Pregenerated sensors for PNMAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041141Ensembl transcript IDs: ENSMUST00000038163.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGACTTACCAAATTCGTACAGTGCAAGGAACAAAATGTCTACATaGCCTTCTGGGCCGCAGGCCGAGCAGGCAAGCTATGCCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SDLPNSYSARNKMST*PSGPQAEQASYASR Trigger: TCTGGAGGCATAGCTTGCCTGCTCGGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTTCCTTGCACTGTACGAATTTGGTAAGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR GCA 90 bp | ACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATaGATAAACTCACTCAGGATATTGTTACAGGACATGCAGGGGATC | + |
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Preference number: 1 (lower is better) Translates to: TLMSITAEQEMETQR*INSLRILLQDMQGI Trigger: GATCCCCTGCATGTCCTGTAACAATATCCTGAGTGAGTTTATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 90 bp | CCAAAGCTATTTATTACCTTGTCCACCTTTGAGGCTGTGCAGAAATaGAAAGTGGCTCCAACTCAGGAAAAGACACAGAGGGAATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PKLFITLSTFEAVQK*KVAPTQEKTQRESP Trigger: GGGAGATTCCCTCTGTGTCTTTTCCTGAGTTGGAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGGACAAGGTAATAAATAGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 90 bp | TTTCCCAGAACTAACTCTCAGGATCTCAATTTCCATTTAGGCTGCTaGAGGGTGAACACTGAAGAATCCACACAGCAAGCTTCAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FPRTNSQDLNFHLGC*RVNTEESTQQASKS Trigger: GCTCTTTGAAGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGATCCTGAGAGTTAGTTCTGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 90 bp | GTGAACACTGAAGAATCCACACAGCAAGCTTCAAAGAGCAAGGTCTaGCTTACCAAATTCGTACAGTGCAAGGAACAAAATGTCTACATG | + |
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Preference number: 1 (lower is better) Translates to: VNTEESTQQASKSKV*LTKFVQCKEQNVYM Trigger: CATGTAGACATTTTGTTCCTTGCACTGTACGAATTTGGTAAGTCAGACCTTGCTCTTTGAAGCTTGCTGTGTGGATTCTTCAGTGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGCAGGGGCTCTATCACTaGACCCTGCCTGCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGQGLYH*TLPAAP Trigger: AGGGGCTGCAGGCAGGGTTCAGTGATAGAGCCCCTG...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGAGTTCTCTTCCAACTTaGGTCTTCTTCCTTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGSSLPT*VFFLDA Trigger: AGCATCAAGGAAGAAGACTCAAGTTGGAAGAGAACT...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGCCCACACAGGCACACTaGGCCCCCAACGGTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLPTQAH*APNGSQ Trigger: CTGTGAACCGTTGGGGGCCCAGTGTGCCTGTGTGGG...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CAA 90 bp | CCCAGAAGTTCACTATTTCAGATAGGCTGGTTGGCCAGCAAGCTCTaGGGGTCTACTTGTCTGCACCACCTGATGCTGGTGTTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PRSSLFQIGWLASKL*GSTCLHHLMLVLQA Trigger: TGCCTGTAACACCAGCATCAGGTGGTGCAGACAAGTAGACCCCAAGAGCTTGCTGGCCAACCAGCCTATCTGAAATAGTGAACTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTAGGGTGCGCAATACCGTaGGCCCCTTTGTGGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QSSHLQETSLGGGRDSPVGCAIP*APLWAK Trigger: CTTTGCCCACAAAGGGGCTCACGGTATTGCGCACCC...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCCACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACAGAAGAGAATAAAGGCTaGATGTGGGTGCGCAATACC | + |
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Preference number: 2 (lower is better) Translates to: RLHMLGLRPHTNTFASSTEENKG*MWVRNT Trigger: GGTATTGCGCACCCACATTCAGCCTTTATTCTCTTC...TGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTGGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCCACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACAGCACAGACTTTTATGTaGGTCCTGGGGATTAGAACT | + |
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Preference number: 2 (lower is better) Translates to: RLHMLGLRPHTNTFASSTAQTFM*VLGIRT Trigger: AGTTCTAATCCCCAGGACTCACATAAAAGTCTGTGC...TGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACACATAATGAGGCTGTGCAGAAATaGAAAGTGGCTCCAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HMLGLRPHTNTFASSTHNEAVQK*KVAPTQ Trigger: CTGAGTTGGAGCCACTTTTCATTTCTGCACAGCCTC...ATTATGTGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CAA 90 bp | GAACAGGAGATGGAGACACAGAGATGCATAAACTCACTCAGGATATaGTTACAGGACATGCAGGGGATCCAATCCCTTCCACACCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: EQEMETQRCINSLRI*LQDMQGIQSLPHLP Trigger: CGGAAGGTGTGGAAGGGATTGGATCCCCTGCATGTCCTGTAACAATATCCTGAGTGAGTTTATGCATCTCTGTGTCTCCATCTCCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTCCATTTAGGCTGCTGGAGGGTGAACACTGAAGAATCCACACAGCAAGCTAACAAAATGTCTACATaGCCTTCTGGGCCGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NFHLGCWRVNTEESTQQANKMST*PSGPQA Trigger: GGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTT...AGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTATCAGAGACATTCTCCTaGCTCAGGCTCCACATGCTG | + |
