTCTGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CAA 72 bp | GAGAACCCGTCCCGACACCTCACCGGTAGCAAAGACTaGTGCCATGCAGCGCAGCTTCCAAGGCCCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: ENPSRHLTGSKD*CHAAQLPRPDA Trigger: GGCGTCGGGCCTTGGAAGCTGCGCTGCATGGCACAAGTCTTTGCTACCGGTGAGGTGTCGGGACGGGTTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | AACCCGTCCCGACACCTCACCGGTAGCAAAGACTTGTaGCATGCAGCGCAGCTTCCAAGGCCCGACGCCATC | + |
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Preference number: 6 (lower is better) Translates to: NPSRHLTGSKDL*HAAQLPRPDAI Trigger: GATGGCGTCGGGCCTTGGAAGCTGCGCTGCATGGCACAAGTCTTTGCTACCGGTGAGGTGTCGGGACGGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CAA 72 bp | AGAGGGACCAGACTGGGAGTTCCCAGGGGCTGGGGCTaGTGCACATCGATAGGCAGGACTCGCTTCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGTRLGVPRGWG*CTSIGRTRFTL Trigger: GAGGGTGAAGCGAGTCCTGCCTATCGATGTGCACAAGCCCCAGCCCCTGGGAACTCCCAGTCTGGTCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS GCA 72 bp | CGCTTCACCCTCGCTCGAAGCTGGCGTTCTTTCTCCTaGCAGGACTCACCCTTGTCCTCAATGAGGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RFTLARSWRSFS*QDSPLSSMRQA Trigger: TGCCTGCCTCATTGAGGACAAGGGTGAGTCCTGGCAGGAGAAAGAACGCCAGCTTCGAGCGAGGGTGAAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 72 bp | CCTCCATCTTCTGGGCCCAGGCAAAGAAGATGCCTTTaGCATCATCTACCCCCGTGCAGAGGTGGGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PPSSGPRQRRCL*HHLPPCRGGQA Trigger: TGCCTGCCCACCTCTGCACGGGGGTAGATGATGTCAAAGGCATCTTCTTTGCCTGGGCCCAGAAGATGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS CAA 90 bp | AATATCAATGAGAACCCGTCCCGACACCTCACCGGTAGCAAAGACTaGTGCCATGCAGCGCAGCTTCCAAGGCCCGACGCCATCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: NINENPSRHLTGSKD*CHAAQLPRPDAIRV Trigger: AACCCTGATGGCGTCGGGCCTTGGAAGCTGCGCTGCATGGCACAAGTCTTTGCTACCGGTGAGGTGTCGGGACGGGTTCTCATTGATATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 72 bp | CAGGACTCACCCTTGTCCTCAATGAGGCAGGCATGCTaGCTATACACACTCCAGTCAAAGGCTCCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QDSPLSSMRQAC*LYTLQSKAPGS Trigger: GGAGCCAGGAGCCTTTGACTGGAGTGTGTATAGTCAGCATGCCTGCCTCATTGAGGACAAGGGTGAGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 72 bp | GTGATGTCCTCAAAGTGGGCACAGGCACTGAGCAGCTaGTATATGGTGGGGCCGGAGCCAATATCAATGAGA | + |
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Preference number: 6 (lower is better) Translates to: VMSSKWAQALSS*YMVGPEPISMR Trigger: TCTCATTGATATTGGCTCCGGCCCCACCATATATCAGCTGCTCAGTGCCTGTGCCCACTTTGAGGACATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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| CDS TCA 72 bp | GTTCTTTCTCCTGCCAGGACTCACCCTTGTCCTCAATaGGGCAGGCATGCTGACTATACACACTCCAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: VLSPARTHPCPQ*GRHADYTHSSQ Trigger: TTGACTGGAGTGTGTATAGTCAGCATGCCTGCCTCATTGAGGACAAGGGTGAGTCCTGGCAGGAGAAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041301.8 |
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