Pregenerated sensors for PNMA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046287Ensembl transcript IDs: ENSMUST00000060418.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGCCAGGCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTaGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SCQATLQVGRVWGQP*QLPGRVVFTWLSLL Trigger: AAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGCCTGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | CACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTaGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: HPPGRQGLGPALAAA*QSCIHLAVPACSLE Trigger: TTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | ACCTCTCCACAGCCACTGGAAGCACCAGGTTCTGGGCCACCCTCCTaGAGCTTCGCAGATGGGCCTTGTCTGCCCACCACCATGGAATCC | + |
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Preference number: 1 (lower is better) Translates to: TSPQPLEAPGSGPPS*SFADGPCLPTTMES Trigger: GGATTCCATGGTGGTGGGCAGACAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGTGGCTGTGGAGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | TTAGCAGCACAGGACCTCTCCACAGCCACTGGAAGCACCAGGTTCTaGGCCACCCTCCTGGAGCTTCGCAGATGGGCCTTGTCTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LAAQDLSTATGSTRF*ATLLELRRWALSAH Trigger: GTGGGCAGACAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGTGGCTGTGGAGAGGTCCTGTGCTGCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | GTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTaGCTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: VWGQPWQLPGRVVFT*LSLLALWNSPAALD Trigger: GTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | AGGCCAGCTGAGGGCATTAACCCTGTGGTGCCATGTGCCCCAGCCTaGGGCTTTTCTCAGGCACTAGTGTCCTGTCAGGGTGTCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RPAEGINPVVPCAPA*GFSQALVSCQGVKK Trigger: CTTCTTGACACCCTGACAGGACACTAGTGCCTGAGAAAAGCCCCAGGCTGGGGCACATGGCACCACAGGGTTAATGCCCTCAGCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | ATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGATaGAGGATGGCACCTCGGCAAAGCTGCCAGGCCACCCTCCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: MAFSVMSTCLVMGGR*RMAPRQSCQATLQV Trigger: GACCTGGAGGGTGGCCTGGCAGCTTTGCCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | ACTGGAAGCACCAGGTTCTGGGCCACCCTCCTGGAGCTTCGCAGATaGGCCTTGTCTGCCCACCACCATGGAATCCCTCTGCTATTTTTC | + |
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Preference number: 1 (lower is better) Translates to: TGSTRFWATLLELRR*ALSAHHHGIPLLFF Trigger: GAAAAATAGCAGAGGGATTCCATGGTGGTGGGCAGACAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 90 bp | TGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTaGCTCCCGGGTCCTTTGGGTCCTGAGGCTTGCAGGTTTCACAGG | + |
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Preference number: 1 (lower is better) Translates to: CPVRVSRRKLPCVGT*LPGPLGPEACRFHR Trigger: CCTGTGAAACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 90 bp | ACAACAGGAGGGGATCAGCACAGCCCAGTCCCCAGGCCCTACCCATaGCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAG | + |
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Preference number: 1 (lower is better) Translates to: TTGGDQHSPVPRPYP*PVQVFLSQTEINRK Trigger: CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGGCCTGGGGACTGGGCTGTGCTGATCCCCTCCTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 90 bp | TTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTaGTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LAAAWQSCIHLAVPA*SLEFSSSPGQKRAE Trigger: TTCTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 90 bp | CGTAAGATGAGCATCAGCCAGTCTCTTGTCAACATCCATGGTTCCTaGTGGCTTCCAGACGGAGCTCAGGAACTCCGGGGAGCATCTGAT | + |
