Pregenerated sensors for PNMA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050424Ensembl transcript IDs: ENSMUST00000051569.7, ENSMUST00000114540.4, ENSMUST00000152209.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGCCAGGCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTaGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SCQATLQVGRVWGQP*QLPGRVVFTCLSLL Trigger: AAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGCCTGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 90 bp | CACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTaGCAGAGTTGTATTCACCTGCCTGTCCCTGCTTGCTCTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: HPPGRQGLGPALAAA*QSCIHLPVPACSLE Trigger: TTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR GCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTaGCTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: VWGQPWQLPGRVVFT*LSLLALWNSPAALD Trigger: GTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR TCA 90 bp | GGGAGAGCCAGGCAGTTGGCAGAACCCTTGAGATGGCCTTTTCTGTaGTGTCCACCTGTTTGGTTATGGGTGGCAGATGGAGGATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GRARQLAEPLRWPFL*CPPVWLWVADGGWH Trigger: GTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGTTCTGCCAACTGCCTGGCTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR TCA 90 bp | GAAGGGGCATTTGTGTTGGGAGAGCCAGGCAGTTGGCAGAACCCTTaGGATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: EGAFVLGEPGSWQNP*DGLFCDVHLFGYGW Trigger: CCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGTTCTGCCAACTGCCTGGCTCTCCCAACACAAATGCCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR TCA 90 bp | ATTATAAGTAATAACAGGAGAGGAATATCACACATAGTCCCAAGTTaGAGTCATCAGCCTTGTCAACATCCATGGTTCCAGAACCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: IISNNRRGISHIVPS*SHQPCQHPWFQNQA Trigger: AGCCTGGTTCTGGAACCATGGATGTTGACAAGGCTGATGACTTCAACTTGGGACTATGTGTGATATTCCTCTCCTGTTATTACTTATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR CAA 90 bp | GGCACCTCGGCAAAGCTGCCAGGCCACCCTCCAGGTCGGCAGGGTTaGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: GTSAKLPGHPPGRQG*GPALAAAWQSCIHL Trigger: CAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGCCTGGCAGCTTTGCCGAGGTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CAA 90 bp | AGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTaGTATTCACCTGCCTGTCCCTGCTTGCTCTCTGGAATTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RSAGFGASLGSCLAE*YSPACPCLLSGILQ Trigger: CTGGAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CAA 90 bp | GTTGGCAGAACCCTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTaGGTTATGGGTGGCAGATGGAGGATGGCACCTCGGCAAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VGRTLEMAFSVMSTC*VMGGRWRMAPRQSC Trigger: GCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGTTCTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CAA 90 bp | CAGGAGAGGAATATCACACATAGTCCCAAGTTGAAGTCATCAGCCTaGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QERNITHSPKLKSSA*STSMVPEPGSGTQV Trigger: AACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGGCTGATGACTTCAACTTGGGACTATGTGTGATATTCCTCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCACATAGTCCCAAGTTaGAGTCATCAGCCTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LLTQGLLLSQEITHYSVVHIVPS*SHQPCQ Trigger: TTGACAAGGCTGATGACTTCAACTTGGGACTATGTG...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR GCA 72 bp | ATGGGTGGCAGATGGAGGATGGCACCTCGGCAAAGCTaGCAGGCCACCCTCCAGGTCGGCAGGGTTTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: MGGRWRMAPRQS*QATLQVGRVWG Trigger: GCCCCAAACCCTGCCGACCTGGAGGGTGGCCTGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | GCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTaGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ATLQVGRVWGQP*QLPGRVVFTCL Trigger: CAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR GCA 72 bp | TCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTaGCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SRSAGFGASLGS*LAELYSPACPC Trigger: GCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | GGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTaGCAGAGTTGTATTCACCTGCCTGTCCCTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GRQGLGPALAAA*QSCIHLPVPAC Trigger: GCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR-3UTR CAA 90 bp | GCACGTGATAGGGGAAGGGACTCACTGGACAGCTGGGTCACTATGAGGTTAACACCAGGTCGGCAGGGTTaGGGGCCAGCCTTGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ARDRGRDSLDSWVTMRLTPGRQG*GPALAA Trigger: AGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGG...TGTTAACCTCATAGTGACCCAGCTGTCCAGTGAGTCCCTTCCCCTATCACGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | GAGGGCATTAACCCTGTGGTGCCATGTGCCCCAGCCTaGGGCTTTTCTCAGGCACTAGTGTCCTGTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: EGINPVVPCAPA*GFSQALVSCQG Trigger: ACCCTGACAGGACACTAGTGCCTGAGAAAAGCCCCAGGCTGGGGCACATGGCACCACAGGGTTAATGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | GGAACTCAGGTTAGCACACACATCTCCCGGGTCCTTTaGGTCCTGAGGCTTGCAGGTTTCACAGGAGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: GTQVSTHISRVL*VLRLAGFTGAG Trigger: CCCCGCTCCTGTGAAACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR GCA 72 bp | AGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTaGCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RVSRRKLPCVGT*LPGPLGPEACR Trigger: CCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | TCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGATaGAGGATGGCACCTCGGCAAAGCTGCCAGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: SVMSTCLVMGGR*RMAPRQSCQAT Trigger: GGTGGCCTGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR-3UTR CAA 90 bp | GCACGTGATAGGGGAAGGGACTCACTGGACAGCTGGGTCACTATGAGGTTAACAGAAGGGGCATTTGTGTaGGGAGAGCCAGGCAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: ARDRGRDSLDSWVTMRLTEGAFV*GEPGSW Trigger: CCAACTGCCTGGCTCTCCCAACACAAATGCCCCTTC...TGTTAACCTCATAGTGACCCAGCTGTCCAGTGAGTCCCTTCCCCTATCACGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR GCA 72 bp | CCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTaGTCACACAAAACCTGTCCTGCACACTCCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PHTQSPLSAAPV*SHKTCPAHSQA Trigger: AGCCTGGGAGTGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR GCA 72 bp | GCCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGCTTaGTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: AWQSCIHLPVPA*SLEFSSSPGQK Trigger: CTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | GGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTaGCAGATGGAGGATGGCACCTCGGCAAAGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: GLFCDVHLFGYG*QMEDGTSAKLP Trigger: TGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR-3UTR CAA 90 bp | GTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACAGCTTTATACAGGAGCAGCTTCTGCTGCTCCTGTTaGCTCACACAAAACCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: VGSQGLQLPSLTALYRSSFCCSC*LTQNLS Trigger: GGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAA...GCTGCTCCTGTATAAAGCTGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | AGAGTTGTATTCACCTGCCTGTCCCTGCTTGCTCTCTaGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RVVFTCLSLLAL*NSPAALDKREQ Trigger: CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | CTCCCTTATAGCATACACAGTCCAGGCACAGGGAATTaGTGGAACCATAGCATGCAACACCCCACCAACCCT | + |
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Preference number: 3 (lower is better) Translates to: LPYSIHSPGTGN*WNHSMQHPTNP Trigger: AGGGTTGGTGGGGTGTTGCATGCTATGGTTCCACCAATTCCCTGTGCCTGGACTGTGTATGCTATAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR TCA 72 bp | TTTGTGTTGGGAGAGCCAGGCAGTTGGCAGAACCCTTaGGATGGCCTTTTCTGTGATGTCCACCTGTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: FVLGEPGSWQNP*DGLFCDVHLFG Trigger: ACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGTTCTGCCAACTGCCTGGCTCTCCCAACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CCA 72 bp | CCTTATAGCATACACAGTCCAGGCACAGGGAATTGGTaGAACCATAGCATGCAACACCCCACCAACCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: PYSIHSPGTGNW*NHSMQHPTNPR Trigger: TCTAGGGTTGGTGGGGTGTTGCATGCTATGGTTCCACCAATTCCCTGTGCCTGGACTGTGTATGCTATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGCATGCAACACCCCACCAACCCTAGAAAGTAAAATTATAAGTAATAACAGGTTGAAGTCATCAGCCTaGTCAACATCCATGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: IACNTPPTLESKIISNNRLKSSA*STSMVP Trigger: TGGAACCATGGATGTTGACAAGGCTGATGACTTCAA...CCTGTTATTACTTATAATTTTACTTTCTAGGGTTGGTGGGGTGTTGCATGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| 3UTR CAA 72 bp | GGCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTaGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHPPGRQGLGPA*AAAWQSCIHLP Trigger: AGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | CTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTAAGGACTCAAGGGTGCTaGCCTCATGGGGCTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LQVGRVWGQPWQLPGRVVRTQGC*PHGAPL Trigger: TAGGGGAGCCCCATGAGGGCAGCACCCTTGAGTCCT...TACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCAGGGTGCTGCCCTCATaGGGCTCCCCTAGAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VWGQPWQLPGRVVFTCLSRVLPS*GSPRAV Trigger: CACAGCTCTAGGGGAGCCCCATGAGGGCAGCACCCT...GGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | CTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTGGGCTCTGCTGCACTaGTTTTTGCAGCAGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPCVGTCLPGPLGPEACRWALLH*FLQQGL Trigger: GAGCCCCTGCTGCAAAAAGCAGTGCAGCAGAGCCCA...CCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CAA 72 bp | GGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTaGTATTCACCTGCCTGTCCCTGCTTGCTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GFGASLGSCLAE*YSPACPCLLSG Trigger: TCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR TCA 90 bp | GTAGAAGTGGCTGACCAGGTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACACTGGGCTACGGGGTTTaGCAACCACTTCCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VEVADQVGSQGLQLPSLTLGYGV*QPLPRP Trigger: GGGCCTGGGAAGTGGTTGTCAAACCCCGTAGCCCAG...TGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTACCTGGTCAGCCACTTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| 3UTR CAA 72 bp | AAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTTaGGGTCCTGAGGCTTGCAGGTTTCACAGGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: KLPCVGTCLPGP*GPEACRFHRSG Trigger: CCCGCTCCTGTGAAACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCGCTGACAGTGGGCTCTaGTGCACTGCTTTTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VWGQPWQLPGRVVFTCLSADSGL*CTAFCS Trigger: GCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTCAGC...GGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTAGGACTCAAGGGTGCTaGCCTCATGGGGCTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: TQVSTHISRVLWVLRLAGRTQGC*PHGAPL Trigger: TAGGGGAGCCCCATGAGGGCAGCACCCTTGAGTCCT...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR TCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCTTCAGCCCAGAAACCTaGTTCCTTCCTCTGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VWGQPWQLPGRVVFTCLSFSPET*FLPLSL Trigger: GAGGGACAGAGGAAGGAATCAGGTTTCTGGGCTGAA...GGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | GTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACAGCTTTATACAGGAGCAGCGAAAGGACTCAAGGGTaGTGCCCTCATGGGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGSQGLQLPSLTALYRSSERTQG*CPHGAP Trigger: GGGAGCCCCATGAGGGCAGCACCCTTGAGTCCTTTC...GCTGCTCCTGTATAAAGCTGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CCA 90 bp | GTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACAGCTTTATACAGGAGCAGCTCCTTGGGGTTAGGGTaGCTCACTGCCCAAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VGSQGLQLPSLTALYRSSSLGLG*LTAQAP Trigger: AGGGGCTTGGGCAGTGAGCCACCCTAACCCCAAGGA...GCTGCTCCTGTATAAAGCTGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGGAAGGGGCATTTGTGTTGGGAGAGCCAGGCAGTTGGCAGAACCCTGACAGTGGGCTCTGCTaGACTGCTTTTTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: REEEGAFVLGEPGSWQNPDSGLC*TAFCSR Trigger: CCTGCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTC...AGGGTTCTGCCAACTGCCTGGCTCTCCCAACACAAATGCCCCTTCCTCTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR GCA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTATTTGCCGCCTCACATaGGCTGCTGTCCCTTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: TQVSTHISRVLWVLRLAGICRLT*AAVPSY Trigger: GTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAAT...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR GCA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCAGGACTCAAGGGTGCTaGCCTCATGGGGCTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: HPWFQNQAQELRLAHTSPRTQGC*PHGAPL Trigger: TAGGGGAGCCCCATGAGGGCAGCACCCTTGAGTCCT...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCTAGAATCCTCTGCCTaGGTGACAACTTCATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGRQGLGPALAAAWQSCILESSA*VTTSFA Trigger: GGCAAATGAAGTTGTCACCCAGGCAGAGGATTCTAG...AATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CCA 90 bp | GTAGAAGTGGCTGACCAGGTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACACTTGTTCCCAGGCACTaGTGTCCTCTGCCCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: VEVADQVGSQGLQLPSLTLVPRH*CPLPKT Trigger: TGTCTTGGGCAGAGGACACCAGTGCCTGGGAACAAG...TGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTACCTGGTCAGCCACTTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR TCA 90 bp | GTTTGGTTATGGGTGGCAGATGGAGGATGGCACCTCGGCAAAGCTGCCAGGCCACTTCATCTTCCCTCCTaGACATCCTGCCTATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VWLWVADGGWHLGKAARPLHLPS*TSCLSP Trigger: AGGTGATAGGCAGGATGTTCAGGAGGGAAGATGAAG...TGGCCTGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGAGGAAGGGGCATTTGTGTTGGGAGAGCCAGGCAGTTGGCAGAACCCTTCGCCTCCGTTTCACTaGTGTCATCTCCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: REEEGAFVLGEPGSWQNPSPPFH*CHLLSC Trigger: ACAGGAGAGGAGATGACATCAGTGAAACGGAGGCGA...AGGGTTCTGCCAACTGCCTGGCTCTCCCAACACAAATGCCCCTTCCTCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTTCGCCTCCGTTTCACTaGTGTCATCTCCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVSTHISRVLWVLRLAGSPPFH*CHLLSC Trigger: ACAGGAGAGGAGATGACATCAGTGAAACGGAGGCGA...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTAATTCCTGGCTGTCCTaGGCCTCTATTTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVSTHISRVLWVLRLAGNSWLS*ASISLG Trigger: CCCCAAGGAAATAGAGGCTCAGGACAGCCAGGAATT...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCGTCTGGGCTGCCCCATaGTTTTGTCAAAGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWGQPWQLPGRVVFTCLSVWAAP*FCQSIS Trigger: AGAGATACTTTGACAAAATCATGGGGCAGCCCAGAC...GGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | GTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTTTGGGTCCGACACCTGCCATAACTaGATCAGCTCAGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKKETALCWHLPPGSFGSDTCHN*ISSVTS Trigger: GGAGGTCACTGAGCTGATGCAGTTATGGCAGGTGTC...GGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTTATGGGTGGCAGATGGAGGATGGCACCTCGGCAAAGCTGCCAGGCCACTCTCTAGAAGGCACTaGTTCTTTTCCCTCTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VWLWVADGGWHLGKAARPLSRRH*FFSLSD Trigger: GTCCGAGAGGGAAAAGAAGCAGTGCCTTCTAGAGAG...TGGCCTGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCACTAGTGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGGGTGCCTTACCCTaGCCCTGTTGCCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QALVSCQGVKKETALCWHLGALP*PCCPSA Trigger: TGCAGAAGGGCAACAGGGCCAGGGTAAGGCACCCAA...GTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACACTAGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | GCCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGATCCTGAAGACAGGCTaGATCCTGCGGCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APHTESSFCCSCLLTQNLILKTG*ILRPPL Trigger: GAGAGGAGGCCGCAGGATCCAGCCTGTCTTCAGGAT...CAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTAGGGTGCTGCCCTCATaGGGCTCCCCTAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSRVLPS*GSPRAV Trigger: CACAGCTCTAGGGGAGCCCCATGAGGGCAGCACCCT...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCATCAGCCTTGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCTGGGCTACGGGGTTTaGCAACCACTTCCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKSSALSTSMVPEPGSGTLGYGV*QPLPRP Trigger: GGGCCTGGGAAGTGGTTGTCAAACCCCGTAGCCCAG...AGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGGCTGATGACTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR TCA 90 bp | CCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCATCTGCACTGTGTGCTaGCAGTGGGCTCTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTHRVLFLLLLFAHTKPVICTVC*QWALLH Trigger: GTGCAGCAGAGCCCACTGTCAGCACACAGTGCAGAT...GACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | AGCTTTATACAGGAGCAGCTGATGGTGGGTAAGCACGTGATAGGGGAAGGGACTGTTAGGGTGGCTCACTaGCCAAGCCCCTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFIQEQLMVGKHVIGEGTVRVAH*PSPSLV Trigger: AACGAGAGAGGGGCTTGGGCAGTGAGCCACCCTAAC...AGTCCCTTCCCCTATCACGTGCTTACCCACCATCAGCTGCTCCTGTATAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CCTTGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACGTTAGGGTGGCTCACTaGCCAAGCCCCTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCQHPWFQNQAQELRLAHVRVAH*PSPSLV Trigger: AACGAGAGAGGGGCTTGGGCAGTGAGCCACCCTAAC...GTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCACTAGTGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACGCCCTGTTGCCCTTCTaGAACACTCATGTCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QALVSCQGVKKETALCWHALLPF*NTHVPC Trigger: ACAGGGGACATGAGTGTTGCAGAAGGGCAACAGGGC...GTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACACTAGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CATAGGCTCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGAAAGGACTCAAGGGTaGTGCCCTCATGGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLCSHRAFCYLKRSLTTERTQG*CPHGAP Trigger: GGGAGCCCCATGAGGGCAGCACCCTTGAGTCCTTTC...TGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGAGCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGTGGCTGACCAGGTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACAGAAGGCCAGTGGTCATaGAGACCTGAGATAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VEVADQVGSQGLQLPSLTEGQWS*RPEIRR Trigger: ACGTCTTATCTCAGGTCTCCATGACCACTGGCCTTC...TGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTACCTGGTCAGCCACTTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCCTTGTTCCCAGGCACTaGTGTCCTCTGCCCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPWFQNQAQELRLAHTSPLVPRH*CPLPKT Trigger: TGTCTTGGGCAGAGGACACCAGTGCCTGGGAACAAG...