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Preference number: 2 (lower is better) Translates to: QSSHLQETSLGGGRDSPVSETFS*LRLHML Trigger: CAGCATGTGGAGCCTGAGGCAGGAGAATGTCTCTGA...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTCCATTTAGGCTGCTGGAGGGTGAACACTGAAGAATCCACACAGCAAGCTTTGAGTCTTCTTCCTTaGTGCTCTCTCACCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: NFHLGCWRVNTEESTQQALSLLP*CSLTSV Trigger: CACGGAGGTGAGAGAGCATCAAGGAAGAAGACTCAA...AGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATACCACCTTTGAGGCTGTaGAGAAATGAAAAGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VTLMSITAEQEMETQRCIPPLRL*RNEKWL Trigger: GAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGG...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATAATGGGGGTATGCATGTaGCATGGAATAAATGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VTLMSITAEQEMETQRCIMGVCM*HGINVE Trigger: CTCCACATTTATTCCATGGCACATGCATACCCCCAT...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTATGGCACCATCCTCTCTaGTTTACAGGCACACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: QSSHLQETSLGGGRDSPVWHHPL*FTGTQN Trigger: ATTCTGTGTGCCTGTAAACCAGAGAGGATGGTGCCA...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTAGGTATGCATGTGCCATaGAATAAATGTGGAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QSSHLQETSLGGGRDSPVGMHVP*NKCGGQ Trigger: CTGACCTCCACATTTATTCCATGGCACATGCATACC...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATATGCAGAAATGAAAAGTaGCTCCAACTCAGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VTLMSITAEQEMETQRCICRNEK*LQLRKR Trigger: TCTTTTCCTGAGTTGGAGCCACTTTTCATTTCTGCA...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTTCCACACCTTCCGACCCTTCTCCTCAAAGTTCACATTTACAAGAAACTTTCCATTTAGGCTGCTaGAGGGTGAACACTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IPSTPSDPSPQSSHLQETFHLGC*RVNTEE Trigger: TTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAA...AGTTTCTTGTAAATGTGAACTTTGAGGAGAAGGGTCGGAAGGTGTGGAAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACAGGCACACAGAATGAGGCATGGTCAGATTTAATGGCAGCACTAAATTCATATTGGTTCTGGAGATaGAACCCAGGGCCTTGCATA | + |
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Preference number: 2 (lower is better) Translates to: FTGTQNEAWSDLMAALNSYWFWR*NPGPCI Trigger: TATGCAAGGCCCTGGGTTCCATCTCCAGAACCAATA...TGAATTTAGTGCTGCCATTAAATCTGACCATGCCTCATTCTGTGTGCCTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGTTTCAGATAGGCTGGTaGGCCAGCAAGCTCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGFQIGW*ASKLLG Trigger: CCCCAAGAGCTTGCTGGCCAACCAGCCTATCTGAAA...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCCACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACAGCCTGCAGCCCCTTATaGGGGAATTCAGAACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: RLHMLGLRPHTNTFASSTACSPL*GNSEQG Trigger: CCCCTGTTCTGAATTCCCCAATAAGGGGCTGCAGGC...TGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | GTACAGTGCAAGGAACAAAATGTCTACATGCCCTTCTaGGCCGCAGGCCGAGCAGGCAAGCTATGCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VQCKEQNVYMPF*AAGRAGKLCLQ Trigger: CTGGAGGCATAGCTTGCCTGCTCGGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTTCCTTGCACTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR GCA 72 bp | GGGGGTGGCAGGGACAGCCCAGTAGGGAAAGCATGTTaGACGAATGAGGAATTGAGTTTGATCCCCAGAACC | + |