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Preference number: 1 (lower is better) Translates to: RKMSISQSLVNIHGS*WLPDGAQELRGASD Trigger: ATCAGATGCTCCCCGGAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGACTGGCTGATGCTCATCTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 90 bp | AAGATGAGCATCAGCCAGTCTCTTGTCAACATCCATGGTTCCTGCTaGCTTCCAGACGGAGCTCAGGAACTCCGGGGAGCATCTGATCAG | + |
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Preference number: 1 (lower is better) Translates to: KMSISQSLVNIHGSC*LPDGAQELRGASDQ Trigger: CTGATCAGATGCTCCCCGGAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGACTGGCTGATGCTCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR TCA 90 bp | GCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGATaGGCATCAGCCAGTCTCTTGTCAACATCCATGGTTCCTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: AQFRSSCPRLKSIVR*ASASLLSTSMVPAG Trigger: GCCAGCAGGAACCATGGATGTTGACAAGAGACTGGCTGATGCTCATCTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR TCA 90 bp | CTTCCTTCTCTGGTGAATCTTAGAGGTCTTGCGTGTGGTCATTATTaGGTTGAATGCAATGGATTTTTGTTTGTTAGAATTTTCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LPSLVNLRGLACGHY*VECNGFLFVRIFSS Trigger: GCTGGAGAAAATTCTAACAAACAAAAATCCATTGCATTCAACTCAATAATGACCACACGCAAGACCTCTAAGATTCACCAGAGAAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CAA 90 bp | AGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTaGTATTCACCTGGCTGTCCCTGCTTGCTCTCTGGAATTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RSAGFGASLGSCLAE*YSPGCPCLLSGILQ Trigger: CTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGCTTGTTCCCAGGCACTaGTGTCCTCTGCCCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: RQGLGPALAAAWQSCIHLLVPRH*CPLPKT Trigger: TGTCTTGGGCAGAGGACACCAGTGCCTGGGAACAAG...CAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTAGGGTGCTGCCCTCATaGGGCTCCCCTAGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VRVSRRKLPCVGTCLPGPRVLPS*GSPRAV Trigger: CACAGCTCTAGGGGAGCCCCATGAGGGCAGCACCCT...AGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCGAAAGGACTCAAGGGTaGTGCCCTCATGGGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGCQEGNCLVLALASRVERTQG*CPHGAP Trigger: GGGAGCCCCATGAGGGCAGCACCCTTGAGTCCTTTC...GACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTTGCCTTCACTTTGCTaGCACCCCCATCTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RVWGQPWQLPGRVVFTWLLPSLC*HPHLSS Trigger: AGAACTCAGATGGGGGTGTCAGCAAAGTGAAGGCAA...CAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGGGGTCCTTTGGGTCCTaGGGCTTGCAGGTTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: LSLLALWNSPAALDKREQGSFGS*GLQVSQ Trigger: CTGTGAAACCTGCAAGCCTCAGGACCCAAAGGACCC...CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGCCCTGTGGTGCCATGTaGCCCAGCCTGGGGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PYPCPVQVFLSQTEINRKPCGAM*PSLGLF Trigger: GAAAAGCCCCAGGCTGGGGCACATGGCACCACAGGG...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGCCATGTGCCCCAGCCTaGGGCTTTTCTCAGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: LSLLALWNSPAALDKREQPCAPA*GFSQAL Trigger: TAGTGCCTGAGAAAAGCCCCAGGCTGGGGCACATGG...CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCGCCTTGACTTCTGACTaGTTACATTGCCCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSGCQEGNCLVLALASRVALTSD*LHCPCA Trigger: GGCACAGGGGCAATGTAATCAGTCAGAAGTCAAGGC...GACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACAAGGGATTACCACTGTAGGGTGGCCTTGCCCTATTCTGGCACAGGATTGGTGGGTAAGCACGTaGTGGGGGAAGGGACTCACT | + |
