Pregenerated sensors for PNMAL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070802Ensembl transcript IDs: ENSMUST00000094807.6
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGCTCGCGCCATCGCCATCTGTTCATAGAGCTGAGAGGGAAAGCTaGGCACCGGCCATAGCCAGCCAGGGACGCAGCAGCGCACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SLAPSPSVHRAERES*APAIASQGRSSAQS Trigger: GCTTTGTGCGCTGCTGCGTCCCTGGCTGGCTATGGCCGGTGCCCAGCTTTCCCTCTCAGCTCTATGAACAGATGGCGATGGCGCGAGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 90 bp | ACTACAGGAAAACACACAGCTGAGGCGGCTGCTCTCAGGGACAGCTaGGGGCTGGAGCCTGGCCAGCAGCAGTCAGGCTTAGTTAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: TTGKHTAEAAALRDS*GLEPGQQQSGLVRD Trigger: GTCCCTAACTAAGCCTGACTGCTGCTGGCCAGGCTCCAGCCCTCAGCTGTCCCTGAGAGCAGCCGCCTCAGCTGTGTGTTTTCCTGTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 90 bp | ATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTaGCACGTAGCACTACAGGAAAACACACAGCTGAGGCGGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: IYTWKHGAGQPSRGF*HVALQENTQLRRLL Trigger: GAGCAGCCGCCTCAGCTGTGTGTTTTCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 90 bp | ACAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTGGAAGGATaGGCAGGCAGGAATGCCAGGCACCTACACACACTCACGCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TANPNCSARNRCLEG*AGRNARHLHTLTRE Trigger: CTCCCGCGTGAGTGTGTGTAGGTGCCTGGCATTCCTGCCTGCCCATCCTTCCAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 90 bp | GCCCAACACTCTTGCTTCTCCCTAAGGCCCAGTCAGGGCCAGAGGTaGCTCACAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: AQHSCFSLRPSQGQR*LTANPNCSARNRCL Trigger: CAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTGTGAGCCACCTCTGGCCCTGACTGGGCCTTAGGGAGAAGCAAGAGTGTTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 90 bp | CCCTCTGGCCTGCTTCTCCATCTGTCCCCTCATTGCCACTGGTCCTaGGAATCAAGGAGAGGGGCTGCCTCTGAGTACAAAGAGGTACAG | + |
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Preference number: 1 (lower is better) Translates to: PSGLLLHLSPHCHWS*ESRRGAASEYKEVQ Trigger: CTGTACCTCTTTGTACTCAGAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGGCAATGAGGGGACAGATGGAGAAGCAGGCCAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 90 bp | CCTCAGTGTCTTCGGACCCATTTCTCCTCCGCACCCACTGGCCACTaGATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PQCLRTHFSSAPTGH*IRVSGLFFLVISRL Trigger: CAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGTGGCCAGTGGGTGCGGAGGAGAAATGGGTCCGAAGACACTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 90 bp | AGAGACCCCTCAGTGTCTTCGGACCCATTTCTCCTCCGCACCCACTaGCCACTGCATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATC | + |
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Preference number: 1 (lower is better) Translates to: RDPSVSSDPFLLRTH*PLHPSVWSLFPCHI Trigger: GATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGTGGCCAGTGGGTGCGGAGGAGAAATGGGTCCGAAGACACTGAGGGGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 90 bp | CGCACACATTCGCACACGCGGGAACAAGAGGGTTTCAAAGTGCTGTaGAGGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RTHSHTREQEGFKVL*RAKHYLHMETRSWA Trigger: TGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCCCGCGTGTGCGAATGTGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 90 bp | TACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACTaGGGAGCTGGACGGTCTGGGTGTGAGGCTGGTCAGAACTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: YKEVQKPLAVSVCPH*GAGRSGCEAGQNFC Trigger: ACAGAAGTTCTGACCAGCCTCACACCCAGACCGTCCAGCTCCTCAGTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 90 bp | ACTGCATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTaGAGCCATAATGATCGCTCGCGCCATCGCCATCTGTTCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: TASECLVSFSLSYLG*SHNDRSRHRHLFIE Trigger: CTCTATGAACAGATGGCGATGGCGCGAGCGATCATTATGGCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGTCCCCTCATTGCCACTGGTCCTGGGAATCAAGGAGAGGGGCTGCCTCGGGACAGCTGAGGGCTaGAGCCTGGCCAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PSVPSLPLVLGIKERGCLGTAEG*SLASSS Trigger: ACTGCTGCTGGCCAGGCTCCAGCCCTCAGCTGTCCC...GAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGGCAATGAGGGGACAGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR TCA 90 bp | GAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACTACAGGATTAGTTAGGGACCAATaGGGCCAGGGTGGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: ETRSWAAQPGLLARSTTGLVRDQ*GQGGAQ Trigger: CTGTGCCCCACCCTGGCCTCATTGGTCCCTAACTAA...TCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCCGGTGTCTGGAAGGATaGGCAGGCAGGAATGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GQSIIYTWKHGAGQPSRGRCLEG*AGRNAR Trigger: CCTGGCATTCCTGCCTGCCCATCCTTCCAGACACCG...GCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGTCCCCTCATTGCCACTGGTCCTGGGAATCAAGGAGAGGGGCTGCCTCCCAATGAGGCCAGGGTaGGGCACAGCAACTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSVPSLPLVLGIKERGCLPMRPG*GTATAS Trigger: AGAAGCAGTTGCTGTGCCCCACCCTGGCCTCATTGG...GAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGGCAATGAGGGGACAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGCACGTAGCACTACAGGAAAACACACAGCTGAGGCGGCTGCTCTCAGGGATGCACACACACGCGTaGACACATGCGCGCGAACAC | + |
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Preference number: 2 (lower is better) Translates to: FWHVALQENTQLRRLLSGMHTHA*THAREH Trigger: GTGTTCGCGCGCATGTGTGCACGCGTGTGTGTGCAT...CCCTGAGAGCAGCCGCCTCAGCTGTGTGTTTTCCTGTAGTGCTACGTGCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTGGGGCCCTCCCCAGCATGGGCAGGCAGGAATaGCAGGCACCTACACACACT | + |