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Preference number: 3 (lower is better) Translates to: GGGRDSPVGKAC*TNEELSLIPRT Trigger: GGTTCTGGGGATCAAACTCAATTCCTCATTCGTGCAACATGCTTTCCCTACTGGGCTGTCCCTGCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | CTGAAGGTGGGAGTGGTCATGAAATCTCGAGAGGGCTaGAAATCCAGGCCAGAAATCCTTCGCTGTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LKVGVVMKSREG*KSRPEILRCPR Trigger: CCTGGGACAGCGAAGGATTTCTGGCCTGGATTTCCAGCCCTCTCGAGATTTCATGACCACTCCCACCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR GCA 72 bp | CCAAATTCGTACAGTGCAAGGAACAAAATGTCTACATaGCCTTCTGGGCCGCAGGCCGAGCAGGCAAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: PNSYSARNKMST*PSGPQAEQASY Trigger: ATAGCTTGCCTGCTCGGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTTCCTTGCACTGTACGAATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGTTGGCCAGCAAGCTCTaGGGGTCTACTTGTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLLASKL*GSTCLH Trigger: GTGCAGACAAGTAGACCCCAAGAGCTTGCTGGCCAA...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | CACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACACATAATCTTGAGTCTTCTTCCTaGATGCTCTCTCACCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: HMLGLRPHTNTFASSTHNLESSS*MLSHLR Trigger: ACGGAGGTGAGAGAGCATCAAGGAAGAAGACTCAAG...ATTATGTGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | CAGGGACAGCCCAGTAGGGAAAGCATGTTGCACGAATaGGGAATTGAGTTTGATCCCCAGAACCTGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: QGQPSRESMLHE*GIEFDPQNLCK Trigger: TTTGCACAGGTTCTGGGGATCAAACTCAATTCCTCATTCGTGCAACATGCTTTCCCTACTGGGCTGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | TTTAGAAACCACAGATGGGGGTGGCACCATCCTCTCTaGTTTACAGGCACACAGAATGAGGCATGGTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: FRNHRWGWHHPL*FTGTQNEAWSD Trigger: ATCTGACCATGCCTCATTCTGTGTGCCTGTAAACCAGAGAGGATGGTGCCACCCCCATCTGTGGTTTCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTTCCACACCTTCCGACCCTTCTCCTCAAAGTTCACATTTACAAGAAACTGCTCTTGGGGTCTACTaGTCTGCACCACCTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: IPSTPSDPSPQSSHLQETALGVY*SAPPDA Trigger: AGCATCAGGTGGTGCAGACAAGTAGACCCCAAGAGC...AGTTTCTTGTAAATGTGAACTTTGAGGAGAAGGGTCGGAAGGTGTGGAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | AAGAAAAAGTTCTCTTCCAACTTGAGTCTTCTTCCTTaGTGCTCTCTCACCTCCGTGGGTACAGGGTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KKKFSSNLSLLP*CSLTSVGTGFP Trigger: GGGGAACCCTGTACCCACGGAGGTGAGAGAGCATCAAGGAAGAAGACTCAAGTTGGAAGAGAACTTTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | AAGAGAATAAAGGCTGAATGTGGGTGCGCAATACCGTaGGCCCCTTTGTGGGCAAAGGGAAAGAACGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: KRIKAECGCAIP*APLWAKGKNVL Trigger: TAGAACGTTCTTTCCCTTTGCCCACAAAGGGGCTCACGGTATTGCGCACCCACATTCAGCCTTTATTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR GCA 72 bp | TCCTGGGGATTAGAACTCAGGTCCTTAAGCTTGCACTaGAAGCCCTATTATGCACTGAACCATCTTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SWGLELRSLSLH*KPYYALNHLPC Trigger: GCAAGGAAGATGGTTCAGTGCATAATAGGGCTTGCAGTGCAAGCTTAAGGACCTGAGTTCTAATCCCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | CCTTGTCCACCTTTGAGGCTGTGCAGAAATGAAAAGTaGCTCCAACTCAGGAAAAGACACAGAGGGAATCTC | + |
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Preference number: 3 (lower is better) Translates to: PCPPLRLCRNEK*LQLRKRHRGNL Trigger: GAGATTCCCTCTGTGTCTTTTCCTGAGTTGGAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGGACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | TGCTGGTGTTACAGGCACAGACTTTTATGTGAGTCCTaGGGATTAGAACTCAGGTCCTTAAGCTTGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: CWCYRHRLLCES*GLELRSLSLHC Trigger: GCAGTGCAAGCTTAAGGACCTGAGTTCTAATCCCCAGGACTCACATAAAAGTCTGTGCCTGTAACACCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | CACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACACATAATTTACCTTGTCCACCTTaGAGGCTGTGCAGAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: HMLGLRPHTNTFASSTHNLPCPP*RLCRNE Trigger: TTCATTTCTGCACAGCCTCAAAGGTGGACAAGGTAA...ATTATGTGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATCTCGAGAGGGCTGGAAATCCAGGCCAGAAATCCTTCGCTGTCCCAGGTTGAATACAGCAGTATTTaGGATTACAACACAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: EISRGLEIQARNPSLSQVEYSSI*DYNTTE Trigger: CTCAGTTGTGTTGTAATCCAAAATACTGCTGTATTC...AACCTGGGACAGCGAAGGATTTCTGGCCTGGATTTCCAGCCCTCTCGAGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | CACCTGATGCTGGTGTTACAGGCACAGACTTTTATGTaGGTCCTGGGGATTAGAACTCAGGTCCTTAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: HLMLVLQAQTFM*VLGIRTQVLKL Trigger: AAGCTTAAGGACCTGAGTTCTAATCCCCAGGACTCACATAAAAGTCTGTGCCTGTAACACCAGCATCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | GTGGCACCATCCTCTCTGGTTTACAGGCACACAGAATaGGGCATGGTCAGATTTAATGGCAGCACTAAATTC | + |