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Preference number: 2 (lower is better) Translates to: LSQGITTVGWPCPILAQDWWVST*WGKGLT Trigger: AGTGAGTCCCTTCCCCCATCACGTGCTTACCCACCA...ATCCTGTGCCAGAATAGGGCAAGGCCACCCTACAGTGGTAATCCCTTGTGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGAGGACTCAAGGGTGCTaGCCTCATGGGGCTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: PYPCPVQVFLSQTEINRKRTQGC*PHGAPL Trigger: TAGGGGAGCCCCATGAGGGCAGCACCCTTGAGTCCT...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGACAGAGTCCTCTTTCTaGTGCTCCTGTTTGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: RVWGQPWQLPGRVVFTWLTESSF*CSCLLT Trigger: TGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGT...CAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTGTCAACATCCATGGTTCCTGCTGGCTTCCAGACGGAGCTCAGGAACTCGTCAGGGCCTCCAGTTaGCCTCACTCACAGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SLVNIHGSCWLPDGAQELVRASS*PHSQLY Trigger: ATAAAGCTGTGAGTGAGGGCAACTGGAGGCCCTGAC...GAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGATGGATCCTGAAGACAGGCTaGATCCTGCGGCCTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LEMAFSVMSTCLVMGGRWILKTG*ILRPPL Trigger: GAGAGGAGGCCGCAGGATCCAGCCTGTCTTCAGGAT...CCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGTGTCAAGAAGGAAACTaGCTTGTGTTGGCACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSLLALWNSPAALDKREQCQEGN*LVLALA Trigger: GGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACA...CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGAGAATTTTCTCCAGCTaGTATTGGCTTAGGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSLLALWNSPAALDKREQRIFSS*YWLRGL Trigger: AAGGCCCCTAAGCCAATACCAGCTGGAGAAAATTCT...CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCCTGCACACTCCCATCTGAGTTCTTGTaGCCCCACACATCTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: ESSFCCSCLLTQNLSCTLPSEFL*PHTSVA Trigger: TGCTACAGATGTGTGGGGCCACAAGAACTCAGATGG...GAGTGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGTCTTGTCAACATCCATaGTTCCTGCTGGCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PYPCPVQVFLSQTEINRKSCQHP*FLLASR Trigger: TCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGA...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCCTGCACACACCCCATATGGACTTaGAGTTGCCTTCACTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TESSFCCSCLLTQNLSCTHPIWT*SCLHFA Trigger: AGCAAAGTGAAGGCAACTTCAAGTCCATATGGGGTG...TGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGATGGGCGTGTGGTCATTATTaGGTTGAATGCAATGGATTT | + |
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Preference number: 2 (lower is better) Translates to: LEMAFSVMSTCLVMGGRWACGHY*VECNGF Trigger: AAATCCATTGCATTCAACTCAATAATGACCACACGC...CCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | GCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTaGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ATLQVGRVWGQP*QLPGRVVFTWL Trigger: CAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | CAGCCACTGGAAGCACCAGGTTCTGGGCCACCCTCCTaGAGCTTCGCAGATGGGCCTTGTCTGCCCACCACC | + |