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Preference number: 2 (lower is better) Translates to: GQVPITMQGKVTCGALPSMGRQE*QAPTHT Trigger: AGTGTGTGTAGGTGCCTGGCATTCCTGCCTGCCCAT...GCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | CGCACACACACGCACACATTCGCACACGCGGGAACAAGAGGGTTTCAAAGTGCTGGAGGGGGCAGGGCTTaGCTAGAAACCCAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: RTHTHTFAHAGTRGFQSAGGGRA*LETQKS Trigger: AGATTTCTGGGTTTCTAGGCAAGCCCTGCCCCCTCC...AGCACTTTGAAACCCTCTTGTTCCCGCGTGTGCGAATGTGTGCGTGTGTGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | CCATCTGTCCCCTCATTGCCACTGGTCCTGGGAATCAAGGAGAGGGGCTGCCTCGGTACAGAAACCCCTTaGAGTTTCTGTATGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PSVPSLPLVLGIKERGCLGTETP*SFCMSP Trigger: TGGGGACATACAGAAACTGCAAGGGGTTTCTGTACC...GAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGGCAATGAGGGGACAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTGGGGCCCTCCCCAGCATCTGGGGTATATACTaGACACAGTGGGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GQVPITMQGKVTCGALPSIWGIY*TQWGEG Trigger: CCCCTCTCCCCACTGTGTGCAGTATATACCCCAGAT...GCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR GCA 90 bp | GGAACAAGAGGGTTTCAAAGTGCTGTGCAGGGCAAAGCATTATCTACACATGGAGCGCGCGAACACGCATaGACACACACGCGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: GTRGFQSAVQGKALSTHGAREHA*THTRAH Trigger: GTGTGCACGCGTGTGTGTGCATGCGTGTTCGCGCGC...TCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTGGGGCCCTCCCCAGCTCAGTCTACATGAAGTaGGGTTTCCTCTCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GQVPITMQGKVTCGALPSSVYMK*GFLSSP Trigger: TGGGCTGGAGAGGAAACCCCACTTCATGTAGACTGA...GCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAGAGGGTTTCAAAGTGCTGTGCAGGGCAAAGCATTATCTACACATGGAGTGGCCAGTGACAGCTaGGGAGTCACAGTAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GTRGFQSAVQGKALSTHGVASDS*GVTVGG Trigger: CCCTCCTACTGTGACTCCCCAGCTGTCACTGGCCAC...TCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGAATCAAGGAGAGGGGCTGCCTCTGAGTACAAAGAGGTACAGAAACCCCCCCTTTAAGGAGATCTaGGGTATATACTGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: PGNQGEGLPLSTKRYRNPPFKEI*GIYCTQ Trigger: CTGTGTGCAGTATATACCCCAGATCTCCTTAAAGGG...GGGGTTTCTGTACCTCTTTGTACTCAGAGGCAGCCCCTCTCCTTGATTCCCAGG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTCCAGTTCTCAGCCCTCACAAACTTTCATTTATGGAATACTTTCCCCTCCAGAAACCGGTGTCTaGAAGGATGGGCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSSSSQPSQTFIYGILSPPETGV*KDGQAG Trigger: TCCTGCCTGCCCATCCTTCCAGACACCGGTTTCTGG...AGGGGAAAGTATTCCATAAATGAAAGTTTGTGAGGGCTGAGAACTGGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTCATTGTTTCATTTGAGGATCCCAGATCACACAGCACACAAGGACAGGGAGAGGGGCTGCCTCTaGGTACAAAGAGGTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: DASLFHLRIPDHTAHKDRERGCL*VQRGTE Trigger: TTCTGTACCTCTTTGTACTCAGAGGCAGCCCCTCTC...CCTGTCCTTGTGTGCTGTGTGATCTGGGATCCTCAAATGAAACAATGAAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CAA 90 bp | ACCCAGAAATCTGGATTTCACCTAAGTTTTCCAAAGCAGAACATTTaGGCAGGGTATATTACCAATTCAACCCGTGGACAAGGGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TQKSGFHLSFPKQNI*AGYITNSTRGQGLG Trigger: CCCTAGCCCTTGTCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACTTAGGTGAAATCCAGATTTCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACAGAAACCCAGAAATCTaGATTTCACCTAAGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASEYKEVQKPLAVSVCPHRNPEI*ISPKFS Trigger: GGAAAACTTAGGTGAAATCCAGATTTCTGGGTTTCT...GTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACCAAAGCAGAACATTTTaGCAGGGTATATTACCAATT | + |
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Preference number: 2 (lower is better) Translates to: ASEYKEVQKPLAVSVCPHQSRTF*QGILPI Trigger: AATTGGTAATATACCCTGCCAAAATGTTCTGCTTTG...GTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | CCATCGCCATCTGTTCATAGAGCTGAGAGGGAAAGCTaGGCACCGGCCATAGCCAGCCAGGGACGCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PSPSVHRAERES*APAIASQGRSS Trigger: GCTGCTGCGTCCCTGGCTGGCTATGGCCGGTGCCCAGCTTTCCCTCTCAGCTCTATGAACAGATGGCGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | ATAGCCAGCCAGGGACGCAGCAGCGCACAAAGCAAATaGACACGGTTAAGCGAGAGGGGGCTGCAGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: IASQGRSSAQSK*TRLSERGLQGG Trigger: TCCTCCCTGCAGCCCCCTCTCGCTTAACCGTGTGCATTTGCTTTGTGCGCTGCTGCGTCCCTGGCTGGCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | TGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTaGCACGTAGCACTACAGGAAAACACACAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: WKHGAGQPSRGF*HVALQENTQLR Trigger: CCTCAGCTGTGTGTTTTCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | CCCAACTGTTCGGCCAGAAACCGGTGTCTGGAAGGATaGGCAGGCAGGAATGCCAGGCACCTACACACACTC | + |
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Preference number: 3 (lower is better) Translates to: PNCSARNRCLEG*AGRNARHLHTL Trigger: GAGTGTGTGTAGGTGCCTGGCATTCCTGCCTGCCCATCCTTCCAGACACCGGTTTCTGGCCGAACAGTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 72 bp | CCTGGCCAGCAGCAGTCAGGCTTAGTTAGGGACCAATaGGGCCAGGGTGGGGCACAGCAACTGCTTCTTACA | + |
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Preference number: 3 (lower is better) Translates to: PGQQQSGLVRDQ*GQGGAQQLLLT Trigger: TGTAAGAAGCAGTTGCTGTGCCCCACCCTGGCCTCATTGGTCCCTAACTAAGCCTGACTGCTGCTGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | CAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTaGAAGGATGGGCAGGCAGGAATGCCAGGCACCTAC | + |
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Preference number: 3 (lower is better) Translates to: QQIPTVRPETGV*KDGQAGMPGTY Trigger: GTAGGTGCCTGGCATTCCTGCCTGCCCATCCTTCCAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | AGGGCAAAGCATTATCTACACATGGAAACACGGAGCTaGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACT | + |