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Preference number: 3 (lower is better) Translates to: VAPSSLVYRHTE*GMVRFNGSTKF Trigger: GAATTTAGTGCTGCCATTAAATCTGACCATGCCTCATTCTGTGTGCCTGTAAACCAGAGAGGATGGTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | TCAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTaGCAGGGACAGCCCAGTAGGGAAAGCATGTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SKFTFTRNFIRG*QGQPSRESMLH Trigger: GTGCAACATGCTTTCCCTACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | TCTCAATTTCCATTTAGGCTGCTGGAGGGTGAACACTaGAGAATCCACACAGCAAGCTTCAAAGAGCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SQFPFRLLEGEH*RIHTASFKEQG Trigger: ACCTTGCTCTTTGAAGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR CCA 72 bp | ACTAACTCTCAGGATCTCAATTTCCATTTAGGCTGCTaGAGGGTGAACACTGAAGAATCCACACAGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: TNSQDLNFHLGC*RVNTEESTQQA Trigger: AGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGATCCTGAGAGTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| 3UTR TCA 72 bp | TTTATTACCTTGTCCACCTTTGAGGCTGTGCAGAAATaGAAAGTGGCTCCAACTCAGGAAAAGACACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FITLSTFEAVQK*KVAPTQEKTQR Trigger: CCTCTGTGTCTTTTCCTGAGTTGGAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGGACAAGGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR GCA 72 bp | AGAACTAACTCTCAGGATCTCAATTTCCATTTAGGCTaGTGGAGGGTGAACACTGAAGAATCCACACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RTNSQDLNFHLG*WRVNTEESTQQ Trigger: TTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGATCCTGAGAGTTAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR GCA 72 bp | TCAATCACGGCTGAACAGGAGATGGAGACACAGAGATaGATAAACTCACTCAGGATATTGTTACAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: SITAEQEMETQR*INSLRILLQDM Trigger: CATGTCCTGTAACAATATCCTGAGTGAGTTTATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CCA 72 bp | CATCCTCTCTGGTTTACAGGCACACAGAATGAGGCATaGTCAGATTTAATGGCAGCACTAAATTCAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HPLWFTGTQNEA*SDLMAALNSEG Trigger: ACCTTCTGAATTTAGTGCTGCCATTAAATCTGACCATGCCTCATTCTGTGTGCCTGTAAACCAGAGAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CCA 72 bp | TCGAGTCTCAAGGTTTACCACAAGAAACGTGTCTGGTaGTTGACTGACTCACTGACAAGAGTTTTTAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLKVYHKKRVW*LTDSLTRVFRS Trigger: TGATCTAAAAACTCTTGTCAGTGAGTCAGTCAACCACCAGACACGTTTCTTGTGGTAAACCTTGAGACTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR TCA 72 bp | GAATTTTCCAAAGCTATTTATTACCTTGTCCACCTTTaGGGCTGTGCAGAAATGAAAAGTGGCTCCAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: EFSKAIYYLVHL*GCAEMKSGSNS Trigger: TGAGTTGGAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGGACAAGGTAATAAATAGCTTTGGAAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR TCA 72 bp | TGCCTCCACATACACACACATGCACATATGCATAGATaGACACACACATACACAAAGGAAAATACAATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLHIHTHAHMHR*THTYTKENTIV Trigger: TACAATTGTATTTTCCTTTGTGTATGTGTGTGTTCATCTATGCATATGTGCATGTGTGTGTATGTGGAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CCA 72 bp | CACAAAGGAAAATACAATTGTACGCAAAGCACAGTGTaGATAACCAGATACAGTTATTTATACACACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HKGKYNCTQSTV*ITRYSYLYTQG Trigger: CCCTTGTGTGTATAAATAACTGTATCTGGTTATCCACACTGTGCTTTGCGTACAATTGTATTTTCCTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGCATGGCTTTCTTCTTTaGGGGGTTCTCCGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGHGFLL*GVLRST Trigger: GGTGGACCGGAGAACCCCGCAAAGAAGAAAGCCATG...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGTTCGGTCCTCCATCTTaGAAGCTGAGCCCACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGFGPPS*KLSPLR Trigger: TCGAAGTGGGCTCAGCTTTCAAGATGGAGGACCGAA...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | CGTACAGTGCAAGGAACAAAATGTCTACATGCCCTTCTGGGCCGCAGGCCGAGCCCTGGGTGGGATCCCTaGAGACCACTCTCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTVQGTKCLHALLGRRPSPGWDP*RPLSRH Trigger: GTGTCTGGAGAGTGGTCTGCAGGGATCCCACCCAGG...GCTCGGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTTCCTTGCACTGTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | CGTACAGTGCAAGGAACAAAATGTCTACATGCCCTTCTGGGCCGCAGGCCGAGCAGTCGTCGTCCTGGGTaGGATCCCTGCAGACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVQGTKCLHALLGRRPSSRRPG*DPCRPL Trigger: GAGTGGTCTGCAGGGATCCCACCCAGGACGACGACT...GCTCGGCCTGCGGCCCAGAAGGGCATGTAGACATTTTGTTCCTTGCACTGTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGGCTTCCTGGAATCTTTaGAGACTCGAGGGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGASWNL*RLEGRL Trigger: GAGCCTTCCCTCGAGTCTCCAAAGATTCCAGGAAGC...