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Preference number: 3 (lower is better) Translates to: QPLEAPGSGPPS*SFADGPCLPTT Trigger: GGTGGTGGGCAGACAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGTGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 72 bp | TCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTaGCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SRSAGFGASLGS*LAELYSPGCPC Trigger: GCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | GGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTaGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GRQGLGPALAAA*QSCIHLAVPAC Trigger: GCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | CAGGACCTCTCCACAGCCACTGGAAGCACCAGGTTCTaGGCCACCCTCCTGGAGCTTCGCAGATGGGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: QDLSTATGSTRF*ATLLELRRWAL Trigger: CAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGTGGCTGTGGAGAGGTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | ACCAGGTTCTGGGCCACCCTCCTGGAGCTTCGCAGATaGGCCTTGTCTGCCCACCACCATGGAATCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TRFWATLLELRR*ALSAHHHGIPL Trigger: CAGAGGGATTCCATGGTGGTGGGCAGACAAGGCCCATCTGCGAAGCTCCAGGAGGGTGGCCCAGAACCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | GAAGGGGTTAGCAGCACAGGACCTCTCCACAGCCACTaGAAGCACCAGGTTCTGGGCCACCCTCCTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: EGVSSTGPLHSH*KHQVLGHPPGA Trigger: AGCTCCAGGAGGGTGGCCCAGAACCTGGTGCTTCCAGTGGCTGTGGAGAGGTCCTGTGCTGCTAACCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGAAGTTGCCTTCACTTaGCTGACACCCCCATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TLQVGRVWGQPWQLPGRVEVAFT*LTPPSE Trigger: CTCAGATGGGGGTGTCAGCAAAGTGAAGGCAACTTC...AACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 72 bp | AGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTaGTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: SCLAELYSPGCP*LLSGILQQPWT Trigger: TGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR CCA 72 bp | GGAGCTTCGCAGATGGGCCTTGTCTGCCCACCACCATaGAATCCCTCTGCTATTTTTCCCTTCCCAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: GASQMGLVCPPP*NPSAIFPFPKA Trigger: GGCCTTTGGGAAGGGAAAAATAGCAGAGGGATTCCATGGTGGTGGGCAGACAAGGCCCATCTGCGAAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 72 bp | GCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTaGTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: AWQSCIHLAVPA*SLEFSSSPGQK Trigger: CTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR GCA 72 bp | GATGGGCCTTGTCTGCCCACCACCATGGAATCCCTCTaGTATTTTTCCCTTCCCAAAGGCCCAAGAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: DGPCLPTTMESL*YFSLPKGPRAT Trigger: GGTAGCTCTTGGGCCTTTGGGAAGGGAAAAATAGCAGAGGGATTCCATGGTGGTGGGCAGACAAGGCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| 3UTR-3UTR CAA 90 bp | GTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTACACCCCATATGGACTaGAAGTTGCCTTCACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRVSRRKLPCVGTCLPGPTPHMD*KLPSLC Trigger: GCAAAGTGAAGGCAACTTCAAGTCCATATGGGGTGT...AGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CCA 72 bp | AGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTaGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVVFTWLSLLAL*NSPAALDKREQ Trigger: CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR TCA 72 bp | CCAGCTGGTATTGGCTTAGGGGCCTTGACTTCTGACTaGTTACATTGCCCCTGTGCCTTTCTAAGGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PAGIGLGALTSD*LHCPCAFLRFS Trigger: AGAGAACCTTAGAAAGGCACAGGGGCAATGTAATCAGTCAGAAGTCAAGGCCCCTAAGCCAATACCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR TCA 72 bp | TTCTCCAGCTGGTATTGGCTTAGGGGCCTTGACTTCTaGCTGATTACATTGCCCCTGTGCCTTTCTAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSSWYWLRGLDF*LITLPLCLSKV