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Preference number: 3 (lower is better) Translates to: RAKHYLHMETRS*AAQPGLLARST Trigger: AGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 72 bp | GTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACTaGGGAGCTGGACGGTCTGGGTGTGAGGCTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VQKPLAVSVCPH*GAGRSGCEAGQ Trigger: CTGACCAGCCTCACACCCAGACCGTCCAGCTCCTCAGTGGGGACATACAGAAACTGCAAGGGGTTTCTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | TCAAAGTGCTGTGCAGGGCAAAGCATTATCTACACATaGAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SKCCAGQSIIYT*KHGAGQPSRGF Trigger: GAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CAA 90 bp | GGACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTGGGGCCCTCCCCAGCCCTGGGGATAGAAAGTaGAACACACGCACACACACG | + |
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Preference number: 3 (lower is better) Translates to: GQVPITMQGKVTCGALPSPGDRK*NTRTHT Trigger: CGTGTGTGTGCGTGTGTTCAACTTTCTATCCCCAGG...GCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 72 bp | CCACTGGTCCTGGGAATCAAGGAGAGGGGCTGCCTCTaGGTACAAAGAGGTACAGAAACCCCTTGCAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: PLVLGIKERGCL*VQRGTETPCSF Trigger: GAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | CTTCGGACCCATTTCTCCTCCGCACCCACTGGCCACTaGATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATA | + |
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Preference number: 3 (lower is better) Translates to: LRTHFSSAPTGH*IRVSGLFFLVI Trigger: TATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGTGGCCAGTGGGTGCGGAGGAGAAATGGGTCCGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | GACAGCTGGGGAGTCACAGTAGGAGGGGGCAGGGCTTaGCTAGAAACCCAGAAATCTGGATTTCACCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: DSWGVTVGGGRA*LETQKSGFHLS Trigger: ACTTAGGTGAAATCCAGATTTCTGGGTTTCTAGGCAAGCCCTGCCCCCTCCTACTGTGACTCCCCAGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CCA 72 bp | ACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTaGGGCCCTCCCCAGCCACTAGACCCCAAGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: TGTYNYARQSDM*GPPQPLDPKSI Trigger: GATGGACTTGGGGTCTAGTGGCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | GAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTaGAGCCATAATGATCGCTCGCGCCATCGCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: ECLVSFSLSYLG*SHNDRSRHRHL Trigger: CAGATGGCGATGGCGCGAGCGATCATTATGGCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | TCGCACACGCGGGAACAAGAGGGTTTCAAAGTGCTGTaGAGGGCAAAGCATTATCTACACATGGAAACACGG | + |
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Preference number: 3 (lower is better) Translates to: SHTREQEGFKVL*RAKHYLHMETR Trigger: CCGTGTTTCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCCCGCGTGTGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR GCA 72 bp | CACATTCGCACACGCGGGAACAAGAGGGTTTCAAAGTaGTGTGCAGGGCAAAGCATTATCTACACATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: HIRTRGNKRVSK*CAGQSIIYTWK Trigger: TTTCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCCCGCGTGTGCGAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR TCA 72 bp | GGGCACAGCAACTGCTTCTTACATGATAGGGACACTTaGCCCTTTAAGGAGATCTGGGGTATATACTGCACA | + |
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Preference number: 3 (lower is better) Translates to: GHSNCFLHDRDT*PFKEIWGIYCT Trigger: TGTGCAGTATATACCCCAGATCTCCTTAAAGGGTCAAGTGTCCCTATCATGTAAGAAGCAGTTGCTGTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACCCAAAGCAGAACATTTaGGCAGGGTATATTACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASEYKEVQKPLAVSVCPHPKQNI*AGYITN Trigger: ATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGG...GTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR-3UTR CAA 90 bp | AGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACCAATTCAACCCGTGGACTGGTCTCTTTTTCCTaGTCATATCTAGGCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SFPKQNILAGYITNSTRGLVSFS*SYLGCS Trigger: GCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAG...TCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTTGCGTGCCCGGGATaGGGTGGAGACCGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSIIYTWKHGAGQPSRGFACPG*GGDRGG Trigger: GCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAA...GCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | AGCCAGCCAGGGACGCAGCAGCGCACAAAGCAAATGCACACGGTTAAGCGAGAGGGTGGCGCCGGCCGGTaGGAGGCCTTTGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTQQRTKQMHTVKREGGAGR*EAFGAC Trigger: ACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCACC...CTCTCGCTTAACCGTGTGCATTTGCTTTGTGCGCTGCTGCGTCCCTGGCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | AGCCAGCCAGGGACGCAGCAGCGCACAAAGCAAATGCACACGGTTAAGCGAGAGCCCGCCTTGGGCCCCTaGGTGCTTTCTTTCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTQQRTKQMHTVKREPALGP*VLSFRG Trigger: CCCGCGGAAAGAAAGCACGCAGGGGCCCAAGGCGGG...CTCTCGCTTAACCGTGTGCATTTGCTTTGTGCGCTGCTGCGTCCCTGGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | GGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCCCGGTGGGAGGCCTTTaGAGCCTGTGCGCGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSIIYTWKHGAGQPSRGPVGGL*SLCALS Trigger: AGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGG...GCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | GAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACTACAGGACCATCTCCTTCTTCCTaGTCACCCCGAAAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSWAAQPGLLARSTTGPSPSS*SPRKAH Trigger: GTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGATGG...TCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | GAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACTACAGGAGCTTCCACCATATCTTaGGCAGCCAAGAGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSWAAQPGLLARSTTGASTIS*AAKSAT Trigger: GGTGGCACTCTTGGCTGCGCAAGATATGGTGGAAGC...TCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | GGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCGTCCACCTGACGACCTaGCTCCTCTACCTTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSIIYTWKHGAGQPSRGVHLTT*LLYLHP Trigger: AGGGTGAAGGTAGAGGAGGCAGGTCGTCAGGTGGAC...GCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR TCA 90 bp | GGGCAAAGCATTATCTACACATGGAAACACGGAGCTGGGCAGCCCAGCCGGGGCCTCTTCTGGCCCTTCTaGGCCGTCAACTTGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQSIIYTWKHGAGQPSRGLFWPF*AVNLWL Trigger: AAGCCACAAGTTGACGGCTCAGAAGGGCCAGAAGAG...GCCCCGGCTGGGCTGCCCAGCTCCGTGTTTCCATGTGTAGATAATGCTTTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR TCA 90 bp | GTCACAGTAGGAGGGGGCAGGGCTTGCCTAGAAACCCAGAAATCTGGATTTCACACCATGGCGTCCACCTaGCGACCTGCCTCCTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: VTVGGGRACLETQKSGFHTMAST*RPASST Trigger: GGTAGAGGAGGCAGGTCGTCAGGTGGACGCCATGGT...GTGAAATCCAGATTTCTGGGTTTCTAGGCAAGCCCTGCCCCCTCCTACTGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR TCA 90 bp | GTCACAGTAGGAGGGGGCAGGGCTTGCCTAGAAACCCAGAAATCTGGATTTCACCAGCGGTCCAGCCTCTaGGGAGACCTAGCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VTVGGGRACLETQKSGFHQRSSL*GDLAQT Trigger: AGTCTGGGCTAGGTCTCCTCAGAGGCTGGACCGCTG...GTGAAATCCAGATTTCTGGGTTTCTAGGCAAGCCCTGCCCCCTCCTACTGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGTGGCTCACAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTGGCACCACTGCCCCACCTaGTGGCTTCTTCTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGGSQQIPTVRPETGVWHHCPT*WLLLLS Trigger: TGAGAGAAGAAGAAGCCAGCAGGTGGGGCAGTGGTG...CCAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTGTGAGCCACCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGAGCCTCAGGAGAGTAAGCTAATGCCAACGCCTTCCCTTCCTTCCCTCCCTAATCCCTTGGCCTaGGCTTGGGCCTCCAATACC | + |
|
Preference number: 4 (lower is better) Translates to: PAEPQESKLMPTPSLPSLPNPLA*AWASNT Trigger: GGTATTGGAGGCCCAAGCCCAGGCCAAGGGATTAGG...GAGGGAAGGAAGGGAAGGCGTTGGCATTAGCTTACTCTCCTGAGGCTCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | CCTGCAGAGCCTCAGGAGAGTAAGCTAATGCCAACGCCTTCCCTTCCTTCCCTCTTAGCATTTCCTCTCTaGCAGAGGGGTCAGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAEPQESKLMPTPSLPSLLAFPL*QRGQRG Trigger: ACCCCGCTGACCCCTCTGCCAGAGAGGAAATGCTAA...GAGGGAAGGAAGGGAAGGCGTTGGCATTAGCTTACTCTCCTGAGGCTCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAATCAAGGAGAGGGGCTGCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGTTGTTCCCCGCATaGTCCTCGGTTGAAACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGNQGEGLPLSTKRYRNPLLFPA*SSVETP Trigger: CGGGGTTTCAACCGAGGACCATGCGGGGAACAACAA...GGGGTTTCTGTACCTCTTTGTACTCAGAGGCAGCCCCTCTCCTTGATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CCA 90 bp | GGAACAAGAGGGTTTCAAAGTGCTGTGCAGGGCAAAGCATTATCTACACATGGACAGCTGGCTGTCCCTTaGCCTCGCCAGCCCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRGFQSAVQGKALSTHGQLAVP*PRQPWH Trigger: GTGCCAGGGCTGGCGAGGCCAAGGGACAGCCAGCTG...TCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR TCA 90 bp | ACTGCATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTGCAGCCATTTTTCTTCTCTGGGGTaGCAGCCCGGCCACGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TASECLVSFSLSYLGCSHFSSLG*QPGHDR Trigger: GCGGTCGTGGCCGGGCTGTCACCCCAGAGAAGAAAA...ATGGCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGTGGCTCACAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTGGTCAGATAAACCACCTTaGCTATGGTCACACTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGGSQQIPTVRPETGVWSDKPP*LWSHFR Trigger: CCGGAAGTGTGACCATAGCCAAGGTGGTTTATCTGA...CCAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTGTGAGCCACCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CAA 72 bp | GGGCTGCCTCTGAGTACAAAGAGGTACAGAAACCCCTaGCAGTTTCTGTATGTCCCCACTGAGGAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLPLSTKRYRNP*QFLYVPTEELD Trigger: GTCCAGCTCCTCAGTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCCAGTTCTCAGCCCTCACAAACTTTCATTTATGGAATACTTTCCCCTTCGATGTCCGCCTGCTaGAGGCGCTCAGGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQPSQTFIYGILSPSMSAC*RRSGMP Trigger: GGGCATCCCTGAGCGCCTGCAGCAGGCGGACATCGA...AGGGGAAAGTATTCCATAAATGAAAGTTTGTGAGGGCTGAGAACTGGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCCAGTTCTCAGCCCTCACAAACTTTCATTTATGGAATACTTTCCCCTACGGCCGCTCCTAGCTaGCCCTTCAGAGGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQPSQTFIYGILSPTAAPS*PFRGAS Trigger: GCTGGCTCCTCTGAAGGGGCAGCTAGGAGCGGCCGT...AGGGGAAAGTATTCCATAAATGAAAGTTTGTGAGGGCTGAGAACTGGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | GTCACAGTAGGAGGGGGCAGGGCTTGCCTAGAAACCCAGAAATCTGGATTTCACATTCCCATCTTCCTCTaGCTTCCTCAGGACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVGGGRACLETQKSGFHIPIFL*LPQDHG Trigger: GCCATGGTCCTGAGGAAGGCAGAGGAAGATGGGAAT...GTGAAATCCAGATTTCTGGGTTTCTAGGCAAGCCCTGCCCCCTCCTACTGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR GCA 90 bp | ACTGCATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTGCAGCCATTCCGAAGCCTGTAGTTaGCCAGGGGCTGCAAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TASECLVSFSLSYLGCSHSEACS*PGAASS Trigger: CGAACTTGCAGCCCCTGGGCAACTACAGGCTTCGGA...ATGGCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | CGCACACACACGCACACATTCGCACACGCGGGAACAAGAGGGTTTCAAAGTGCTCCTGAGACTTCTCTTTaGTTACAGCTCTCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHTFAHAGTRGFQSAPETSL*LQLSQS Trigger: GGACTGTGAGAGCTGTAACCAAAGAGAAGTCTCAGG...AGCACTTTGAAACCCTCTTGTTCCCGCGTGTGCGAATGTGTGCGTGTGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | CCTGCAGAGCCTCAGGAGAGTAAGCTAATGCCAACGCCTTCCCTTCCTTCCCTCAAATTCTACAAGGGCTaGCTGAGACTTCTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAEPQESKLMPTPSLPSLKFYKG*LRLLFG Trigger: ACCAAAGAGAAGTCTCAGGCAGCCCTTGTAGAATTT...GAGGGAAGGAAGGGAAGGCGTTGGCATTAGCTTACTCTCCTGAGGCTCTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR TCA 90 bp | GCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACTCTACAAGGGCTGCCTaGGACTTCTCTTTGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ASEYKEVQKPLAVSVCPHSTRAA*DFSLVT Trigger: TGTAACCAAAGAGAAGTCTCAGGCAGCCCTTGTAGA...GTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACCAATTCAACCCGTGGACCTTCCCTAATCCCTTaGCCTGGGCTTGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPKQNILAGYITNSTRGPSLIP*PGLGPP Trigger: TGGAGGCCCAAGCCCAGGCCAAGGGATTAGGGAAGG...TCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | ACTGCATCCGAGTGTCTGGTCTCTTTTTCCTTGTCATATCTAGGCTGCAGCCATATCACTTCCTTTCCGTaGTCTCCATTTTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TASECLVSFSLSYLGCSHITSFP*SPFSRD Trigger: GTCTCTGGAAAATGGAGAGCACGGAAAGGAAGTGAT...ATGGCTGCAGCCTAGATATGACAAGGAAAAAGAGACCAGACACTCGGATGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR GCA 90 bp | GGAACAAGAGGGTTTCAAAGTGCTGTGCAGGGCAAAGCATTATCTACACATGGACTTAGGGCAGTTCTCTaGCTCAGCCAAGGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRGFQSAVQGKALSTHGLRAVL*LSQGRN Trigger: ATTTCTACCTTGGCTGAGGCAGAGAACTGCCCTAAG...TCCATGTGTAGATAATGCTTTGCCCTGCACAGCACTTTGAAACCCTCTTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACCAATTCAACCCGTGGACACTGCCCCACCTGCTaGCTTCTTCTTCTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPKQNILAGYITNSTRGHCPTC*LLLLSQ Trigger: CTGTGAGAGAAGAAGAAGCCAGCAGGTGGGGCAGTG...TCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR TCA 90 bp | ATCTGGATTTCACCTAAGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACAGGCCCACTTCTTGGTaGGCTCTTTGGCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWISPKFSKAEHFGRVYYRPTSW*ALWQLL Trigger: AAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCT...GTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACTTAGGTGAAATCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| 3UTR CAA 72 bp | TCTGGATTTCACCTAAGTTTTCCAAAGCAGAACATTTaGGCAGGGTATATTACCAATTCAACCCGTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGFHLSFPKQNI*AGYITNSTRGQ Trigger: TTGTCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACTTAGGTGAAATCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | GGTGACAGCCCGGCCACGACCGCGGCCACCCCTGCGGGCTTTGCGTaGCCGGGATGCGGTGGAGACCGCGGTGGCGCCGGCCGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDSPATTAATPAGFA*PGCGGDRGGAGRWE Trigger: CTCCCACCGGCCGGCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTGGCCGCGGTCGTGGCCGGGCTGTCACC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | CCGGCCACGACCGCGGCCACCCCTGCGGGCTTTGCGTGCCCGGGATaGGGTGGAGACCGCGGTGGCGCCGGCCGGTGGGAGGCCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PATTAATPAGFACPG*GGDRGGAGRWEAFG Trigger: TCCAAAGGCCTCCCACCGGCCGGCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTGGCCGCGGTCGTGGCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | CACCCCTGCGGGCTTTGCGTGCCCGGGATGCGGTGGAGACCGCGGTaGCGCCGGCCGGTGGGAGGCCTTTGGAGCCTGTGCGCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPCGLCVPGMRWRPR*RRPVGGLWSLCALS Trigger: AGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | TGGAGACCGCGGTGGCGCCGGCCGGTGGGAGGCCTTTGGAGCCTGTaGGCGCTCTCTTGGCGCGCGGCTTCTTGGACACGCTGTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WRPRWRRPVGGLWSL*ALSWRAASWTRCHQ Trigger: CTGGTGACAGCGTGTCCAAGAAGCCGCGCGCCAAGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCACCGCGGTCTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | TGGCGCCGGCCGGTGGGAGGCCTTTGGAGCCTGTGCGCGCTCTCTTaGCGCGCGGCTTCTTGGACACGCTGTCACCAGGTTCGGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRRPVGGLWSLCALS*RAASWTRCHQVRTL Trigger: AAGAGTCCGAACCTGGTGACAGCGTGTCCAAGAAGCCGCGCGCCAAGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS TCA 90 bp | TCACTCCTGGCTCGCCGCCCTCCCCGGCTCCTCTTCTGGCCCTTCTaGGCCGTCAACTTGTGGCTTCTGGATCGGCGCTTGCCTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLARRPPRLLFWPF*AVNLWLLDRRLPPR Trigger: TCGGGGAGGCAAGCGCCGATCCAGAAGCCACAAGTTGACGGCTCAGAAGGGCCAGAAGAGGAGCCGGGGAGGGCGGCGAGCCAGGAGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS GCA 90 bp | CCCAGGGGCTGCAAGTTCGGACTCAGGGTAGCTTCGATGTCCGCCTaGTGCAGGCGCTCAGGGATGCCCGTGATCAGGAGGGCCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRGCKFGLRVASMSA*CRRSGMPVIRRALC Trigger: GCACAGGGCCCTCCTGATCACGGGCATCCCTGAGCGCCTGCAGCAGGCGGACATCGAAGCTACCCTGAGTCCGAACTTGCAGCCCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS GCA 90 bp | AGGGGCTGCAAGTTCGGACTCAGGGTAGCTTCGATGTCCGCCTGCTaGAGGCGCTCAGGGATGCCCGTGATCAGGAGGGCCCTGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGCKFGLRVASMSAC*RRSGMPVIRRALCT Trigger: GGTGCACAGGGCCCTCCTGATCACGGGCATCCCTGAGCGCCTGCAGCAGGCGGACATCGAAGCTACCCTGAGTCCGAACTTGCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS GCA 90 bp | TGGCTGTCCCTTGGCCTCGCCAGCCCTGGCACGGGCCCCGGCTCCTaGGGATCCCTTCTTCTTCTTGTTGTTGTTCCCCGCATGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLSLGLASPGTGPGS*GSLLLLVVVPRMVL Trigger: GAGGACCATGCGGGGAACAACAACAAGAAGAAGAAGGGATCCGCAGGAGCCGGGGCCCGTGCCAGGGCTGGCGAGGCCAAGGGACAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CAA 90 bp | GAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACTACAGGATCCCTTGGCCTGGGCTaGGGCCTCCAATACCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETRSWAAQPGLLARSTTGSLGLG*GLQYQR Trigger: CCTCTGGTATTGGAGGCCCAAGCCCAGGCCAAGGGA...TCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGGTGGCTCACAGCAAATCCCAACTGTTCGGCCAGAAACCGGTGTCTGGGCCGGTGGGAGGCCTTaGGAGCCTGTGCGCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGGSQQIPTVRPETGVWAGGRP*EPVRAL Trigger: GAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGC...CCAGACACCGGTTTCTGGCCGAACAGTTGGGATTTGCTGTGAGCCACCTCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS-3UTR