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGCCCGGGGCTGTCAGCTaGAGGCAGCGCAGACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLPGAVS*RQRRPR Trigger: CCTCGGTCTGCGCTGCCTGCAGCTGACAGCCCCGGG...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | GATAGGCTGGTTGGCCAGCAAGCTCTTGGGGTCTACTaGTCTGCACCACCTGATGCTGGTGTTACAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DRLVGQQALGVY*SAPPDAGVTGT Trigger: TGTGCCTGTAACACCAGCATCAGGTGGTGCAGACAAGTAGACCCCAAGAGCTTGCTGGCCAACCAGCCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGGGTGAACACTGAAGAATCCACACAGCAAGCTTCAAAGAGCAAGGTCGGAAGGCTCCCAGCTTaGTCTTCTGAGGCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CWRVNTEESTQQASKSKVGRLPA*SSEAWM Trigger: CATCCAGGCCTCAGAAGACCAAGCTGGGAGCCTTCC...GACCTTGCTCTTTGAAGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | TCACTATTTCAGATAGGCTGGTTGGCCAGCAAGCTCTaGGGGTCTACTTGTCTGCACCACCTGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFQIGWLASKL*GSTCLHHLMLV Trigger: CACCAGCATCAGGTGGTGCAGACAAGTAGACCCCAAGAGCTTGCTGGCCAACCAGCCTATCTGAAATAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR TCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATAAGACTCTGGGATCTCTaGGCTCTGGGCAGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTLMSITAEQEMETQRCIRLWDL*ALGSFT Trigger: GGTGAAGCTGCCCAGAGCTCAGAGATCCCAGAGTCT...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCATGGAATAAATGTGGAGGTCAGAACAAAACTTTCAGGGGTCACCTCTCAACCCCAGGGCTTCTaGCCAGTTCGGTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCHGINVEVRTKLSGVTSQPQGF*PVRWRL Trigger: CAGCCTCCACCGAACTGGGCAGAAGCCCTGGGGTTG...AGAGGTGACCCCTGAAAGTTTTGTTCTGACCTCCACATTTATTCCATGGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGGGGATCTCTGAGCTCTaGGCAGCTTCACCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLGISEL*AASPAS Trigger: GGAAGCTGGTGAAGCTGCCCAGAGCTCAGAGATCCC...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR TCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATAACTCAGGGATCCCAGTaGCCAACAGGGATCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLMSITAEQEMETQRCITQGSQ*PTGICG Trigger: TCCACAGATCCCTGTTGGTCACTGGGATCCCTGAGT...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR TCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATACCCAGCTTGGTCTTCTaGGGCCTGGATGTTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTLMSITAEQEMETQRCIPSLVF*GLDVEA Trigger: TGCTTCAACATCCAGGCCTCAGAAGACCAAGCTGGG...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTACCATTCCCATGCCCCTaGACCAATCTTCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSHLQETSLGGGRDSPVPFPCP*TNLPAG Trigger: CCCTGCTGGAAGATTGGTGCAGGGGCATGGGAATGG...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAGGGTGAACACTGAAGAATCCACACAGCAAGCTTCAAAGAGCAAGGTCGGATGTCCATTCCCATaGCCCTGCACCAATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWRVNTEESTQQASKSKVGCPFP*PCTNLP Trigger: TGGAAGATTGGTGCAGGGGCATGGGAATGGACATCC...GACCTTGCTCTTTGAAGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | AATTTCCATTTAGGCTGCTGGAGGGTGAACACTGAAGAATCCACACAGCAAGCTAGCCTCCTCAGCCCTTaGTTCTTCATCCCGACTACG | + |
|
Preference number: 4 (lower is better) Translates to: NFHLGCWRVNTEESTQQASLLSP*FFIPTT Trigger: CGTAGTCGGGATGAAGAAGCAAGGGCTGAGGAGGCT...AGCTTGCTGTGTGGATTCTTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGACCAACAGGGATCTGTaGATGTCCATTCCCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLTNRDL*MSIPMP Trigger: GGGCATGGGAATGGACATCCACAGATCCCTGTTGGT...