Trigger: AACCTTAGAAAGGCACAGGGGCAATGTAATCAGTCAGAAGTCAAGGCCCCTAAGCCAATACCAGCTGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR TCA 72 bp | CTGGTGAATCTTAGAGGTCTTGCGTGTGGTCATTATTaGGTTGAATGCAATGGATTTTTGTTTGTTAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LVNLRGLACGHY*VECNGFLFVRI Trigger: AATTCTAACAAACAAAAATCCATTGCATTCAACTCAATAATGACCACACGCAAGACCTCTAAGATTCACCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | GGCCACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTaGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPPGRQGLGPA*AAAWQSCIHLA Trigger: AGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTTGGCCTCTCCTCCTGTaGCGGCGGCGGCGGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSCLAELYSPGCPCLLSWPLLL*RRRREP Trigger: GGGTTCCCGCCGCCGCCGCCACAGGAGGAGAGGCCA...AGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTCTTGGGCTTGGGATaGCTCTTCTCCCAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLQVGRVWGQPWQLPGRVVLGLG*LFSQAQ Trigger: CTGGGCTTGGGAGAAGAGCCATCCCAAGCCCAAGAC...AACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | AAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTCCTTaGGGTCCTGAGGCTTGCAGGTTTCACAGGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPCVGTCLPGP*GPEACRFHRGG Trigger: CCCGCCCCTGTGAAACCTGCAAGCCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | GGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTaGTATTCACCTGGCTGTCCCTGCTTGCTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFGASLGSCLAE*YSPGCPCLLSG Trigger: TCCAGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTCTGTATCTTCCCAGATaGTTGAGAGCTTCGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLQVGRVWGQPWQLPGRVLYLPR*LRASCR Trigger: TCTGCACGAAGCTCTCAAGCATCTGGGAAGATACAG...AACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCGGCCTCCTCTCCTGGGTACTGTCTCCCTGCCTAGCCGTGCTTGTTCCCTTGAGAATCATCCCTaGGCACACCTCCCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRPPLLGTVSLPSRACSLENHP*AHLPFC Trigger: ACAGAAAGGGAGGTGTGCCCAGGGATGATTCTCAAG...GGAACAAGCACGGCTAGGCAGGGAGACAGTACCCAGGAGAGGAGGCCGCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | GTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTaGGCACTTGCCTCCCGGGTCCTTTGGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSGCQEGNCLV*ALASRVLWVLR Trigger: CCTCAGGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | CTAGTGTCCTGTCAGGGTGTCAAGAAGGAAACTGCCTaGTGTTGGCACTTGCCTCCCGGGTCCTTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSCQGVKKETA*CWHLPPGSFGS Trigger: GGACCCAAAGGACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGGACACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCAGGGTGTCAAGAAGGAAACTGCCTTGTGTTGGCACTTGCCTCCCGGGTGACCCTGTTCATGTCTaGCACTGTTCTCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVRVSRRKLPCVGTCLPGDPVHV*HCSPLL Trigger: GAGGAGAGGAGAACAGTGTCAGACATGAACAGGGTC...ACCCGGGAGGCAAGTGCCAACACAAGGCAGTTTCCTTCTTGACACCCTGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCACAAGGGATTACCACTGTAGGGTGGCCTTGCCCTATTCTGGCACAGGATATAGCAGCTCCTCTCTaGACCCCTAGTGGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQGITTVGWPCPILAQDIAAPL*TPSGLP Trigger: TGGGAGGCCACTAGGGGTTCAGAGAGGAGCTGCTAT...ATCCTGTGCCAGAATAGGGCAAGGCCACCCTACAGTGGTAATCCCTTGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTTGGTTATGGGTGGCAGATGGCCTCCCTTTCTGTGCTaGCCTCTCCTCCTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEMAFSVMSTCLVMGGRWPPFLC*PLLLWR Trigger: CCGCCACAGGAGGAGAGGCCAGCACAGAAAGGGAGG...CCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGATGGTGGGTAAGCACGTGATGGGGGAAGGGACTCACTGGACAGCTGGGGACCCAGAAATCTGCTaGTATAGTCGTTTTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLMVGKHVMGEGTHWTAGDPEIC*YSRFGR Trigger: CCTACCAAAACGACTATATCAGCAGATTTCTGGGTC...CCCAGCTGTCCAGTGAGTCCCTTCCCCCATCACGTGCTTACCCACCATCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGACCCTGGGATTGATATaGTGTTCCCAGAAAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVWGQPWQLPGRVVFTWLTLGLI*CSQKRL Trigger: GAGTCTTTTCTGGGAACACCATATCAATCCCAGGGT...CAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| 3UTR CAA 72 bp | ACCCTTGAGATGGCCTTTTCTGTGATGTCCACCTGTTaGGTTATGGGTGGCAGATGGAGGATGGCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLEMAFSVMSTC*VMGGRWRMAPR Trigger: CCGAGGTGCCATCCTCCATCTGCCACCCATAACCAAACAGGTGGACATCACAGAAAAGGCCATCTCAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTCAACATCCATGGTTCCTGCTGGCTTCCAGACGGAGCTCAGGAACTCATCAGCATAGACCTCTaGGTGTTCAGATGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVNIHGSCWLPDGAQELISIDL*VFRCSP Trigger: GGGGGAGCATCTGAACACCCAGAGGTCTATGCTGAT...GAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTGCTTGCTCTCTGGAATTCTCCAGCAGCCCTGGACAAAAGAGAGCAGTCCACCAAAAAGGCCTaGGCATTTTCCTCCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLALWNSPAALDKREQSTKKA*AFSSLL Trigger: TAGGAGGGAGGAAAATGCCCAGGCCTTTTTGGTGGA...CTGCTCTCTTTTGTCCAGGGCTGCTGGAGAATTCCAGAGAGCAAGCAGGGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGTCAACATCCATGGTTCCTGCTGGCTTCCAGACGGAGCTCAGGAACTCATCTTCCCAGATGCTTaGGAGCTTCGTGCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVNIHGSCWLPDGAQELIFPDA*ELRAES Trigger: AGACTCTGCACGAAGCTCTCAAGCATCTGGGAAGAT...GAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCACAAGGGATTACCACTGTAGGGTGGCCTTGCCCTATTCTGGCACAGGATTGTTCTAGCAGAGGCTaGATCACTGCACCTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQGITTVGWPCPILAQDCSSRG*ITAPRV Trigger: GACTCTAGGTGCAGTGATGCAGCCTCTGCTAGAACA...ATCCTGTGCCAGAATAGGGCAAGGCCACCCTACAGTGGTAATCCCTTGTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGTCAACATCCATGGTTCCTGCTGGCTTCCAGACGGAGCTCAGGAACTCGCTCCTGATAAGCCTTaGAAAACTTCAGCTGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVNIHGSCWLPDGAQELAPDKP*KTSAGR Trigger: TCGCCCAGCTGAAGTTTTGCAAGGCTTATCAGGAGC...GAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAAGGGATTACCACTGTAGGGTGGCCTTGCCCTATTCTGGCACAGGATCTCACTACAGTCCTCTaGAATCCCCAGGATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSQGITTVGWPCPILAQDLTTVL*NPQDQH Trigger: ATGCTGATCCTGGGGATTCCAGAGGACTGTAGTGAG...ATCCTGTGCCAGAATAGGGCAAGGCCACCCTACAGTGGTAATCCCTTGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTAATTCTGCTTTCTTGTaGCTTGAGAATCATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSCLAELYSPGCPCLLSNSAFL*LENHPW Trigger: CCAGGGATGATTCTCAAGGCACAAGAAAGCAGAATT...AGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTTCTGTAACATCTCAGTaGTGTGTTCAAGCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSCLAELYSPGCPCLLSSVTSQ*CVQARN Trigger: ATTCCTGGCTTGAACACACCACTGAGATGTTACAGA...AGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGTTCTCTAGGGCTTTTTaGAGCAGGGTCTCCAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PYPCPVQVFLSQTEINRKFSRAF*SRVSKR Trigger: GCGTTTGGAGACCCTGCTCCAAAAAGCCCTAGAGAA...