CAA 90 bp | GAAACACGGAGCTGGGCAGCCCAGCCGGGGCTTCTGGCACGTAGCACTACAGGACTCTTTGGCAGCTGCTaGGAGCGTGGCATACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ETRSWAAQPGLLARSTTGLFGSC*ERGIQG Trigger: GCCCTGTATGCCACGCTCCAAGCAGCTGCCAAAGAG...TCCTGTAGTGCTACGTGCCAGAAGCCCCGGCTGGGCTGCCCAGCTCCGTGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS CCA 90 bp | ATATCTTGCGCAGCCAAGAGTGCCACCAGCTCCAATAGGCCACCCTaGTGGCCCTCAGCGGTCCAGCCTCTGAGGAGACCTAGCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISCAAKSATSSNRPP*WPSAVQPLRRPSPD Trigger: GTCTGGGCTAGGTCTCCTCAGAGGCTGGACCGCTGAGGGCCACCAGGGTGGCCTATTGGAGCTGGTGGCACTCTTGGCTGCGCAAGATAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS TCA 90 bp | AGATTCCCATCTTCCTCTGCCTTCCTCAGGACCATGGCGTCCACCTaGCGACCTGCCTCCTCTACCTTCACCCTGGGCCCAGAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFPSSSAFLRTMAST*RPASSTFTLGPEVS Trigger: GGACACCTCTGGGCCCAGGGTGAAGGTAGAGGAGGCAGGTCGTCAGGTGGACGCCATGGTCCTGAGGAAGGCAGAGGAAGATGGGAATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | GCCTGCTGCAGGCGCTCAGGGATGCCCGTGATCAGGAGGGCCCTGTaGACCTCCACTTCCAGCTCCTTACACCAATCTTGCAGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ACCRRSGMPVIRRAL*TSTSSSLHQSCRRF Trigger: GAACCTTCTGCAAGATTGGTGTAAGGAGCTGGAAGTGGAGGTGCACAGGGCCCTCCTGATCACGGGCATCCCTGAGCGCCTGCAGCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS TCA 90 bp | GGCCATCTCCTTCTTCCTGGTCACCCCGAAAGGCCCACTTCTTGGTaGGCTCTTTGGCAGCTGCTTGGAGCGTGGCATACAGGGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GHLLLPGHPERPTSW*ALWQLLGAWHTGPS Trigger: AGAGGGCCCTGTATGCCACGCTCCAAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | ATCTTCCTCTGCCTTCCTCAGGACCATGGCGTCCACCTGACGACCTaGCTCCTCTACCTTCACCCTGGGCCCAGAGGTGTCCTTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IFLCLPQDHGVHLTT*LLYLHPGPRGVLSH Trigger: ATGGCTAAGGACACCTCTGGGCCCAGGGTGAAGGTAGAGGAGGCAGGTCGTCAGGTGGACGCCATGGTCCTGAGGAAGGCAGAGGAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | TGGGAGGCCAGGAAAGCCAGGACCTCAGATAAACCACCTTGGCTATaGTCACACTTCCGGCCACCACTTCCACCACTGCCCCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WEARKARTSDKPPWL*SHFRPPLPPLPHLL Trigger: CAGCAGGTGGGGCAGTGGTGGAAGTGGTGGCCGGAAGTGTGACCATAGCCAAGGTGGTTTATCTGAGGTCCTGGCTTTCCTGGCCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | CCCCACCTGCTGGCTTCTTCTTCTCTCACAGCTTCCACCATATCTTaGGCAGCCAAGAGTGCCACCAGCTCCAATAGGCCACCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLLASSSLTASTIS*AAKSATSSNRPPWW Trigger: CCACCAGGGTGGCCTATTGGAGCTGGTGGCACTCTTGGCTGCGCAAGATATGGTGGAAGCTGTGAGAGAAGAAGAAGCCAGCAGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | CCCCTTCAGAGGAGCCAGCCTTCTTGGCCTCCTTCCCTAATCCCTTaGCCTGGGCTTGGGCCTCCAATACCAGAGGGATGGCTATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLQRSQPSWPPSLIP*PGLGPPIPEGWLFL Trigger: GAGAAATAGCCATCCCTCTGGTATTGGAGGCCCAAGCCCAGGCCAAGGGATTAGGGAAGGAGGCCAAGAAGGCTGGCTCCTCTGAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | TCACCCCGAAAGGCCCACTTCTTGGTGAGCTCTTTGGCAGCTGCTTaGAGCGTGGCATACAGGGCCCTCTGGTCTTCATCTACGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRKAHFLVSSLAAA*SVAYRALWSSSTLR Trigger: CCTGAGCGTAGATGAAGACCAGAGGGCCCTGTATGCCACGCTCCAAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CAA 90 bp | GGACAGGTACCTATAACTATGCAAGGCAAAGTGACATGTGGGGCCCTCCCCAGCTTGGCGCGCGGCTTCTaGGACACGCTGTCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQVPITMQGKVTCGALPSLARGF*DTLSPG Trigger: ACCTGGTGACAGCGTGTCCAAGAAGCCGCGCGCCAA...GCTGGGGAGGGCCCCACATGTCACTTTGCCTTGCATAGTTATAGGTACCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | TACATTCCAGAAGATTCCCATCTTCCTCTGCCTTCCTCAGGACCATaGCGTCCACCTGACGACCTGCCTCCTCTACCTTCACCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YIPEDSHLPLPSSGP*RPPDDLPPLPSPWA Trigger: GGCCCAGGGTGAAGGTAGAGGAGGCAGGTCGTCAGGTGGACGCCATGGTCCTGAGGAAGGCAGAGGAAGATGGGAATCTTCTGGAATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | TATGGTCACACTTCCGGCCACCACTTCCACCACTGCCCCACCTGCTaGCTTCTTCTTCTCTCACAGCTTCCACCATATCTTGCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YGHTSGHHFHHCPTC*LLLLSQLPPYLAQP Trigger: TGGCTGCGCAAGATATGGTGGAAGCTGTGAGAGAAGAAGAAGCCAGCAGGTGGGGCAGTGGTGGAAGTGGTGGCCGGAAGTGTGACCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CAA 90 bp | CCATCTGTCCCCTCATTGCCACTGGTCCTGGGAATCAAGGAGAGGGGCTGCCTCGATCCCTTCTTCTTCTaGTTGTTGTTCCCCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSVPSLPLVLGIKERGCLDPFFF*LLFPAW Trigger: CCATGCGGGGAACAACAACAAGAAGAAGAAGGGATC...GAGGCAGCCCCTCTCCTTGATTCCCAGGACCAGTGGCAATGAGGGGACAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | ACAGTGACAAGTGCCAAGAATTCTCGGGGGCCATCTCCTTCTTCCTaGTCACCCCGAAAGGCCCACTTCTTGGTGAGCTCTTTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVTSAKNSRGPSPSS*SPRKAHFLVSSLAA Trigger: AGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGATGGCCCCCGAGAATTCTTGGCACTTGTCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 90 bp | CTCAGCCAAGGTAGAAATACATTCCAGAAGATTCCCATCTTCCTCTaGCTTCCTCAGGACCATGGCGTCCACCTGACGACCTGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSQGRNTFQKIPIFL*LPQDHGVHLTTCLL Trigger: GAGGAGGCAGGTCGTCAGGTGGACGCCATGGTCCTGAGGAAGGCAGAGGAAGATGGGAATCTTCTGGAATGTATTTCTACCTTGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | CGAAGTCTGCCCCAAATTCTACAAGGGCTGCCTGAGACTTCTCTTTaGTTACAGCTCTCACAGTCCGAAGCCTGTAGTTGCCCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSLPQILQGLPETSL*LQLSQSEACSCPGA Trigger: AGCCCCTGGGCAACTACAGGCTTCGGACTGTGAGAGCTGTAACCAAAGAGAAGTCTCAGGCAGCCCTTGTAGAATTTGGGGCAGACTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CAA 90 bp | GCCTCTGAGTACAAAGAGGTACAGAAACCCCTTGCAGTTTCTGTATGTCCCCACTTTCCGCGGGTAGACTaGGGAACAGCAGCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASEYKEVQKPLAVSVCPHFPRVD*GTAAGC