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR GCA 90 bp | CTATCAACCTCTCCTTTCCACCACAGGCTTCTAAAGAGGGTATCACCGCATTTGTGCTGTTGTAATTGCTaGCCTGGGATTTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSPFHHRLLKRVSPHLCCCNC*PGISSS Trigger: GCTGGAGGAAATCCCAGGGCAGCAATTACAACAGCA...CAAATGCGGTGATACCCTCTTTAGAAGCCTGTGGTGGAAAGGAGAGGTTGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAAGGAAAATACAATTGTACGCAAAGCACAGTGTGGATAACCAGATACAGGACACCGCCCCTCCCTaGGAACTCCCGGGGTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQRKIQLYAKHSVDNQIQDTAPP*ELPGYR Trigger: TCTATACCCCGGGAGTTCCCAGGGAGGGGCGGTGTC...CTGTATCTGGTTATCCACACTGTGCTTTGCGTACAATTGTATTTTCCTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | GTGACCCTAATGTCAATCACGGCTGAACAGGAGATGGAGACACAGAGATGCATACTGTTTTGTTCTTGGTaGCTTCAGCATCAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLMSITAEQEMETQRCILFCSW*LQHQAG Trigger: TCCTGCTTGATGCTGAAGCCACCAAGAACAAAACAG...TATGCATCTCTGTGTCTCCATCTCCTGTTCAGCCGTGATTGACATTAGGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | ACTAACTCTCAGGATCTCAATTTCCATTTAGGCTGCTGGAGGGTGAACACTGAATGGTCTTCTGAGGCCTaGATGTTGAAGCAGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSQDLNFHLGCWRVNTEWSSEA*MLKQVH Trigger: ATGCACCTGCTTCAACATCCAGGCCTCAGAAGACCA...TTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGATCCTGAGAGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | AAAGAAAAAGTTCTCTTCCAACTTGAGTCTTCTTCCTaGATGCTCTCTCACCTCCGTGGGTACAGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKVLFQLESSS*MLSHLRGYRVP Trigger: GGGAACCCTGTACCCACGGAGGTGAGAGAGCATCAAGGAAGAAGACTCAAGTTGGAAGAGAACTTTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | TGTGAGTCCTGGGGATTAGAACTCAGGTCCTTAAGCTaGCACTGCAAGCCCTATTATGCACTGAACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CESWGLELRSLS*HCKPYYALNHL Trigger: AAGATGGTTCAGTGCATAATAGGGCTTGCAGTGCAAGCTTAAGGACCTGAGTTCTAATCCCCAGGACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCTTCCACACCTTCCGACCCTTCTCCTCAAAGTTCACATTTACAAGAAACTTCCTCAATTTCTGCGTaGCTACAGTACTCAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IPSTPSDPSPQSSHLQETSSISA*LQYSGI Trigger: GATCCCTGAGTACTGTAGCCACGCAGAAATTGAGGA...AGTTTCTTGTAAATGTGAACTTTGAGGAGAAGGGTCGGAAGGTGTGGAAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGGCACACAGAATGAGGCATGGTCAGATTTAATGGCAGCACTAAATTCATCTGCTTCCTCCTCCTaGAGCGAATCTTACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTGTQNEAWSDLMAALNSSASSS*SESYLQ Trigger: CTGGAGGTAAGATTCGCTCCAGGAGGAGGAAGCAGA...TGAATTTAGTGCTGCCATTAAATCTGACCATGCCTCATTCTGTGTGCCTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTTCACATTTACAAGAAACTTCATTAGGGGGTGGCAGGGACAGCCCAGTATCGCTGTTTTGTTCTTaGTGGCTTCAGCATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSHLQETSLGGGRDSPVSLFCS*WLQHQA Trigger: TGCTTGATGCTGAAGCCACCAAGAACAAAACAGCGA...TACTGGGCTGTCCCTGCCACCCCCTAATGAAGTTTCTTGTAAATGTGAACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | ATGGAGACACAGAGATGCATAAACTCACTCAGGATATaGTTACAGGACATGCAGGGGATCCAATCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: METQRCINSLRI*LQDMQGIQSLP Trigger: TGGAAGGGATTGGATCCCCTGCATGTCCTGTAACAATATCCTGAGTGAGTTTATGCATCTCTGTGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | AGCCCAGTAGGGAAAGCATGTTGCACGAATGAGGAATaGAGTTTGATCCCCAGAACCTGTGCAAAAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVGKACCTNEE*SLIPRTCAKRK Trigger: TTTTCTTTTTGCACAGGTTCTGGGGATCAAACTCAATTCCTCATTCGTGCAACATGCTTTCCCTACTGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | AGTCTCAAGGTTTACCACAAGAAACGTGTCTGGTGGTaGACTGACTCACTGACAAGAGTTTTTAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLKVYHKKRVWW*TDSLTRVFRSR Trigger: TCTTGATCTAAAAACTCTTGTCAGTGAGTCAGTCAACCACCAGACACGTTTCTTGTGGTAAACCTTGAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | AGAATTTTCCAAAGCTATTTATTACCTTGTCCACCTTaGAGGCTGTGCAGAAATGAAAAGTGGCTCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RIFQSYLLPCPP*RLCRNEKWLQL Trigger: GAGTTGGAGCCACTTTTCATTTCTGCACAGCCTCAAAGGTGGACAAGGTAATAAATAGCTTTGGAAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAAGGAAAATACAATTGTACGCAAAGCACAGTGTGGATAACCAGATACAGTTTCCTCCAGCATATTaGCTCTTGCTTAAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRKIQLYAKHSVDNQIQFPPAY*LLLKIF Trigger: AAAAATCTTAAGCAAGAGCCAATATGCTGGAGGAAA...CTGTATCTGGTTATCCACACTGTGCTTTGCGTACAATTGTATTTTCCTTTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| 3UTR CAA 72 bp | CAGTTATTTATACACACAAGGGAATACAGCAGTATTTaGGATTACAACACAACTGAGTTGTTGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLFIHTREYSSI*DYNTTELLFSH Trigger: GTGGGAAAACAACAACTCAGTTGTGTTGTAATCCAAAATACTGCTGTATTCCCTTGTGTGTATAAATAACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGGCAGAAGCTCACTAAGCCCACTCCCAGCCCCTCACTGGGGGATTCTGGGCAGCCTCCTCAGCCCTaGCTTCTTCATCCCGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: ARQKLTKPTPSPSLGDSGQPPQP*LLHPDY