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| 3UTR CAA 72 bp | TGCCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGCTaGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLAELYSPACPC*LSGILQQPWTK Trigger: TTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | GCCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGCTAGTCCACAGTGCCTaGATGATTGACAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APHTESSFCCSCLLTQNLLVHSA*MIDRAE Trigger: CTCTGCCCTGTCAATCATGCAGGCACTGTGGACTAG...CAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCCCTCCACTACCACAGTaGTTTCCCACTCTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HPWFQNQAQELRLAHTSPPPLPQ*FPTLPR Trigger: ACGAGGAAGAGTGGGAAAGCACTGTGGTAGTGGAGG...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | ACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCATTTGCCGCCTCACATaGGCTGCTGTCCCTTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSMVPEPGSGTQVSTHISICRLT*AAVPSY Trigger: GTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAAT...GGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTGTTCCCCGACTCCTGTaGTCTAACATAAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQVSTHISRVLWVLRLAGVPRLL*SNIRFL Trigger: CAGAAACCTTATGTTAGAGCACAGGAGTCGGGGAAC...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGAGGAAGGGGCATTTGTGTTGGGAGAGCCAGGCAGTTGGCAGAACCCTAGTATCTCTGTTGCCTaGCACAGGAAGGAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: REEEGAFVLGEPGSWQNPSISVA*HRKEFL Trigger: CAGGAATTCCTTCCTGTGGCAGGCAACAGAGATACT...AGGGTTCTGCCAACTGCCTGGCTCTCCCAACACAAATGCCCCTTCCTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | ACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCGCCCTGTTGCCCTTCTaGAACACTCATGTCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSMVPEPGSGTQVSTHISALLPF*NTHVPC Trigger: ACAGGGGACATGAGTGTTGCAGAAGGGCAACAGGGC...GGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTGAAAGGACTCAAGGGTaGTGCCCTCATGGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAHTGPSAISRDHSLQCSERTQG*CPHGAP Trigger: GGGAGCCCCATGAGGGCAGCACCCTTGAGTCCTTTC...ACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTTCCTTGGGGTTAGGGTaGCTCACTGCCCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVSLGLG*LTAQAP Trigger: AGGGGCTTGGGCAGTGAGCCACCCTAACCCCAAGGA...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTTTGGGTGCCTTACCCTaGCCCTGTTGCCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSLGALP*PCCPSA Trigger: TGCAGAAGGGCAACAGGGCCAGGGTAAGGCACCCAA...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | CATAGGCTCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAATCCTGAAGACAGGCTaGATCCTGCGGCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRLCSHRAFCYLKRSLTTILKTG*ILRPPL Trigger: GAGAGGAGGCCGCAGGATCCAGCCTGTCTTCAGGAT...TGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGAGCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAAGGTGGGCACCCTTGCTaGTCTAAGAGGGAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLALWNSPAALDKREQNKGGHPC*SKRESF Trigger: AAAGCTCTCCCTCTTAGATCAGCAAGGGTGCCCACC...TTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAACTCTCCAATTCCTGGCTGTCCTaGGCCTCTATTTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWNSPAALDKREQNKLSNSWLS*ASISLG Trigger: CCCCAAGGAAATAGAGGCTCAGGACAGCCAGGAATT...GGAGAGTTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | ACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCTAGTCCACAGTGCCTaGATGATTGACAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSMVPEPGSGTQVSTHISLVHSA*MIDRAE Trigger: CTCTGCCCTGTCAATCATGCAGGCACTGTGGACTAG...GGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR GCA 90 bp | GCCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTGCTGCACTGCTTTTTaGAGCAGGGGCTCTAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: APHTESSFCCSCLLTQNLCCTAF*SRGSKR Trigger: ACGTTTAGAGCCCCTGCTGCAAAAAGCAGTGCAGCA...CAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | ACCCTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGAATTTGCCGCCTCACATaGGCTGCTGTCCCTTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLEMAFSVMSTCLVMGGRICRLT*AAVPSY Trigger: GTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAAT...TCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | GTAGGTAGTCAGGGCCTCCAGTTGCCCTCACTCACAGCTTTATACAGGAGCAGCGTTCCCCGACTCCTGTaGTCTAACATAAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGSQGLQLPSLTALYRSSVPRLL*SNIRFL Trigger: CAGAAACCTTATGTTAGAGCACAGGAGTCGGGGAAC...GCTGCTCCTGTATAAAGCTGTGAGTGAGGGCAACTGGAGGCCCTGACTACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CACTACAGTGTAGTTCTCCCTTATAGCATACACAGTCCAGGCACAGGGAATTGGGTTAGGGTGGCTCACTaGCCAAGCCCCTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HYSVVLPYSIHSPGTGNWVRVAH*PSPSLV Trigger: AACGAGAGAGGGGCTTGGGCAGTGAGCCACCCTAAC...CCAATTCCCTGTGCCTGGACTGTGTATGCTATAAGGGAGAACTACACTGTAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAACTCTCCCCTGTGCTGCTTCAGTaGCAGTGGGCATTCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALWNSPAALDKREQNKLSPVLLQ*QWAFLA Trigger: AGCTAAGAATGCCCACTGGCACTGAAGCAGCACAGG...GGAGAGTTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCACTAGTGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTCTTCTCCTGGGCCTaGAAAGGGACTGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QALVSCQGVKKETALCWHFFSWA*KGTARK Trigger: TTTTCTGGCAGTCCCTTTCCAGGCCCAGGAGAAGAA...GTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACACTAGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGCTTGCTCTCTGGAATTCTCCTGCTTCAGTGCCAGTaGGCATTCTTAGCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLAELYSPACPCLLSGILLLQCQ*AFLAQN Trigger: GTTCTGAGCTAAGAATGCCCACTGGCACTGAAGCAG...GAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTATCCTGAAGACAGGCTaGATCCTGCGGCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAHTGPSAISRDHSLQCSILKTG*ILRPPL Trigger: GAGAGGAGGCCGCAGGATCCAGCCTGTCTTCAGGAT...ACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGGTGGGCACCCTTGCTaGTCTAAGAGGGAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVGGHPC*SKRESF Trigger: AAAGCTCTCCCTCTTAGATCAGCAAGGGTGCCCACC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR TCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTTCGCCTCCGTTTCACTaGTGTCATCTCCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSSPPFH*CHLLSC Trigger: ACAGGAGAGGAGATGACATCAGTGAAACGGAGGCGA...