Trigger: ACAGCCAGCTGCTGTTCCCAAGTCTACCCGCGGAAA...GTGGGGACATACAGAAACTGCAAGGGGTTTCTGTACCTCTTTGTACTCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 90 bp | GTGTCTGAATCCTCGTCCGATTCCTCGTTGGATTCTAGATTCTCCTaGGAGGCCAGGAAAGCCAGGACCTCAGATAAACCACCTTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSESSSDSSLDSRFS*EARKARTSDKPPWL Trigger: TAGCCAAGGTGGTTTATCTGAGGTCCTGGCTTTCCTGGCCTCCCAGGAGAATCTAGAATCCAACGAGGAATCGGACGAGGATTCAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS GCA 90 bp | AGGTATGGCAGAGTGATCGAAGTCTGCCCCAAATTCTACAAGGGCTaGCTGAGACTTCTCTTTGGTTACAGCTCTCACAGTCCGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RYGRVIEVCPKFYKG*LRLLFGYSSHSPKP Trigger: AGGCTTCGGACTGTGAGAGCTGTAACCAAAGAGAAGTCTCAGGCAGCCCTTGTAGAATTTGGGGCAGACTTCGATCACTCTGCCATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CAA 90 bp | AGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACCAATTCAACCCGTGGACGAAAGGCCCACTTCTaGGTGAGCTCTTTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPKQNILAGYITNSTRGRKAHF*VSSLAA Trigger: AGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCG...TCCACGGGTTGAATTGGTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS-3UTR CAA 90 bp | ATCTGGATTTCACCTAAGTTTTCCAAAGCAGAACATTTTGGCAGGGTATATTACCCCTTCTTCTTCTTGTaGTTGTTCCCCGCATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IWISPKFSKAEHFGRVYYPFFFL*LFPAWS Trigger: GGACCATGCGGGGAACAACAACAAGAAGAAGAAGGG...GTAATATACCCTGCCAAAATGTTCTGCTTTGGAAAACTTAGGTGAAATCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | ACCGCGGCCACCCCTGCGGGCTTTGCGTGCCCGGGATaGGGTGGAGACCGCGGTGGCGCCGGCCGGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAATPAGFACPG*GGDRGGAGRWE Trigger: CTCCCACCGGCCGGCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTGGCCGCGGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | CAGCCCGGCCACGACCGCGGCCACCCCTGCGGGCTTTaGGTGCCCGGGATGCGGTGGAGACCGCGGTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QPGHDRGHPCGL*VPGMRWRPRWR Trigger: GCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTGGCCGCGGTCGTGGCCGGGCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | TCTGGGGTGACAGCCCGGCCACGACCGCGGCCACCCCTGCGGGCTTaGCGTGCCCGGGATGCGGTGGAGACCGCGGTGGCGCCGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGVTARPRPRPPLRA*RARDAVETAVAPAG Trigger: ACCGGCCGGCGCCACCGCGGTCTCCACCGCATCCCGGGCACGCAAAGCCCGCAGGGGTGGCCGCGGTCGTGGCCGGGCTGTCACCCCAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 72 bp | GTGGAGACCGCGGTGGCGCCGGCCGGTGGGAGGCCTTaGGAGCCTGTGCGCGCTCTCTTGGCGCGCGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VETAVAPAGGRP*EPVRALLARGF Trigger: GAAGCCGCGCGCCAAGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCACCGCGGTCTCCAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | CGGTGGCGCCGGCCGGTGGGAGGCCTTTGGAGCCTGTaGGCGCTCTCTTGGCGCGCGGCTTCTTGGACACGC | + |
|
Preference number: 6 (lower is better) Translates to: RWRRPVGGLWSL*ALSWRAASWTR Trigger: GCGTGTCCAAGAAGCCGCGCGCCAAGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | GTGGCGCCGGCCGGTGGGAGGCCTTTGGAGCCTGTGCGCGCTCTCTaGGCGCGCGGCTTCTTGGACACGCTGTCACCAGGTTCGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAPAGGRPLEPVRAL*ARGFLDTLSPGSDS Trigger: AGAGTCCGAACCTGGTGACAGCGTGTCCAAGAAGCCGCGCGCCAAGAGAGCGCGCACAGGCTCCAAAGGCCTCCCACCGGCCGGCGCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | GCTTTCTTTCCGCGGGTAGACTTGGGAACAGCAGCTGGCTGTCCCTaGGCCTCGCCAGCCCTGGCACGGGCCCCGGCTCCTGCGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: AFFPRVDLGTAAGCP*ASPALARAPAPADP Trigger: GGGATCCGCAGGAGCCGGGGCCCGTGCCAGGGCTGGCGAGGCCAAGGGACAGCCAGCTGCTGTTCCCAAGTCTACCCGCGGAAAGAAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | GGCGCCCGCCTTGGGCCCCTGCGTGCTTTCTTTCCGCGGGTAGACTaGGGAACAGCAGCTGGCTGTCCCTTGGCCTCGCCAGCCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GARLGPLRAFFPRVD*GTAAGCPLASPALA Trigger: TGCCAGGGCTGGCGAGGCCAAGGGACAGCCAGCTGCTGTTCCCAAGTCTACCCGCGGAAAGAAAGCACGCAGGGGCCCAAGGCGGGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | CTTGCCTCCCCGACGGCCCCGACGGCCGCTCCTAGCTaGCCCTTCAGAGGAGCCAGCCTTCTTGGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LASPTAPTAAPS*PFRGASLLGLL Trigger: AAGGAGGCCAAGAAGGCTGGCTCCTCTGAAGGGGCAGCTAGGAGCGGCCGTCGGGGCCGTCGGGGAGGCAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS TCA 72 bp | CGATGTCCGCCTGCTGCAGGCGCTCAGGGATGCCCGTaGTCAGGAGGGCCCTGTGCACCTCCACTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RCPPAAGAQGCP*SGGPCAPPLPA Trigger: AGCTGGAAGTGGAGGTGCACAGGGCCCTCCTGATCACGGGCATCCCTGAGCGCCTGCAGCAGGCGGACATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | TCTTCTGGCCCTTCTGAGCCGTCAACTTGTGGCTTCTaGATCGGCGCTTGCCTCCCCGACGGCCCCGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGPSEPSTCGF*IGACLPDGPDG Trigger: GCCGTCGGGGCCGTCGGGGAGGCAAGCGCCGATCCAGAAGCCACAAGTTGACGGCTCAGAAGGGCCAGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | CCCCGACGGCCGCTCCTAGCTGCCCCTTCAGAGGAGCCAGCCTTCTaGGCCTCCTTCCCTAATCCCTTGGCCTGGGCTTGGGCCTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PRRPLLAAPSEEPAF*ASFPNPLAWAWASN Trigger: ATTGGAGGCCCAAGCCCAGGCCAAGGGATTAGGGAAGGAGGCCAAGAAGGCTGGCTCCTCTGAAGGGGCAGCTAGGAGCGGCCGTCGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | CCAGGCTGTCATCAGAAGAGTCTTCCGACTCACTCCTaGCTCGCCGCCCTCCCCGGCTCCTCTTCTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGCHQKSLPTHS*LAALPGSSSGP Trigger: AGGGCCAGAAGAGGAGCCGGGGAGGGCGGCGAGCCAGGAGTGAGTCGGAAGACTCTTCTGATGACAGCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | GCCAAGAGTGCCACCAGCTCCAATAGGCCACCCTGGTaGCCCTCAGCGGTCCAGCCTCTGAGGAGACCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AKSATSSNRPPW*PSAVQPLRRPS Trigger: GCTAGGTCTCCTCAGAGGCTGGACCGCTGAGGGCCACCAGGGTGGCCTATTGGAGCTGGTGGCACTCTTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | GCAGCCAAGAGTGCCACCAGCTCCAATAGGCCACCCTaGTGGCCCTCAGCGGTCCAGCCTCTGAGGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: AAKSATSSNRPP*WPSAVQPLRRP Trigger: AGGTCTCCTCAGAGGCTGGACCGCTGAGGGCCACCAGGGTGGCCTATTGGAGCTGGTGGCACTCTTGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | TGCTTTCTTTCCGCGGGTAGACTTGGGAACAGCAGCTaGCTGTCCCTTGGCCTCGCCAGCCCTGGCACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CFLSAGRLGNSS*LSLGLASPGTG Trigger: GCCCGTGCCAGGGCTGGCGAGGCCAAGGGACAGCCAGCTGCTGTTCCCAAGTCTACCCGCGGAAAGAAAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | CGGGGGCCATCTCCTTCTTCCTGGTCACCCCGAAAGGCCCACTTCTaGGTGAGCTCTTTGGCAGCTGCTTGGAGCGTGGCATACAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGPSPSSWSPRKAHF*VSSLAAAWSVAYRA Trigger: GGCCCTGTATGCCACGCTCCAAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGATGGCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | AGGAGCCAGCCTTCTTGGCCTCCTTCCCTAATCCCTTaGCCTGGGCTTGGGCCTCCAATACCAGAGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQPSWPPSLIP*PGLGPPIPEGW Trigger: CCATCCCTCTGGTATTGGAGGCCCAAGCCCAGGCCAAGGGATTAGGGAAGGAGGCCAAGAAGGCTGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 72 bp | GCACGGGCCCCGGCTCCTGCGGATCCCTTCTTCTTCTaGTTGTTGTTCCCCGCATGGTCCTCGGTTGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: ARAPAPADPFFF*LLFPAWSSVET Trigger: GGTTTCAACCGAGGACCATGCGGGGAACAACAACAAGAAGAAGAAGGGATCCGCAGGAGCCGGGGCCCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | GGCTATGGTCACACTTCCGGCCACCACTTCCACCACTaGCCCACCTGCTGGCTTCTTCTTCTCTCACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GYGHTSGHHFHH*PTCWLLLLSQL Trigger: AAGCTGTGAGAGAAGAAGAAGCCAGCAGGTGGGGCAGTGGTGGAAGTGGTGGCCGGAAGTGTGACCATAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 72 bp | TCTCCTTCTTCCTGGTCACCCCGAAAGGCCCACTTCTaGGTGAGCTCTTTGGCAGCTGCTTGGAGCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSWSPRKAHF*VSSLAAAWSVA Trigger: TGCCACGCTCCAAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | AGTGCCAAGAATTCTCGGGGGCCATCTCCTTCTTCCTaGTCACCCCGAAAGGCCCACTTCTTGGTGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SAKNSRGPSPSS*SPRKAHFLVSS Trigger: AGAGCTCACCAAGAAGTGGGCCTTTCGGGGTGACCAGGAAGAAGGAGATGGCCCCCGAGAATTCTTGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | GAAGATTCCCATCTTCCTCTGCCTTCCTCAGGACCATaGCGTCCACCTGACGACCTGCCTCCTCTACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EDSHLPLPSSGP*RPPDDLPPLPS Trigger: TGAAGGTAGAGGAGGCAGGTCGTCAGGTGGACGCCATGGTCCTGAGGAAGGCAGAGGAAGATGGGAATCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 72 bp | AAAGGCCCACTTCTTGGTGAGCTCTTTGGCAGCTGCTaGGAGCGTGGCATACAGGGCCCTCTGGTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KGPLLGELFGSC*ERGIQGPLVFI Trigger: GATGAAGACCAGAGGGCCCTGTATGCCACGCTCCAAGCAGCTGCCAAAGAGCTCACCAAGAAGTGGGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | CTGGCTTCTTCTTCTCTCACAGCTTCCACCATATCTTaGGCAGCCAAGAGTGCCACCAGCTCCAATAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LASSSLTASTIS*AAKSATSSNRP Trigger: TGGCCTATTGGAGCTGGTGGCACTCTTGGCTGCGCAAGATATGGTGGAAGCTGTGAGAGAAGAAGAAGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS GCA 72 bp | GCCACAAACTCGGGGCTATCCATCACTTCCTTTCCGTaGTCTCCATTTTCCAGAGACTCGCTGTCGGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: ATNSGLSITSFP*SPFSRDSLSES Trigger: TGATTCCGACAGCGAGTCTCTGGAAAATGGAGAGCACGGAAAGGAAGTGATGGATAGCCCCGAGTTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS CCA 72 bp | TCCTCGTCCGATTCCTCGTTGGATTCTAGATTCTCCTaGGAGGCCAGGAAAGCCAGGACCTCAGATAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSDSSLDSRFS*EARKARTSDKP Trigger: TGGTTTATCTGAGGTCCTGGCTTTCCTGGCCTCCCAGGAGAATCTAGAATCCAACGAGGAATCGGACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CCA 72 bp | CTGACTCTGTGTCTGAATCCTCGTCCGATTCCTCGTTaGATTCTAGATTCTCCTGGGAGGCCAGGAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTLCLNPRPIPR*ILDSPGRPGKP Trigger: TGGCTTTCCTGGCCTCCCAGGAGAATCTAGAATCCAACGAGGAATCGGACGAGGATTCAGACACAGAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS CAA 72 bp | TCTGACTCTGTGTCTGAATCCTCGTCCGATTCCTCGTaGGATTCTAGATTCTCCTGGGAGGCCAGGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SDSVSESSSDSS*DSRFSWEARKA Trigger: GGCTTTCCTGGCCTCCCAGGAGAATCTAGAATCCAACGAGGAATCGGACGAGGATTCAGACACAGAGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
||
| CDS TCA 72 bp | CCATTCTCTCCCCTAATGTGGATAGGTATGGCAGAGTaGTCGAAGTCTGCCCCAAATTCTACAAGGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PFSPLMWIGMAE*SKSAPNSTRAA Trigger: GGCAGCCCTTGTAGAATTTGGGGCAGACTTCGATCACTCTGCCATACCTATCCACATTAGGGGAGAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 90 bp | GACTCTGTCCCAGGAAGGTCTTTCTCTATCTCTTCCTTCTTAGCTTaGTCGGTGACAGTGACAAGTGCCAAGAATTCTCGGGGGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: DSVPGRSFSISSFLA*SVTVTSAKNSRGPS Trigger: AGATGGCCCCCGAGAATTCTTGGCACTTGTCACTGTCACCGACAAAGCTAAGAAGGAAGAGATAGAGAAAGACCTTCCTGGGACAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS GCA 72 bp | AGAGTGATCGAAGTCTGCCCCAAATTCTACAAGGGCTaGCTGAGACTTCTCTTTGGTTACAGCTCTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: RVIEVCPKFYKG*LRLLFGYSSHS Trigger: ACTGTGAGAGCTGTAACCAAAGAGAAGTCTCAGGCAGCCCTTGTAGAATTTGGGGCAGACTTCGATCACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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| CDS CAA 72 bp | CCAGGAAGGTCTTTCTCTATCTCTTCCTTCTTAGCTTaGTCGGTGACAGTGACAAGTGCCAAGAATTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PGRSFSISSFLA*SVTVTSAKNSR Trigger: CCGAGAATTCTTGGCACTTGTCACTGTCACCGACAAAGCTAAGAAGGAAGAGATAGAGAAAGACCTTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094807.6 |
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