Trigger: GTAGTCGGGATGAAGAAGCAAGGGCTGAGGAGGCTG...CCCAGAATCCCCCAGTGAGGGGCTGGGAGTGGGCTTAGTGAGCTTCTGCCTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS CCA 90 bp | GCACCCAGGAGCAACCCCAGGGCTTCTGCCCAGTTCGGTGGAGGCTaGTTTGAATTCGGTAGCGGTGGGTTAGGGTTAAGCTTCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APRSNPRASAQFGGG*FEFGSGGLGLSFKR Trigger: CCTCTTGAAGCTTAACCCTAACCCACCGCTACCGAATTCAAACCAGCCTCCACCGAACTGGGCAGAAGCCCTGGGGTTGCTCCTGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS TCA 90 bp | GACTCGAGGGAAGGCTCCCAGCTTGGTCTTCTGAGGCCTGGATGTTaGAGCAGGTGCATCATGAGGTACCGACACAGCCCTTCTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: DSREGSQLGLLRPGC*SRCIMRYRHSPSST Trigger: GGTGCTAGAAGGGCTGTGTCGGTACCTCATGATGCACCTGCTTCAACATCCAGGCCTCAGAAGACCAAGCTGGGAGCCTTCCCTCGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS CCA 90 bp | TCCCGGGGCTGTCAGCTGCAGGCAGCGCAGACCGAGGAAGATCGCTaGGATCCCTCCAGACTCTTTTCTTCTTCCATACTGTCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGCQLQAAQTEEDR*DPSRLFSSSILSLP Trigger: AGGAAGAGACAGTATGGAAGAAGAAAAGAGTCTGGAGGGATCCCAGCGATCTTCCTCGGTCTGCGCTGCCTGCAGCTGACAGCCCCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS GCA 90 bp | CCGACTACGGATTGCAGCATCCATGTAGAATATGACCTGTACTACTaGACCCAGGAGCAACCCCAGGGCTTCTGCCCAGTTCGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTDCSIHVEYDLYY*TQEQPQGFCPVRWR Trigger: CCTCCACCGAACTGGGCAGAAGCCCTGGGGTTGCTCCTGGGTGCAGTAGTACAGGTCATATTCTACATGGATGCTGCAATCCGTAGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS GCA 90 bp | TGTGCCCAGTGGCAAGAGGACCCCATTCAAGGTCTCCTCAATTTCTaGGTGGCTACAGTACTCAGGGATCCCAGTGACCAACAGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CAQWQEDPIQGLLNF*VATVLRDPSDQQGS Trigger: AGATCCCTGTTGGTCACTGGGATCCCTGAGTACTGTAGCCACGCAGAAATTGAGGAGACCTTGAATGGGGTCCTCTTGCCACTGGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCACATGCTGGGGTTACGGCCACACACCAACACCTTTGCTTCTTCCACATTTCGGTCCTCCATCTaGAAAGCTGAGCCCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLHMLGLRPHTNTFASSTFRSSI*KAEPTS Trigger: CGAAGTGGGCTCAGCTTTCAAGATGGAGGACCGAAA...TGTGGAAGAAGCAAAGGTGTTGGTGTGTGGCCGTAACCCCAGCATGTGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 90 bp | TTGCTTCTTCATCCCGACTACGGATTGCAGCATCCATGTAGAATATaGCCTGTACTACTGCACCCAGGAGCAACCCCAGGGCTTCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LLLHPDYGLQHPCRI*PVLLHPGATPGLLP Trigger: GGGCAGAAGCCCTGGGGTTGCTCCTGGGTGCAGTAGTACAGGTCATATTCTACATGGATGCTGCAATCCGTAGTCGGGATGAAGAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 90 bp | CACCATGGTCCTCTGTGTTCTTCCAATAGTTTCGGTCCTCCATCTTaGAAGCTGAGCCCACTTCGACGCCCAGCCCGGGTTCCTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: HHGPLCSSNSFGPPS*KLSPLRRPARVPSL Trigger: TAAAGAAGGAACCCGGGCTGGGCGTCGAAGTGGGCTCAGCTTTCAAGATGGAGGACCGAAACTATTGGAAGAACACAGAGGACCATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS-3UTR CAA 90 bp | GAAATCTCGAGAGGGCTGGAAATCCAGGCCAGAAATCCTTCGCTGTCCCAGGTTATCGCTGTTTTGTTCTaGGTGGCTTCAGCATCAAGC | + |
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Preference number: 5 (lower is better) Translates to: EISRGLEIQARNPSLSQVIAVLF*VASASS Trigger: GCTTGATGCTGAAGCCACCAAGAACAAAACAGCGAT...AACCTGGGACAGCGAAGGATTTCTGGCCTGGATTTCCAGCCCTCTCGAGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS-3UTR CAA 90 bp | TGTGGAGGTCAGAACAAAACTTTCAGGGGTCACCTCTTTCTTTCCGTGATGTGGTGCGAACTAGAGGTTTaGGAGGGTCACCATGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CGGQNKTFRGHLFLSVMWCELEV*EGHHGP Trigger: AGGACCATGGTGACCCTCCAAAACCTCTAGTTCGCA...CCACATCACGGAAAGAAAGAGGTGACCCCTGAAAGTTTTGTTCTGACCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS-3UTR CAA 90 bp | ACTAACTCTCAGGATCTCAATTTCCATTTAGGCTGCTGGAGGGTGAACACTGAATCTGAGGCCTGGATGTaGAAGCAGGTGCATCATGAG | + |