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTTTCAGCCCAGAAACCTaGTTCCTTCCTCTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSFSPET*FLPLSL Trigger: GAGGGACAGAGGAAGGAATCAGGTTTCTGGGCTGAA...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | TCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCAATTCCTGGCTGTCCTaGGCCTCTATTTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STSMVPEPGSGTQVSTHINSWLS*ASISLG Trigger: CCCCAAGGAAATAGAGGCTCAGGACAGCCAGGAATT...GATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCCTGTCCTTATTTCCAAAGATGTaGTTTAGGGCTTTCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VWGQPWQLPGRVVFTCLSLFPKM*FRAFKH Trigger: GTGCTTGAAAGCCCTAAAGCACATCTTTGGAAATAA...GGACAGGCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCTCCCTTATGGGCTCTGCTGCACTaGTTTTTGCAGCAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGPSAISRDHSLQCSSPLWALLH*FLQQGL Trigger: GAGCCCCTGCTGCAAAAAGCAGTGCAGCAGAGCCCA...TAAGGGAGAACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTGCTGACAGTGGGCTCTaGTGCACTGCTTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAHTGPSAISRDHSLQCSADSGL*CTAFCS Trigger: GCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTCAGC...ACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR GCA 90 bp | CTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAACTCCCTCCACTACCACAGTaGTTTCCCACTCTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LALWNSPAALDKREQNKLPPLPQ*FPTLPR Trigger: ACGAGGAAGAGTGGGAAAGCACTGTGGTAGTGGAGG...GAGTTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCAGTATCTCTGTTGCCTaGCACAGGAAGGAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPWFQNQAQELRLAHTSPSISVA*HRKEFL Trigger: CAGGAATTCCTTCCTGTGGCAGGCAACAGAGATACT...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGCCCTGTTGCCCTTCTaGAACACTCATGTCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVALLPF*NTHVPC Trigger: ACAGGGGACATGAGTGTTGCAGAAGGGCAACAGGGC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | TCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCCCTGTGCTGCTTCAGTaGCAGTGGGCATTCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STSMVPEPGSGTQVSTHIPVLLQ*QWAFLA Trigger: AGCTAAGAATGCCCACTGGCACTGAAGCAGCACAGG...GATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACCTGCTTCAGTGCCAGTaGGCATTCTTAGCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCQHPWFQNQAQELRLAHLLQCQ*AFLAQN Trigger: GTTCTGAGCTAAGAATGCCCACTGGCACTGAAGCAG...GTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCTTGTTCCCAGGCACTaGTGTCCTCTGCCCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVLVPRH*CPLPKT Trigger: TGTCTTGGGCAGAGGACACCAGTGCCTGGGAACAAG...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR TCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCTTCATCTTCCCTCCTaGACATCCTGCCTATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSLHLPS*TSCLSP Trigger: AGGTGATAGGCAGGATGTTCAGGAGGGAAGATGAAG...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCATCAGCCTTGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTTTCAGCCCAGAAACCTaGTTCCTTCCTCTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSSALSTSMVPEPGSGTFSPET*FLPLSL Trigger: GAGGGACAGAGGAAGGAATCAGGTTTCTGGGCTGAA...AGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGGCTGATGACTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGGGCCTGGAAAGGGACTaGCAGAAAATACTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: APHTESSFCCSCLLTQNLGLERD*QKILSV Trigger: AACTGAAAGTATTTTCTGGCAGTCCCTTTCCAGGCC...CAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGACACCTGCCATAACTaGATCAGCTCAGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVDTCHN*ISSVTS Trigger: GGAGGTCACTGAGCTGATGCAGTTATGGCAGGTGTC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR GCA 90 bp | GCACGTGATAGGGGAAGGGACTCACTGGACAGCTGGGTCACTATGAGGTTAACAGTCAGATACCTTCTCTaGAGGTTTCTGAGAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ARDRGRDSLDSWVTMRLTVRYLL*RFLRRL Trigger: CAGTCTTCTCAGAAACCTGCAGAGAAGGTATCTGAC...TGTTAACCTCATAGTGACCCAGCTGTCCAGTGAGTCCCTTCCCCTATCACGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR GCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTTGCTGCACTGCTTTTTaGAGCAGGGGCTCTAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSCCTAF*SRGSKR Trigger: ACGTTTAGAGCCCCTGCTGCAAAAAGCAGTGCAGCA...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
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| CDS-3UTR CCA 90 bp | TCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTTCTTCTCCTGGGCCTaGAAAGGGACTGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STSMVPEPGSGTQVSTHIFFSWA*KGTARK Trigger: TTTTCTGGCAGTCCCTTTCCAGGCCCAGGAGAAGAA...GATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR CCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCTGCTTCAGTGCCAGTaGGCATTCTTAGCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSLLQCQ*AFLAQN Trigger: GTTCTGAGCTAAGAATGCCCACTGGCACTGAAGCAG...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTCTGGGCTGCCCCATaGTTTTGTCAAAGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLCSHRAFCYLKRSLTTVWAAP*FCQSIS Trigger: AGAGATACTTTGACAAAATCATGGGGCAGCCCAGAC...TGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGAGCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCTCCCTTACCTCCACTACCACAGTaGTTTCCCACTCTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TGPSAISRDHSLQCSSPLPPLPQ*FPTLPR Trigger: ACGAGGAAGAGTGGGAAAGCACTGTGGTAGTGGAGG...TAAGGGAGAACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR TCA 90 bp | CACTACAGTGTAGTTCTCCCTTATAGCATACACAGTCCAGGCACAGGGAATTGGGTCTGGGCTGCCCCATaGTTTTGTCAAAGTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYSVVLPYSIHSPGTGNWVWAAP*FCQSIS Trigger: AGAGATACTTTGACAAAATCATGGGGCAGCCCAGAC...CCAATTCCCTGTGCCTGGACTGTGTATGCTATAAGGGAGAACTACACTGTAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR GCA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTGGCCTGGAAAGGGACTaGCAGAAAATACTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHPWFQNQAQELRLAHTSGLERD*QKILSV Trigger: AACTGAAAGTATTTTCTGGCAGTCCCTTTCCAGGCC...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