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCCTGCACAACTTGGTCTTGGGCTTaGGATGGCTCTTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TESSFCCSCLLTQNLSCTTWSWA*DGSSPK Trigger: CTTGGGAGAAGAGCCATCCCAAGCCCAAGACCAAGT...TGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTCAACATCCATGGTTCCTGCTGGCTTCCAGACGGAGCTCAGGAACTCAGAAACTTTCTCTCCTaGCTCCTGATAAGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVNIHGSCWLPDGAQELRNFLS*LLISLA Trigger: TGCAAGGCTTATCAGGAGCCAGGAGAGAAAGTTTCT...GAGTTCCTGAGCTCCGTCTGGAAGCCAGCAGGAACCATGGATGTTGACAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGACAACCCTGTGGCAGGCTCCTCCACACCCCATATGGACTTGAAGTTGAAGAAATTCATCATCTaGATGAGGGGGTTTTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQDNPVAGSSTPHMDLKLKKFII*MRGFYN Trigger: GTTGTAAAACCCCCTCATTCAGATGATGAATTTCTT...CAACTTCAAGTCCATATGGGGTGTGGAGGAGCCTGCCACAGGGTTGTCTTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGCAGTGTACTCTGATATaGCCATCTTCCCCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: PYPCPVQVFLSQTEINRKQCTLI*PSSPQL Trigger: TAGTTGTGGGGAAGATGGCCATATCAGAGTACACTG...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCATGCCCAGTTCAGGTCTTCCTGTCCCAGACTGAAATCAATCGTAAGATAGTCAAAATCACGTaGAAGTTCCACCAAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PYPCPVQVFLSQTEINRKIVKIT*KFHQKG Trigger: GCCTTTTTGGTGGAACTTGCACGTGATTTTGACTAT...CTTACGATTGATTTCAGTCTGGGACAGGAAGACCTGAACTGGGCATGGGTAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCCTGCACATTCCTTCTATTTCCCTaGGCACCAAAGCATAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TESSFCCSCLLTQNLSCTFLLFP*APKHSQ Trigger: TTGACTATGCTTTGGTGCCCAGGGAAATAGAAGGAA...TGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTTACTTGGTCTTGGGCTaGGGATGGCTCTTCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLQVGRVWGQPWQLPGRVYLVLG*GWLFSQ Trigger: TTGGGAGAAGAGCCATCCCAAGCCCAAGACCAAGTA...AACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTCCAGGTCGGCAGGGTTTGGGGCCAGCCTTGGCAGCTGCCTGGCAGAGTTCCAATAACCCTGGGATaGATATGGTGTTCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLQVGRVWGQPWQLPGRVPITLG*IWCSQK Trigger: TTTCTGGGAACACCATATCAATCCCAGGGTTATTGG...AACTCTGCCAGGCAGCTGCCAAGGCTGGCCCCAAACCCTGCCGACCTGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTTATCTTCCCAGATGCTaGAGAGCTTCGTGCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSCLAELYSPGCPCLLSYLPRC*RASCRV Trigger: GACTCTGCACGAAGCTCTCAAGCATCTGGGAAGATA...AGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CCA 90 bp | AGCTTCGTGCAGAGTCTCCTCAAACTCATCCTCACTACAGTCCTCTaGAATCCCCAGGATCAGCATAGACCTCTGGGTGTTCAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFVQSLLKLILTTVL*NPQDQHRPLGVQML Trigger: GAGCATCTGAACACCCAGAGGTCTATGCTGATCCTGGGGATTCCAGAGGACTGTAGTGAGGATGAGTTTGAGGAGACTCTGCACGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTCTTTCTGCTGCTCCTGTTTGCTCACACAAAACCTGTCCTGCACACTCCTGCTTTCTTGTGCCTaGAGAATCATCCCTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ESSFCCSCLLTQNLSCTLLLSCA*RIIPGH Trigger: GTGCCCAGGGATGATTCTCAAGGCACAAGAAAGCAG...GAGTGTGCAGGACAGGTTTTGTGTGAGCAAACAGGAGCAGCAGAAAGAGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCAGCTGCCTGGCAGAGTTGTATTCACCTGGCTGTCCCTGCTTGCTCTCTCATAATTCTGCTTTCTaGTGCCTTGAGAATCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSCLAELYSPGCPCLLSHNSAF*CLENHP Trigger: GGGATGATTCTCAAGGCACAAGAAAGCAGAATTATG...AGAGAGCAAGCAGGGACAGCCAGGTGAATACAACTCTGCCAGGCAGCTGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS GCA 90 bp | TCCTCCCTCCTAAACATCCTGCCGATGATCCTGTATCTTCCCAGATaGTTGAGAGCTTCGTGCAGAGTCTCCTCAAACTCATCCTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLLNILPMILYLPR*LRASCRVSSNSSSL Trigger: TAGTGAGGATGAGTTTGAGGAGACTCTGCACGAAGCTCTCAAGCATCTGGGAAGATACAGGATCATCGGCAGGATGTTTAGGAGGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CCA 90 bp | GCCTCTTTTCTACCTCAGGTACCTGCCACATCTGTAACATCTCAGTaGTGTGTTCAAGCCAGGAATCGAAGGCCAATAACCCTGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFLPQVPATSVTSQ*CVQARNRRPITLGL Trigger: CAATCCCAGGGTTATTGGCCTTCGATTCCTGGCTTGAACACACCACTGAGATGTTACAGATGTGGCAGGTACCTGAGGTAGAAAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CCA 90 bp | TGGTTCACATTCTTTCGAGATATTGCATTTTTCTCTAGGGCTTTTTaGAGCAGGGTCTCCAAACGCACCACAAAGCTAGAAACTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WFTFFRDIAFFSRAF*SRVSKRTTKLETFS Trigger: AGAGAAAGTTTCTAGCTTTGTGGTGCGTTTGGAGACCCTGCTCCAAAAAGCCCTAGAGAAAAATGCAATATCTCGAAAGAATGTGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CAA 90 bp | CCCTTCTCCATTGCAGCCTGTCTCTTCTGTTTCACCAAGGTCCGGTaGGAAGGGTTAAAACAGTGTACTCTGATATGGCCATCTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PFSIAACLFCFTKVR*EGLKQCTLIWPSSP Trigger: TGGGGAAGATGGCCATATCAGAGTACACTGTTTTAACCCTTCCAACCGGACCTTGGTGAAACAGAAGAGACAGGCTGCAATGGAGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CCA 72 bp | CTACCTCAGGTACCTGCCACATCTGTAACATCTCAGTaGTGTGTTCAAGCCAGGAATCGAAGGCCAATAACC | + |
|
Preference number: 6 (lower is better) Translates to: LPQVPATSVTSQ*CVQARNRRPIT Trigger: GGTTATTGGCCTTCGATTCCTGGCTTGAACACACCACTGAGATGTTACAGATGTGGCAGGTACCTGAGGTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS CCA 72 bp | CTCCAAACGCACCACAAAGCTAGAAACTTTCTCTCCTaGCTCCTGATAAGCCTTGCAAAACTTCAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQTHHKARNFLS*LLISLAKLQLG Trigger: GCCCAGCTGAAGTTTTGCAAGGCTTATCAGGAGCCAGGAGAGAAAGTTTCTAGCTTTGTGGTGCGTTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
||
| CDS GCA 72 bp | CTAAACATCCTGCCGATGATCCTGTATCTTCCCAGATaGTTGAGAGCTTCGTGCAGAGTCTCCTCAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LNILPMILYLPR*LRASCRVSSNS Trigger: TGAGTTTGAGGAGACTCTGCACGAAGCTCTCAAGCATCTGGGAAGATACAGGATCATCGGCAGGATGTTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| CDS CAA 90 bp | CAGTGGTGTGTTCAAGCCAGGAATCGAAGGCCAATAACCCTGGGATaGATATGGTGTTCCCAGAAAAGACTCTTAGTTCTCGGTACAACA | + |
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Preference number: 6 (lower is better) Translates to: QWCVQARNRRPITLG*IWCSQKRLLVLGTT Trigger: TGTTGTACCGAGAACTAAGAGTCTTTTCTGGGAACACCATATCAATCCCAGGGTTATTGGCCTTCGATTCCTGGCTTGAACACACCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| CDS CCA 72 bp | GCCAGGAATCGAAGGCCAATAACCCTGGGATTGATATaGTGTTCCCAGAAAAGACTCTTAGTTCTCGGTACA | + |
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Preference number: 6 (lower is better) Translates to: ARNRRPITLGLI*CSQKRLLVLGT Trigger: TGTACCGAGAACTAAGAGTCTTTTCTGGGAACACCATATCAATCCCAGGGTTATTGGCCTTCGATTCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| CDS CAA 72 bp | ATTGCAGCCTGTCTCTTCTGTTTCACCAAGGTCCGGTaGGAAGGGTTAAAACAGTGTACTCTGATATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: IAACLFCFTKVR*EGLKQCTLIWP Trigger: TGGCCATATCAGAGTACACTGTTTTAACCCTTCCAACCGGACCTTGGTGAAACAGAAGAGACAGGCTGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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| CDS CAA 72 bp | GTTTCAGGCGGGTCTGGTTCACATTCTTTCGAGATATaGCATTTTTCTCTAGGGCTTTTTGGAGCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VSGGSGSHSFEI*HFSLGLFGAGS Trigger: AGACCCTGCTCCAAAAAGCCCTAGAGAAAAATGCAATATCTCGAAAGAATGTGAACCAGACCCGCCTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060418.8 |
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