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Preference number: 5 (lower is better) Translates to: TNSQDLNFHLGCWRVNTESEAWM*KQVHHE Trigger: CTCATGATGCACCTGCTTCAACATCCAGGCCTCAGA...TTCAGTGTTCACCCTCCAGCAGCCTAAATGGAAATTGAGATCCTGAGAGTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGGCACACAGAATGAGGCATGGTCAGATTTAATGGCAGCACTAAATTCATTCACAAAGGGTTTTTaGTTGCTCTTGACAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: FTGTQNEAWSDLMAALNSFTKGF*LLLTDS Trigger: AGAGTCTGTCAAGAGCAACAAAAAACCCTTTGTGAA...TGAATTTAGTGCTGCCATTAAATCTGACCATGCCTCATTCTGTGTGCCTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS GCA 72 bp | CCAACAGGGATCTGTGGATGTCCATTCCCATGCCCCTaGACCAATCTTCCAGCAGGGTCATGGCCACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PTGICGCPFPCP*TNLPAGSWPRA Trigger: AGCCCGTGGCCATGACCCTGCTGGAAGATTGGTGCAGGGGCATGGGAATGGACATCCACAGATCCCTGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CAA 72 bp | GGAAGGCTCCCAGCTTGGTCTTCTGAGGCCTGGATGTaGAAGCAGGTGCATCATGAGGTACCGACACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRLPAWSSEAWM*KQVHHEVPTQP Trigger: GGGCTGTGTCGGTACCTCATGATGCACCTGCTTCAACATCCAGGCCTCAGAAGACCAAGCTGGGAGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 72 bp | GAAGGCTCCCAGCTTGGTCTTCTGAGGCCTGGATGTTaGAGCAGGTGCATCATGAGGTACCGACACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: EGSQLGLLRPGC*SRCIMRYRHSP Trigger: AGGGCTGTGTCGGTACCTCATGATGCACCTGCTTCAACATCCAGGCCTCAGAAGACCAAGCTGGGAGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS GCA 72 bp | GCTTCCTCCTCCTGGAGCGAATCTTACCTCCAGGCCTaGGAACTAGAGGTTTTGGAGGGTCACCATGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ASSSWSESYLQA*ELEVLEGHHGP Trigger: AGGACCATGGTGACCCTCCAAAACCTCTAGTTCGCAGGCCTGGAGGTAAGATTCGCTCCAGGAGGAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 72 bp | CCTCTGTGTTCTTCCAATAGTTTCGGTCCTCCATCTTaGAAGCTGAGCCCACTTCGACGCCCAGCCCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: PLCSSNSFGPPS*KLSPLRRPARV Trigger: AACCCGGGCTGGGCGTCGAAGTGGGCTCAGCTTTCAAGATGGAGGACCGAAACTATTGGAAGAACACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CCA 72 bp | CAGTACTCAGGGATCCCAGTGACCAACAGGGATCTGTaGATGTCCATTCCCATGCCCCTGCACCAATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QYSGIPVTNRDL*MSIPMPLHQSS Trigger: GGAAGATTGGTGCAGGGGCATGGGAATGGACATCCACAGATCCCTGTTGGTCACTGGGATCCCTGAGTACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 72 bp | CATCCCGACTACGGATTGCAGCATCCATGTAGAATATaGCCTGTACTACTGCACCCAGGAGCAACCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HPDYGLQHPCRI*PVLLHPGATPG Trigger: CCCTGGGGTTGCTCCTGGGTGCAGTAGTACAGGTCATATTCTACATGGATGCTGCAATCCGTAGTCGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS TCA 72 bp | GTTCTTCCAATAGTTTCGGTCCTCCATCTTGAAAGCTaGGCCCACTTCGACGCCCAGCCCGGGTTCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLPIVSVLHLES*AHFDAQPGFLL Trigger: AAGAAGGAACCCGGGCTGGGCGTCGAAGTGGGCTCAGCTTTCAAGATGGAGGACCGAAACTATTGGAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS GCA 72 bp | TGGCAAGAGGACCCCATTCAAGGTCTCCTCAATTTCTaGGTGGCTACAGTACTCAGGGATCCCAGTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: WQEDPIQGLLNF*VATVLRDPSDQ Trigger: TTGGTCACTGGGATCCCTGAGTACTGTAGCCACGCAGAAATTGAGGAGACCTTGAATGGGGTCCTCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS GCA 72 bp | GATTGCAGCATCCATGTAGAATATGACCTGTACTACTaGACCCAGGAGCAACCCCAGGGCTTCTGCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DCSIHVEYDLYY*TQEQPQGFCPV Trigger: AACTGGGCAGAAGCCCTGGGGTTGCTCCTGGGTGCAGTAGTACAGGTCATATTCTACATGGATGCTGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CAA 90 bp | TCCTCCTGGAGCGAATCTTACCTCCAGGCCTGCGAACTAGAGGTTTaGGAGGGTCACCATGGTCCTCTGTGTTCTTCCAATAGTTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: SSWSESYLQACELEV*EGHHGPLCSSNSFG Trigger: ACCGAAACTATTGGAAGAACACAGAGGACCATGGTGACCCTCCAAAACCTCTAGTTCGCAGGCCTGGAGGTAAGATTCGCTCCAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CAA 72 bp | AGCGAATCTTACCTCCAGGCCTGCGAACTAGAGGTTTaGGAGGGTCACCATGGTCCTCTGTGTTCTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SESYLQACELEV*EGHHGPLCSSN Trigger: ATTGGAAGAACACAGAGGACCATGGTGACCCTCCAAAACCTCTAGTTCGCAGGCCTGGAGGTAAGATTCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CAA 72 bp | ACCATCTTCTTCTTCTTCCTCGTGGGGACAGGGATCTaGTTAGAGGCCCAGGTCATGGCTTTCTTCTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: TIFFFFLVGTGI*LEAQVMAFFFA Trigger: CGCAAAGAAGAAAGCCATGACCTGGGCCTCTAACAAGATCCCTGTCCCCACGAGGAAGAAGAAGAAGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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| CDS CAA 72 bp | TTCCATACTGTCTCTTCCTGCTTCACAAAGGGTTTTTaGTTGCTCTTGACAGACTCTGGGATCTCTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FHTVSSCFTKGF*LLLTDSGISEL Trigger: GAGCTCAGAGATCCCAGAGTCTGTCAAGAGCAACAAAAAACCCTTTGTGAAGCAGGAAGAGACAGTATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038163.8 |
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