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| CDS-3UTR GCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGTTCCCCGACTCCTGTaGTCTAACATAAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVVPRLL*SNIRFL Trigger: CAGAAACCTTATGTTAGAGCACAGGAGTCGGGGAAC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR GCA 90 bp | TCTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTAGTATCTCTGTTGCCTaGCACAGGAAGGAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAHTGPSAISRDHSLQCSSISVA*HRKEFL Trigger: CAGGAATTCCTTCCTGTGGCAGGCAACAGAGATACT...ACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCTCCCTTAGAAGGCCAGTGGTCATaGAGACCTGAGATAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: TGPSAISRDHSLQCSSPLEGQWS*RPEIRR Trigger: ACGTCTTATCTCAGGTCTCCATGACCACTGGCCTTC...TAAGGGAGAACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
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| CDS-3UTR CCA 90 bp | ATAGCATGCAACACCCCACCAACCCTAGAAAGTAAAATTATAAGTAATAACAGGAGGGTGCTGCCCTCATaGGGCTCCCCTAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IACNTPPTLESKIISNNRRVLPS*GSPRAV Trigger: CACAGCTCTAGGGGAGCCCCATGAGGGCAGCACCCT...CCTGTTATTACTTATAATTTTACTTTCTAGGGTTGGTGGGGTGTTGCATGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR GCA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGTCAGATACCTTCTCTaGAGGTTTCTGAGAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGLLLSQEITHYSVVVRYLL*RFLRRL Trigger: CAGTCTTCTCAGAAACCTGCAGAGAAGGTATCTGAC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
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| CDS-3UTR CCA 90 bp | ATAGCATGCAACACCCCACCAACCCTAGAAAGTAAAATTATAAGTAATAACAGGTTGGGTGCCTTACCCTaGCCCTGTTGCCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IACNTPPTLESKIISNNRLGALP*PCCPSA Trigger: TGCAGAAGGGCAACAGGGCCAGGGTAAGGCACCCAA...CCTGTTATTACTTATAATTTTACTTTCTAGGGTTGGTGGGGTGTTGCATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR GCA 90 bp | ATAGCATGCAACACCCCACCAACCCTAGAAAGTAAAATTATAAGTAATAACAGGGACAGTGGGCTCTGCTaGACTGCTTTTTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IACNTPPTLESKIISNNRDSGLC*TAFCSR Trigger: CCTGCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTC...CCTGTTATTACTTATAATTTTACTTTCTAGGGTTGGTGGGGTGTTGCATGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTCTCCCTTATTATTTCCAAAGATGTaGTTTAGGGCTTTCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGPSAISRDHSLQCSSPLLFPKM*FRAFKH Trigger: GTGCTTGAAAGCCCTAAAGCACATCTTTGGAAATAA...TAAGGGAGAACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS GCA 90 bp | CCTAGAATCCTCTGCCTGGGTGACAACTTCATTTGCCGCCTCACATaGGCTGCTGTCCCTTCGTACCTGCTCCTGCTCCTCCACTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRILCLGDNFICRLT*AAVPSYLLLLLHYH Trigger: GTGGTAGTGGAGGAGCAGGAGCAGGTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAATGAAGTTGTCACCCAGGCAGAGGATTCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS CCA 90 bp | TCCTCTCCTGTGGTCTGGGTGCTGACCTCCCTAGAATCCTCTGCCTaGGTGACAACTTCATTTGCCGCCTCACATGCGCTGCTGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPVVWVLTSLESSA*VTTSFAASHALLSL Trigger: AAGGGACAGCAGCGCATGTGAGGCGGCAAATGAAGTTGTCACCCAGGCAGAGGATTCTAGGGAGGTCAGCACCCAGACCACAGGAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 90 bp | ACAACTTCATTTGCCGCCTCACATGCGCTGCTGTCCCTTCGTACCTaGTCCTGCTCCTCCACTACCACAGTGCTTTCCCACTCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TTSFAASHALLSLRT*SCSSTTTVLSHSSS Trigger: CGAGGAAGAGTGGGAAAGCACTGTGGTAGTGGAGGAGCAGGAGCAGGTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAATGAAGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTGGCTGCCCCATGATTTaGTCAAAGTATCTCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRQGLGPALAAAWQSCIGCPMI*SKYLCC Trigger: GCAACAGAGATACTTTGACAAAATCATGGGGCAGCC...AATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTATGTCCCCTGTTCCTTaGTCTGGGCTGCCCCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TQVSTHISRVLWVLRLAGMSPVP*SGLPHD Trigger: ATCATGGGGCAGCCCAGACAAAGGAACAGGGGACAT...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTCTTACCCTGGCCCTGTaGCCCTTCTGCAACACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQVSTHISRVLWVLRLAGLTLAL*PFCNTH Trigger: ATGAGTGTTGCAGAAGGGCAACAGGGCCAGGGTAAG...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS GCA 90 bp | AAGACAACCCTGTGGCAGGCTCCTCCACACCCTGTGCTGCTTCAGTaGCAGTGGGCATTCTTAGCTCAGAACACCCATCCTCACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTTLWQAPPHPVLLQ*QWAFLAQNTHPHHL Trigger: AAGATGGTGAGGATGGGTGTTCTGAGCTAAGAATGCCCACTGGCACTGAAGCAGCACAGGGTGTGGAGGAGCCTGCCACAGGGTTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTATCCTGCCTATCACCTaGTATGCACACAAGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TQVSTHISRVLWVLRLAGILPIT*YAHKGG Trigger: ACCTCCCTTGTGTGCATACAAGGTGATAGGCAGGAT...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTGGCAGAGTTGTATTCACCTGCCTGTCCCTGCTTGCTCTCTGGAATTCTCATGTCCCCTGTTCCTTaGTCTGGGCTGCCCCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLAELYSPACPCLLSGILMSPVP*SGLPHD Trigger: ATCATGGGGCAGCCCAGACAAAGGAACAGGGGACAT...GAGAATTCCAGAGAGCAAGCAGGGACAGGCAGGTGAATACAACTCTGCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CAA 90 bp | GCCCCACACACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGCTTACCCTGGCCCTGTaGCCCTTCTGCAACACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: APHTESSFCCSCLLTQNLLTLAL*PFCNTH Trigger: ATGAGTGTTGCAGAAGGGCAACAGGGCCAGGGTAAG...CAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGTGTGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CAA 90 bp | CACTCCCAGGCTCTCAGGCCAGCTGAGGGCATTAACCCTGTGGTGCCATGTGCCGGAATTTGTTCTTGCTaGTTGGGATCATTTCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSQALRPAEGINPVVPCAGICSC*LGSFLA Trigger: AGCTAGAAATGATCCCAACAAGCAAGAACAAATTCC...GGCACATGGCACCACAGGGTTAATGCCCTCAGCTGGCCTGAGAGCCTGGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS GCA 90 bp | GGTAAGCCTTCTTTCAGAGCATCATTTATCGCAGCCTCAGTGTACTaGACGGGGATGCCCACAATGAGCACAGCCTTCTTGGGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKPSFRASFIAASVY*TGMPTMSTAFLGSR Trigger: TCTGGATCCCAAGAAGGCTGTGCTCATTGTGGGCATCCCCGTGCAGTACACTGAGGCTGCGATAAATGATGCTCTGAAAGAAGGCTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
||
| CDS GCA 90 bp | TCATTTCTAGCTAGTAAGAAGTTGGGTGCCTTACCCTGGCCCTGTTaGCCTTCTGCAACACTCATGTCCCCTGTTCCTTTGTCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLASKKLGALPWPC*PSATLMSPVPLSGL Trigger: CAGCCCAGACAAAGGAACAGGGGACATGAGTGTTGCAGAAGGGCAACAGGGCCAGGGTAAGGCACCCAACTTCTTACTAGCTAGAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCACTAGTGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACCTAAACCCCAGGGCTTaGGCCACATCTACTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QALVSCQGVKKETALCWHLNPRA*ATSTIL Trigger: GAGAATAGTAGATGTGGCCAAAGCCCTGGGGTTTAG...GTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACACTAGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
||
| CDS-3UTR CAA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCCTAAACCCCAGGGCTTaGGCCACATCTACTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPWFQNQAQELRLAHTSPLNPRA*ATSTIL Trigger: GAGAATAGTAGATGTGGCCAAAGCCCTGGGGTTTAG...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114540.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTGAGACTTCAAGCCTTTaGGTTTGTCTTGGTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLVLALASRVLWVLRLAGETSSL*VCLGLN Trigger: ATTTAGACCAAGACAAACCAAAAGGCTTGAAGTCTC...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CAA 90 bp | CAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCTTACCCTGGCCCTGTaGCCCTTCTGCAACACTCAT | + |
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Preference number: 5 (lower is better) Translates to: QHPWFQNQAQELRLAHTSLTLAL*PFCNTH Trigger: ATGAGTGTTGCAGAAGGGCAACAGGGCCAGGGTAAG...AGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS TCA 90 bp | TCTAAGAGGGAGAGCTTTCCCCGAAGGCCAGTGGTCATGGAGACCTaGGATAAGACGTGCTTGAGACGAATTGAATCTGCACTGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SKRESFPRRPVVMET*DKTCLRRIESALCA Trigger: AGCACACAGTGCAGATTCAATTCGTCTCAAGCACGTCTTATCTCAGGTCTCCATGACCACTGGCCTTCGGGGAAAGCTCTCCCTCTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS-3UTR CAA 90 bp | CTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAACTCTCCCATCCTGCCTATCACCTaGTATGCACACAAGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LSGILQQPWTKESRTNSPILPIT*YAHKGG Trigger: ACCTCCCTTGTGTGCATACAAGGTGATAGGCAGGAT...GGGAGAGTTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CAA 90 bp | CATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCTCCCGGCTGCCCCATGATTTaGTCAAAGTATCTCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: HPWFQNQAQELRLAHTSPGCPMI*SKYLCC Trigger: GCAACAGAGATACTTTGACAAAATCATGGGGCAGCC...GGGAGATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGTCATCAGCCTTGTCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTATGTCCCCTGTTCCTTaGTCTGGGCTGCCCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: LKSSALSTSMVPEPGSGTMSPVP*SGLPHD Trigger: ATCATGGGGCAGCCCAGACAAAGGAACAGGGGACAT...AGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGACAAGGCTGATGACTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS TCA 90 bp | CGAGTAAGTTTCATTAATTCCAGAAAAGTAGGTGGGCACCCTTGCTaGTCTAAGAGGGAGAGCTTTCCCCGAAGGCCAGTGGTCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: RVSFINSRKVGGHPC*SKRESFPRRPVVME Trigger: CTCCATGACCACTGGCCTTCGGGGAAAGCTCTCCCTCTTAGATCAGCAAGGGTGCCCACCTACTTTTCTGGAATTAATGAAACTTACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS-3UTR CAA 90 bp | ACTCAGGTTAGCACACACATCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTGGAATTTGTTCTTGCTaGTTGGGATCATTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: TQVSTHISRVLWVLRLAGGICSC*LGSFLA Trigger: AGCTAGAAATGATCCCAACAAGCAAGAACAAATTCC...ACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGATGTGTGTGCTAACCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGGCTGCCCCATGATTTaGTCAAAGTATCTCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LLTQGLLLSQEITHYSVVGCPMI*SKYLCC Trigger: GCAACAGAGATACTTTGACAAAATCATGGGGCAGCC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAACAAACTCTCCCGTGTGGAATTTGTTCTaGCTTGTTGGGATCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LSGILQQPWTKESRTNSPVWNLF*LVGIIS Trigger: AGAAATGATCCCAACAAGCAAGAACAAATTCCACAC...GGGAGAGTTTGTTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051569.7 |
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| CDS-3UTR CAA 90 bp | TCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCGGAATTTGTTCTTGCTaGTTGGGATCATTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: STSMVPEPGSGTQVSTHIGICSC*LGSFLA Trigger: AGCTAGAAATGATCCCAACAAGCAAGAACAAATTCC...GATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CAA 90 bp | TCAACATCCATGGTTCCAGAACCAGGCTCAGGAACTCAGGTTAGCACACACATCGTGTGGAATTTGTTCTaGCTTGTTGGGATCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: STSMVPEPGSGTQVSTHIVWNLF*LVGIIS Trigger: AGAAATGATCCCAACAAGCAAGAACAAATTCCACAC...GATGTGTGTGCTAACCTGAGTTCCTGAGCCTGGTTCTGGAACCATGGATGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCACACAGGGCCTTCTGCTATCTCAAGAGATCACTCACTACAGTGTAGTTGTGTGGAATTTGTTCTaGCTTGTTGGGATCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLTQGLLLSQEITHYSVVVWNLF*LVGIIS Trigger: AGAAATGATCCCAACAAGCAAGAACAAATTCCACAC...AACTACACTGTAGTGAGTGATCTCTTGAGATAGCAGAAGGCCCTGTGTGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS CCA 90 bp | CATGTGCTATTATTACACAGAGACTTCAAGCCTTTTGGTTTGTCTTaGTCTAAATTCTTTAACTCTATTTTCCCTGTAGGAACAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: HVLLLHRDFKPFGLS*SKFFNSIFPVGTVL Trigger: TAGCACTGTTCCTACAGGGAAAATAGAGTTAAAGAATTTAGACCAAGACAAACCAAAAGGCTTGAAGTCTCTGTGTAATAATAGCACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS CCA 72 bp | CCCAGGCACTGGTGTCCTCTGCCCAAGACAACCCTGTaGCAGGCTCCTCCACACCCTGTGCTGCTTCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: PRHWCPLPKTTL*QAPPHPVLLQC Trigger: GCACTGAAGCAGCACAGGGTGTGGAGGAGCCTGCCACAGGGTTGTCTTGGGCAGAGGACACCAGTGCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | TTTGCCGCCTCACATGCGCTGCTGTCCCTTCGTACCTaGTCCTGCTCCTCCACTACCACAGTGCTTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: FAASHALLSLRT*SCSSTTTVLSH Trigger: GTGGGAAAGCACTGTGGTAGTGGAGGAGCAGGAGCAGGTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | CTCTGCCTGGGTGACAACTTCATTTGCCGCCTCACATaGGCTGCTGTCCCTTCGTACCTGCTCCTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LCLGDNFICRLT*AAVPSYLLLLL Trigger: GAGGAGCAGGAGCAGGTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAATGAAGTTGTCACCCAGGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS TCA 72 bp | TCGCAGCCTCAGTGTACTGCACGGGGATGCCCACAATaGGCACAGCCTTCTTGGGATCCAGATCCATCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SQPQCTARGCPQ*AQPSWDPDPSP Trigger: AGGGGATGGATCTGGATCCCAAGAAGGCTGTGCTCATTGTGGGCATCCCCGTGCAGTACACTGAGGCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS TCA 72 bp | AGCACTGTGTCTCCAGAGCAGTCGCCTCCGTTTCACTaGTGTCATCTCCTCTCCTGTGGTCTGGGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: STVSPEQSPPFH*CHLLSCGLGAD Trigger: GTCAGCACCCAGACCACAGGAGAGGAGATGACATCAGTGAAACGGAGGCGACTGCTCTGGAGACACAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | CTCCCTAGAATCCTCTGCCTGGGTGACAACTTCATTTaGCGCCTCACATGCGCTGCTGTCCCTTCGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: LPRILCLGDNFI*RLTCAAVPSYL Trigger: CAGGTACGAAGGGACAGCAGCGCATGTGAGGCGGCAAATGAAGTTGTCACCCAGGCAGAGGATTCTAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | GAAGTTGGGTGCCTTACCCTGGCCCTGTTGCCCTTCTaGAACACTCATGTCCCCTGTTCCTTTGTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EVGCLTLALLPF*NTHVPCSFVWA Trigger: AGCCCAGACAAAGGAACAGGGGACATGAGTGTTGCAGAAGGGCAACAGGGCCAGGGTAAGGCACCCAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS CCA 72 bp | CTCCGTTTCACTGATGTCATCTCCTCTCCTGTGGTCTaGGTGCTGACCTCCCTAGAATCCTCTGCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRFTDVISSPVV*VLTSLESSAWV Trigger: CACCCAGGCAGAGGATTCTAGGGAGGTCAGCACCCAGACCACAGGAGAGGAGATGACATCAGTGAAACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS TCA 72 bp | CTGTTGCCTGCCACAGGAAGGAATTCCTGGCTGTCCTaGGCCTCTATTTCCTTGGGGTTAGGGTGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: LLPATGRNSWLS*ASISLGLGWLT Trigger: AGTGAGCCACCCTAACCCCAAGGAAATAGAGGCTCAGGACAGCCAGGAATTCCTTCCTGTGGCAGGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | ATTGAATCTGCACTGTGTGCTGACAGTGGGCTCTGCTaGACTGCTTTTTGCAGCAGGGGCTCTAAACGTAGC | + |
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Preference number: 6 (lower is better) Translates to: IESALCADSGLC*TAFCSRGSKRS Trigger: GCTACGTTTAGAGCCCCTGCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTCAGCACACAGTGCAGATTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS GCA 72 bp | CGAATTGAATCTGCACTGTGTGCTGACAGTGGGCTCTaGTGCACTGCTTTTTGCAGCAGGGGCTCTAAACGT | + |
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Preference number: 6 (lower is better) Translates to: RIESALCADSGL*CTAFCSRGSKR Trigger: ACGTTTAGAGCCCCTGCTGCAAAAAGCAGTGCAGCAGAGCCCACTGTCAGCACACAGTGCAGATTCAATTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS TCA 72 bp | CCCTCTCGGACACCTGCCATAACTGCATCAGCTCAGTaGCCTCCTCTAACCAGGTTTCAAAGCTTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PSRTPAITASAQ*PPLTRFQSFLL Trigger: GAGAAGAAAGCTTTGAAACCTGGTTAGAGGAGGTCACTGAGCTGATGCAGTTATGGCAGGTGTCCGAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS TCA 72 bp | CTGACACTCCCCACGGTCCTGCCATTTGGTAGTCACTaGGCTGTGTGGAATTTGTTCTTGCTTGTTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: LTLPTVLPFGSH*AVWNLFLLVGI Trigger: GATCCCAACAAGCAAGAACAAATTCCACACAGCTCAGTGACTACCAAATGGCAGGACCGTGGGGAGTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | TCTTTCAGAGCATCATTTATCGCAGCCTCAGTGTACTaGACGGGGATGCCCACAATGAGCACAGCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFRASFIAASVY*TGMPTMSTAFL Trigger: CAAGAAGGCTGTGCTCATTGTGGGCATCCCCGTGCAGTACACTGAGGCTGCGATAAATGATGCTCTGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS GCA 72 bp | TCTAGAAGGCACTGCTTCTTTTCCCTCTCGGACACCTaGCATAACTGCATCAGCTCAGTGACCTCCTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: SRRHCFFSLSDT*HNCISSVTSSN Trigger: GTTAGAGGAGGTCACTGAGCTGATGCAGTTATGGCAGGTGTCCGAGAGGGAAAAGAAGCAGTGCCTTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS CAA 72 bp | AACTTATTCATAAACTCATCATCTGGGCTACGGGGTTaGACAACCACTTCCCAGGCCCCACCCTCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: NLFINSSSGLRG*TTTSQAPPSAG Trigger: ACCAGCAGAGGGTGGGGCCTGGGAAGTGGTTGTCAAACCCCGTAGCCCAGATGATGAGTTTATGAATAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS TCA 72 bp | TTCATTAATTCCAGAAAAGTAGGTGGGCACCCTTGCTaGTCTAAGAGGGAGAGCTTTCCCCGAAGGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FINSRKVGGHPC*SKRESFPRRPV Trigger: CACTGGCCTTCGGGGAAAGCTCTCCCTCTTAGATCAGCAAGGGTGCCCACCTACTTTTCTGGAATTAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS CCA 72 bp | GGGTTTGACAACCACTTCCCAGGCCCCACCCTCTGCTaGTATATGAGTAGGCATCATAGTATAATCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: GFDNHFPGPTLC*YMSRHHSIINN Trigger: GTTGTTGATTATACTATGATGCCTACTCATATACCAGCAGAGGGTGGGGCCTGGGAAGTGGTTGTCAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS CAA 72 bp | ATTTTCCCTGTAGGAACAGTGCTAAACCCCAGGGCTTaGGCCACATCTACTATTCTCCGTCCTTCATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: IFPVGTVLNPRA*ATSTILRPSSL Trigger: AAGAGATGAAGGACGGAGAATAGTAGATGTGGCCAAAGCCCTGGGGTTTAGCACTGTTCCTACAGGGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS GCA 72 bp | TGTAAGACCTTAGAGTCCTCTTTATTTCCAAAGATGTaGTTTAGGGCTTTCAAGCACTGCTCCACGGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: CKTLESSLFPKM*FRAFKHCSTVR Trigger: CCTAACCGTGGAGCAGTGCTTGAAAGCCCTAAAGCACATCTTTGGAAATAAAGAGGACTCTAAGGTCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 |
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| CDS CAA 72 bp | GTAGTCACTGAGCTGTGTGGAATTTGTTCTTGCTTGTaGGGATCATTTCTAGCTAGTAAGAAGTTGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VVTELCGICSCL*GSFLASKKLGA Trigger: GGCACCCAACTTCTTACTAGCTAGAAATGATCCCAACAAGCAAGAACAAATTCCACACAGCTCAGTGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS CAA 72 bp | TTGGTAGTCACTGAGCTGTGTGGAATTTGTTCTTGCTaGTTGGGATCATTTCTAGCTAGTAAGAAGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LVVTELCGICSC*LGSFLASKKLG Trigger: ACCCAACTTCTTACTAGCTAGAAATGATCCCAACAAGCAAGAACAAATTCCACACAGCTCAGTGACTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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| CDS GCA 72 bp | CATTTGGTAGTCACTGAGCTGTGTGGAATTTGTTCTTaGTTGTTGGGATCATTTCTAGCTAGTAAGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: HLVVTELCGICS*LLGSFLASKKL Trigger: CAACTTCTTACTAGCTAGAAATGATCCCAACAAGCAAGAACAAATTCCACACAGCTCAGTGACTACCAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051569.7 ENSMUST00000114540.4 ENSMUST00000152209.2 |
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